library(tidyverse)
library(calecopal)
library(ssdtools)
library(DT)
library(plotly)
library(gridExtra)
library(grid)
library(wesanderson)
library(ggdark)
library(broom)
library(knitr)
library(ggdark)
library(viridis)
library(ggpubr)
library(ggsci)
library(stringr)
library(skimr)
library(ggpmisc)
library(collapsibleTree)
library(gamlss)
library(gamlss.dist)
library(gamlss.add)
library(mixtools)
library(msm)

1 Hazard Concentration and Alignment Parameters

set.seed(1234) #reproducibility

###### Choose concentration alignment parameters####
alpha.stormwater <- 1.87
alpha.stormwater.sd <- 0.13
alpha.stormwater.n <- 22

alpha.marine <- 2.00 #based on SFEI dataset
alpha.marine.sd <- 0.15 #based on SFEI dataset
alpha.marine.n <- 23
#alpha.marine.rsd <- alpha.marine.se / alpha.marine

alpha.wastewater <- 1.58
alpha.wastewater.sd <- 0.11
alpha.wastewater.n <- 20

alpha.sediment <- 2.10
alpha.sediment.sd <- 0.12
alpha.sediment.n <- 17

alpha.fish <- 1.75
alpha.fish.sd <- 0.17
alpha.fish.n <- 15

#based on Kooi
alpha.freshwater = 2.64 #table s4 from Kooi et al 2021 for freshwater surface water. length


x2D_set = 5000 #100 #upper size range (microns)
x1D_set = 1 #1 #lower size range (microns)

#### Choose assessment factor (default = 1) ####
AF = 1

##### Choose hazard concentration and confidence intervals####
#particles/L
Threshold1 = 0.34 / AF
Threshold2 = 5.2 / AF
Threshold3 = 21.8 / AF
Threshold4 = 89.9 / AF

##### Food dilution thresholds (particles/L aligned to 1-5,000 um) ####
Threshold1_food = 0.34 / AF
Threshold2_food = 3.0 / AF
Threshold3_food = 5.0 / AF
Threshold4_food = 34 / AF
## 95% CI's ##
Threshold2_food_lcl = 0.34 / AF
Threshold2_food_hcl = 66 / AF
Threshold3_food_lcl = 0.4 / AF
Threshold3_food_hcl = 220 / AF
Threshold4_food_lcl = 2.5 / AF
Threshold4_food_hcl = 860 / AF


#Oxidative stress thresholds (particles/L aligned to 1-5,000 um)
Threshold1_oxidative.stress = 60 / AF
Threshold2_oxidative.stress = 320 / AF
Threshold3_oxidative.stress = 890 / AF
Threshold4_oxidative.stress = 4100 / AF
# print table
kable(data.frame(
  Category = c("Hazard Concentrations (particles/L)"),
  "Threshold1" = Threshold1,
  "Threshold 2" = Threshold2,
  "Threshold 3" = Threshold3,
  "Threshold 4" = Threshold4))
Category Threshold1 Threshold.2 Threshold.3 Threshold.4
Hazard Concentrations (particles/L) 0.34 5.2 21.8 89.9
#print table of sizes
kable(data.frame(
  Category = c("Concentration Alignment Parameters"),
  "Marine Alpha" = alpha.marine,
  "Freshwater Alpha" = alpha.freshwater,
  "lower_size_range_microns" = x1D_set,
  "upper_size_range_microns" = x2D_set))
Category Marine.Alpha Freshwater.Alpha lower_size_range_microns upper_size_range_microns
Concentration Alignment Parameters 2 2.64 1 5000
#function to derive correction factor (CF) from Koelmans et al (equation 2)
CFfnx = function(a = alpha, #default alpha from Koelmans et al (2020)
                 x2D = x2D_set, #set detault values to convert ranges to (1-5,000 um) #5mm is upper defuault 
                 x1D = x1D_set, #1 um is lower default size
                 x2M, x1M){
  
  CF = (x2D^(1-a)-x1D^(1-a))/(x2M^(1-a)-x1M^(1-a))
  
  return(CF)
}
#verify it works (expected answer is 40.37)
#CFfnx(x1M = 333, x2M = 5000)

2 Data Preparation

To compare thresholds to concentrations observed in the environment, data from the following study is used:

Zhu, Xia, Keenan Munno, Jelena Grbic, Larissa Meghan Werbowski, Jacqueline Bikker, Annissa Ho, Edie Guo, et al. 2021. “Holistic Assessment of Microplastics and Other Anthropogenic Microdebris in an Urban Bay Sheds Light on Their Sources and Fate.” ACS ES&T Water, May, acsestwater.0c00292. https://doi.org/10.1021/acsestwater.0c00292.

2.1 Import

#data import
#SF bay data from Zhu et al (2021)
sfBay <- read.csv("data/SFBayData.csv", na.strings = "NA", stringsAsFactors = TRUE) %>%
  rename(sampleID = ï..sampleID,
          x1M = Min.particle.size.um,
         x2M = Max.particle.size.um) %>% 
  mutate(Sample.Type = "sample") %>% 
  mutate(Sampling.apparatus = case_when(
    Sampling.apparatus == "24-hr pipe" ~ "depth-integrated perisaltic pump",
    TRUE ~ as.character(Sampling.apparatus)))

2.2 Cleanup

2.2.1 Wet/Dry Annotation

…or we could annotate samples taken between November and March as wet and August-September as dry based on the reporting in this spreadsheet. The grab samples are also paired with the manta samples by ID, so we need to split and recombine lengthwise.

Sample #CB9-Manta-11 Jan 18 should be omitted due to non-representative nature (in tidal front) (looks like it’s already been removed?)

2.2.1.1 TRUE DATE MATCH

The following code only matches manta and grab that were collectyed on the same days.

#grab_with_dates <- read.csv("data/grab_with_dates.csv") %>% 
# rename(sampleID_closestDate = ï..sampleID_closestDate) %>% 

grab_with_dates <-  readxl::read_excel("data/grab_with_dates.xlsx") %>% 
  rename(x1M = Min.particle.size.um,
         x2M = Max.particle.size.um) %>% 
  mutate(Sample.Type = "sample")

# first replace the dash with space
grab_with_dates$newDates <- str_replace(grab_with_dates$Date_string,"-", " ")

#then concat the station code with date to get the sampleID
dates <- grab_with_dates %>% 
  mutate(sampleID = paste(Station.Code, newDates)) %>% 
  rename(grab_particles.L.blank.corrected = particles.L.blank.corrected) %>% 
  rename(x1M_grab = x1M,
         x2M_grab = x2M)

#join with other dataset
true_matches <- full_join(sfBay %>%  
                   filter(Sampling.apparatus == "Manta Trawl") %>% 
                   rename(manta_particles.L.blank.corrected = particles.L.blank.corrected,
                          x1M_manta = x1M,
                          x2M_manta = x2M,
                          latitude_manta = latitude,
                          longitude_manta = longitude),
                 dates,
                 by = "sampleID") %>% 
  dplyr::select(c(sampleID, latitude_grab, longitude_grab, latitude_manta, longitude_manta, Station.Code, manta_particles.L.blank.corrected, grab_particles.L.blank.corrected, x1M_grab, x2M_grab, x1M_manta, x2M_manta, match)) %>% 
  #annotate wet/dry
  mutate(season = case_when(grepl("Nov|Dec|Jan|Feb|Mar", sampleID, ignore.case = TRUE) ~ "wet",
                            grepl("Aug|Sep", sampleID, ignore.case = TRUE) ~ "dry"))

#investiage matches
true_matches %>% skim()
Data summary
Name Piped data
Number of rows 93
Number of columns 14
_______________________
Column type frequency:
character 6
factor 2
numeric 6
________________________
Group variables None

Variable type: character

skim_variable n_missing complete_rate min max empty n_unique whitespace
sampleID 0 1.00 9 44 0 93 0
latitude_grab 44 0.53 4 8 0 48 0
longitude_grab 44 0.53 4 10 0 48 0
Station.Code 44 0.53 3 37 0 30 0
match 44 0.53 1 1 0 2 0
season 0 1.00 3 3 0 2 0

Variable type: factor

skim_variable n_missing complete_rate ordered n_unique top_counts
latitude_manta 35 0.62 FALSE 35 37.: 4, 37.: 3, 37.: 3, 38.: 3
longitude_manta 35 0.62 FALSE 38 -12: 4, -12: 3, -12: 3, -12: 3

Variable type: numeric

skim_variable n_missing complete_rate mean sd p0 p25 p50 p75 p100 hist
manta_particles.L.blank.corrected 35 0.62 0.00 0.01 0 0.00 0.00 0.00 0.06 ▇▁▁▁▁
grab_particles.L.blank.corrected 44 0.53 4.81 6.03 0 1.81 2.83 5.09 35.70 ▇▁▁▁▁
x1M_grab 44 0.53 50.00 0.00 50 50.00 50.00 50.00 50.00 ▁▁▇▁▁
x2M_grab 44 0.53 5000.00 0.00 5000 5000.00 5000.00 5000.00 5000.00 ▁▁▇▁▁
x1M_manta 35 0.62 333.00 0.00 333 333.00 333.00 333.00 333.00 ▁▁▇▁▁
x2M_manta 35 0.62 5000.00 0.00 5000 5000.00 5000.00 5000.00 5000.00 ▁▁▇▁▁
2.2.1.1.1 Match
#view matched data
my.formula <- y ~ x

match_plot_true_season <- true_matches %>% 
  drop_na(grab_particles.L.blank.corrected) %>% 
  filter(grab_particles.L.blank.corrected > 0) %>% #remove 0's that shouldn't belong
  ggplot(aes(x = manta_particles.L.blank.corrected, y = grab_particles.L.blank.corrected, color = season))+
  geom_point()+
  geom_smooth(method = "lm", se=FALSE, formula = my.formula) +
   stat_poly_eq(formula = my.formula, 
                aes(label = paste(..eq.label.., ..rr.label.., ..p.value.label.., sep = "~~~")), 
                parse = TRUE) +         
  scale_x_log10(name = "Manta Trawl blank-corrected particles/L",
                breaks = scales::trans_breaks("log10", function(x) 10^x),
        labels = scales::trans_format("log10", scales::math_format(10^.x))) +
  scale_y_log10(name = "1L-grab blank-corrected particles/L") +
  theme.type +
   theme(legend.position = c(0.75,0.92),
        legend.title = element_blank(),
        legend.background = element_blank(),
        legend.text = element_text(size = 12))


match_plot_true_overall <- true_matches %>% 
  drop_na(grab_particles.L.blank.corrected) %>% 
  filter(grab_particles.L.blank.corrected > 0) %>% #remove 0's that shouldn't belong
  ggplot(aes(x = manta_particles.L.blank.corrected, y = grab_particles.L.blank.corrected))+
  geom_point()+
  geom_smooth(method = "lm", se=FALSE, formula = my.formula) +
   stat_poly_eq(formula = my.formula, 
                aes(label = paste(..eq.label.., ..rr.label.., ..p.value.label.., sep = "~~~")), 
                parse = TRUE) +         
  scale_x_log10(name = "Manta Trawl blank-corrected particles/L",
                breaks = scales::trans_breaks("log10", function(x) 10^x),
        labels = scales::trans_format("log10", scales::math_format(10^.x))) +
  scale_y_log10(name = "1L-grab blank-corrected particles/L") +
  theme.type

ggarrange(match_plot_true_season, match_plot_true_overall)

2.2.1.2 CLOSEST DATE MATCH

The following code uses the nearest date to match manta and grab. In many cases, matches are one to several days apart.

2.2.1.2.1 Matched Manta and Grab
#remove grab samples that don't have dates
sfBay_noGrab <- sfBay %>% 
  filter(Sampling.apparatus != "1-L grab")

grab_with_dates_closest <- grab_with_dates %>% 
  dplyr::select(-c(Station.Code, newDates, particle_count, sample_volume_L, Date_string, match, needs_fixing)) %>% 
  rename("latitude" = "latitude_grab",
         "longitude" = "longitude_grab")

#see matches
closestMatches <- full_join(sfBay_noGrab, grab_with_dates_closest %>%
                       rename("grab_particles.L.blank.corrected" = particles.L.blank.corrected,
                              "sampleID" = "sampleID_closestDate"),
                     by = c("sampleID")) %>% 
  #annotate wet/dry
  mutate(season = case_when(grepl("Nov|Dec|Jan|Feb|Mar", sampleID, ignore.case = TRUE) ~ "wet",
                            grepl("Aug|Sep", sampleID, ignore.case = TRUE) ~ "dry"))

#view matched data
match_plot_closest_season <- closestMatches %>% 
  drop_na(grab_particles.L.blank.corrected) %>% 
  filter(grab_particles.L.blank.corrected > 0) %>% #remove 0's that shouldn't belong
  ggplot(aes(x = particles.L.blank.corrected, y = grab_particles.L.blank.corrected, color = season))+
  geom_point()+
  geom_smooth(method = "lm", se=FALSE, formula = my.formula) +
   stat_poly_eq(formula = my.formula, 
                aes(label = paste(..eq.label.., ..rr.label.., ..p.value.label.., sep = "~~~")), 
                parse = TRUE) +         
  scale_x_log10(name = "Manta Trawl blank-corrected particles/L",
                breaks = scales::trans_breaks("log10", function(x) 10^x),
        labels = scales::trans_format("log10", scales::math_format(10^.x))) +
  scale_y_log10(name = "1L-grab blank-corrected particles/L") +
  theme.type +
     theme(legend.position = c(0.7,0.92),
        legend.title = element_blank(),
        legend.background = element_blank(),
        legend.text = element_text(size = 12))

#view matched data overall
match_plot_closest <- closestMatches %>% 
  drop_na(grab_particles.L.blank.corrected) %>% 
  filter(grab_particles.L.blank.corrected > 0) %>% #remove 0's that shouldn't belong
  ggplot(aes(x = particles.L.blank.corrected, y = grab_particles.L.blank.corrected))+
  geom_point()+
  geom_smooth(method = "lm", se=FALSE, formula = my.formula) +
   stat_poly_eq(formula = my.formula, 
                aes(label = paste(..eq.label.., ..rr.label.., ..p.value.label.., sep = "~~~")), 
                parse = TRUE) +         
  scale_x_log10(name = "Manta Trawl blank-corrected particles/L",
                breaks = scales::trans_breaks("log10", function(x) 10^x),
        labels = scales::trans_format("log10", scales::math_format(10^.x))) +
  scale_y_log10(name = "1L-grab blank-corrected particles/L") +
  theme.type +
     theme(legend.position = c(0.7,0.92),
        legend.title = element_blank(),
        #legend.background = element_rect(color = "black", fill = "white", linetype = "solid"),
        legend.text = element_text(size = 12))

ggarrange(match_plot_closest_season,match_plot_closest)

match_plots <- ggarrange(match_plot_true_overall, #match_plot_true_season,
          match_plot_closest, #match_plot_closest_season,
          labels = c("A", "B"),#, "C", "D"),
          ncol = 2,
          nrow = 1)

match_plots

ggsave(plot = match_plots,
       filename = "match_plots.jpeg",
       path = "output/figures/", 
       width = 9, height = 5, units = "in",
       bg = "white",
       dpi = 300)

2.3 Rbind

grab_with_dates_new <- grab_with_dates %>% 
  mutate(sampleID = paste(Station.Code, newDates, "grab")) %>% 
  dplyr::select(-c(Station.Code, newDates, particle_count, sample_volume_L, Date_string, match, needs_fixing, sampleID_closestDate)) %>% 
  rename("latitude" = "latitude_grab",
         "longitude" = "longitude_grab")

#bind
sfBay2 <- rbind(sfBay_noGrab, grab_with_dates_new) %>% 
  #annotate wet/dry
  mutate(season = case_when(grepl("Nov|Dec|Jan|Feb|Mar", sampleID, ignore.case = TRUE) ~ "wet",
                            grepl("Aug|Sep", sampleID, ignore.case = TRUE) ~ "dry"))

2.4 Plastic particle correction

10 particles were analyzed for every color/morphology combo. 68% of particles analyzed by Raman/FTIR were plastic in surface water and 23% in fish samples were plastic.

Site-specific polymer percentages are reported in Table S18 of Zhu et al (2021) https://pubs.acs.org/doi/10.1021/acsestwater.0c00292?goto=supporting-info Data from this table were imported into excel and are used to correct for plastic percentages in locaiton-specific compartments below. ### Read in Data

#read in table S18
site_polymer_percentages <-  readxl::read_excel("data/grab_with_dates.xlsx", sheet = "relative_abundances", na = "N/A") %>% mutate_if(is.character, as.factor)

#more granular particle data from CEDEN (for splitting manta and grab ONLY)
#SF bay data
particle.data <- readxl::read_xlsx("data/2020-09-08_MooreParticleData.xlsx")

particle.data.clean <- particle.data %>% 
  mutate_if(is.character,  as.factor) %>% 
  mutate(Size_um = 1000 * Length.mm) %>% 
  #extract matrices
  mutate(matrix = case_when(grepl("sediment", MatrixName) ~ "sediment",
                            grepl("runoff", MatrixName) ~ "runoff",
                            grepl("samplewater", MatrixName) ~ "samplewater",
                            grepl("tissue", MatrixName) ~ "tissue",
                            grepl("blankwater", MatrixName) ~ "blankwater",
                            grepl("effluent", MatrixName) ~ "effluent")) %>% 
    #remove duplicates 
  filter(!str_detect(SampleID, "DUP")) %>% 
  #annotate locations
  mutate(site = case_when(
    grepl("NB", SampleID,ignore.case = FALSE) ~ "North Bay",
    grepl("CB", SampleID,ignore.case = FALSE) ~ "Central Bay",
    grepl("SB10", SampleID,ignore.case = FALSE) ~ "South Bay",
    grepl("SB11", SampleID,ignore.case = FALSE) ~ "South Bay",
    grepl("SB12", SampleID,ignore.case = FALSE) ~ "South Bay",
    grepl("SB13", SampleID,ignore.case = FALSE) ~ "South Bay",
    grepl("LSB", SampleID,ignore.case = FALSE) ~ "Lower South Bay",
    grepl("NMS", SampleID,ignore.case = FALSE) ~ "National Marine Sanctuary",
    grepl("TB", SampleID,ignore.case = FALSE) ~ "Tomales Bay",
    grepl("SC", SampleID,ignore.case = FALSE) ~ "general",
    grepl("SUB", SampleID,ignore.case = FALSE) ~ "general",
    grepl("SOSL", SampleID,ignore.case = FALSE) ~ "general",
    grepl("SPB", SampleID,ignore.case = FALSE) ~ "general",
  )) %>% 
  replace_na(list(site = "general")) %>% 
  droplevels()
  
manta.data <- particle.data.clean %>% filter(SampleMatrix == "manta")
#examine completeness of locations assignments
skim(manta.data)
Data summary
Name manta.data
Number of rows 17079
Number of columns 11
_______________________
Column type frequency:
character 2
factor 6
numeric 3
________________________
Group variables None

Variable type: character

skim_variable n_missing complete_rate min max empty n_unique whitespace
matrix 0 1 11 11 0 1 0
site 0 1 7 25 0 5 0

Variable type: factor

skim_variable n_missing complete_rate ordered n_unique top_counts
SampleMatrix 0 1 FALSE 1 man: 17079, eff: 0, fis: 0, sed: 0
SampleID 0 1 FALSE 67 CB9: 4957, CB8: 2675, SB1: 877, SPB: 767
PlasticType 0 1 FALSE 39 Not: 14630, Pol: 776, Pol: 368, Pol: 266
MorphologicalCategory 0 1 FALSE 6 Fra: 7593, Fib: 6978, Foa: 1510, Fil: 481
Color 2 1 FALSE 17 Whi: 4069, Cle: 3636, Bla: 2420, Blu: 2234
MatrixName 0 1 FALSE 5 sam: 13178, sam: 1586, sam: 1180, sam: 1119

Variable type: numeric

skim_variable n_missing complete_rate mean sd p0 p25 p50 p75 p100 hist
Length.mm 11263 0.34 2.91 7.42 0.02 0.70 1.40 2.79 195 ▇▁▁▁▁
Width.mm 11281 0.34 0.94 3.46 0.00 0.03 0.36 0.73 117 ▇▁▁▁▁
Size_um 11263 0.34 2908.27 7420.60 19.00 703.00 1403.00 2794.25 195000 ▇▁▁▁▁

2.4.0.1 Manta data summarize

#get total particle counts per area
site_counts <- manta.data %>% 
  filter(PlasticType != "Not Characterized") %>% 
  group_by(site) %>% 
  summarize(total = n())
site_counts
## # A tibble: 5 x 2
##   site                      total
##   <chr>                     <int>
## 1 Central Bay                1371
## 2 general                     177
## 3 Lower South Bay             217
## 4 National Marine Sanctuary   361
## 5 South Bay                   323
#get site-specific manta frequencies
manta.polymer.percentages <- manta.data %>% 
  filter(PlasticType != "Not Characterized") %>% 
  group_by(site, PlasticType) %>% 
  summarize(count = n()) %>% 
  left_join(site_counts, by = "site") %>% 
  mutate(freq = 100 * count / total) %>% 
  arrange(desc(freq)) %>% 
  # annotate polymer types
   mutate(general = case_when(
    grepl("Unknown", PlasticType, ignore.case = TRUE) ~ "unknown",
    grepl("anthropogenic", PlasticType, ignore.case = TRUE) ~ "unknown",
    grepl("natural", PlasticType, ignore.case = TRUE) ~ "natural",
    PlasticType == "Non-Synthetic Fiber (cotton, silk, wool)" ~ "natural",
    PlasticType == "Wool" ~ "natural",
    PlasticType == "Cotton" ~ "natural",
    PlasticType == "Cellulosic" ~ "natural",
    PlasticType == "Glass" ~ "anthropogenic (not plastic)",
    PlasticType == "Asphalt" ~ "anthropogenic (not plastic)",
    PlasticType == "Not Characterized" ~ "Not Characterized"
    )) %>% 
  replace_na(list(general = "plastic"))
  

manta.polymer.percentages
## # A tibble: 131 x 6
## # Groups:   site [5]
##    site                      PlasticType   count total  freq general
##    <chr>                     <fct>         <int> <int> <dbl> <chr>  
##  1 Lower South Bay           Polyethylene     93   217  42.9 plastic
##  2 Central Bay               Polyethylene    453  1371  33.0 plastic
##  3 general                   Polyethylene     49   177  27.7 plastic
##  4 Lower South Bay           Polypropylene    60   217  27.6 plastic
##  5 South Bay                 Polyethylene     89   323  27.6 plastic
##  6 National Marine Sanctuary Polyethylene     92   361  25.5 plastic
##  7 Central Bay               Polypropylene   227  1371  16.6 plastic
##  8 Central Bay               Polystyrene     201  1371  14.7 plastic
##  9 South Bay                 Polyester        42   323  13.0 plastic
## 10 general                   Polyester        19   177  10.7 plastic
## # ... with 121 more rows

2.4.0.2 ANOVA to determine site-specific differences

manta.data.annotated <- manta.data %>%
    filter(!grepl("blank", SampleID, ignore.case = TRUE)) %>% #remove blanks
   # annotate polymer types
   mutate(general = case_when(
    grepl("Unknown", PlasticType, ignore.case = TRUE) ~ "unknown",
    grepl("anthropogenic", PlasticType, ignore.case = TRUE) ~ "unknown",
    grepl("natural", PlasticType, ignore.case = TRUE) ~ "natural",
    PlasticType == "Non-Synthetic Fiber (cotton, silk, wool)" ~ "natural",
    PlasticType == "Wool" ~ "natural",
    PlasticType == "Cotton" ~ "natural",
    PlasticType == "Cellulosic" ~ "natural",
    PlasticType == "Glass" ~ "anthropogenic (not plastic)",
    PlasticType == "Asphalt" ~ "anthropogenic (not plastic)",
    PlasticType == "Not Characterized" ~ "Not Characterized"
    )) %>% 
  replace_na(list(general = "plastic")) %>% 
  filter(PlasticType != "Not Characterized")

#get total IDed particle counts for each sample
manta.total.particles.sample <- manta.data.annotated %>% 
  group_by(SampleID) %>% 
  summarize(total.particles = n())

#get plastic particle count per sample (for ANOVA)
manta.sample.plastic.percentages <- manta.data.annotated %>% 
  filter(general == "plastic") %>% 
  group_by(SampleID, site) %>% 
  summarize(plastic.particles = n()) %>% 
#join with total particle count
  left_join(manta.total.particles.sample, by = "SampleID") %>% 
  mutate(freq = 100 * plastic.particles / total.particles)

#summarize for barploy
manta.site.plastic.percentages <- manta.sample.plastic.percentages %>% 
  filter(total.particles > 1) %>% 
  #get mean, SD, and N for plastic percentages within each location
  group_by(site) %>% 
  summarize(ave.proportion = mean(freq), sd.proportion = sd(freq), n.samples = n()) %>% 
  mutate(se.proportion = sd.proportion / sqrt(n.samples))

manta.site.plastic.percentages
## # A tibble: 5 x 5
##   site                      ave.proportion sd.proportion n.samples se.proportion
##   <chr>                              <dbl>         <dbl>     <int>         <dbl>
## 1 Central Bay                         68.8         21.1         19          4.84
## 2 general                             63.4         29.7          7         11.2 
## 3 Lower South Bay                     90.6          9.91         6          4.04
## 4 National Marine Sanctuary           72.5         28.0         18          6.60
## 5 South Bay                           81.0         14.1          8          4.98
write.csv(manta.site.plastic.percentages,
          "output/data/manta.site.plastic.percentages.csv")
2.4.0.2.1 GRAPH
manta.site.plastic.percentages.graph <- manta.site.plastic.percentages %>% 
  mutate(site_factor = fct_reorder(site, ave.proportion)) %>% 
  ggplot(aes(x  = ave.proportion, y = site_factor, fill = site_factor)) +
  geom_col() +
  geom_errorbarh(aes(xmax = ave.proportion + se.proportion, xmin = ave.proportion - se.proportion),
                 height = 0.6) +
  scale_x_continuous(name = "Plastic % of Sub-Sampled Particles (mean +- SE)",
                     limits = c(0,100),
                     labels = scales::percent_format(scale = 1)) +
  scale_fill_uchicago() +
  scale_y_discrete(labels = c("Miscellanious other \n locations",
                              "National Marine \n Sanctuary",
                              "Central Bay",
                              "South Bay",
                              "Lower South Bay"                              )) +
  theme.type +
  theme(legend.position = "none",
        axis.title.y = element_blank())

manta.site.plastic.percentages.graph

ggsave(plot = manta.site.plastic.percentages.graph,
       filename = "manta.site.plastic.percentages.graph.jpeg",
       path = "output/figures/", 
       width = 7, height = 5, units = "in",
       bg = "white",
       dpi = 300)
2.4.0.2.2 ANOVA
2.4.0.2.2.1 Locations

One-way anova for manta plastic proportion data between sites.

summary(aov(freq ~ site,
  data = manta.sample.plastic.percentages))
##             Df Sum Sq Mean Sq F value Pr(>F)
## site         4   3362   840.6   1.563  0.198
## Residuals   53  28497   537.7

Because the one-way anova is not significant, plastic particle proportion corrections should be applied generically instead of on a site-specific basis.

2.4.0.3 Plastic percentages for manta

manta.general.percentages <- manta.polymer.percentages %>% 
  group_by(general, site) %>% 
  summarize(proportion.manta = sum(freq))

manta.general.percentages
## # A tibble: 18 x 3
## # Groups:   general [4]
##    general                     site                      proportion.manta
##    <chr>                       <chr>                                <dbl>
##  1 anthropogenic (not plastic) Central Bay                          0.219
##  2 anthropogenic (not plastic) National Marine Sanctuary            0.277
##  3 anthropogenic (not plastic) South Bay                            0.310
##  4 natural                     Central Bay                         12.3  
##  5 natural                     general                             14.7  
##  6 natural                     Lower South Bay                      2.30 
##  7 natural                     National Marine Sanctuary           16.9  
##  8 natural                     South Bay                            6.81 
##  9 plastic                     Central Bay                         79.5  
## 10 plastic                     general                             63.3  
## 11 plastic                     Lower South Bay                     93.1  
## 12 plastic                     National Marine Sanctuary           65.1  
## 13 plastic                     South Bay                           77.7  
## 14 unknown                     Central Bay                          7.95 
## 15 unknown                     general                             22.0  
## 16 unknown                     Lower South Bay                      4.61 
## 17 unknown                     National Marine Sanctuary           17.7  
## 18 unknown                     South Bay                           15.2

2.4.1 PLASTIC CORRECTION

#long-wise
long_polymer <- site_polymer_percentages %>% 
  pivot_longer(-c(Sample.Type, Polymer), names_to = "location", values_to = "proportion") %>% 
  drop_na()

#ensure adds up to 100%
long_polymer %>% 
  group_by(location, Sample.Type) %>% 
  summarize(sum(proportion))
## # A tibble: 21 x 3
## # Groups:   location [6]
##    location      Sample.Type `sum(proportion)`
##    <chr>         <fct>                   <dbl>
##  1 CentralBay    Fish                      101
##  2 CentralBay    Sediment                  103
##  3 CentralBay    Storm                     101
##  4 CentralBay    Surface                    99
##  5 CentralBay    WWTP                      100
##  6 LowerSouthBay Fish                       99
##  7 LowerSouthBay Sediment                  100
##  8 LowerSouthBay Storm                     102
##  9 LowerSouthBay Surface                   100
## 10 LowerSouthBay WWTP                       99
## # ... with 11 more rows
#### Join with manta data
manta.polymer.simple <- manta.polymer.percentages %>%
  mutate(Sample.Type = "Surface (Manta Trawl)") %>% 
  rename(location = site,
         Polymer = PlasticType,
         proportion = freq) %>% 
  dplyr::select(c(Sample.Type, Polymer, location, proportion))


#full dataframe
polymer_site_matrices <- rbind(long_polymer, manta.polymer.simple) %>% 
  #dplyr::select(-c(general)) %>% 
  mutate(Sample.Type = case_when(Sample.Type == "Surface" ~ "Surface (1L-grab)",
                                 TRUE ~ as.character(Sample.Type))) %>% 
  mutate(Polymer = case_when(
    Polymer == "PP" ~ "Polypropylene",
    Polymer == "PU" ~ "Polyurethane",
    Polymer == "PVC" ~ "Polyvinyl chloride",
    Polymer == "PTFE" ~ "Polytetrafluoroethylene",
    Polymer == "PS" ~ "Polystyrene",
    Polymer == "PE" ~ "Polyethylene",
    Polymer == "ABS" ~ "Acrylonitrile butadiene styrene",
    Polymer == "Acrylic, acrylate" ~ "Acrylic",
    Polymer == "Cotton" ~ "Non-Synthetic Fiber (cotton, silk, wool)",
    Polymer == "Wool" ~ "Non-Synthetic Fiber (cotton, silk, wool)",
    Polymer == "Asphalt" ~ "Other anthropogenic (asphalt, wax)",
    Polymer == "Other anthropogenic (asphalt, rubber, paint, wax)"  ~ "Other anthropogenic (asphalt, wax)",
    Polymer == "Stearates, Lubricants, Waxes"  ~ "Stearates, Lubricants",
    TRUE ~ as.character(Polymer)
  )) %>% 
  #reclassigy upper level
   mutate(general = case_when(
    grepl("Unknown", Polymer, ignore.case = TRUE) ~ "unknown",
    grepl("anthropogenic", Polymer, ignore.case = TRUE) ~ "anthropogenic (not plastic)",
    grepl("natural", Polymer, ignore.case = TRUE) ~ "natural",
    Polymer == "Non-Synthetic Fiber (cotton, silk, wool)" ~ "natural",
    Polymer == "Wool" ~ "natural",
    Polymer == "Cotton" ~ "natural",
    Polymer == "Cellulosic" ~ "natural",
    Polymer == "Glass" ~ "anthropogenic (not plastic)",
    Polymer == "Asphalt" ~ "anthropogenic (not plastic)",
    Polymer == "Not Characterized" ~ "Not Characterized",
    Polymer == "Stearates, Lubricants" ~ "anthropogenic (not plastic)"
    )) %>% 
  replace_na(list(general = "plastic"))


levels(factor(polymer_site_matrices$Polymer))
##  [1] "Acrylic"                                        
##  [2] "Acrylonitrile butadiene styrene"                
##  [3] "Anthropogenic (cellulosic)"                     
##  [4] "Anthropogenic (protein base)"                   
##  [5] "Anthropogenic (synthetic)"                      
##  [6] "Anthropogenic (unknown base)"                   
##  [7] "Cellulose acetate"                              
##  [8] "Cellulosic"                                     
##  [9] "Copolymers"                                     
## [10] "Dimethylpolysiloxane"                           
## [11] "Ethylene/vinyl acetate copolymer"               
## [12] "Glass"                                          
## [13] "Inorganic natural material"                     
## [14] "Natural material (pumice, gelatin foam, starch)"
## [15] "No signal, unknown, poor spectra, unmatchable"  
## [16] "Non-Synthetic Fiber (cotton, silk, wool)"       
## [17] "Nylon"                                          
## [18] "Organic natural material"                       
## [19] "Other anthropogenic (asphalt, wax)"             
## [20] "Other plastics"                                 
## [21] "Paint"                                          
## [22] "Polyamide"                                      
## [23] "Polycaprolactone"                               
## [24] "Polycarbonate"                                  
## [25] "Polyester"                                      
## [26] "Polyethylene"                                   
## [27] "Polyethylene co-acrylic acid"                   
## [28] "Polyethylene terephthalate"                     
## [29] "Polyethylene/polypropylene copolymer"           
## [30] "Polypropylene"                                  
## [31] "Polystyrene"                                    
## [32] "Polystyrene/acrylic copolymer"                  
## [33] "Polytetrafluoroethylene"                        
## [34] "Polyurethane"                                   
## [35] "Polyvinyl acetate"                              
## [36] "Polyvinyl alcohol"                              
## [37] "Polyvinyl chloride"                             
## [38] "Rayon"                                          
## [39] "Rubber"                                         
## [40] "SEBS"                                           
## [41] "Silicone"                                       
## [42] "Stearates, Lubricants"                          
## [43] "Styrene copolymer"                              
## [44] "Unknown"                                        
## [45] "Unknown Potentially Rubber"
polymer_site_matrices 
## # A tibble: 656 x 5
##    Sample.Type       Polymer                         location proportion general
##    <chr>             <chr>                           <chr>         <dbl> <chr>  
##  1 Surface (1L-grab) Acrylonitrile butadiene styrene NorthBay          0 plastic
##  2 Surface (1L-grab) Acrylonitrile butadiene styrene Central~          0 plastic
##  3 Surface (1L-grab) Acrylonitrile butadiene styrene SouthBay          0 plastic
##  4 Surface (1L-grab) Acrylonitrile butadiene styrene LowerSo~          0 plastic
##  5 Surface (1L-grab) Acrylonitrile butadiene styrene NMS               0 plastic
##  6 Surface (1L-grab) Acrylic                         NorthBay          1 plastic
##  7 Surface (1L-grab) Acrylic                         Central~          1 plastic
##  8 Surface (1L-grab) Acrylic                         SouthBay          6 plastic
##  9 Surface (1L-grab) Acrylic                         LowerSo~          0 plastic
## 10 Surface (1L-grab) Acrylic                         NMS               3 plastic
## # ... with 646 more rows
#summarize
summary_proportions <-  polymer_site_matrices %>% 
  group_by(general, location, Sample.Type) %>% 
  summarize(freq_total = sum(proportion))
  
summary_proportions %>%  DT::datatable()

Collapse further to obtain plastic percentages by matrix x location

#recode
plastic_proportions <- summary_proportions %>% 
  filter(general == "plastic") %>% 
  mutate(proportion = freq_total/100) %>% 
  mutate(location_fix = case_when(
    location == "CentralBay" ~ "Central Bay",
    location == "LowerSouthBay" ~ "Lower South Bay",
    location == "NMS" ~ "National Marine Sanctuary",
    location == "NorthBay" ~ "North Bay",
    location == "SouthBay" ~ "South Bay",
    location == "TomalesBay" ~ "Tomales Bay",
    location == "Central Bay" ~ "Central Bay",
    location == "Lower South Bay" ~ "Lower South Bay",
    location == "National Marine Sanctuary" ~ "National Marine Sanctuary",
    location == "North Bay" ~ "North Bay",
    location == "South Bay" ~ "South Bay",
    location == "Tomales Bay" ~ "Tomales Bay")) %>% 
  replace_na(list(location_fix = "general")) %>% 
  mutate(locationMatrix = paste(location_fix, Sample.Type))  %>% 
  ungroup() 
  

#view
plastic_proportions
## # A tibble: 26 x 7
##    general location        Sample.Type       freq_total proportion location_fix 
##    <chr>   <chr>           <chr>                  <dbl>      <dbl> <chr>        
##  1 plastic Central Bay     Surface (Manta T~       78.3      0.783 Central Bay  
##  2 plastic CentralBay      Fish                    21        0.21  Central Bay  
##  3 plastic CentralBay      Sediment                44        0.44  Central Bay  
##  4 plastic CentralBay      Storm                   36        0.36  Central Bay  
##  5 plastic CentralBay      Surface (1L-grab)       62        0.62  Central Bay  
##  6 plastic CentralBay      WWTP                    36        0.36  Central Bay  
##  7 plastic general         Surface (Manta T~       58.8      0.588 general      
##  8 plastic Lower South Bay Surface (Manta T~       92.6      0.926 Lower South ~
##  9 plastic LowerSouthBay   Fish                    15        0.15  Lower South ~
## 10 plastic LowerSouthBay   Sediment                50        0.5   Lower South ~
## # ... with 16 more rows, and 1 more variable: locationMatrix <chr>

2.4.1.1 Site-specific Polymer Proportion Figure

propotion_heatmap <- plastic_proportions %>% 
  dplyr::select(c(location_fix, proportion, Sample.Type)) %>% 
  #filter(location_fix %in% c("Central Bay", "Lower South Bay")) %>% 
  ggplot(aes(y = location_fix, x = Sample.Type, fill = proportion)) +
  geom_tile() +
  scale_fill_viridis(name = "%Plastic of Sub-Sampled Particles",
                     discrete = FALSE,
                     limits = c(0,1),
                     labels = scales::percent_format(scale = 100)) +
  ylab("Location in SF Bay") +
  xlab("Compartment") +
  theme.type +
  theme(legend.position = "bottom",
    axis.title.x = element_blank(),
        axis.title.y = element_blank(),
        panel.grid.major = element_blank(),
    panel.grid.minor = element_blank(),
    legend.key.size = unit(1, 'cm'))

propotion_heatmap

2.4.1.2 General proportions

Polymer percentages are not available for all locations, so general proportions must be derived

general_proportions <- plastic_proportions %>% 
  group_by(Sample.Type) %>% 
  summarize(ave.prop = mean(proportion), sd.prop = sd(proportion), n.prop = n())

general_proportions
## # A tibble: 6 x 4
##   Sample.Type           ave.prop sd.prop n.prop
##   <chr>                    <dbl>   <dbl>  <int>
## 1 Fish                     0.178  0.0443      4
## 2 Sediment                 0.38   0.121       5
## 3 Storm                    0.468  0.115       4
## 4 Surface (1L-grab)        0.49   0.175       5
## 5 Surface (Manta Trawl)    0.743  0.132       5
## 6 WWTP                     0.283  0.0681      3
general_proportions_graph <- general_proportions %>% 
  ggplot(aes(x = ave.prop, y = Sample.Type, fill = Sample.Type)) +
  geom_col() +
  geom_errorbarh(aes(xmax = ave.prop + (sd.prop / sqrt(n.prop)), xmin = ave.prop -(sd.prop / sqrt(n.prop))),
                 height = 0.6) +
  scale_x_continuous(name = "Plastic % of Sub-Sampled Particles (mean +- SE)",
                     limits = c(0,1),
                     labels = scales::percent_format(scale = 100)) +
  scale_fill_futurama() +
  theme.type +
  theme(legend.position = "none",
        axis.title.y = element_blank())

general_proportions_graph

proportions_arranged <- ggarrange(general_proportions_graph,
                                  propotion_heatmap, 
                                  labels = c("A", "B"),
          ncol = 1,
          nrow = 2)

proportions_arranged

ggsave(plot = proportions_arranged,
       filename = "proportions_arranged.jpeg",
       path = "output/figures/", 
       width = 12, height = 9, units = "in",
       bg = "white",
       dpi = 300)

2.4.1.3 Export table

final_proportions <- rbind(plastic_proportions %>% 
        dplyr::select(c(locationMatrix, proportion)),
                      general_proportions %>% 
                        mutate(locationMatrix = paste("general", Sample.Type)) %>% 
                        rename(proportion = ave.prop) %>% 
                        dplyr::select(c(locationMatrix, proportion)))

#final_proportions

## export pretty table
pretty_proportions <- left_join(final_proportions, plastic_proportions, by = "locationMatrix") %>%
  dplyr::select(c(Sample.Type,  location_fix, proportion.x)) %>% 
  replace_na(list(location_fix = "general")) %>% 
  pivot_wider(names_from = location_fix, values_from = proportion.x, values_fn = list) %>% 
  unnest(cols = everything())

pretty_proportions
## # A tibble: 12 x 8
##    Sample.Type           `Central Bay` general `Lower South Ba~ `National Marin~
##    <chr>                         <dbl>   <dbl>            <dbl>            <dbl>
##  1 Surface (Manta Trawl)         0.783   0.588            0.926            0.645
##  2 Surface (Manta Trawl)         0.783   0.743            0.926            0.645
##  3 Fish                          0.21   NA                0.15            NA    
##  4 Sediment                      0.44   NA                0.5             NA    
##  5 Storm                         0.36   NA                0.63            NA    
##  6 Surface (1L-grab)             0.62   NA                0.72             0.34 
##  7 WWTP                          0.36   NA                0.23            NA    
##  8 <NA>                         NA       0.178           NA               NA    
##  9 <NA>                         NA       0.38            NA               NA    
## 10 <NA>                         NA       0.468           NA               NA    
## 11 <NA>                         NA       0.49            NA               NA    
## 12 <NA>                         NA       0.283           NA               NA    
## # ... with 3 more variables: North Bay <dbl>, South Bay <dbl>,
## #   Tomales Bay <dbl>
write.csv(pretty_proportions,
          "output/data/final_plastic_proportion.csv"
          )

2.4.2 One-Way ANOVA on Matrices

One-way ANOVA for plastic percentage of total particles between matrices

particle.data.annotated <- particle.data.clean %>% 
   # annotate polymer types
   mutate(general = case_when(
    grepl("Unknown", PlasticType, ignore.case = TRUE) ~ "unknown",
    grepl("anthropogenic", PlasticType, ignore.case = TRUE) ~ "unknown",
    grepl("natural", PlasticType, ignore.case = TRUE) ~ "natural",
    PlasticType == "Non-Synthetic Fiber (cotton, silk, wool)" ~ "natural",
    PlasticType == "Wool" ~ "natural",
    PlasticType == "Cotton" ~ "natural",
    PlasticType == "Cellulosic" ~ "natural",
    PlasticType == "Glass" ~ "anthropogenic (not plastic)",
    PlasticType == "Asphalt" ~ "anthropogenic (not plastic)",
    PlasticType == "Not Characterized" ~ "Not Characterized"
    )) %>% 
  replace_na(list(general = "plastic"))

particle.counts <- particle.data.annotated %>% 
  filter(general != "Not Characterized") %>% 
  group_by(SampleID) %>% 
  summarize(total.particle.count = n())


proportions_samples_allMatrices <- particle.data.annotated %>% 
  filter(general != "Not Characterized") %>% 
  #collapse levels of polymer types
  group_by(SampleID, SampleMatrix, general) %>% 
  summarize(count = n()) %>% 
  #only plastic
  filter(general == "plastic") %>% 
  #join with counts
  left_join(particle.counts, by = "SampleID") %>% 
  #get proportions
  mutate(proportion = count/total.particle.count)

#run ANOVA
proportion_matrix_aov <- aov(proportion ~ SampleMatrix, data = proportions_samples_allMatrices)
summary(proportion_matrix_aov)
##               Df Sum Sq Mean Sq F value Pr(>F)    
## SampleMatrix   4  9.459  2.3647   79.21 <2e-16 ***
## Residuals    228  6.807  0.0299                   
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1

2.4.2.1 Post-Hoc

tukey <- TukeyHSD(proportion_matrix_aov)

#save 
tukey.data <- as.data.frame(tukey$SampleMatrix)

write.csv(tukey.data,
          "output/data/tukey_data.csv")

tukey
##   Tukey multiple comparisons of means
##     95% family-wise confidence level
## 
## Fit: aov(formula = proportion ~ SampleMatrix, data = proportions_samples_allMatrices)
## 
## $SampleMatrix
##                   diff         lwr         upr     p adj
## fish-eff   -0.06782449 -0.17913572  0.04348674 0.4511920
## manta-eff   0.40914170  0.29195188  0.52633151 0.0000000
## sed-eff     0.05662999 -0.08662242  0.19988239 0.8131218
## sw-eff      0.10995464 -0.04104665  0.26095593 0.2682050
## manta-fish  0.47696619  0.40211707  0.55181531 0.0000000
## sed-fish    0.12445447  0.01314325  0.23576570 0.0198422
## sw-fish     0.17777913  0.05665800  0.29890026 0.0007032
## sed-manta  -0.35251171 -0.46970153 -0.23532190 0.0000000
## sw-manta   -0.29918706 -0.42573188 -0.17264224 0.0000000
## sw-sed      0.05332465 -0.09767664  0.20432594 0.8679628

2.4.2.2 Location and matrix

proportions_samples_allMatrices_summary <- proportions_samples_allMatrices %>% 
  group_by(SampleMatrix) %>% 
  summarize(ave.proportion = mean(proportion),
            sd.proportion = sd(proportion),
            n.proportion = n()) 
write.csv(proportions_samples_allMatrices_summary,
          "output/data/proportions_samples_allMatrices_summary.csv")

proportions_samples_allMatrices_summary
## # A tibble: 5 x 4
##   SampleMatrix ave.proportion sd.proportion n.proportion
##   <fct>                 <dbl>         <dbl>        <int>
## 1 eff                   0.310         0.183           22
## 2 fish                  0.243         0.119          106
## 3 manta                 0.720         0.243           65
## 4 sed                   0.367         0.141           22
## 5 sw                    0.420         0.160           18

2.4.3 Breakdown of poylmers in categories

2.4.3.0.1 Collapsible Tree
tree <- polymer_site_matrices %>%
  group_by(general, Polymer) %>% 
  #summarize("AveProportion" =mean(proportion)) %>% 
  summarize("AveProportion" = paste0(round(mean(proportion),2),"%")) %>% 
  collapsibleTree(polymer_site_matrices,
                hierarchy = c("general", "Polymer"),#,"AveProportion"),
                width = 800,
                height = 1000,
                #zoomable = FALSE,
                #attribute = "AveProportion",
                fill = c(
                  # The root
                  "Category",
                  # Unique regions
                  rep("brown", length(unique(polymer_site_matrices$general))),
                  # Unique classes per region
                  rep("khaki", length(unique(paste(polymer_site_matrices$general, polymer_site_matrices$Polymer))))
                  ),
                root = "Category",
                fontSize = 13,
                collapsed = FALSE)


tree
htmltools::save_html(tree, file="output/figures/tree.html")
2.4.3.0.2 Stacked bar plot
specific_proportions <- polymer_site_matrices %>% 
  group_by(Sample.Type, general, Polymer) %>% 
  summarize(ave.prop = mean(proportion), sd.prop = sd(proportion))

specific_proportions
## # A tibble: 162 x 5
## # Groups:   Sample.Type, general [24]
##    Sample.Type general                     Polymer              ave.prop sd.prop
##    <chr>       <chr>                       <chr>                   <dbl>   <dbl>
##  1 Fish        anthropogenic (not plastic) Anthropogenic (synt~     4      1.41 
##  2 Fish        anthropogenic (not plastic) Other anthropogenic~     0      0    
##  3 Fish        natural                     Natural material (p~     0.5    0.577
##  4 Fish        natural                     Non-Synthetic Fiber~     9.5    1.73 
##  5 Fish        plastic                     Acrylic                  3.5    0.577
##  6 Fish        plastic                     Acrylonitrile butad~     0      0    
##  7 Fish        plastic                     Cellulose acetate        1.5    1.91 
##  8 Fish        plastic                     Copolymers               1.25   0.957
##  9 Fish        plastic                     Dimethylpolysiloxane     0      0    
## 10 Fish        plastic                     Nylon                    0      0    
## # ... with 152 more rows
specific_proportions_graph <- specific_proportions %>% 
  ggplot(aes(x = ave.prop, y = Sample.Type, fill = general)) +
  geom_col(position = "fill") +
  #geom_errorbarh(aes(xmax = ave.prop + sd.prop, xmin = ave.prop - sd.prop),
   #              height = 0.2,
    #             position = "identity") +
  scale_x_continuous(name = "Relative Percentages of % of Sub-Sampled Particles",
#                     limits = c(0,1),
                     labels = scales::percent_format(scale = 100)) +
  scale_fill_d3(name = "Particle Category") +
  theme.type +
  theme(legend.position = "bottom",
        legend.title = element_blank(),
        axis.title.y = element_blank(),
        legend.text = element_text(size = 14))

specific_proportions_graph

2.4.3.0.3 Stacked bar plot polymers
2.4.3.0.3.1 Collapse categories with few polymers
simple_polymer_summary <- polymer_site_matrices %>% 
  group_by(Sample.Type, general, Polymer) %>% 
  mutate(Polymer = as.character(Polymer)) %>% 
  summarize(ave.prop = mean(proportion), sd.prop = sd(proportion)) %>% 
  #group the low occuring plastics into "other"
  mutate(polymer_simple = case_when(ave.prop <= 1.3 ~ "Other plastics",
                                    ave.prop > 1.3 ~ Polymer)) %>% 
#re-summarize based on new collapsed categories
  group_by(polymer_simple, Sample.Type, general) %>% 
  summarize(prop = sum(ave.prop)) %>% 
  filter(general == "plastic")

simple_polymer_summary
## # A tibble: 45 x 4
## # Groups:   polymer_simple, Sample.Type [45]
##    polymer_simple    Sample.Type           general  prop
##    <chr>             <chr>                 <chr>   <dbl>
##  1 Acrylic           Fish                  plastic  3.5 
##  2 Acrylic           Sediment              plastic  3.6 
##  3 Acrylic           Storm                 plastic  2.25
##  4 Acrylic           Surface (1L-grab)     plastic  2.2 
##  5 Acrylic           Surface (Manta Trawl) plastic  4.93
##  6 Acrylic           WWTP                  plastic  2   
##  7 Cellulose acetate Fish                  plastic  1.5 
##  8 Cellulose acetate Sediment              plastic  3.8 
##  9 Cellulose acetate Storm                 plastic  8.5 
## 10 Copolymers        Sediment              plastic  1.4 
## # ... with 35 more rows
levels(factor(simple_polymer_summary$polymer_simple))
##  [1] "Acrylic"            "Cellulose acetate"  "Copolymers"        
##  [4] "Nylon"              "Other plastics"     "Paint"             
##  [7] "Polycarbonate"      "Polyester"          "Polyethylene"      
## [10] "Polypropylene"      "Polystyrene"        "Polyurethane"      
## [13] "Polyvinyl alcohol"  "Polyvinyl chloride"
#get color palette
library(RColorBrewer)
n <- 13#count(levels(factor(simple_polymer_summary$polymer_simple)))
qual_col_pals = brewer.pal.info[brewer.pal.info$category == 'qual',]
col_vector = unlist(mapply(brewer.pal, qual_col_pals$maxcolors, rownames(qual_col_pals)))
pie(rep(1,n), col=sample(col_vector, n))

specific_proportions_polymers_graph <- simple_polymer_summary %>% 
  filter(general %in% c("plastic")) %>% 
  ggplot(aes(x = prop, y = Sample.Type, fill = polymer_simple)) +
  geom_col(position = "fill") +
  #geom_errorbarh(aes(xmax = ave.prop + sd.prop, xmin = ave.prop - sd.prop),
   #              height = 0.2,
    #             position = "identity") +
 scale_x_continuous(name = "Relative Percentages of Identified Plastics",
#                   limits = c(0,100),
                  labels = scales::percent_format(scale = 100)) +
 scale_fill_manual(values = col_vector) +
  theme.type +
  theme(legend.position = "bottom",
        legend.title = element_blank(),
        legend.text = element_text(size = 14),
        axis.title.y = element_blank())

specific_proportions_polymers_graph

proportions_polymers_arranged <- ggarrange(specific_proportions_graph,
                                  specific_proportions_polymers_graph,
          labels = c("A", "B"),
          ncol = 1,
          nrow = 2)

proportions_polymers_arranged

ggsave(plot = proportions_polymers_arranged,
       filename = "proportions_arranged_polymers.jpeg",
       path = "output/figures/", 
       width = 10, height = 8, units = "in",
       bg = "white",
       dpi = 300)

2.5 FIBER CORRECTION

2.5.1 9 Samples with Fibers

2.5.1.1 Data cleanup

Chelsea sent a file that contains the 9 manta trawl samples with fibers. The goal here is to determine what percentage of particles were fibers in those manta trawl samples.

manta_with_fibers <-  readxl::read_excel("data/MantaWFibers.xlsx") %>% 
  janitor::clean_names() %>% 
  #SampleId is not present, so need to make a new one
  #sample CB8 was split into two, so collapse into one
  mutate(station_code = case_when(station_code == "CB8 2/2" ~ "CB8",
                                  TRUE ~ as.character(station_code))) %>% 
  mutate(sample_id = paste0(station_code, collection_date)) %>% 
  mutate(SampleType = "Surface Water (Manta Trawl; Fibers)")

#convert strings to lowercase
manta_with_fibers$category <- str_to_lower(manta_with_fibers$category)

# remove tailing blank space
 manta_with_fibers$category <- str_trim(manta_with_fibers$category, "right")

#convert to factor
manta_with_fibers <- manta_with_fibers %>% 
  mutate_if(is.character, as.factor)

#
levels(manta_with_fibers$category)
##  [1] "-"                            "anthropogenic (cellulosic)"  
##  [3] "anthropogenic (unknown base)" "fiber"                       
##  [5] "fiber bundle"                 "film"                        
##  [7] "film/frag"                    "film?"                       
##  [9] "foam"                         "fragment"                    
## [11] "pe"                           "pellet"                      
## [13] "pet"                          "polyacrylonitrile"           
## [15] "pp"                           "sphere"
#clean levels
manta_with_fibers <- manta_with_fibers %>% 
  filter(category %in% c("fiber", "film/frag", "fragment", "fiber bundle", 
                         "film?", "fragment", "pellet", "film", "foam", "sphere",
                         "pellet")) %>% 
  #fix different levels
  mutate(category = factor(case_when(
    category == "film/frag" ~ "fragment",
    category == "film?" ~ "film",
    category == "pellet" ~ "sphere",
    TRUE ~ as.character(category)
  )))

#ensure sensible levels
levels(manta_with_fibers$category)
## [1] "fiber"        "fiber bundle" "film"         "foam"         "fragment"    
## [6] "sphere"
skim(manta_with_fibers)
Data summary
Name manta_with_fibers
Number of rows 5665
Number of columns 14
_______________________
Column type frequency:
factor 13
numeric 1
________________________
Group variables None

Variable type: factor

skim_variable n_missing complete_rate ordered n_unique top_counts
station_code 0 1.00 FALSE 8 CB8: 2677, SB1: 1865, SB1: 363, SPB: 314
collection_date 0 1.00 FALSE 9 431: 2677, 431: 1865, 429: 363, 429: 265
collection_time 0 1.00 FALSE 9 0.5: 2677, 2:5: 1865, 0.5: 363, 3:2: 266
sample_type 0 1.00 FALSE 5 Fie: 3267, Fie: 1865, Fie: 266, fie: 219
length_mm 4439 0.22 FALSE 784 NA: 300, 6: 9, 5: 8, 7: 8
width_mm 4442 0.22 FALSE 445 NA: 300, 0.0: 90, 0.0: 35, 1.7: 24
plastic_type 5298 0.06 FALSE 44 PE: 76, PP: 66, Pol: 40, PS: 32
category 0 1.00 FALSE 6 fib: 3921, fra: 1354, foa: 227, fil: 81
color 0 1.00 FALSE 20 bla: 1130, blu: 965, cle: 804, dar: 725
raman_or_ftir 5404 0.05 FALSE 2 FTI: 254, Ram: 7, bla: 0, blu: 0
x12 5665 0.00 FALSE 0 FTI: 0, Ram: 0
sample_id 0 1.00 FALSE 9 CB8: 2677, SB1: 1865, SB1: 363, GFN: 265
SampleType 0 1.00 FALSE 1 Sur: 5665

Variable type: numeric

skim_variable n_missing complete_rate mean sd p0 p25 p50 p75 p100 hist
lab_sample_id 10 1 692.12 555.99 1 191 571 1143.5 1871 ▇▃▃▂▂

2.5.1.2 Summarize Shape Percentages OVERALL

## get total counts of particles per sample
totals_all <- manta_with_fibers %>% 
  drop_na(category) %>% 
  group_by(SampleType) %>% 
  summarize(total = n())

#determine which samples have fibers
shape_counts_all <- manta_with_fibers %>% 
  group_by(category, SampleType) %>% 
  summarize(n = n()) %>% 
  left_join(totals_all, by = "SampleType") %>% 
  mutate(proportion = n / total)

#plot per sample
total_manta_shapes <- shape_counts_all %>% 
  ggplot(aes(x = proportion, y = SampleType, fill = category)) + 
  geom_col(position = "fill") +
  scale_x_continuous(name = "Relative Fiber Percentages of % of Sub-Sampled Particles",
                     labels = scales::percent_format(scale = 100)) +
  scale_fill_d3(name = "Particle Category") +
  theme.type +
  theme(legend.position = "bottom",
        legend.title = element_blank(),
        axis.title.y = element_blank(),
        legend.text = element_text(size = 14))

total_manta_shapes

2.5.1.3 Summarize Shape Percentages by Sample

## get total counts of particles per sample
totals <- manta_with_fibers %>% 
  drop_na(category) %>% 
  group_by(sample_id) %>% 
  summarize(total = n())

#determine which samples have fibers
shape_counts <- manta_with_fibers %>% 
  group_by(station_code, sample_id, category) %>% 
  summarize(n = n()) %>% 
  left_join(totals, by = "sample_id") %>% 
  mutate(proportion = n / total)

shape_counts
## # A tibble: 37 x 6
## # Groups:   station_code, sample_id [9]
##    station_code sample_id         category         n total proportion
##    <fct>        <fct>             <fct>        <int> <int>      <dbl>
##  1 CB4          CB48.21.2017      fiber           84    89    0.944  
##  2 CB4          CB48.21.2017      fragment         5    89    0.0562 
##  3 CB8          CB843111          fiber         1406  2677    0.525  
##  4 CB8          CB843111          fiber bundle    43  2677    0.0161 
##  5 CB8          CB843111          film            47  2677    0.0176 
##  6 CB8          CB843111          foam           157  2677    0.0586 
##  7 CB8          CB843111          fragment      1014  2677    0.379  
##  8 CB8          CB843111          sphere          10  2677    0.00374
##  9 CBNMS22      CBNMS2209.12.2017 fiber           38    43    0.884  
## 10 CBNMS22      CBNMS2209.12.2017 film             2    43    0.0465 
## # ... with 27 more rows
#plot per sample
true_shape_graph_sample <- shape_counts %>% 
  filter(category == "fiber") %>% 
  ggplot(aes(x = proportion, y = sample_id)) + 
  geom_col() + #position = "fill") +
  scale_x_continuous(name = "Relative Fiber Percentages of % of Sub-Sampled Particles",
                     labels = scales::percent_format(scale = 100)) +
  scale_fill_d3(name = "Particle Category") +
  theme.type +
  theme(legend.position = "bottom",
        legend.title = element_blank(),
        axis.title.y = element_blank(),
        legend.text = element_text(size = 14))

true_shape_graph_sample

2.5.1.4 Averages

2.5.1.4.1 Barplot
shape.ave <- shape_counts %>% 
 # filter(category == "fiber") %>% 
  group_by(category) %>% 
  summarise(ave.prop = mean(proportion), sd.prop = sd(proportion), n.prop = 10) %>% 
  mutate(category = fct_reorder(factor(category), desc(ave.prop))) %>% 
  mutate(SampleType = "Surface Water (Manta Trawl; Fibers)")

shape.ave 
## # A tibble: 6 x 5
##   category     ave.prop sd.prop n.prop SampleType                         
##   <fct>           <dbl>   <dbl>  <dbl> <chr>                              
## 1 fiber         0.783   0.283       10 Surface Water (Manta Trawl; Fibers)
## 2 fiber bundle  0.00931 0.00610     10 Surface Water (Manta Trawl; Fibers)
## 3 film          0.0455  0.0532      10 Surface Water (Manta Trawl; Fibers)
## 4 foam          0.0293  0.0197      10 Surface Water (Manta Trawl; Fibers)
## 5 fragment      0.163   0.248       10 Surface Water (Manta Trawl; Fibers)
## 6 sphere        0.00834 0.00507     10 Surface Water (Manta Trawl; Fibers)
#plot
shape.bar <- shape.ave %>% 
  ggplot(aes(x = ave.prop, y = category, fill = category)) +
   geom_col() + #position = "fill") +
  geom_errorbarh(aes(xmin = ave.prop - sd.prop/sqrt(n.prop), xmax = ave.prop + sd.prop/sqrt(n.prop))) +
  scale_x_continuous(name = "Relative Shape Proportions of Sub-Sampled Particles \n in Manta Trawl with Counted Fibers",
                     labels = scales::percent_format(scale = 100)) +
  scale_fill_aaas(name = "Particle Category") +
  theme.type +
  theme(legend.position = "none",
        legend.title = element_blank(),
        axis.title.y = element_blank(),
        legend.text = element_text(size = 14),
        axis.title.x = element_text(size = 14),
        axis.text.y = element_text(size = 14))

shape.bar

#####Boxplot

shape.box <- shape_counts %>% 
  left_join(shape.ave, by = "category") %>% 
  mutate(category = fct_reorder(factor(category), desc(ave.prop))) %>% 
  ggplot(aes(x = proportion, y = category, fill = category)) +
  geom_boxplot(alpha = 0.8) +
  scale_x_continuous(name = "Relative Shape Proportions of Sub-Sampled Particles \n in Manta Trawl with Counted Fibers",
                     labels = scales::percent_format(scale = 100)) +
  scale_fill_aaas(name = "Particle Category") +
  theme.type +
  theme(legend.position = "none",
        legend.title = element_blank(),
        axis.title.y = element_blank(),
        legend.text = element_text(size = 16),
        axis.title.x = element_text(size = 14),
        axis.text.y = element_text(size = 14))

shape.box

manta_with_fibers_plots <- ggarrange(shape.box,shape.bar,
          labels = c("A", "B"),
          nrow = 2,
          common.legend = FALSE)

ggsave(plot = manta_with_fibers_plots,
       filename = "manta_with_fibers_plots.jpg",
       path = "output/figures/", 
       width = 8, height = 10, units = "in",
       bg = "white",
       dpi = 300)
2.5.1.4.2 Derive Fiber Correction Factor
fiber.correction.factor <- shape_counts %>% 
  filter(category == "fiber") %>%
  group_by() %>% 
  summarise(ave.fiber = mean(proportion), sd.fiber = sd(proportion), n.fiber = n())

fiber.correction.factor
## # A tibble: 1 x 3
##   ave.fiber sd.fiber n.fiber
##       <dbl>    <dbl>   <int>
## 1     0.783    0.283       9
2.5.1.4.3 Apply Fiber Correction Factor
# to correct for missing fibers in manta trawls, we take the inverse of 1 - proportion of fibers. For example, if 78% of fibers are removed from manta, the correction factor would be 4.54
fiber.correction = 1/(1 - as.numeric(fiber.correction.factor$ave.fiber[1]))
fiber.correction.sd = 1/(1 - as.numeric(fiber.correction.factor$sd.fiber[1]))
fiber.correction.n = as.numeric(fiber.correction.factor$n.fiber[1])

#sfbay2 <- 
sfBay2 <- sfBay2 %>% 
 #annotate fiber correction factor to dataset
  mutate(fiber.correction.factor = case_when(
    Sampling.apparatus == "Manta Trawl" ~ fiber.correction,
    TRUE ~ as.numeric(1))) %>% 
  mutate(fiber.correction.factor.sd = case_when(
    Sampling.apparatus == "Manta Trawl" ~ fiber.correction.sd)) %>% 
  mutate(fiber.correction.factor.n = case_when(
    Sampling.apparatus == "Manta Trawl" ~ fiber.correction.n)) %>% 
  ## multiply 
  mutate(particles.L.blank.corrected.fiber.corrected = 
           particles.L.blank.corrected * fiber.correction.factor)
  ## Uncertainty analysis ##
sfBay2$particles.L.blank.corrected.fiber.corrected
##   [1] 1.630000e+00 1.650000e+00 7.200000e+00 5.630000e+00 4.940000e+00
##   [6] 8.430000e+00 1.006000e+01 2.310000e+00 1.090000e+00 1.784000e+01
##  [11] 1.236000e+01 2.441000e+01 6.450000e-02 1.150000e-02 1.778000e-01
##  [16] 4.210000e-02 3.000000e-03 5.400000e-03 1.860000e-02 2.330000e-02
##  [21] 2.220000e-02 7.780000e-02 3.700000e-03 5.500000e-03 1.083000e-01
##  [26] 1.593000e-01 1.816000e-01 7.500000e-03 6.830000e-02           NA
##  [31]           NA           NA           NA           NA           NA
##  [36]           NA           NA           NA           NA           NA
##  [41]           NA           NA           NA           NA           NA
##  [46]           NA           NA           NA           NA           NA
##  [51]           NA           NA           NA           NA           NA
##  [56]           NA           NA           NA           NA           NA
##  [61]           NA           NA           NA           NA           NA
##  [66]           NA           NA           NA           NA           NA
##  [71]           NA           NA           NA           NA           NA
##  [76]           NA           NA           NA           NA           NA
##  [81]           NA           NA           NA           NA           NA
##  [86]           NA           NA           NA           NA           NA
##  [91]           NA           NA           NA           NA           NA
##  [96]           NA           NA           NA           NA           NA
## [101]           NA           NA           NA           NA           NA
## [106]           NA           NA           NA           NA           NA
## [111]           NA           NA           NA           NA           NA
## [116]           NA           NA           NA           NA           NA
## [121]           NA           NA           NA           NA           NA
## [126]           NA           NA           NA           NA           NA
## [131]           NA           NA           NA           NA           NA
## [136]           NA           NA           NA           NA           NA
## [141]           NA           NA           NA           NA           NA
## [146]           NA           NA           NA           NA           NA
## [151]           NA           NA           NA           NA           NA
## [156]           NA           NA           NA           NA           NA
## [161]           NA           NA           NA           NA           NA
## [166]           NA           NA           NA           NA           NA
## [171]           NA           NA           NA           NA           NA
## [176]           NA           NA           NA           NA           NA
## [181]           NA           NA           NA           NA           NA
## [186]           NA           NA           NA           NA           NA
## [191]           NA           NA           NA           NA           NA
## [196]           NA           NA           NA           NA           NA
## [201]           NA 1.057632e-04 2.811461e-02 2.018697e-03 8.681777e-03
## [206] 2.349782e-03 3.816671e-04 2.133657e-03 3.559161e-03 3.352233e-03
## [211] 1.041537e-02 1.997085e-02 8.644990e-04 2.556296e-01 4.046591e-04
## [216] 7.495391e-04 5.793983e-04 6.391775e-04 0.000000e+00 1.057632e-04
## [221] 1.002451e-03 9.196798e-05 3.632735e-04 6.391775e-04 3.586751e-04
## [226] 2.299200e-05 4.414463e-04 2.575103e-04 4.515628e-03 1.223174e-03
## [231] 1.641628e-03 1.140403e-03 7.035551e-04 2.372774e-03 1.820966e-03
## [236] 1.351929e-03 1.255363e-03 8.736958e-05 1.747392e-04 3.126911e-04
## [241] 2.483136e-04 1.747392e-04 3.126911e-04 1.103616e-04 5.150207e-04
## [246] 1.085222e-03 8.323102e-04 1.197883e-02 5.885951e-04 2.244019e-03
## [251] 1.333076e-02 6.364184e-03 1.958918e-03 2.713055e-04 4.230527e-04
## [256] 2.929180e-03 6.479144e-03 3.724703e-04 6.023903e-04 3.465347e+00
## [261] 2.734878e+00 7.433102e+00 6.277464e-01 1.950959e+00 4.984424e+00
## [266] 2.325107e+00 1.582779e+00 2.703562e+00 2.551020e+00 6.578947e+00
## [271] 1.871102e+01 3.000000e+00 1.640420e+00 8.671523e+00 6.523157e-01
## [276] 0.000000e+00 1.811594e+00 7.095745e-01 1.262626e+00 3.664755e+00
## [281] 3.098500e+00 1.279591e+00 7.619048e+00 2.412281e+00 1.357323e+01
## [286] 2.383222e+00 9.433962e-01 3.570315e+01 2.252599e+00 2.202268e+00
## [291] 1.605652e+00 4.269450e+00 3.502069e+00 1.876590e+01 6.298450e+00
## [296] 9.980040e-01 6.144393e+00 3.346080e+00 1.595745e+00 2.666667e+00
## [301] 4.338395e+00 9.931383e+00 3.333333e+00 2.833333e+00 5.086072e+00
## [306] 5.243089e+00 2.764613e+00 4.427577e+00

2.5.2 Using CEDEN Data

NOTE: This dataset contains 11 samples with fibers, while the rest do not. Alice’s blank-coprrected dataset EXCLUDES all fibers for manta trawl, so these data are NOT representative.

particle.data.clean.plastic <- particle.data.clean %>% 
  rename(Polymer = PlasticType) %>% 
  #annotate polymer types
   mutate(Polymer = case_when(
    Polymer == "PP" ~ "Polypropylene",
    Polymer == "PU" ~ "Polyurethane",
    Polymer == "PVC" ~ "Polyvinyl chloride",
    Polymer == "PTFE" ~ "Polytetrafluoroethylene",
    Polymer == "PS" ~ "Polystyrene",
    Polymer == "PE" ~ "Polyethylene",
    Polymer == "ABS" ~ "Acrylonitrile butadiene styrene",
    Polymer == "Acrylic, acrylate" ~ "Acrylic",
    Polymer == "Cotton" ~ "Non-Synthetic Fiber (cotton, silk, wool)",
    Polymer == "Wool" ~ "Non-Synthetic Fiber (cotton, silk, wool)",
    Polymer == "Asphalt" ~ "Other anthropogenic (asphalt, wax)",
    Polymer == "Other anthropogenic (asphalt, rubber, paint, wax)"  ~ "Other anthropogenic (asphalt, wax)",
    Polymer == "Stearates, Lubricants, Waxes"  ~ "Stearates, Lubricants",
    TRUE ~ as.character(Polymer)
  )) %>% 
  #reclassigy upper level
   mutate(general = case_when(
    grepl("Unknown", Polymer, ignore.case = TRUE) ~ "unknown",
    grepl("anthropogenic", Polymer, ignore.case = TRUE) ~ "anthropogenic (not plastic)",
    grepl("natural", Polymer, ignore.case = TRUE) ~ "natural",
    Polymer == "Non-Synthetic Fiber (cotton, silk, wool)" ~ "natural",
    Polymer == "Wool" ~ "natural",
    Polymer == "Cotton" ~ "natural",
    Polymer == "Cellulosic" ~ "natural",
    Polymer == "Glass" ~ "anthropogenic (not plastic)",
    Polymer == "Asphalt" ~ "anthropogenic (not plastic)",
    Polymer == "Not Characterized" ~ "Not Characterized",
    Polymer == "Stearates, Lubricants" ~ "anthropogenic (not plastic)"
    )) %>% 
  replace_na(list(general = "plastic")) %>% 
  #remove everything other than plastic
  filter(general == "plastic") %>% 
  #relevel sample types
  mutate(Sample.Type = factor(case_when(SampleMatrix == "manta" ~ "Surface (Manta Trawl)",
                                 SampleMatrix == "sw" ~ "Surface (1L-grab)",
                                 SampleMatrix == "fish" ~ "Fish",
                                 SampleMatrix == "sed" ~ "Sediment",
                                 SampleMatrix == "eff" ~ "Storm")))

skim(particle.data.clean.plastic)
Data summary
Name particle.data.clean.plast…
Number of rows 3171
Number of columns 13
_______________________
Column type frequency:
character 4
factor 6
numeric 3
________________________
Group variables None

Variable type: character

skim_variable n_missing complete_rate min max empty n_unique whitespace
Polymer 0 1 5 39 0 34 0
matrix 0 1 6 11 0 6 0
site 0 1 7 25 0 6 0
general 0 1 7 7 0 1 0

Variable type: factor

skim_variable n_missing complete_rate ordered n_unique top_counts
SampleMatrix 0 1 FALSE 5 man: 1860, eff: 403, sw: 340, sed: 338
SampleID 0 1 FALSE 233 CB9: 578, LSB: 119, CB8: 102, CB4: 70
MorphologicalCategory 0 1 FALSE 6 Fra: 1208, Fib: 768, Sph: 402, Fil: 383
Color 2 1 FALSE 17 Cle: 746, Whi: 706, Blu: 432, Bla: 261
MatrixName 0 1 FALSE 18 sam: 1146, sam: 354, sed: 243, sam: 233
Sample.Type 0 1 FALSE 5 Sur: 1860, Sto: 403, Sur: 340, Sed: 338

Variable type: numeric

skim_variable n_missing complete_rate mean sd p0 p25 p50 p75 p100 hist
Length.mm 431 0.86 2.87 7.83 0 0.50 1.00 2.52 147.5 ▇▁▁▁▁
Width.mm 428 0.87 1.17 4.61 0 0.07 0.33 0.74 117.0 ▇▁▁▁▁
Size_um 431 0.86 2866.19 7828.37 0 500.75 997.00 2522.25 147500.0 ▇▁▁▁▁

2.5.2.1 Summarize Morphologies

2.5.2.1.1 Across ALL Samples
# get numbers for each sample.type
total_samples <- particle.data.clean.plastic %>% 
  filter(!grepl("blank", SampleID, ignore.case = TRUE)) %>% 
  #remove manta trawl because it doesn't reflect Zhu et al particle counts
  filter(Sample.Type != "Surface (Manta Trawl)") %>% 
  group_by(Sample.Type) %>% 
  summarize(total = n())

#total_samples 
# calculate proportions of shapes for each matrix
simple_shape_summary <- particle.data.clean.plastic %>% 
  filter(!grepl("blank", SampleID, ignore.case = TRUE)) %>% 
  filter(Sample.Type != "Surface (Manta Trawl)") %>% 
  group_by(Sample.Type, MorphologicalCategory) %>% 
  summarize(shape_count = n()) %>% 
  left_join(total_samples, by = "Sample.Type") %>% 
  mutate(proportion = shape_count / total) %>% 
  group_by(Sample.Type, MorphologicalCategory) %>% 
  summarize(ave.prop = mean(proportion), sd.prop = sd(proportion), n.prop = n())

simple_shape_summary
## # A tibble: 21 x 5
## # Groups:   Sample.Type [4]
##    Sample.Type MorphologicalCategory ave.prop sd.prop n.prop
##    <fct>       <fct>                    <dbl>   <dbl>  <int>
##  1 Fish        Fiber                  0.822        NA      1
##  2 Fish        Film                   0.0533       NA      1
##  3 Fish        Foam                   0.00444      NA      1
##  4 Fish        Fragment               0.116        NA      1
##  5 Fish        Sphere                 0.00444      NA      1
##  6 Sediment    Fiber                  0.275        NA      1
##  7 Sediment    Film                   0.134        NA      1
##  8 Sediment    Foam                   0.0627       NA      1
##  9 Sediment    Fragment               0.373        NA      1
## 10 Sediment    Sphere                 0.155        NA      1
## # ... with 11 more rows

Manta trawl count data in Zhu et al had fibers removed. Need to filter those out for manta before reporting.

#remove manta and fibers and count separately then re-join to other matrices
total.particle.manta <- particle.data.clean.plastic %>% 
  filter(!grepl("blank", SampleID, ignore.case = TRUE)) %>% 
  filter(Sample.Type == "Surface (Manta Trawl)") %>% 
  filter(!MorphologicalCategory %in% c("Fiber", "Fiber Bundle")) %>% 
   group_by(Sample.Type) %>% 
  summarize(total.count = n())

# calculate proportions of shapes for each matrix
shape_summary_manta_noFibers <- particle.data.clean.plastic %>% 
  filter(!grepl("blank", SampleID, ignore.case = TRUE)) %>% 
  filter(Sample.Type == "Surface (Manta Trawl)") %>% 
  filter(!MorphologicalCategory %in% c("Fiber", "Fiber Bundle")) %>% 
  group_by(MorphologicalCategory, Sample.Type) %>% 
  summarize(shape_count = n()) %>% 
  left_join(total.particle.manta, by = "Sample.Type") %>% 
  mutate(proportion = shape_count / total.count) %>% 
  group_by(Sample.Type, MorphologicalCategory) %>% 
  summarize(ave.prop = mean(proportion), sd.prop = sd(proportion), n.prop = n())

####prep manta trawl with fibers for joining with other data###
#get total count
manta_with_fibers_count <- manta_with_fibers %>% 
   filter(!grepl("blank", sample_type, ignore.case = TRUE)) %>% 
  rename(MorphologicalCategory = category,
        Sample.Type = SampleType) %>% 
  group_by(Sample.Type) %>% 
  summarize(total.particle.count = n())
  
#get shape proportions
shape_summary_manta_Fibers <- manta_with_fibers %>% 
   filter(!grepl("blank", sample_type, ignore.case = TRUE)) %>% 
  rename(MorphologicalCategory = category,
        Sample.Type = SampleType) %>% 
  group_by(Sample.Type, MorphologicalCategory) %>% 
  summarize(shape_count = n()) %>% 
  left_join(manta_with_fibers_count) %>% 
  mutate(proportion = shape_count / total.particle.count) %>% 
  group_by(Sample.Type, MorphologicalCategory) %>% 
  summarize(ave.prop = mean(proportion), sd.prop = sd(proportion), n.prop = n()) %>% 
  mutate(MorphologicalCategory = case_when(
    MorphologicalCategory == "sphere" ~ "Sphere",
    MorphologicalCategory == "film" ~ "Film",
    MorphologicalCategory == "foam" ~ "Foam",
    MorphologicalCategory == "fiber" ~ "Fiber",
    MorphologicalCategory == "fragment" ~ "Fragment",
    MorphologicalCategory == "fiber bundle" ~ "Fiber Bundle"
  ))
  

#join manta without fibers and other data
shape_summary <- rbind(simple_shape_summary, shape_summary_manta_noFibers, shape_summary_manta_Fibers)
shape_summary
## # A tibble: 31 x 5
## # Groups:   Sample.Type [6]
##    Sample.Type MorphologicalCategory ave.prop sd.prop n.prop
##    <fct>       <chr>                    <dbl>   <dbl>  <int>
##  1 Fish        Fiber                  0.822        NA      1
##  2 Fish        Film                   0.0533       NA      1
##  3 Fish        Foam                   0.00444      NA      1
##  4 Fish        Fragment               0.116        NA      1
##  5 Fish        Sphere                 0.00444      NA      1
##  6 Sediment    Fiber                  0.275        NA      1
##  7 Sediment    Film                   0.134        NA      1
##  8 Sediment    Foam                   0.0627       NA      1
##  9 Sediment    Fragment               0.373        NA      1
## 10 Sediment    Sphere                 0.155        NA      1
## # ... with 21 more rows
2.5.2.1.2 Proportions Ploit
specific_proportions_shapes_graph <- shape_summary %>% 
  mutate(Sample.Type = case_when(
    Sample.Type == "Surface (Manta Trawl)" ~ "Surface (Manta Trawl; Fibers Subtracted)",
    TRUE ~ as.character(Sample.Type)
  )) %>% 
  ggplot(aes(x = ave.prop, y = Sample.Type, fill = MorphologicalCategory)) +
  geom_col(position = "fill") +
  #geom_errorbarh(aes(xmax = ave.prop + sd.prop, xmin = ave.prop - sd.prop),
   #              height = 0.2,
    #             position = "identity") +
 scale_x_continuous(name = "Relative Percentages of Shapes of Confirmed Plastic Particles",
#                   limits = c(0,100),
                  labels = scales::percent_format(scale = 100)) +
 scale_fill_npg() +
  theme.type +
  theme(legend.position = "bottom",
        legend.title = element_blank(),
        legend.text = element_text(size = 16),
        axis.title.y = element_blank())

specific_proportions_shapes_graph

ggsave(plot = specific_proportions_shapes_graph,
       filename = "specific_proportions_shapes_graph.jpg",
       path = "output/figures/", 
       width = 8, height = 5, units = "in",
       bg = "white",
       dpi = 300)
2.5.2.1.3 Variability
# get sample count n
n_samples <- particle.data.clean.plastic %>% 
  filter(general == "plastic") %>% 
  filter(!grepl("blank", SampleID, ignore.case = TRUE)) %>% 
  filter(Sample.Type != "Surface (Manta Trawl)") %>% 
  group_by(Sample.Type) %>% 
  summarize(total = n_unique(SampleID))

#### Do for all except manta #####
# get numbers for each sample.type
total_samples <- particle.data.clean.plastic %>% 
  filter(general == "plastic") %>% 
  filter(!grepl("blank", SampleID, ignore.case = TRUE)) %>% 
  filter(Sample.Type != "Surface (Manta Trawl)") %>% 
  group_by(SampleID) %>% 
  summarize(total = n())

#total_samples 
# calculate proportions of shapes for each matrix
simple_shape_summary <- particle.data.clean.plastic %>% 
  filter(general == "plastic") %>% 
   filter(!grepl("blank", SampleID, ignore.case = TRUE)) %>% 
  filter(Sample.Type != "Surface (Manta Trawl)") %>% 
  group_by(Sample.Type, MorphologicalCategory, SampleID) %>% 
  summarize(shape_count = n()) %>% 
  left_join(total_samples, by = "SampleID") %>% 
  mutate(proportion = shape_count / total) %>% 
  group_by(Sample.Type, MorphologicalCategory) %>% 
  summarize(ave.prop = mean(proportion), sd.prop = sd(proportion), n.prop = n()) 

simple_shape_summary
## # A tibble: 21 x 5
## # Groups:   Sample.Type [4]
##    Sample.Type MorphologicalCategory ave.prop sd.prop n.prop
##    <fct>       <fct>                    <dbl>   <dbl>  <int>
##  1 Fish        Fiber                   0.921   0.183      89
##  2 Fish        Film                    0.665   0.337      11
##  3 Fish        Foam                    1      NA           1
##  4 Fish        Fragment                0.576   0.311      20
##  5 Fish        Sphere                  0.167  NA           1
##  6 Sediment    Fiber                   0.377   0.243      20
##  7 Sediment    Film                    0.177   0.0936     11
##  8 Sediment    Foam                    0.0929  0.0355      8
##  9 Sediment    Fragment                0.396   0.160      19
## 10 Sediment    Sphere                  0.295   0.280      11
## # ... with 11 more rows
#### Do for only manta #####
# get numbers for each sample.type
manta.total.samples <- particle.data.clean.plastic %>% 
  filter(general == "plastic") %>% 
  filter(MorphologicalCategory != "Fiber") %>% 
  filter(!grepl("blank", SampleID, ignore.case = TRUE)) %>% 
  filter(Sample.Type == "Surface (Manta Trawl)") %>% 
  group_by(SampleID) %>% 
  summarize(total = n())

#total_samples 
# calculate proportions of shapes for each matrix
manta_shape_summary <- particle.data.clean.plastic %>% 
  filter(general == "plastic") %>% 
  filter(MorphologicalCategory != "Fiber") %>% 
   filter(!grepl("blank", SampleID, ignore.case = TRUE)) %>% 
  filter(Sample.Type == "Surface (Manta Trawl)") %>% 
  group_by(Sample.Type, MorphologicalCategory, SampleID) %>% 
  summarize(shape_count = n()) %>% 
  left_join(manta.total.samples, by = "SampleID") %>% 
  mutate(proportion = shape_count / total) %>% 
  group_by(Sample.Type, MorphologicalCategory) %>% 
  summarize(ave.prop = mean(proportion), sd.prop = sd(proportion), n.prop = n()) 
manta_shape_summary
## # A tibble: 5 x 5
## # Groups:   Sample.Type [1]
##   Sample.Type           MorphologicalCategory ave.prop sd.prop n.prop
##   <fct>                 <fct>                    <dbl>   <dbl>  <int>
## 1 Surface (Manta Trawl) Fiber Bundle             0.138   0.129      7
## 2 Surface (Manta Trawl) Film                     0.187   0.113     33
## 3 Surface (Manta Trawl) Foam                     0.230   0.119     32
## 4 Surface (Manta Trawl) Fragment                 0.660   0.247     57
## 5 Surface (Manta Trawl) Sphere                   0.163   0.100     30
average.shapes <- rbind(simple_shape_summary, manta_shape_summary)
average.shapes
## # A tibble: 26 x 5
## # Groups:   Sample.Type [5]
##    Sample.Type MorphologicalCategory ave.prop sd.prop n.prop
##    <fct>       <fct>                    <dbl>   <dbl>  <int>
##  1 Fish        Fiber                   0.921   0.183      89
##  2 Fish        Film                    0.665   0.337      11
##  3 Fish        Foam                    1      NA           1
##  4 Fish        Fragment                0.576   0.311      20
##  5 Fish        Sphere                  0.167  NA           1
##  6 Sediment    Fiber                   0.377   0.243      20
##  7 Sediment    Film                    0.177   0.0936     11
##  8 Sediment    Foam                    0.0929  0.0355      8
##  9 Sediment    Fragment                0.396   0.160      19
## 10 Sediment    Sphere                  0.295   0.280      11
## # ... with 16 more rows
2.5.2.1.4 Export data
### prep manta with fibers for binding
shape.ave_final <- shape.ave %>% 
  rename(MorphologicalCategory = category) %>% 
  rename(Sample.Type = SampleType) %>% 
  dplyr::select(c(Sample.Type, MorphologicalCategory, ave.prop, sd.prop, n.prop))

shape_summary_final <- average.shapes %>%
  mutate(Sample.Type = case_when(Sample.Type == "Surface (Manta Trawl)" ~ "Surface (Manta Trawl; no fibers)",
                                 TRUE ~ as.character(Sample.Type))) %>% 
  # join with fibers dataset
  rbind(shape.ave_final) %>% 
  mutate(se.prop = ave.prop / sqrt(sd.prop))

#convert all to lwoer case
shape_summary_final$MorphologicalCategory <- str_to_lower(shape_summary_final$MorphologicalCategory)

#easy formatting
shape_summary_final_pretty <- shape_summary_final %>% 
  mutate(prop = paste0(round(ave.prop * 100,0),
                      "% ± ",
                      round(sd.prop * 100,0),
                      "% (",
                      n.prop,
                      ")")) %>% 
  dplyr::select(c(Sample.Type, MorphologicalCategory, prop)) %>% 
#join with fiber manta trawl+
  pivot_wider(names_from = c(Sample.Type), values_from = prop)

shape_summary_final_pretty
## # A tibble: 6 x 7
##   MorphologicalCategory Fish   Sediment  Storm `Surface (1L-gr~ `Surface (Manta~
##   <chr>                 <chr>  <chr>     <chr> <chr>            <chr>           
## 1 fiber                 92% ±~ 38% ± 24~ 35% ~ 39% ± 15% (13)   <NA>            
## 2 film                  67% ±~ 18% ± 9%~ 17% ~ 15% ± 9% (13)    19% ± 11% (33)  
## 3 foam                  100% ~ 9% ± 4% ~ 14% ~ 9% ± 6% (6)      23% ± 12% (32)  
## 4 fragment              58% ±~ 40% ± 16~ 36% ~ 35% ± 13% (13)   66% ± 25% (57)  
## 5 sphere                17% ±~ 29% ± 28~ 19% ~ 5% ± 3% (3)      16% ± 10% (30)  
## 6 fiber bundle          <NA>   <NA>      <NA>  10% ± 3% (7)     14% ± 13% (7)   
## # ... with 1 more variable: Surface Water (Manta Trawl; Fibers) <chr>
write.csv(shape_summary_final_pretty,
          "output/data/shape_summary_final_pretty.csv")

2.5.3 PLASTIC CORRECTION FACTOR

Since ANOVA demonstrated no differences in location for manta, use overall percentages to correct data ##### Generic correction factor for manta trawl

manta.correction <- manta.sample.plastic.percentages %>% 
  group_by() %>% 
  summarize(proportion = mean(freq), sd.proportion = sd(freq), n.proportion = n()) %>% 
  mutate(se.proportion = sd.proportion/sqrt(n.proportion)) %>% 
  mutate(proportion.upper95 = proportion + 1.96*se.proportion,
         proportion.lower95 = proportion - 1.96*se.proportion)

manta.correction
## # A tibble: 1 x 6
##   proportion sd.proportion n.proportion se.proportion proportion.upper95
##        <dbl>         <dbl>        <int>         <dbl>              <dbl>
## 1       73.2          23.6           58          3.10               79.3
## # ... with 1 more variable: proportion.lower95 <dbl>
2.5.3.0.1 Site-specific for other matrices
##recode missing levels into generic (NA)
sfBay2_recode <- sfBay2 %>% 
  mutate(locationNew = case_when(
    general.location == "Central Bay" ~ "Central Bay",
    general.location == "South Bay" ~ "South Bay",
    general.location == "Lower South Bay" ~ "Lower South Bay",
    general.location == "National Marine Sancturay" ~ "National Marine Sanctuary",
    general.location == "Tomales Bay" ~ "Tomales Bay",
    general.location == "Treasure Island" ~ "general",
    general.location == "SPB" ~ "general",
    general.location == "SC" ~ "general",
    general.location == "SUB" ~ "general",
    general.location == "SOSL" ~ "general")) %>% 
  #cleanup
  replace_na(list(locationNew = "general")) %>% 
   #recode matrices
  mutate(matrix = case_when(
    sample.matrix == "fish" ~ "Fish",
    sample.matrix == "sediment" ~ "Sediment",
    sample.matrix.specific == "stormwater" ~ "Storm",
    sample.matrix.specific == "surface water" & Sampling.apparatus == "1-L grab" ~ "Surface (1L-grab)",
    sample.matrix.specific == "surface water" & Sampling.apparatus == "Manta Trawl" ~ "Surface (Manta Trawl)",
    sample.matrix.specific == "wastewater" ~ "WWTP")) %>% 
    #ID
  mutate(locationMatrix = factor(paste(locationNew, matrix)))

sfBay2_recode
##                                              sampleID
## 1                                  17-POC-438-125&355
## 2                                  17-POC-259-125&355
## 3                       20180406MMPStormSBCCMP125&355
## 4                                  17-POC-283-125&355
## 5                                  17-POC-515-125&355
## 6                                  17-POC-100-125&355
## 7                                  17-POC-130-125&355
## 8                                    17GR-003-125&355
## 9                       20180108MMPStormSBSMMP125&355
## 10                      20180108MMPStormCBMeek125&355
## 11                     20180108MMPStormCBEmery125&355
## 12                                 19-POC-198-125&355
## 13                                   EBDA Aug 31 2017
## 14                                  EBDA Sept 26 2017
## 15                                  EBMUD Aug 22 2017
## 16                                 EBMUD Sept 26 2017
## 17                                      PA Aug 1 2017
## 18                                  PA July 20 2017 A
## 19                                     SJ Aug 10 2017
## 20                                    SJ Sept 19 2017
## 21                                  SUNN Sept 19 2017
## 22                                  CCCSD Sept 7 2017
## 23                                   FSSD Aug 23 2017
## 24                                   FSSD Sept 7 2017
## 25                                  EBMUD Oct 20 2017
## 26                                   SFPUC Nov 6 2017
## 27                                   SFPUC Nov 7 2017
## 28                                   SUNN Oct 17 2017
## 29                                   CCCSD Dec 6 2017
## 30                                         AN LSB06_1
## 31                                         AN LSB06_2
## 32                                         AN LSB06_4
## 33                                         TS LSB06_1
## 34                                         TS LSB06_2
## 35                                         TS LSB06_3
## 36                                         TS LSB06_4
## 37                                         AN LSB06_3
## 38                                         TS LSB06_5
## 39                                         TS LSB06_6
## 40                                         TS LSB06_7
## 41                                         TS LSB06_8
## 42                                         TS LSB06_9
## 43                                        TS LSB06_10
## 44                                         AN TB101_1
## 45                                         AN TB101_2
## 46                                         AN TB101_3
## 47                                         AN TB101_4
## 48                                         AN TB101_5
## 49                                         AN TB101_6
## 50                                         AN TB101_7
## 51                                         AN TB101_8
## 52                                         AN TB101_9
## 53                                        AN TB101_10
## 54                                         AN TB102_1
## 55                                         AN TB102_2
## 56                                         AN TB102_3
## 57                                         AN TB102_4
## 58                                         AN TB102_5
## 59                                         AN TB102_6
## 60                                         AN TB102_7
## 61                                         AN TB102_8
## 62                                         AN TB102_9
## 63                                        AN TB102_10
## 64                                         TS TB101_1
## 65                                         TS TB101_2
## 66                                         TS TB101_3
## 67                                         TS TB101_4
## 68                                         TS TB101_5
## 69                                         TS TB101_6
## 70                                         TS TB101_7
## 71                                         TS TB101_8
## 72                                         TS TB101_9
## 73                                        TS TB101_10
## 74                                         TS CB106_1
## 75                                         TS CB106_2
## 76                                         TS CB106_3
## 77                                         TS CB106_4
## 78                                         TS CB106_5
## 79                                         TS CB106_6
## 80                                         TS CB106_7
## 81                                         TS CB106_8
## 82                                         TS CB106_9
## 83                                        TS CB106_10
## 84                                         AN CB106_1
## 85                                         AN CB106_2
## 86                                         AN CB106_3
## 87                                         AN CB106_4
## 88                                         AN CB106_5
## 89                                         AN CB106_6
## 90                                         AN CB106_7
## 91                                         AN CB106_8
## 92                                         AN CB106_9
## 93                                        AN CB106_10
## 94                                         AN CB010_1
## 95                                         AN CB010_2
## 96                                         AN CB010_4
## 97                                         AN CB010_3
## 98                                         AN CB010_5
## 99                                         AN CB010_6
## 100                                        AN CB010_7
## 101                                        AN CB010_8
## 102                                        AN CB010_9
## 103                                       AN CB010_10
## 104                                        TS CB010_1
## 105                                        TS CB010_2
## 106                                        TS CB010_3
## 107                                        TS CB010_4
## 108                                        TS CB010_5
## 109                                        TS CB010_6
## 110                                        TS CB010_7
## 111                                        TS CB010_8
## 112                                       AN SOSL40_1
## 113                                       AN SOSL40_2
## 114                                       AN SOSL40_3
## 115                                       AN SOSL40_4
## 116                                       AN SOSL40_5
## 117                                       AN SOSL40_6
## 118                                       AN SOSL40_7
## 119                                       AN SOSL40_8
## 120                                       AN SOSL40_9
## 121                                      AN SOSL40_10
## 122                                        AN SB074_1
## 123                                        AN SB074_2
## 124                                        AN SB074_3
## 125                                        AN SB074_4
## 126                                        AN SB074_5
## 127                                        AN SB074_6
## 128                                        AN SB074_7
## 129                                        AN SB074_8
## 130                                        AN SB074_9
## 131                                       AN SB074_10
## 132                                        TS SB074_1
## 133                                        TS SB074_2
## 134                                        TS SB074_3
## 135                                        TS SB074_4
## 136                                        TS SB074_5
## 137                                        TS SB074_6
## 138                                        TS SB074_7
## 139                                        TS SB074_8
## 140                                        TS SB074_9
## 141                                       TS SB074_10
## 142                                        AN CB037_1
## 143                                        AN CB037_2
## 144                                        AN CB037_3
## 145                                        AN CB037_4
## 146                                        AN CB037_5
## 147                                        AN CB037_6
## 148                                        AN CB037_7
## 149                                        AN CB037_8
## 150                                        AN CB037_9
## 151                                       AN CB037_10
## 152                                        TS CB037_1
## 153                                        TS CB037_2
## 154                                        TS CB037_3
## 155                                        TS CB037_4
## 156                                        TS CB037_5
## 157                                        TS CB037_6
## 158                                        TS CB037_7
## 159                                        TS CB037_8
## 160                                        TS CB037_9
## 161                                       TS CB037_10
## 162                                       TS SOSL40_1
## 163                                       TS SOSL40_2
## 164                                       TS SOSL40_3
## 165                                       TS SOSL40_4
## 166                                       TS SOSL40_5
## 167                                       TS SOSL40_6
## 168                                       TS SOSL40_7
## 169                                       TS SOSL40_8
## 170                                       TS SOSL40_9
## 171                                      TS SOSL40_10
## 172                                        TS TB102_1
## 173                                        TS TB102_2
## 174                                        TS TB102_3
## 175                                        TS TB102_4
## 176                                        TS TB102_5
## 177                                        TS TB102_6
## 178                                        TS TB102_7
## 179                                        TS TB102_8
## 180                                        TS TB102_9
## 181                                       TS TB102_10
## 182                                     RMP_14SC_1153
## 183                               15RMPMC_CB10_MP1
## 184                                  15RMPMC-CB15-MP1
## 185                                  15RMPMC_CB32_MP1
## 186                                15RMPC_CB37_MP1
## 187                                17MMP_S_LSB02_MP_1
## 188                                17MMP_S_LSB04_MP_1
## 189                                  17MMP-S-LSB06-MP
## 190                                  15RMP_14SC_1270 
## 191                                17MMP_S_SB051_MP_1
## 192                                  17MMP_SB056_MP_1
## 193                                17MMP_S_SB074_MP_1
## 194                               17MMP_S_SOSL16_MP_1
## 195                                17MMP_S_SOSL40_MP1
## 196                                 17MMP-S-SPB128-MP
## 197                                 17MMP_S_SPB15_MP1
## 198                                  17MMP-S-SUB52-MP
## 199                                  17MMP_S_SUB53_MP
## 200                                  17MMP_S_TB101_MP
## 201                                  17MMP_S_TB102_MP
## 202                                        CB4 Aug 21
## 203                           CB4 Richmond Bdg Nov 16
## 204                                        CB5 Aug 22
## 205                                        CB5 Nov 16
## 206                                         CB5 Nov 5
## 207                                        CB6 Aug 22
## 208                                        CB6 Nov 16
## 209                                    CB7 Aug 22 DUP
## 210                             CB7 Bay Bridge Nov 16
## 211                                        CB8 Aug 25
## 212                                        CB8 Jan 11
## 213                                        CB9 Aug 22
## 214                                  CB9 Jan 11 Total
## 215                                    CBNMS22 Mar 30
## 216                                   CBNMS22 Sept 12
## 217                                    CBNMS23 Mar 29
## 218                                   CBNMS23 Sept 12
## 219                                   CBNMS24 Sept 13
## 220                                    GFNMS24 Mar 29
## 221                                    GFNMS25 Mar 30
## 222                                   GFNMS25 Sept 11
## 223                                    GFNMS26 Mar 29
## 224                                   GFNMS26 Sept 12
## 225                                  GFNMS27 March 29
## 226                                   GFNMS27 Sept 13
## 227                                    GFNMS28 Mar 30
## 228                               GFNMS28 DUP Sept 13
## 229                                      LSB14 Aug 24
## 230                                       LSB14 Mar 6
## 231                                      LSB15 Aug 24
## 232                                       LSB15 Mar 6
## 233                                      LSB16 Aug 24
## 234                                       LSB16 Mar 6
## 235                               MBNMS29 Jan 11 2018
## 236                                    MBNMS29 Mar 30
## 237                               MBNMS29 Nov 17 2017
## 238                                   MBNMS29 Sept 13
## 239                                    MBNMS30 Mar 31
## 240                                   MBNMS30 Sept 27
## 241                                    MBNMS31 Mar 31
## 242                                   MBNMS31 Sept 27
## 243                                    MBNMS32 Mar 31
## 244                                   MBNMS32 Sept 27
## 245                                       SB10 Aug 23
## 246                                       SB10 Mar 19
## 247                                       SB11 Aug 23
## 248                                       SB11 Mar 19
## 249                                       SB12 Aug 23
## 250                                       SB12 Mar 19
## 251                                       SB13 Aug 23
## 252                                       SB13 Mar 19
## 253                    SF Bay Treasure Island Sept 18
## 254                                  SPB2 Aug 21 2017
## 255                                       SPB2 Nov 16
## 256                                       SPB3 Aug 21
## 257                                       SPB3 Nov 17
## 258                                       SUB1 Aug 21
## 259                                       SUB1 Nov 17
## 260                                   CB4 Aug 21 grab
## 261                                   CB4 Nov 22 grab
## 262                                   CB5 Aug 22 grab
## 263                                   CB5 Nov 22 grab
## 264                                   CB6 Aug 22 grab
## 265                                   CB6 Nov 22 grab
## 266                                   CB7 Aug 22 grab
## 267                                   CB7 Nov 22 grab
## 268                                   CB8 Aug 22 grab
## 269                                   CB8 Jan 11 grab
## 270                                   CB9 Aug 22 grab
## 271                                   CB9 Jan 22 grab
## 272                              CBNMS22 Sept 12 grab
## 273                               CBNMS23 Sep 22 grab
## 274                               CBNMS24 Sep 22 grab
## 275                         GFNMS/MBNMS29 Jan 22 grab
## 276                               GFNMS25 Mar 22 grab
## 277                              GFNMS25 Sept 11 grab
## 278                              GFNMS26 Sept 12 grab
## 279                               GFNMS27 Sep 22 grab
## 280               GFNMS28 (DUP for Manta) Sep 22 grab
## 281                                 LSB14 Mar 22 grab
## 282 LSB15 (corrected from LSB14 to LSB15) Mar 22 grab
## 283                                 LSB16 Aug 22 grab
## 284                                 LSB16 Mar 22 grab
## 285           MBNMS26 (GFNMS26 on bottle) Mar 22 grab
## 286                    MBNMS28 (GFNMS28?) Mar 22 grab
## 287                               MBNMS29 Mar 30 grab
## 288                               MBNMS29 Nov 22 grab
## 289                              MBNMS29 Sept 13 grab
## 290            MBNMS30 Mar 30 (Mar 31 for Manta) grab
## 291                               MBNMS30 Sep 22 grab
## 292                               MBNMS31 Mar 22 grab
## 293                               MBNMS31 Sep 22 grab
## 294                               MBNMS32 Mar 22 grab
## 295                               MBNMS32 Sep 22 grab
## 296                                  SB10 Aug 22 grab
## 297                                  SB10 Mar 22 grab
## 298                                  SB11 Aug 22 grab
## 299                                  SB11 Mar 22 grab
## 300                                  SB12 Mar 19 grab
## 301                                  SB13 Aug 23 grab
## 302                                  SB13 Mar 22 grab
## 303                             SPB2 Aug 21 2017 grab
## 304                                  SPB2 Nov 16 grab
## 305                                  SPB3 Aug 22 grab
## 306                                  SPB3 Nov 22 grab
## 307                                  SUB1 Aug 22 grab
## 308                                  SUB1 Nov 22 grab
##                            specific.location  System          general.location
## 1   Rodeo Creek at Seacliff Ct Pedestrian Br Estuary                      <NA>
## 2               Refugio Creek at Tsushima St Estuary                      <NA>
## 3                               Coyote Creek Estuary                      <NA>
## 4                 Colma Ck at S. Linden Blvd Estuary                      <NA>
## 5              Line 12K at Coliseum Entrance Estuary                      <NA>
## 6                Line 12F below PG&E station Estuary                      <NA>
## 7                   Line 12J at mouth to 12K Estuary                      <NA>
## 8             Guadalupe River at Highway 101 Estuary                      <NA>
## 9                            San Mateo Creek Estuary                      <NA>
## 10             Meeker Slough at Regatta Blvd Estuary                      <NA>
## 11                        MMP-Storm-CB-Emery Estuary                      <NA>
## 12                                  12M Rep1 Estuary                      <NA>
## 13                                      <NA> Estuary                      <NA>
## 14                                      <NA> Estuary                      <NA>
## 15                                      <NA> Estuary                      <NA>
## 16                                      <NA> Estuary                      <NA>
## 17                                      <NA> Estuary                      <NA>
## 18                                      <NA> Estuary                      <NA>
## 19                                      <NA> Estuary                      <NA>
## 20                                      <NA> Estuary                      <NA>
## 21                                      <NA> Estuary                      <NA>
## 22                                      <NA> Estuary                      <NA>
## 23                                      <NA> Estuary                      <NA>
## 24                                      <NA> Estuary                      <NA>
## 25                                      <NA> Estuary                      <NA>
## 26                                      <NA> Estuary                      <NA>
## 27                                      <NA> Estuary                      <NA>
## 28                                      <NA> Estuary                      <NA>
## 29                                      <NA> Estuary                      <NA>
## 30                                      <NA> Estuary           Lower South Bay
## 31                                      <NA> Estuary           Lower South Bay
## 32                                      <NA> Estuary           Lower South Bay
## 33                                      <NA> Estuary           Lower South Bay
## 34                                      <NA> Estuary           Lower South Bay
## 35                                      <NA> Estuary           Lower South Bay
## 36                                      <NA> Estuary           Lower South Bay
## 37                                      <NA> Estuary           Lower South Bay
## 38                                      <NA> Estuary           Lower South Bay
## 39                                      <NA> Estuary           Lower South Bay
## 40                                      <NA> Estuary           Lower South Bay
## 41                                      <NA> Estuary           Lower South Bay
## 42                                      <NA> Estuary           Lower South Bay
## 43                                      <NA> Estuary           Lower South Bay
## 44                                      <NA> Estuary               Tomales Bay
## 45                                      <NA> Estuary               Tomales Bay
## 46                                      <NA> Estuary               Tomales Bay
## 47                                      <NA> Estuary               Tomales Bay
## 48                                      <NA> Estuary               Tomales Bay
## 49                                      <NA> Estuary               Tomales Bay
## 50                                      <NA> Estuary               Tomales Bay
## 51                                      <NA> Estuary               Tomales Bay
## 52                                      <NA> Estuary               Tomales Bay
## 53                                      <NA> Estuary               Tomales Bay
## 54                                      <NA> Estuary               Tomales Bay
## 55                                      <NA> Estuary               Tomales Bay
## 56                                      <NA> Estuary               Tomales Bay
## 57                                      <NA> Estuary               Tomales Bay
## 58                                      <NA> Estuary               Tomales Bay
## 59                                      <NA> Estuary               Tomales Bay
## 60                                      <NA> Estuary               Tomales Bay
## 61                                      <NA> Estuary               Tomales Bay
## 62                                      <NA> Estuary               Tomales Bay
## 63                                      <NA> Estuary               Tomales Bay
## 64                                      <NA> Estuary               Tomales Bay
## 65                                      <NA> Estuary               Tomales Bay
## 66                                      <NA> Estuary               Tomales Bay
## 67                                      <NA> Estuary               Tomales Bay
## 68                                      <NA> Estuary               Tomales Bay
## 69                                      <NA> Estuary               Tomales Bay
## 70                                      <NA> Estuary               Tomales Bay
## 71                                      <NA> Estuary               Tomales Bay
## 72                                      <NA> Estuary               Tomales Bay
## 73                                      <NA> Estuary               Tomales Bay
## 74                                      <NA> Estuary               Central Bay
## 75                                      <NA> Estuary               Central Bay
## 76                                      <NA> Estuary               Central Bay
## 77                                      <NA> Estuary               Central Bay
## 78                                      <NA> Estuary               Central Bay
## 79                                      <NA> Estuary               Central Bay
## 80                                      <NA> Estuary               Central Bay
## 81                                      <NA> Estuary               Central Bay
## 82                                      <NA> Estuary               Central Bay
## 83                                      <NA> Estuary               Central Bay
## 84                                      <NA> Estuary               Central Bay
## 85                                      <NA> Estuary               Central Bay
## 86                                      <NA> Estuary               Central Bay
## 87                                      <NA> Estuary               Central Bay
## 88                                      <NA> Estuary               Central Bay
## 89                                      <NA> Estuary               Central Bay
## 90                                      <NA> Estuary               Central Bay
## 91                                      <NA> Estuary               Central Bay
## 92                                      <NA> Estuary               Central Bay
## 93                                      <NA> Estuary               Central Bay
## 94                                      <NA> Estuary               Central Bay
## 95                                      <NA> Estuary               Central Bay
## 96                                      <NA> Estuary               Central Bay
## 97                                      <NA> Estuary               Central Bay
## 98                                      <NA> Estuary               Central Bay
## 99                                      <NA> Estuary               Central Bay
## 100                                     <NA> Estuary               Central Bay
## 101                                     <NA> Estuary               Central Bay
## 102                                     <NA> Estuary               Central Bay
## 103                                     <NA> Estuary               Central Bay
## 104                                     <NA> Estuary               Central Bay
## 105                                     <NA> Estuary               Central Bay
## 106                                     <NA> Estuary               Central Bay
## 107                                     <NA> Estuary               Central Bay
## 108                                     <NA> Estuary               Central Bay
## 109                                     <NA> Estuary               Central Bay
## 110                                     <NA> Estuary               Central Bay
## 111                                     <NA> Estuary               Central Bay
## 112                                     <NA> Estuary                      <NA>
## 113                                     <NA> Estuary                      <NA>
## 114                                     <NA> Estuary                      <NA>
## 115                                     <NA> Estuary                      <NA>
## 116                                     <NA> Estuary                      <NA>
## 117                                     <NA> Estuary                      <NA>
## 118                                     <NA> Estuary                      <NA>
## 119                                     <NA> Estuary                      <NA>
## 120                                     <NA> Estuary                      <NA>
## 121                                     <NA> Estuary                      <NA>
## 122                                     <NA> Estuary                 South Bay
## 123                                     <NA> Estuary                 South Bay
## 124                                     <NA> Estuary                 South Bay
## 125                                     <NA> Estuary                 South Bay
## 126                                     <NA> Estuary                 South Bay
## 127                                     <NA> Estuary                 South Bay
## 128                                     <NA> Estuary                 South Bay
## 129                                     <NA> Estuary                 South Bay
## 130                                     <NA> Estuary                 South Bay
## 131                                     <NA> Estuary                 South Bay
## 132                                     <NA> Estuary                 South Bay
## 133                                     <NA> Estuary                 South Bay
## 134                                     <NA> Estuary                 South Bay
## 135                                     <NA> Estuary                 South Bay
## 136                                     <NA> Estuary                 South Bay
## 137                                     <NA> Estuary                 South Bay
## 138                                     <NA> Estuary                 South Bay
## 139                                     <NA> Estuary                 South Bay
## 140                                     <NA> Estuary                 South Bay
## 141                                     <NA> Estuary                 South Bay
## 142                                     <NA> Estuary               Central Bay
## 143                                     <NA> Estuary               Central Bay
## 144                                     <NA> Estuary               Central Bay
## 145                                     <NA> Estuary               Central Bay
## 146                                     <NA> Estuary               Central Bay
## 147                                     <NA> Estuary               Central Bay
## 148                                     <NA> Estuary               Central Bay
## 149                                     <NA> Estuary               Central Bay
## 150                                     <NA> Estuary               Central Bay
## 151                                     <NA> Estuary               Central Bay
## 152                                     <NA> Estuary               Central Bay
## 153                                     <NA> Estuary               Central Bay
## 154                                     <NA> Estuary               Central Bay
## 155                                     <NA> Estuary               Central Bay
## 156                                     <NA> Estuary               Central Bay
## 157                                     <NA> Estuary               Central Bay
## 158                                     <NA> Estuary               Central Bay
## 159                                     <NA> Estuary               Central Bay
## 160                                     <NA> Estuary               Central Bay
## 161                                     <NA> Estuary               Central Bay
## 162                                     <NA> Estuary                      SOSL
## 163                                     <NA> Estuary                      SOSL
## 164                                     <NA> Estuary                      SOSL
## 165                                     <NA> Estuary                      SOSL
## 166                                     <NA> Estuary                      SOSL
## 167                                     <NA> Estuary                      SOSL
## 168                                     <NA> Estuary                      SOSL
## 169                                     <NA> Estuary                      SOSL
## 170                                     <NA> Estuary                      SOSL
## 171                                     <NA> Estuary                      SOSL
## 172                                     <NA> Estuary               Tomales Bay
## 173                                     <NA> Estuary               Tomales Bay
## 174                                     <NA> Estuary               Tomales Bay
## 175                                     <NA> Estuary               Tomales Bay
## 176                                     <NA> Estuary               Tomales Bay
## 177                                     <NA> Estuary               Tomales Bay
## 178                                     <NA> Estuary               Tomales Bay
## 179                                     <NA> Estuary               Tomales Bay
## 180                                     <NA> Estuary               Tomales Bay
## 181                                     <NA> Estuary               Tomales Bay
## 182                                     <NA> Estuary                        SC
## 183                                     <NA> Estuary               Central Bay
## 184                                     <NA> Estuary               Central Bay
## 185                                     <NA> Estuary               Central Bay
## 186                                     <NA> Estuary               Central Bay
## 187                                     <NA> Estuary           Lower South Bay
## 188                                     <NA> Estuary           Lower South Bay
## 189                                     <NA> Estuary           Lower South Bay
## 190                                     <NA> Estuary                        SC
## 191                                     <NA> Estuary                 South Bay
## 192                                     <NA> Estuary                 South Bay
## 193                                     <NA> Estuary                 South Bay
## 194                                     <NA> Estuary                      SOSL
## 195                                     <NA> Estuary                      SOSL
## 196                                     <NA> Estuary                       SPB
## 197                                     <NA> Estuary                       SPB
## 198                                     <NA> Estuary                       SUB
## 199                                     <NA> Estuary                       SUB
## 200                                     <NA> Estuary               Tomales Bay
## 201                                     <NA> Estuary               Tomales Bay
## 202                                     <NA> Estuary               Central Bay
## 203                                     <NA> Estuary               Central Bay
## 204                                     <NA> Estuary               Central Bay
## 205                                     <NA> Estuary               Central Bay
## 206                                     <NA> Estuary               Central Bay
## 207                                     <NA> Estuary               Central Bay
## 208                                     <NA> Estuary               Central Bay
## 209                                     <NA> Estuary               Central Bay
## 210                                     <NA> Estuary               Central Bay
## 211                                     <NA> Estuary               Central Bay
## 212                                     <NA> Estuary               Central Bay
## 213                                     <NA> Estuary               Central Bay
## 214                                     <NA> Estuary               Central Bay
## 215                                     <NA> Estuary National Marine Sancturay
## 216                                     <NA> Estuary National Marine Sancturay
## 217                                     <NA> Estuary National Marine Sancturay
## 218                                     <NA> Estuary National Marine Sancturay
## 219                                     <NA> Estuary National Marine Sancturay
## 220                                     <NA> Estuary National Marine Sancturay
## 221                                     <NA> Estuary National Marine Sancturay
## 222                                     <NA> Estuary National Marine Sancturay
## 223                                     <NA> Estuary National Marine Sancturay
## 224                                     <NA> Estuary National Marine Sancturay
## 225                                     <NA> Estuary National Marine Sancturay
## 226                                     <NA> Estuary National Marine Sancturay
## 227                                     <NA> Estuary National Marine Sancturay
## 228                                     <NA> Estuary National Marine Sancturay
## 229                                     <NA> Estuary           Lower South Bay
## 230                                     <NA> Estuary           Lower South Bay
## 231                                     <NA> Estuary           Lower South Bay
## 232                                     <NA> Estuary           Lower South Bay
## 233                                     <NA> Estuary           Lower South Bay
## 234                                     <NA> Estuary           Lower South Bay
## 235                                     <NA> Estuary National Marine Sancturay
## 236                                     <NA> Estuary National Marine Sancturay
## 237                                     <NA> Estuary National Marine Sancturay
## 238                                     <NA> Estuary National Marine Sancturay
## 239                                     <NA> Estuary National Marine Sancturay
## 240                                     <NA> Estuary National Marine Sancturay
## 241                                     <NA> Estuary National Marine Sancturay
## 242                                     <NA> Estuary National Marine Sancturay
## 243                                     <NA> Estuary National Marine Sancturay
## 244                                     <NA> Estuary National Marine Sancturay
## 245                                     <NA> Estuary                 South Bay
## 246                                     <NA> Estuary                 South Bay
## 247                                     <NA> Estuary                 South Bay
## 248                                     <NA> Estuary                 South Bay
## 249                                     <NA> Estuary                 South Bay
## 250                                     <NA> Estuary                 South Bay
## 251                                     <NA> Estuary                 South Bay
## 252                                     <NA> Estuary                 South Bay
## 253                                     <NA> Estuary           Treasure Island
## 254                                     <NA> Estuary                       SPB
## 255                                     <NA> Estuary                       SPB
## 256                                     <NA> Estuary                       SPB
## 257                                     <NA> Estuary                       SPB
## 258                                     <NA> Estuary                       SUB
## 259                                     <NA> Estuary                       SUB
## 260                                     <NA> Estuary               Central Bay
## 261                                     <NA> Estuary               Central Bay
## 262                                     <NA> Estuary               Central Bay
## 263                                     <NA> Estuary               Central Bay
## 264                                     <NA> Estuary               Central Bay
## 265                                     <NA> Estuary               Central Bay
## 266                                     <NA> Estuary               Central Bay
## 267                                     <NA> Estuary               Central Bay
## 268                                     <NA> Estuary               Central Bay
## 269                                     <NA> Estuary               Central Bay
## 270                                     <NA> Estuary               Central Bay
## 271                                     <NA> Estuary               Central Bay
## 272                                     <NA> Estuary National Marine Sancturay
## 273                                     <NA> Estuary National Marine Sancturay
## 274                                     <NA> Estuary National Marine Sancturay
## 275                                     <NA> Estuary National Marine Sancturay
## 276                                     <NA> Estuary National Marine Sancturay
## 277                                     <NA> Estuary National Marine Sancturay
## 278                                     <NA> Estuary National Marine Sancturay
## 279                                     <NA> Estuary National Marine Sancturay
## 280                                     <NA> Estuary National Marine Sancturay
## 281                                     <NA> Estuary           Lower South Bay
## 282                                     <NA> Estuary           Lower South Bay
## 283                                     <NA> Estuary           Lower South Bay
## 284                                     <NA> Estuary           Lower South Bay
## 285                                     <NA> Estuary National Marine Sancturay
## 286                                     <NA> Estuary National Marine Sancturay
## 287                                     <NA> Estuary National Marine Sancturay
## 288                                     <NA> Estuary National Marine Sancturay
## 289                                     <NA> Estuary National Marine Sancturay
## 290                                     <NA> Estuary National Marine Sancturay
## 291                                     <NA> Estuary National Marine Sancturay
## 292                                     <NA> Estuary National Marine Sancturay
## 293                                     <NA> Estuary National Marine Sancturay
## 294                                     <NA> Estuary National Marine Sancturay
## 295                                     <NA> Estuary National Marine Sancturay
## 296                                     <NA> Estuary                 South Bay
## 297                                     <NA> Estuary                 South Bay
## 298                                     <NA> Estuary                 South Bay
## 299                                     <NA> Estuary                 South Bay
## 300                                     <NA> Estuary                 South Bay
## 301                                     <NA> Estuary                 South Bay
## 302                                     <NA> Estuary                 South Bay
## 303                                     <NA> Estuary                       SPB
## 304                                     <NA> Estuary                       SPB
## 305                                     <NA> Estuary                       SPB
## 306                                     <NA> Estuary                       SPB
## 307                                     <NA> Estuary                       SUB
## 308                                     <NA> Estuary                       SUB
##      latitude   longitude particles.L.blank.corrected
## 1      38.016    -122.254                   1.6300000
## 2      38.018    -122.277                   1.6500000
## 3   37.385832 -121.909581                   7.2000000
## 4       37.65    -122.412                   5.6300000
## 5      37.754    -122.204                   4.9400000
## 6      37.762    -122.214                   8.4300000
## 7      37.755    -122.201                  10.0600000
## 8    37.37356  -121.93283                   2.3100000
## 9   37.572638 -122.310769                   1.0900000
## 10  37.917861  -122.33838                  17.8400000
## 11   37.83429  -122.29349                  12.3600000
## 12  37.746843 -122.200699                  24.4100000
## 13    37.6952   -122.1858                   0.0645000
## 14    37.6952   -122.1858                   0.0115000
## 15    37.8236   -122.2956                   0.1778000
## 16    37.8236   -122.2956                   0.0421000
## 17    37.4527   -122.1108                   0.0030000
## 18    37.4527   -122.1108                   0.0054000
## 19    37.4332   -121.9522                   0.0186000
## 20    37.4332   -121.9522                   0.0233000
## 21    37.4193   -122.0162                   0.0222000
## 22    37.9961   -122.0686                   0.0778000
## 23    38.2233   -122.0829                   0.0037000
## 24    38.2233   -122.0829                   0.0055000
## 25    37.8236   -122.2956                   0.1083000
## 26    37.7476   -122.3728                   0.1593000
## 27    37.7476   -122.3728                   0.1816000
## 28    37.4193   -122.0162                   0.0075000
## 29    37.9961   -122.0686                   0.0683000
## 30    37.4576   -122.0921                          NA
## 31    37.4576   -122.0921                          NA
## 32    37.4576   -122.0921                          NA
## 33    37.4576   -122.0921                          NA
## 34    37.4576   -122.0921                          NA
## 35    37.4576   -122.0921                          NA
## 36    37.4576   -122.0921                          NA
## 37    37.4576   -122.0921                          NA
## 38    37.4576   -122.0921                          NA
## 39    37.4576   -122.0921                          NA
## 40    37.4576   -122.0921                          NA
## 41    37.4576   -122.0921                          NA
## 42    37.4576   -122.0921                          NA
## 43    37.4576   -122.0921                          NA
## 44    38.2093   -122.9292                          NA
## 45    38.2093   -122.9292                          NA
## 46    38.2093   -122.9292                          NA
## 47    38.2093   -122.9292                          NA
## 48    38.2093   -122.9292                          NA
## 49    38.2093   -122.9292                          NA
## 50    38.2093   -122.9292                          NA
## 51    38.2093   -122.9292                          NA
## 52    38.2093   -122.9292                          NA
## 53    38.2093   -122.9292                          NA
## 54    38.0908   -122.8358                          NA
## 55    38.0908   -122.8358                          NA
## 56    38.0908   -122.8358                          NA
## 57    38.0908   -122.8358                          NA
## 58    38.0908   -122.8358                          NA
## 59    38.0908   -122.8358                          NA
## 60    38.0908   -122.8358                          NA
## 61    38.0908   -122.8358                          NA
## 62    38.0908   -122.8358                          NA
## 63    38.0908   -122.8358                          NA
## 64    38.2093   -122.9292                          NA
## 65    38.2093   -122.9292                          NA
## 66    38.2093   -122.9292                          NA
## 67    38.2093   -122.9292                          NA
## 68    38.2093   -122.9292                          NA
## 69    38.2093   -122.9292                          NA
## 70    38.2093   -122.9292                          NA
## 71    38.2093   -122.9292                          NA
## 72    38.2093   -122.9292                          NA
## 73    38.2093   -122.9292                          NA
## 74    37.7579   -122.3055                          NA
## 75    37.7579   -122.3055                          NA
## 76    37.7579   -122.3055                          NA
## 77    37.7579   -122.3055                          NA
## 78    37.7579   -122.3055                          NA
## 79    37.7579   -122.3055                          NA
## 80    37.7579   -122.3055                          NA
## 81    37.7579   -122.3055                          NA
## 82    37.7579   -122.3055                          NA
## 83    37.7579   -122.3055                          NA
## 84    37.7579   -122.3055                          NA
## 85    37.7579   -122.3055                          NA
## 86    37.7579   -122.3055                          NA
## 87    37.7579   -122.3055                          NA
## 88    37.7579   -122.3055                          NA
## 89    37.7579   -122.3055                          NA
## 90    37.7579   -122.3055                          NA
## 91    37.7579   -122.3055                          NA
## 92    37.7579   -122.3055                          NA
## 93    37.7579   -122.3055                          NA
## 94    37.9067   -122.3467                          NA
## 95    37.9067   -122.3467                          NA
## 96    37.9067   -122.3467                          NA
## 97    37.9067   -122.3467                          NA
## 98    37.9067   -122.3467                          NA
## 99    37.9067   -122.3467                          NA
## 100   37.9067   -122.3467                          NA
## 101   37.9067   -122.3467                          NA
## 102   37.9067   -122.3467                          NA
## 103   37.9067   -122.3467                          NA
## 104   37.9067   -122.3467                          NA
## 105   37.9067   -122.3467                          NA
## 106   37.9067   -122.3467                          NA
## 107   37.9067   -122.3467                          NA
## 108   37.9067   -122.3467                          NA
## 109   37.9067   -122.3467                          NA
## 110   37.9067   -122.3467                          NA
## 111   37.9067   -122.3467                          NA
## 112   37.4621   -122.0217                          NA
## 113   37.4621   -122.0217                          NA
## 114   37.4621   -122.0217                          NA
## 115   37.4621   -122.0217                          NA
## 116   37.4621   -122.0217                          NA
## 117   37.4621   -122.0217                          NA
## 118   37.4621   -122.0217                          NA
## 119   37.4621   -122.0217                          NA
## 120   37.4621   -122.0217                          NA
## 121   37.4621   -122.0217                          NA
## 122   37.5277    -122.184                          NA
## 123   37.5277    -122.184                          NA
## 124   37.5277    -122.184                          NA
## 125   37.5277    -122.184                          NA
## 126   37.5277    -122.184                          NA
## 127   37.5277    -122.184                          NA
## 128   37.5277    -122.184                          NA
## 129   37.5277    -122.184                          NA
## 130   37.5277    -122.184                          NA
## 131   37.5277    -122.184                          NA
## 132   37.5277    -122.184                          NA
## 133   37.5277    -122.184                          NA
## 134   37.5277    -122.184                          NA
## 135   37.5277    -122.184                          NA
## 136   37.5277    -122.184                          NA
## 137   37.5277    -122.184                          NA
## 138   37.5277    -122.184                          NA
## 139   37.5277    -122.184                          NA
## 140   37.5277    -122.184                          NA
## 141   37.5277    -122.184                          NA
## 142   37.6414   -122.3945                          NA
## 143   37.6414   -122.3945                          NA
## 144   37.6414   -122.3945                          NA
## 145   37.6414   -122.3945                          NA
## 146   37.6414   -122.3945                          NA
## 147   37.6414   -122.3945                          NA
## 148   37.6414   -122.3945                          NA
## 149   37.6414   -122.3945                          NA
## 150   37.6414   -122.3945                          NA
## 151   37.6414   -122.3945                          NA
## 152   37.6414   -122.3945                          NA
## 153   37.6414   -122.3945                          NA
## 154   37.6414   -122.3945                          NA
## 155   37.6414   -122.3945                          NA
## 156   37.6414   -122.3945                          NA
## 157   37.6414   -122.3945                          NA
## 158   37.6414   -122.3945                          NA
## 159   37.6414   -122.3945                          NA
## 160   37.6414   -122.3945                          NA
## 161   37.6414   -122.3945                          NA
## 162   37.4621   -122.0217                          NA
## 163   37.4621   -122.0217                          NA
## 164   37.4621   -122.0217                          NA
## 165   37.4621   -122.0217                          NA
## 166   37.4621   -122.0217                          NA
## 167   37.4621   -122.0217                          NA
## 168   37.4621   -122.0217                          NA
## 169   37.4621   -122.0217                          NA
## 170   37.4621   -122.0217                          NA
## 171   37.4621   -122.0217                          NA
## 172   38.0908   -122.8358                          NA
## 173   38.0908   -122.8358                          NA
## 174   38.0908   -122.8358                          NA
## 175   38.0908   -122.8358                          NA
## 176   38.0908   -122.8358                          NA
## 177   38.0908   -122.8358                          NA
## 178   38.0908   -122.8358                          NA
## 179   38.0908   -122.8358                          NA
## 180   38.0908   -122.8358                          NA
## 181   38.0908   -122.8358                          NA
## 182   37.8766   -122.3615                          NA
## 183   37.9067   -122.3467                          NA
## 184   37.8279   -122.3034                          NA
## 185   37.7566   -122.2204                          NA
## 186   37.6414   -122.3945                          NA
## 187   37.4628    -122.105                          NA
## 188   37.4864    -122.069                          NA
## 189   37.4576    -122.092                          NA
## 190   37.6104    -122.167                          NA
## 191   37.6018    -122.362                          NA
## 192   37.5605    -122.131                          NA
## 193   37.5277    -122.184                          NA
## 194   37.4576     -122.04                          NA
## 195   37.4621    -122.022                          NA
## 196   38.0157   -122.3002                          NA
## 197   38.1084   -122.4881                          NA
## 198   38.1362    -122.035                          NA
## 199   38.0441   -122.0969                          NA
## 200   38.2093   -122.9292                          NA
## 201   38.0908   -122.8358                          NA
## 202     37.92     -122.44                   0.0000230
## 203     37.92     -122.43                   0.0061140
## 204     37.84     -122.42                   0.0004390
## 205     37.85     -122.41                   0.0018880
## 206     37.85     -122.41                   0.0005110
## 207     37.83     -122.32                   0.0000830
## 208     37.83     -122.32                   0.0004640
## 209       N/A         N/A                   0.0007740
## 210     37.78     -122.35                   0.0007290
## 211     37.75     -122.23                   0.0022650
## 212     37.75     -122.23                   0.0043430
## 213     37.69     -122.29                   0.0001880
## 214     37.69      -122.3                   0.0555910
## 215      38.1     -123.11                   0.0000880
## 216     38.11     -123.11                   0.0001630
## 217     38.02     -123.33                   0.0001260
## 218     38.03     -123.31                   0.0001390
## 219     37.99      -123.5                   0.0000000
## 220       N/A         N/A                   0.0000230
## 221     37.97     -122.93                   0.0002180
## 222     37.97     -122.93                   0.0000200
## 223     37.82     -123.02                   0.0000790
## 224     37.82     -123.01                   0.0001390
## 225     37.75     -123.26                   0.0000780
## 226     37.73     -123.26                   0.0000050
## 227     37.81     -122.76                   0.0000960
## 228     37.81     -122.76                   0.0000560
## 229     37.47     -122.06                   0.0009820
## 230     37.48     -122.08                   0.0002660
## 231     37.46     -122.08                   0.0003570
## 232     37.47     -122.09                   0.0002480
## 233     37.46     -122.03                   0.0001530
## 234     37.45     -122.03                   0.0005160
## 235     37.81     -122.47                   0.0003960
## 236     37.79      -122.5                   0.0002940
## 237      37.8      -122.5                   0.0002730
## 238     37.81     -122.51                   0.0000190
## 239     37.67     -122.61                   0.0000380
## 240     37.67     -122.61                   0.0000680
## 241     37.51     -122.57                   0.0000540
## 242     37.51     -122.58                   0.0000380
## 243     37.44     -122.93                   0.0000680
## 244     37.45     -122.93                   0.0000240
## 245     37.65     -122.24                   0.0001120
## 246     37.65     -122.23                   0.0002360
## 247      37.6     -122.25                   0.0001810
## 248     37.59      -122.2                   0.0026050
## 249     37.59     -122.28                   0.0001280
## 250     37.58     -122.27                   0.0004880
## 251     37.57     -122.21                   0.0028990
## 252     37.56     -122.22                   0.0013840
## 253     37.82     -122.36                   0.0004260
## 254     38.05     -122.42                   0.0000590
## 255     38.06     -122.42                   0.0000920
## 256     38.64     -122.37                   0.0006370
## 257     38.02     -122.37                   0.0014090
## 258     38.11     -122.06                   0.0000810
## 259     38.11     -122.06                   0.0001310
## 260  37.9156   -122.4412                    3.4653465
## 261  37.9229   -122.4330                    2.7348777
## 262  37.8430   -122.4150                    7.4331021
## 263  37.8445   -122.4069                    0.6277464
## 264  37.8342   -122.3204                    1.9509595
## 265  37.8339   -122.3221                    4.9844237
## 266      N/A         N/A                    2.3251073
## 267  37.7795   -122.3537                    1.5827794
## 268  37.7514   -122.2260                    2.7035623
## 269  37.7505   -122.2278                    2.5510204
## 270  37.6872   -122.2909                    6.5789474
## 271  37.6936   -122.2991                   18.7110187
## 272  38.1068   -123.1138                    3.0000000
## 273  38.0346   -123.3131                    1.6404199
## 274  37.9853   -123.4973                    8.6715227
## 275  37.8128   -122.4723                    0.6523157
## 276  37.9670   -122.9272                    0.0000000
## 277  37.9695   -122.9270                    1.8115942
## 278  37.8213   -123.0068                    0.7095745
## 279  37.7327   -123.2630                    1.2626263
## 280  37.8058   -122.7561                    3.6647546
## 281  37.4801   -122.0781                    3.0984997
## 282  37.4654   -122.0912                    1.2795905
## 283  37.4528   -122.0331                    7.6190476
## 284  37.4645   -122.0271                    2.4122807
## 285  37.8208   -123.0177                   13.5732323
## 286  37.8064   -122.7583                    2.3832221
## 287  37.8053   -122.5082                    0.9433962
## 288  37.7985   -122.5049                   35.7031494
## 289  37.7935   -122.5030                    2.2525988
## 290  37.6726   -122.6108                    2.2022684
## 291  37.6718   -122.6110                    1.6056519
## 292  37.5070   -122.5804                    4.2694497
## 293      N/A         N/A                    3.5020694
## 294  37.4504   -122.9320                   18.7659033
## 295  37.4446   -122.9280                    6.2984496
## 296  37.6534   -122.2281                    0.9980040
## 297  37.6500   -122.2433                    6.1443932
## 298  37.5863   -122.2022                    3.3460803
## 299  37.5983   -122.2502                    1.5957447
## 300  37.5829   -122.2708                    2.6666667
## 301  37.5649   -122.2227                    4.3383948
## 302  37.5701   -122.2129                    9.9313832
## 303  38.0513   -122.4218                    3.3333333
## 304  38.0598   -122.4244                    2.8333333
## 305  38.6405   -122.3716                    5.0860720
## 306  38.0239   -122.3682                    5.2430887
## 307  38.1071   -122.0563                    2.7646130
## 308  38.1079   -122.0570                    4.4275775
##     particles.fish.blank.corrected particles.kg.blank.corrected sample.matrix
## 1                               NA                           NA         water
## 2                               NA                           NA         water
## 3                               NA                           NA         water
## 4                               NA                           NA         water
## 5                               NA                           NA         water
## 6                               NA                           NA         water
## 7                               NA                           NA         water
## 8                               NA                           NA         water
## 9                               NA                           NA         water
## 10                              NA                           NA         water
## 11                              NA                           NA         water
## 12                              NA                           NA         water
## 13                              NA                           NA         water
## 14                              NA                           NA         water
## 15                              NA                           NA         water
## 16                              NA                           NA         water
## 17                              NA                           NA         water
## 18                              NA                           NA         water
## 19                              NA                           NA         water
## 20                              NA                           NA         water
## 21                              NA                           NA         water
## 22                              NA                           NA         water
## 23                              NA                           NA         water
## 24                              NA                           NA         water
## 25                              NA                           NA         water
## 26                              NA                           NA         water
## 27                              NA                           NA         water
## 28                              NA                           NA         water
## 29                              NA                           NA         water
## 30                           24.27                           NA          fish
## 31                            6.60                           NA          fish
## 32                            0.87                           NA          fish
## 33                            1.00                           NA          fish
## 34                            0.93                           NA          fish
## 35                            3.53                           NA          fish
## 36                            2.40                           NA          fish
## 37                           45.07                           NA          fish
## 38                            8.00                           NA          fish
## 39                           11.67                           NA          fish
## 40                            5.73                           NA          fish
## 41                            5.87                           NA          fish
## 42                           14.47                           NA          fish
## 43                            1.80                           NA          fish
## 44                            0.00                           NA          fish
## 45                            0.00                           NA          fish
## 46                            1.73                           NA          fish
## 47                            0.13                           NA          fish
## 48                            1.80                           NA          fish
## 49                            1.00                           NA          fish
## 50                            5.47                           NA          fish
## 51                            3.87                           NA          fish
## 52                            7.40                           NA          fish
## 53                            6.00                           NA          fish
## 54                            5.47                           NA          fish
## 55                            3.60                           NA          fish
## 56                            0.00                           NA          fish
## 57                            2.00                           NA          fish
## 58                            2.67                           NA          fish
## 59                            1.60                           NA          fish
## 60                            1.13                           NA          fish
## 61                            1.60                           NA          fish
## 62                            1.60                           NA          fish
## 63                            0.87                           NA          fish
## 64                            6.33                           NA          fish
## 65                            0.13                           NA          fish
## 66                           15.40                           NA          fish
## 67                           11.27                           NA          fish
## 68                           11.40                           NA          fish
## 69                            3.27                           NA          fish
## 70                           11.33                           NA          fish
## 71                            1.87                           NA          fish
## 72                            2.40                           NA          fish
## 73                            1.00                           NA          fish
## 74                           11.13                           NA          fish
## 75                            9.07                           NA          fish
## 76                            3.93                           NA          fish
## 77                            8.87                           NA          fish
## 78                            9.40                           NA          fish
## 79                            3.40                           NA          fish
## 80                            9.00                           NA          fish
## 81                           16.40                           NA          fish
## 82                            6.60                           NA          fish
## 83                            1.80                           NA          fish
## 84                           17.53                           NA          fish
## 85                           17.27                           NA          fish
## 86                           11.07                           NA          fish
## 87                           24.00                           NA          fish
## 88                           20.33                           NA          fish
## 89                           14.53                           NA          fish
## 90                           17.73                           NA          fish
## 91                            9.53                           NA          fish
## 92                           13.47                           NA          fish
## 93                           14.60                           NA          fish
## 94                           35.13                           NA          fish
## 95                           20.40                           NA          fish
## 96                           28.13                           NA          fish
## 97                           13.13                           NA          fish
## 98                           13.13                           NA          fish
## 99                            5.73                           NA          fish
## 100                          14.40                           NA          fish
## 101                          15.07                           NA          fish
## 102                          21.93                           NA          fish
## 103                           7.40                           NA          fish
## 104                          21.60                           NA          fish
## 105                          35.40                           NA          fish
## 106                          22.53                           NA          fish
## 107                           6.67                           NA          fish
## 108                          12.33                           NA          fish
## 109                          18.87                           NA          fish
## 110                           8.40                           NA          fish
## 111                           3.40                           NA          fish
## 112                           9.00                           NA          fish
## 113                           0.73                           NA          fish
## 114                           2.47                           NA          fish
## 115                           7.27                           NA          fish
## 116                           2.40                           NA          fish
## 117                           1.67                           NA          fish
## 118                           2.73                           NA          fish
## 119                           5.40                           NA          fish
## 120                           0.73                           NA          fish
## 121                           1.67                           NA          fish
## 122                           3.60                           NA          fish
## 123                           1.73                           NA          fish
## 124                           1.00                           NA          fish
## 125                           1.67                           NA          fish
## 126                          12.87                           NA          fish
## 127                           4.53                           NA          fish
## 128                           3.40                           NA          fish
## 129                           3.73                           NA          fish
## 130                           1.87                           NA          fish
## 131                           4.73                           NA          fish
## 132                          10.13                           NA          fish
## 133                          27.13                           NA          fish
## 134                          31.20                           NA          fish
## 135                          35.13                           NA          fish
## 136                          27.00                           NA          fish
## 137                          24.00                           NA          fish
## 138                          56.13                           NA          fish
## 139                          16.27                           NA          fish
## 140                          21.13                           NA          fish
## 141                          28.13                           NA          fish
## 142                          22.27                           NA          fish
## 143                           9.27                           NA          fish
## 144                          24.07                           NA          fish
## 145                           7.40                           NA          fish
## 146                          12.27                           NA          fish
## 147                           7.13                           NA          fish
## 148                           7.53                           NA          fish
## 149                           7.87                           NA          fish
## 150                           2.13                           NA          fish
## 151                           1.93                           NA          fish
## 152                           7.87                           NA          fish
## 153                           1.53                           NA          fish
## 154                           2.80                           NA          fish
## 155                           8.40                           NA          fish
## 156                          12.40                           NA          fish
## 157                           3.87                           NA          fish
## 158                           8.87                           NA          fish
## 159                           6.47                           NA          fish
## 160                           4.53                           NA          fish
## 161                           2.87                           NA          fish
## 162                          32.93                           NA          fish
## 163                          15.60                           NA          fish
## 164                          44.13                           NA          fish
## 165                          17.47                           NA          fish
## 166                           4.00                           NA          fish
## 167                           6.53                           NA          fish
## 168                           8.80                           NA          fish
## 169                          10.27                           NA          fish
## 170                           7.80                           NA          fish
## 171                           0.80                           NA          fish
## 172                          20.47                           NA          fish
## 173                          13.33                           NA          fish
## 174                           4.27                           NA          fish
## 175                           2.60                           NA          fish
## 176                           6.40                           NA          fish
## 177                           6.47                           NA          fish
## 178                           1.00                           NA          fish
## 179                           3.73                           NA          fish
## 180                           2.27                           NA          fish
## 181                           5.60                           NA          fish
## 182                             NA                       425.56      sediment
## 183                             NA                      1140.55      sediment
## 184                             NA                      1610.94      sediment
## 185                             NA                     12095.68      sediment
## 186                             NA                      2730.69      sediment
## 187                             NA                     42104.17      sediment
## 188                             NA                      3647.26      sediment
## 189                             NA                      7108.70      sediment
## 190                             NA                      2893.81      sediment
## 191                             NA                       835.84      sediment
## 192                             NA                        26.67      sediment
## 193                             NA                       313.33      sediment
## 194                             NA                      9270.83      sediment
## 195                             NA                      7045.45      sediment
## 196                             NA                       567.78      sediment
## 197                             NA                      1028.07      sediment
## 198                             NA                       250.00      sediment
## 199                             NA                       131.02      sediment
## 200                             NA                       100.07      sediment
## 201                             NA                       216.38      sediment
## 202                             NA                           NA         water
## 203                             NA                           NA         water
## 204                             NA                           NA         water
## 205                             NA                           NA         water
## 206                             NA                           NA         water
## 207                             NA                           NA         water
## 208                             NA                           NA         water
## 209                             NA                           NA         water
## 210                             NA                           NA         water
## 211                             NA                           NA         water
## 212                             NA                           NA         water
## 213                             NA                           NA         water
## 214                             NA                           NA         water
## 215                             NA                           NA         water
## 216                             NA                           NA         water
## 217                             NA                           NA         water
## 218                             NA                           NA         water
## 219                             NA                           NA         water
## 220                             NA                           NA         water
## 221                             NA                           NA         water
## 222                             NA                           NA         water
## 223                             NA                           NA         water
## 224                             NA                           NA         water
## 225                             NA                           NA         water
## 226                             NA                           NA         water
## 227                             NA                           NA         water
## 228                             NA                           NA         water
## 229                             NA                           NA         water
## 230                             NA                           NA         water
## 231                             NA                           NA         water
## 232                             NA                           NA         water
## 233                             NA                           NA         water
## 234                             NA                           NA         water
## 235                             NA                           NA         water
## 236                             NA                           NA         water
## 237                             NA                           NA         water
## 238                             NA                           NA         water
## 239                             NA                           NA         water
## 240                             NA                           NA         water
## 241                             NA                           NA         water
## 242                             NA                           NA         water
## 243                             NA                           NA         water
## 244                             NA                           NA         water
## 245                             NA                           NA         water
## 246                             NA                           NA         water
## 247                             NA                           NA         water
## 248                             NA                           NA         water
## 249                             NA                           NA         water
## 250                             NA                           NA         water
## 251                             NA                           NA         water
## 252                             NA                           NA         water
## 253                             NA                           NA         water
## 254                             NA                           NA         water
## 255                             NA                           NA         water
## 256                             NA                           NA         water
## 257                             NA                           NA         water
## 258                             NA                           NA         water
## 259                             NA                           NA         water
## 260                             NA                           NA         water
## 261                             NA                           NA         water
## 262                             NA                           NA         water
## 263                             NA                           NA         water
## 264                             NA                           NA         water
## 265                             NA                           NA         water
## 266                             NA                           NA         water
## 267                             NA                           NA         water
## 268                             NA                           NA         water
## 269                             NA                           NA         water
## 270                             NA                           NA         water
## 271                             NA                           NA         water
## 272                             NA                           NA         water
## 273                             NA                           NA         water
## 274                             NA                           NA         water
## 275                             NA                           NA         water
## 276                             NA                           NA         water
## 277                             NA                           NA         water
## 278                             NA                           NA         water
## 279                             NA                           NA         water
## 280                             NA                           NA         water
## 281                             NA                           NA         water
## 282                             NA                           NA         water
## 283                             NA                           NA         water
## 284                             NA                           NA         water
## 285                             NA                           NA         water
## 286                             NA                           NA         water
## 287                             NA                           NA         water
## 288                             NA                           NA         water
## 289                             NA                           NA         water
## 290                             NA                           NA         water
## 291                             NA                           NA         water
## 292                             NA                           NA         water
## 293                             NA                           NA         water
## 294                             NA                           NA         water
## 295                             NA                           NA         water
## 296                             NA                           NA         water
## 297                             NA                           NA         water
## 298                             NA                           NA         water
## 299                             NA                           NA         water
## 300                             NA                           NA         water
## 301                             NA                           NA         water
## 302                             NA                           NA         water
## 303                             NA                           NA         water
## 304                             NA                           NA         water
## 305                             NA                           NA         water
## 306                             NA                           NA         water
## 307                             NA                           NA         water
## 308                             NA                           NA         water
##     sample.matrix.specific               Sampling.apparatus x1M  x2M
## 1               stormwater depth-integrated perisaltic pump 106 5000
## 2               stormwater depth-integrated perisaltic pump 106 5000
## 3               stormwater depth-integrated perisaltic pump 106 5000
## 4               stormwater depth-integrated perisaltic pump 106 5000
## 5               stormwater depth-integrated perisaltic pump 106 5000
## 6               stormwater depth-integrated perisaltic pump 106 5000
## 7               stormwater depth-integrated perisaltic pump 106 5000
## 8               stormwater depth-integrated perisaltic pump 106 5000
## 9               stormwater depth-integrated perisaltic pump 106 5000
## 10              stormwater depth-integrated perisaltic pump 106 5000
## 11              stormwater depth-integrated perisaltic pump 106 5000
## 12              stormwater depth-integrated perisaltic pump 106 5000
## 13              wastewater                        Composite 110 5000
## 14              wastewater                        Composite 110 5000
## 15              wastewater                        Composite 110 5000
## 16              wastewater                        Composite 110 5000
## 17              wastewater                        Composite 110 5000
## 18              wastewater                        Composite 110 5000
## 19              wastewater                        Composite 110 5000
## 20              wastewater                        Composite 110 5000
## 21              wastewater                        Composite 110 5000
## 22              wastewater                        Composite 110 5000
## 23              wastewater                        Composite 110 5000
## 24              wastewater                        Composite 110 5000
## 25              wastewater                        Composite 110 5000
## 26              wastewater                        Composite 110 5000
## 27              wastewater                        Composite 110 5000
## 28              wastewater                        Composite 110 5000
## 29              wastewater                        Composite 110 5000
## 30                 anchovy             otter trawl/cast net  25 5000
## 31                 anchovy             otter trawl/cast net  25 5000
## 32                 anchovy             otter trawl/cast net  25 5000
## 33                topsmelt             otter trawl/cast net  25 5000
## 34                topsmelt             otter trawl/cast net  25 5000
## 35                topsmelt             otter trawl/cast net  25 5000
## 36                topsmelt             otter trawl/cast net  25 5000
## 37                 anchovy             otter trawl/cast net  25 5000
## 38                topsmelt             otter trawl/cast net  25 5000
## 39                topsmelt             otter trawl/cast net  25 5000
## 40                topsmelt             otter trawl/cast net  25 5000
## 41                topsmelt             otter trawl/cast net  25 5000
## 42                topsmelt             otter trawl/cast net  25 5000
## 43                topsmelt             otter trawl/cast net  25 5000
## 44                 anchovy             otter trawl/cast net  25 5000
## 45                 anchovy             otter trawl/cast net  25 5000
## 46                 anchovy             otter trawl/cast net  25 5000
## 47                 anchovy             otter trawl/cast net  25 5000
## 48                 anchovy             otter trawl/cast net  25 5000
## 49                 anchovy             otter trawl/cast net  25 5000
## 50                 anchovy             otter trawl/cast net  25 5000
## 51                 anchovy             otter trawl/cast net  25 5000
## 52                 anchovy             otter trawl/cast net  25 5000
## 53                 anchovy             otter trawl/cast net  25 5000
## 54                 anchovy             otter trawl/cast net  25 5000
## 55                 anchovy             otter trawl/cast net  25 5000
## 56                 anchovy             otter trawl/cast net  25 5000
## 57                 anchovy             otter trawl/cast net  25 5000
## 58                 anchovy             otter trawl/cast net  25 5000
## 59                 anchovy             otter trawl/cast net  25 5000
## 60                 anchovy             otter trawl/cast net  25 5000
## 61                 anchovy             otter trawl/cast net  25 5000
## 62                 anchovy             otter trawl/cast net  25 5000
## 63                 anchovy             otter trawl/cast net  25 5000
## 64                topsmelt             otter trawl/cast net  25 5000
## 65                topsmelt             otter trawl/cast net  25 5000
## 66                topsmelt             otter trawl/cast net  25 5000
## 67                topsmelt             otter trawl/cast net  25 5000
## 68                topsmelt             otter trawl/cast net  25 5000
## 69                topsmelt             otter trawl/cast net  25 5000
## 70                topsmelt             otter trawl/cast net  25 5000
## 71                topsmelt             otter trawl/cast net  25 5000
## 72                topsmelt             otter trawl/cast net  25 5000
## 73                topsmelt             otter trawl/cast net  25 5000
## 74                topsmelt             otter trawl/cast net  25 5000
## 75                topsmelt             otter trawl/cast net  25 5000
## 76                topsmelt             otter trawl/cast net  25 5000
## 77                topsmelt             otter trawl/cast net  25 5000
## 78                topsmelt             otter trawl/cast net  25 5000
## 79                topsmelt             otter trawl/cast net  25 5000
## 80                topsmelt             otter trawl/cast net  25 5000
## 81                topsmelt             otter trawl/cast net  25 5000
## 82                topsmelt             otter trawl/cast net  25 5000
## 83                topsmelt             otter trawl/cast net  25 5000
## 84                 anchovy             otter trawl/cast net  25 5000
## 85                 anchovy             otter trawl/cast net  25 5000
## 86                 anchovy             otter trawl/cast net  25 5000
## 87                 anchovy             otter trawl/cast net  25 5000
## 88                 anchovy             otter trawl/cast net  25 5000
## 89                 anchovy             otter trawl/cast net  25 5000
## 90                 anchovy             otter trawl/cast net  25 5000
## 91                 anchovy             otter trawl/cast net  25 5000
## 92                 anchovy             otter trawl/cast net  25 5000
## 93                 anchovy             otter trawl/cast net  25 5000
## 94                 anchovy             otter trawl/cast net  25 5000
## 95                 anchovy             otter trawl/cast net  25 5000
## 96                 anchovy             otter trawl/cast net  25 5000
## 97                 anchovy             otter trawl/cast net  25 5000
## 98                 anchovy             otter trawl/cast net  25 5000
## 99                 anchovy             otter trawl/cast net  25 5000
## 100                anchovy             otter trawl/cast net  25 5000
## 101                anchovy             otter trawl/cast net  25 5000
## 102                anchovy             otter trawl/cast net  25 5000
## 103                anchovy             otter trawl/cast net  25 5000
## 104               topsmelt             otter trawl/cast net  25 5000
## 105               topsmelt             otter trawl/cast net  25 5000
## 106               topsmelt             otter trawl/cast net  25 5000
## 107               topsmelt             otter trawl/cast net  25 5000
## 108               topsmelt             otter trawl/cast net  25 5000
## 109               topsmelt             otter trawl/cast net  25 5000
## 110               topsmelt             otter trawl/cast net  25 5000
## 111               topsmelt             otter trawl/cast net  25 5000
## 112                anchovy             otter trawl/cast net  25 5000
## 113                anchovy             otter trawl/cast net  25 5000
## 114                anchovy             otter trawl/cast net  25 5000
## 115                anchovy             otter trawl/cast net  25 5000
## 116                anchovy             otter trawl/cast net  25 5000
## 117                anchovy             otter trawl/cast net  25 5000
## 118                anchovy             otter trawl/cast net  25 5000
## 119                anchovy             otter trawl/cast net  25 5000
## 120                anchovy             otter trawl/cast net  25 5000
## 121                anchovy             otter trawl/cast net  25 5000
## 122                anchovy             otter trawl/cast net  25 5000
## 123                anchovy             otter trawl/cast net  25 5000
## 124                anchovy             otter trawl/cast net  25 5000
## 125                anchovy             otter trawl/cast net  25 5000
## 126                anchovy             otter trawl/cast net  25 5000
## 127                anchovy             otter trawl/cast net  25 5000
## 128                anchovy             otter trawl/cast net  25 5000
## 129                anchovy             otter trawl/cast net  25 5000
## 130                anchovy             otter trawl/cast net  25 5000
## 131                anchovy             otter trawl/cast net  25 5000
## 132               topsmelt             otter trawl/cast net  25 5000
## 133               topsmelt             otter trawl/cast net  25 5000
## 134               topsmelt             otter trawl/cast net  25 5000
## 135               topsmelt             otter trawl/cast net  25 5000
## 136               topsmelt             otter trawl/cast net  25 5000
## 137               topsmelt             otter trawl/cast net  25 5000
## 138               topsmelt             otter trawl/cast net  25 5000
## 139               topsmelt             otter trawl/cast net  25 5000
## 140               topsmelt             otter trawl/cast net  25 5000
## 141               topsmelt             otter trawl/cast net  25 5000
## 142                anchovy             otter trawl/cast net  25 5000
## 143                anchovy             otter trawl/cast net  25 5000
## 144                anchovy             otter trawl/cast net  25 5000
## 145                anchovy             otter trawl/cast net  25 5000
## 146                anchovy             otter trawl/cast net  25 5000
## 147                anchovy             otter trawl/cast net  25 5000
## 148                anchovy             otter trawl/cast net  25 5000
## 149                anchovy             otter trawl/cast net  25 5000
## 150                anchovy             otter trawl/cast net  25 5000
## 151                anchovy             otter trawl/cast net  25 5000
## 152               topsmelt             otter trawl/cast net  25 5000
## 153               topsmelt             otter trawl/cast net  25 5000
## 154               topsmelt             otter trawl/cast net  25 5000
## 155               topsmelt             otter trawl/cast net  25 5000
## 156               topsmelt             otter trawl/cast net  25 5000
## 157               topsmelt             otter trawl/cast net  25 5000
## 158               topsmelt             otter trawl/cast net  25 5000
## 159               topsmelt             otter trawl/cast net  25 5000
## 160               topsmelt             otter trawl/cast net  25 5000
## 161               topsmelt             otter trawl/cast net  25 5000
## 162               topsmelt             otter trawl/cast net  25 5000
## 163               topsmelt             otter trawl/cast net  25 5000
## 164               topsmelt             otter trawl/cast net  25 5000
## 165               topsmelt             otter trawl/cast net  25 5000
## 166               topsmelt             otter trawl/cast net  25 5000
## 167               topsmelt             otter trawl/cast net  25 5000
## 168               topsmelt             otter trawl/cast net  25 5000
## 169               topsmelt             otter trawl/cast net  25 5000
## 170               topsmelt             otter trawl/cast net  25 5000
## 171               topsmelt             otter trawl/cast net  25 5000
## 172               topsmelt             otter trawl/cast net  25 5000
## 173               topsmelt             otter trawl/cast net  25 5000
## 174               topsmelt             otter trawl/cast net  25 5000
## 175               topsmelt             otter trawl/cast net  25 5000
## 176               topsmelt             otter trawl/cast net  25 5000
## 177               topsmelt             otter trawl/cast net  25 5000
## 178               topsmelt             otter trawl/cast net  25 5000
## 179               topsmelt             otter trawl/cast net  25 5000
## 180               topsmelt             otter trawl/cast net  25 5000
## 181               topsmelt             otter trawl/cast net  25 5000
## 182               sediment                    Van Veen Grab  45 5000
## 183               sediment                    Van Veen Grab  45 5000
## 184               sediment                    Van Veen Grab  45 5000
## 185               sediment                    Van Veen Grab  45 5000
## 186               sediment                    Van Veen Grab  45 5000
## 187               sediment                    Van Veen Grab  45 5000
## 188               sediment                    Van Veen Grab  45 5000
## 189               sediment                    Van Veen Grab  45 5000
## 190               sediment                    Van Veen Grab  45 5000
## 191               sediment                    Van Veen Grab  45 5000
## 192               sediment                    Van Veen Grab  45 5000
## 193               sediment                    Van Veen Grab  45 5000
## 194               sediment                    Van Veen Grab  45 5000
## 195               sediment                    Van Veen Grab  45 5000
## 196               sediment                    Van Veen Grab  45 5000
## 197               sediment                    Van Veen Grab  45 5000
## 198               sediment                    Van Veen Grab  45 5000
## 199               sediment                    Van Veen Grab  45 5000
## 200               sediment                    Van Veen Grab  45 5000
## 201               sediment                    Van Veen Grab  45 5000
## 202          surface water                      Manta Trawl 333 5000
## 203          surface water                      Manta Trawl 333 5000
## 204          surface water                      Manta Trawl 333 5000
## 205          surface water                      Manta Trawl 333 5000
## 206          surface water                      Manta Trawl 333 5000
## 207          surface water                      Manta Trawl 333 5000
## 208          surface water                      Manta Trawl 333 5000
## 209          surface water                      Manta Trawl 333 5000
## 210          surface water                      Manta Trawl 333 5000
## 211          surface water                      Manta Trawl 333 5000
## 212          surface water                      Manta Trawl 333 5000
## 213          surface water                      Manta Trawl 333 5000
## 214          surface water                      Manta Trawl 333 5000
## 215          surface water                      Manta Trawl 333 5000
## 216          surface water                      Manta Trawl 333 5000
## 217          surface water                      Manta Trawl 333 5000
## 218          surface water                      Manta Trawl 333 5000
## 219          surface water                      Manta Trawl 333 5000
## 220          surface water                      Manta Trawl 333 5000
## 221          surface water                      Manta Trawl 333 5000
## 222          surface water                      Manta Trawl 333 5000
## 223          surface water                      Manta Trawl 333 5000
## 224          surface water                      Manta Trawl 333 5000
## 225          surface water                      Manta Trawl 333 5000
## 226          surface water                      Manta Trawl 333 5000
## 227          surface water                      Manta Trawl 333 5000
## 228          surface water                      Manta Trawl 333 5000
## 229          surface water                      Manta Trawl 333 5000
## 230          surface water                      Manta Trawl 333 5000
## 231          surface water                      Manta Trawl 333 5000
## 232          surface water                      Manta Trawl 333 5000
## 233          surface water                      Manta Trawl 333 5000
## 234          surface water                      Manta Trawl 333 5000
## 235          surface water                      Manta Trawl 333 5000
## 236          surface water                      Manta Trawl 333 5000
## 237          surface water                      Manta Trawl 333 5000
## 238          surface water                      Manta Trawl 333 5000
## 239          surface water                      Manta Trawl 333 5000
## 240          surface water                      Manta Trawl 333 5000
## 241          surface water                      Manta Trawl 333 5000
## 242          surface water                      Manta Trawl 333 5000
## 243          surface water                      Manta Trawl 333 5000
## 244          surface water                      Manta Trawl 333 5000
## 245          surface water                      Manta Trawl 333 5000
## 246          surface water                      Manta Trawl 333 5000
## 247          surface water                      Manta Trawl 333 5000
## 248          surface water                      Manta Trawl 333 5000
## 249          surface water                      Manta Trawl 333 5000
## 250          surface water                      Manta Trawl 333 5000
## 251          surface water                      Manta Trawl 333 5000
## 252          surface water                      Manta Trawl 333 5000
## 253          surface water                      Manta Trawl 333 5000
## 254          surface water                      Manta Trawl 333 5000
## 255          surface water                      Manta Trawl 333 5000
## 256          surface water                      Manta Trawl 333 5000
## 257          surface water                      Manta Trawl 333 5000
## 258          surface water                      Manta Trawl 333 5000
## 259          surface water                      Manta Trawl 333 5000
## 260          surface water                         1-L grab  50 5000
## 261          surface water                         1-L grab  50 5000
## 262          surface water                         1-L grab  50 5000
## 263          surface water                         1-L grab  50 5000
## 264          surface water                         1-L grab  50 5000
## 265          surface water                         1-L grab  50 5000
## 266          surface water                         1-L grab  50 5000
## 267          surface water                         1-L grab  50 5000
## 268          surface water                         1-L grab  50 5000
## 269          surface water                         1-L grab  50 5000
## 270          surface water                         1-L grab  50 5000
## 271          surface water                         1-L grab  50 5000
## 272          surface water                         1-L grab  50 5000
## 273          surface water                         1-L grab  50 5000
## 274          surface water                         1-L grab  50 5000
## 275          surface water                         1-L grab  50 5000
## 276          surface water                         1-L grab  50 5000
## 277          surface water                         1-L grab  50 5000
## 278          surface water                         1-L grab  50 5000
## 279          surface water                         1-L grab  50 5000
## 280          surface water                         1-L grab  50 5000
## 281          surface water                         1-L grab  50 5000
## 282          surface water                         1-L grab  50 5000
## 283          surface water                         1-L grab  50 5000
## 284          surface water                         1-L grab  50 5000
## 285          surface water                         1-L grab  50 5000
## 286          surface water                         1-L grab  50 5000
## 287          surface water                         1-L grab  50 5000
## 288          surface water                         1-L grab  50 5000
## 289          surface water                         1-L grab  50 5000
## 290          surface water                         1-L grab  50 5000
## 291          surface water                         1-L grab  50 5000
## 292          surface water                         1-L grab  50 5000
## 293          surface water                         1-L grab  50 5000
## 294          surface water                         1-L grab  50 5000
## 295          surface water                         1-L grab  50 5000
## 296          surface water                         1-L grab  50 5000
## 297          surface water                         1-L grab  50 5000
## 298          surface water                         1-L grab  50 5000
## 299          surface water                         1-L grab  50 5000
## 300          surface water                         1-L grab  50 5000
## 301          surface water                         1-L grab  50 5000
## 302          surface water                         1-L grab  50 5000
## 303          surface water                         1-L grab  50 5000
## 304          surface water                         1-L grab  50 5000
## 305          surface water                         1-L grab  50 5000
## 306          surface water                         1-L grab  50 5000
## 307          surface water                         1-L grab  50 5000
## 308          surface water                         1-L grab  50 5000
##     Sample.Type season fiber.correction.factor fiber.correction.factor.sd
## 1        sample   <NA>                1.000000                         NA
## 2        sample   <NA>                1.000000                         NA
## 3        sample   <NA>                1.000000                         NA
## 4        sample   <NA>                1.000000                         NA
## 5        sample   <NA>                1.000000                         NA
## 6        sample   <NA>                1.000000                         NA
## 7        sample   <NA>                1.000000                         NA
## 8        sample   <NA>                1.000000                         NA
## 9        sample   <NA>                1.000000                         NA
## 10       sample   <NA>                1.000000                         NA
## 11       sample   <NA>                1.000000                         NA
## 12       sample   <NA>                1.000000                         NA
## 13       sample    dry                1.000000                         NA
## 14       sample    dry                1.000000                         NA
## 15       sample    dry                1.000000                         NA
## 16       sample    dry                1.000000                         NA
## 17       sample    dry                1.000000                         NA
## 18       sample   <NA>                1.000000                         NA
## 19       sample    dry                1.000000                         NA
## 20       sample    dry                1.000000                         NA
## 21       sample    dry                1.000000                         NA
## 22       sample    dry                1.000000                         NA
## 23       sample    dry                1.000000                         NA
## 24       sample    dry                1.000000                         NA
## 25       sample   <NA>                1.000000                         NA
## 26       sample    wet                1.000000                         NA
## 27       sample    wet                1.000000                         NA
## 28       sample   <NA>                1.000000                         NA
## 29       sample    wet                1.000000                         NA
## 30       sample   <NA>                1.000000                         NA
## 31       sample   <NA>                1.000000                         NA
## 32       sample   <NA>                1.000000                         NA
## 33       sample   <NA>                1.000000                         NA
## 34       sample   <NA>                1.000000                         NA
## 35       sample   <NA>                1.000000                         NA
## 36       sample   <NA>                1.000000                         NA
## 37       sample   <NA>                1.000000                         NA
## 38       sample   <NA>                1.000000                         NA
## 39       sample   <NA>                1.000000                         NA
## 40       sample   <NA>                1.000000                         NA
## 41       sample   <NA>                1.000000                         NA
## 42       sample   <NA>                1.000000                         NA
## 43       sample   <NA>                1.000000                         NA
## 44       sample   <NA>                1.000000                         NA
## 45       sample   <NA>                1.000000                         NA
## 46       sample   <NA>                1.000000                         NA
## 47       sample   <NA>                1.000000                         NA
## 48       sample   <NA>                1.000000                         NA
## 49       sample   <NA>                1.000000                         NA
## 50       sample   <NA>                1.000000                         NA
## 51       sample   <NA>                1.000000                         NA
## 52       sample   <NA>                1.000000                         NA
## 53       sample   <NA>                1.000000                         NA
## 54       sample   <NA>                1.000000                         NA
## 55       sample   <NA>                1.000000                         NA
## 56       sample   <NA>                1.000000                         NA
## 57       sample   <NA>                1.000000                         NA
## 58       sample   <NA>                1.000000                         NA
## 59       sample   <NA>                1.000000                         NA
## 60       sample   <NA>                1.000000                         NA
## 61       sample   <NA>                1.000000                         NA
## 62       sample   <NA>                1.000000                         NA
## 63       sample   <NA>                1.000000                         NA
## 64       sample   <NA>                1.000000                         NA
## 65       sample   <NA>                1.000000                         NA
## 66       sample   <NA>                1.000000                         NA
## 67       sample   <NA>                1.000000                         NA
## 68       sample   <NA>                1.000000                         NA
## 69       sample   <NA>                1.000000                         NA
## 70       sample   <NA>                1.000000                         NA
## 71       sample   <NA>                1.000000                         NA
## 72       sample   <NA>                1.000000                         NA
## 73       sample   <NA>                1.000000                         NA
## 74       sample   <NA>                1.000000                         NA
## 75       sample   <NA>                1.000000                         NA
## 76       sample   <NA>                1.000000                         NA
## 77       sample   <NA>                1.000000                         NA
## 78       sample   <NA>                1.000000                         NA
## 79       sample   <NA>                1.000000                         NA
## 80       sample   <NA>                1.000000                         NA
## 81       sample   <NA>                1.000000                         NA
## 82       sample   <NA>                1.000000                         NA
## 83       sample   <NA>                1.000000                         NA
## 84       sample   <NA>                1.000000                         NA
## 85       sample   <NA>                1.000000                         NA
## 86       sample   <NA>                1.000000                         NA
## 87       sample   <NA>                1.000000                         NA
## 88       sample   <NA>                1.000000                         NA
## 89       sample   <NA>                1.000000                         NA
## 90       sample   <NA>                1.000000                         NA
## 91       sample   <NA>                1.000000                         NA
## 92       sample   <NA>                1.000000                         NA
## 93       sample   <NA>                1.000000                         NA
## 94       sample   <NA>                1.000000                         NA
## 95       sample   <NA>                1.000000                         NA
## 96       sample   <NA>                1.000000                         NA
## 97       sample   <NA>                1.000000                         NA
## 98       sample   <NA>                1.000000                         NA
## 99       sample   <NA>                1.000000                         NA
## 100      sample   <NA>                1.000000                         NA
## 101      sample   <NA>                1.000000                         NA
## 102      sample   <NA>                1.000000                         NA
## 103      sample   <NA>                1.000000                         NA
## 104      sample   <NA>                1.000000                         NA
## 105      sample   <NA>                1.000000                         NA
## 106      sample   <NA>                1.000000                         NA
## 107      sample   <NA>                1.000000                         NA
## 108      sample   <NA>                1.000000                         NA
## 109      sample   <NA>                1.000000                         NA
## 110      sample   <NA>                1.000000                         NA
## 111      sample   <NA>                1.000000                         NA
## 112      sample   <NA>                1.000000                         NA
## 113      sample   <NA>                1.000000                         NA
## 114      sample   <NA>                1.000000                         NA
## 115      sample   <NA>                1.000000                         NA
## 116      sample   <NA>                1.000000                         NA
## 117      sample   <NA>                1.000000                         NA
## 118      sample   <NA>                1.000000                         NA
## 119      sample   <NA>                1.000000                         NA
## 120      sample   <NA>                1.000000                         NA
## 121      sample   <NA>                1.000000                         NA
## 122      sample   <NA>                1.000000                         NA
## 123      sample   <NA>                1.000000                         NA
## 124      sample   <NA>                1.000000                         NA
## 125      sample   <NA>                1.000000                         NA
## 126      sample   <NA>                1.000000                         NA
## 127      sample   <NA>                1.000000                         NA
## 128      sample   <NA>                1.000000                         NA
## 129      sample   <NA>                1.000000                         NA
## 130      sample   <NA>                1.000000                         NA
## 131      sample   <NA>                1.000000                         NA
## 132      sample   <NA>                1.000000                         NA
## 133      sample   <NA>                1.000000                         NA
## 134      sample   <NA>                1.000000                         NA
## 135      sample   <NA>                1.000000                         NA
## 136      sample   <NA>                1.000000                         NA
## 137      sample   <NA>                1.000000                         NA
## 138      sample   <NA>                1.000000                         NA
## 139      sample   <NA>                1.000000                         NA
## 140      sample   <NA>                1.000000                         NA
## 141      sample   <NA>                1.000000                         NA
## 142      sample   <NA>                1.000000                         NA
## 143      sample   <NA>                1.000000                         NA
## 144      sample   <NA>                1.000000                         NA
## 145      sample   <NA>                1.000000                         NA
## 146      sample   <NA>                1.000000                         NA
## 147      sample   <NA>                1.000000                         NA
## 148      sample   <NA>                1.000000                         NA
## 149      sample   <NA>                1.000000                         NA
## 150      sample   <NA>                1.000000                         NA
## 151      sample   <NA>                1.000000                         NA
## 152      sample   <NA>                1.000000                         NA
## 153      sample   <NA>                1.000000                         NA
## 154      sample   <NA>                1.000000                         NA
## 155      sample   <NA>                1.000000                         NA
## 156      sample   <NA>                1.000000                         NA
## 157      sample   <NA>                1.000000                         NA
## 158      sample   <NA>                1.000000                         NA
## 159      sample   <NA>                1.000000                         NA
## 160      sample   <NA>                1.000000                         NA
## 161      sample   <NA>                1.000000                         NA
## 162      sample   <NA>                1.000000                         NA
## 163      sample   <NA>                1.000000                         NA
## 164      sample   <NA>                1.000000                         NA
## 165      sample   <NA>                1.000000                         NA
## 166      sample   <NA>                1.000000                         NA
## 167      sample   <NA>                1.000000                         NA
## 168      sample   <NA>                1.000000                         NA
## 169      sample   <NA>                1.000000                         NA
## 170      sample   <NA>                1.000000                         NA
## 171      sample   <NA>                1.000000                         NA
## 172      sample   <NA>                1.000000                         NA
## 173      sample   <NA>                1.000000                         NA
## 174      sample   <NA>                1.000000                         NA
## 175      sample   <NA>                1.000000                         NA
## 176      sample   <NA>                1.000000                         NA
## 177      sample   <NA>                1.000000                         NA
## 178      sample   <NA>                1.000000                         NA
## 179      sample   <NA>                1.000000                         NA
## 180      sample   <NA>                1.000000                         NA
## 181      sample   <NA>                1.000000                         NA
## 182      sample   <NA>                1.000000                         NA
## 183      sample   <NA>                1.000000                         NA
## 184      sample   <NA>                1.000000                         NA
## 185      sample   <NA>                1.000000                         NA
## 186      sample   <NA>                1.000000                         NA
## 187      sample   <NA>                1.000000                         NA
## 188      sample   <NA>                1.000000                         NA
## 189      sample   <NA>                1.000000                         NA
## 190      sample   <NA>                1.000000                         NA
## 191      sample   <NA>                1.000000                         NA
## 192      sample   <NA>                1.000000                         NA
## 193      sample   <NA>                1.000000                         NA
## 194      sample   <NA>                1.000000                         NA
## 195      sample   <NA>                1.000000                         NA
## 196      sample   <NA>                1.000000                         NA
## 197      sample   <NA>                1.000000                         NA
## 198      sample   <NA>                1.000000                         NA
## 199      sample   <NA>                1.000000                         NA
## 200      sample   <NA>                1.000000                         NA
## 201      sample   <NA>                1.000000                         NA
## 202      sample    dry                4.598399                   1.393976
## 203      sample    wet                4.598399                   1.393976
## 204      sample    dry                4.598399                   1.393976
## 205      sample    wet                4.598399                   1.393976
## 206      sample    wet                4.598399                   1.393976
## 207      sample    dry                4.598399                   1.393976
## 208      sample    wet                4.598399                   1.393976
## 209      sample    dry                4.598399                   1.393976
## 210      sample    wet                4.598399                   1.393976
## 211      sample    dry                4.598399                   1.393976
## 212      sample    wet                4.598399                   1.393976
## 213      sample    dry                4.598399                   1.393976
## 214      sample    wet                4.598399                   1.393976
## 215      sample    wet                4.598399                   1.393976
## 216      sample    dry                4.598399                   1.393976
## 217      sample    wet                4.598399                   1.393976
## 218      sample    dry                4.598399                   1.393976
## 219      sample    dry                4.598399                   1.393976
## 220      sample    wet                4.598399                   1.393976
## 221      sample    wet                4.598399                   1.393976
## 222      sample    dry                4.598399                   1.393976
## 223      sample    wet                4.598399                   1.393976
## 224      sample    dry                4.598399                   1.393976
## 225      sample    wet                4.598399                   1.393976
## 226      sample    dry                4.598399                   1.393976
## 227      sample    wet                4.598399                   1.393976
## 228      sample    dry                4.598399                   1.393976
## 229      sample    dry                4.598399                   1.393976
## 230      sample    wet                4.598399                   1.393976
## 231      sample    dry                4.598399                   1.393976
## 232      sample    wet                4.598399                   1.393976
## 233      sample    dry                4.598399                   1.393976
## 234      sample    wet                4.598399                   1.393976
## 235      sample    wet                4.598399                   1.393976
## 236      sample    wet                4.598399                   1.393976
## 237      sample    wet                4.598399                   1.393976
## 238      sample    dry                4.598399                   1.393976
## 239      sample    wet                4.598399                   1.393976
## 240      sample    dry                4.598399                   1.393976
## 241      sample    wet                4.598399                   1.393976
## 242      sample    dry                4.598399                   1.393976
## 243      sample    wet                4.598399                   1.393976
## 244      sample    dry                4.598399                   1.393976
## 245      sample    dry                4.598399                   1.393976
## 246      sample    wet                4.598399                   1.393976
## 247      sample    dry                4.598399                   1.393976
## 248      sample    wet                4.598399                   1.393976
## 249      sample    dry                4.598399                   1.393976
## 250      sample    wet                4.598399                   1.393976
## 251      sample    dry                4.598399                   1.393976
## 252      sample    wet                4.598399                   1.393976
## 253      sample    dry                4.598399                   1.393976
## 254      sample    dry                4.598399                   1.393976
## 255      sample    wet                4.598399                   1.393976
## 256      sample    dry                4.598399                   1.393976
## 257      sample    wet                4.598399                   1.393976
## 258      sample    dry                4.598399                   1.393976
## 259      sample    wet                4.598399                   1.393976
## 260      sample    dry                1.000000                         NA
## 261      sample    wet                1.000000                         NA
## 262      sample    dry                1.000000                         NA
## 263      sample    wet                1.000000                         NA
## 264      sample    dry                1.000000                         NA
## 265      sample    wet                1.000000                         NA
## 266      sample    dry                1.000000                         NA
## 267      sample    wet                1.000000                         NA
## 268      sample    dry                1.000000                         NA
## 269      sample    wet                1.000000                         NA
## 270      sample    dry                1.000000                         NA
## 271      sample    wet                1.000000                         NA
## 272      sample    dry                1.000000                         NA
## 273      sample    dry                1.000000                         NA
## 274      sample    dry                1.000000                         NA
## 275      sample    wet                1.000000                         NA
## 276      sample    wet                1.000000                         NA
## 277      sample    dry                1.000000                         NA
## 278      sample    dry                1.000000                         NA
## 279      sample    dry                1.000000                         NA
## 280      sample    dry                1.000000                         NA
## 281      sample    wet                1.000000                         NA
## 282      sample    wet                1.000000                         NA
## 283      sample    dry                1.000000                         NA
## 284      sample    wet                1.000000                         NA
## 285      sample    wet                1.000000                         NA
## 286      sample    wet                1.000000                         NA
## 287      sample    wet                1.000000                         NA
## 288      sample    wet                1.000000                         NA
## 289      sample    dry                1.000000                         NA
## 290      sample    wet                1.000000                         NA
## 291      sample    dry                1.000000                         NA
## 292      sample    wet                1.000000                         NA
## 293      sample    dry                1.000000                         NA
## 294      sample    wet                1.000000                         NA
## 295      sample    dry                1.000000                         NA
## 296      sample    dry                1.000000                         NA
## 297      sample    wet                1.000000                         NA
## 298      sample    dry                1.000000                         NA
## 299      sample    wet                1.000000                         NA
## 300      sample    wet                1.000000                         NA
## 301      sample    dry                1.000000                         NA
## 302      sample    wet                1.000000                         NA
## 303      sample    dry                1.000000                         NA
## 304      sample    wet                1.000000                         NA
## 305      sample    dry                1.000000                         NA
## 306      sample    wet                1.000000                         NA
## 307      sample    dry                1.000000                         NA
## 308      sample    wet                1.000000                         NA
##     fiber.correction.factor.n particles.L.blank.corrected.fiber.corrected
## 1                          NA                                1.630000e+00
## 2                          NA                                1.650000e+00
## 3                          NA                                7.200000e+00
## 4                          NA                                5.630000e+00
## 5                          NA                                4.940000e+00
## 6                          NA                                8.430000e+00
## 7                          NA                                1.006000e+01
## 8                          NA                                2.310000e+00
## 9                          NA                                1.090000e+00
## 10                         NA                                1.784000e+01
## 11                         NA                                1.236000e+01
## 12                         NA                                2.441000e+01
## 13                         NA                                6.450000e-02
## 14                         NA                                1.150000e-02
## 15                         NA                                1.778000e-01
## 16                         NA                                4.210000e-02
## 17                         NA                                3.000000e-03
## 18                         NA                                5.400000e-03
## 19                         NA                                1.860000e-02
## 20                         NA                                2.330000e-02
## 21                         NA                                2.220000e-02
## 22                         NA                                7.780000e-02
## 23                         NA                                3.700000e-03
## 24                         NA                                5.500000e-03
## 25                         NA                                1.083000e-01
## 26                         NA                                1.593000e-01
## 27                         NA                                1.816000e-01
## 28                         NA                                7.500000e-03
## 29                         NA                                6.830000e-02
## 30                         NA                                          NA
## 31                         NA                                          NA
## 32                         NA                                          NA
## 33                         NA                                          NA
## 34                         NA                                          NA
## 35                         NA                                          NA
## 36                         NA                                          NA
## 37                         NA                                          NA
## 38                         NA                                          NA
## 39                         NA                                          NA
## 40                         NA                                          NA
## 41                         NA                                          NA
## 42                         NA                                          NA
## 43                         NA                                          NA
## 44                         NA                                          NA
## 45                         NA                                          NA
## 46                         NA                                          NA
## 47                         NA                                          NA
## 48                         NA                                          NA
## 49                         NA                                          NA
## 50                         NA                                          NA
## 51                         NA                                          NA
## 52                         NA                                          NA
## 53                         NA                                          NA
## 54                         NA                                          NA
## 55                         NA                                          NA
## 56                         NA                                          NA
## 57                         NA                                          NA
## 58                         NA                                          NA
## 59                         NA                                          NA
## 60                         NA                                          NA
## 61                         NA                                          NA
## 62                         NA                                          NA
## 63                         NA                                          NA
## 64                         NA                                          NA
## 65                         NA                                          NA
## 66                         NA                                          NA
## 67                         NA                                          NA
## 68                         NA                                          NA
## 69                         NA                                          NA
## 70                         NA                                          NA
## 71                         NA                                          NA
## 72                         NA                                          NA
## 73                         NA                                          NA
## 74                         NA                                          NA
## 75                         NA                                          NA
## 76                         NA                                          NA
## 77                         NA                                          NA
## 78                         NA                                          NA
## 79                         NA                                          NA
## 80                         NA                                          NA
## 81                         NA                                          NA
## 82                         NA                                          NA
## 83                         NA                                          NA
## 84                         NA                                          NA
## 85                         NA                                          NA
## 86                         NA                                          NA
## 87                         NA                                          NA
## 88                         NA                                          NA
## 89                         NA                                          NA
## 90                         NA                                          NA
## 91                         NA                                          NA
## 92                         NA                                          NA
## 93                         NA                                          NA
## 94                         NA                                          NA
## 95                         NA                                          NA
## 96                         NA                                          NA
## 97                         NA                                          NA
## 98                         NA                                          NA
## 99                         NA                                          NA
## 100                        NA                                          NA
## 101                        NA                                          NA
## 102                        NA                                          NA
## 103                        NA                                          NA
## 104                        NA                                          NA
## 105                        NA                                          NA
## 106                        NA                                          NA
## 107                        NA                                          NA
## 108                        NA                                          NA
## 109                        NA                                          NA
## 110                        NA                                          NA
## 111                        NA                                          NA
## 112                        NA                                          NA
## 113                        NA                                          NA
## 114                        NA                                          NA
## 115                        NA                                          NA
## 116                        NA                                          NA
## 117                        NA                                          NA
## 118                        NA                                          NA
## 119                        NA                                          NA
## 120                        NA                                          NA
## 121                        NA                                          NA
## 122                        NA                                          NA
## 123                        NA                                          NA
## 124                        NA                                          NA
## 125                        NA                                          NA
## 126                        NA                                          NA
## 127                        NA                                          NA
## 128                        NA                                          NA
## 129                        NA                                          NA
## 130                        NA                                          NA
## 131                        NA                                          NA
## 132                        NA                                          NA
## 133                        NA                                          NA
## 134                        NA                                          NA
## 135                        NA                                          NA
## 136                        NA                                          NA
## 137                        NA                                          NA
## 138                        NA                                          NA
## 139                        NA                                          NA
## 140                        NA                                          NA
## 141                        NA                                          NA
## 142                        NA                                          NA
## 143                        NA                                          NA
## 144                        NA                                          NA
## 145                        NA                                          NA
## 146                        NA                                          NA
## 147                        NA                                          NA
## 148                        NA                                          NA
## 149                        NA                                          NA
## 150                        NA                                          NA
## 151                        NA                                          NA
## 152                        NA                                          NA
## 153                        NA                                          NA
## 154                        NA                                          NA
## 155                        NA                                          NA
## 156                        NA                                          NA
## 157                        NA                                          NA
## 158                        NA                                          NA
## 159                        NA                                          NA
## 160                        NA                                          NA
## 161                        NA                                          NA
## 162                        NA                                          NA
## 163                        NA                                          NA
## 164                        NA                                          NA
## 165                        NA                                          NA
## 166                        NA                                          NA
## 167                        NA                                          NA
## 168                        NA                                          NA
## 169                        NA                                          NA
## 170                        NA                                          NA
## 171                        NA                                          NA
## 172                        NA                                          NA
## 173                        NA                                          NA
## 174                        NA                                          NA
## 175                        NA                                          NA
## 176                        NA                                          NA
## 177                        NA                                          NA
## 178                        NA                                          NA
## 179                        NA                                          NA
## 180                        NA                                          NA
## 181                        NA                                          NA
## 182                        NA                                          NA
## 183                        NA                                          NA
## 184                        NA                                          NA
## 185                        NA                                          NA
## 186                        NA                                          NA
## 187                        NA                                          NA
## 188                        NA                                          NA
## 189                        NA                                          NA
## 190                        NA                                          NA
## 191                        NA                                          NA
## 192                        NA                                          NA
## 193                        NA                                          NA
## 194                        NA                                          NA
## 195                        NA                                          NA
## 196                        NA                                          NA
## 197                        NA                                          NA
## 198                        NA                                          NA
## 199                        NA                                          NA
## 200                        NA                                          NA
## 201                        NA                                          NA
## 202                         9                                1.057632e-04
## 203                         9                                2.811461e-02
## 204                         9                                2.018697e-03
## 205                         9                                8.681777e-03
## 206                         9                                2.349782e-03
## 207                         9                                3.816671e-04
## 208                         9                                2.133657e-03
## 209                         9                                3.559161e-03
## 210                         9                                3.352233e-03
## 211                         9                                1.041537e-02
## 212                         9                                1.997085e-02
## 213                         9                                8.644990e-04
## 214                         9                                2.556296e-01
## 215                         9                                4.046591e-04
## 216                         9                                7.495391e-04
## 217                         9                                5.793983e-04
## 218                         9                                6.391775e-04
## 219                         9                                0.000000e+00
## 220                         9                                1.057632e-04
## 221                         9                                1.002451e-03
## 222                         9                                9.196798e-05
## 223                         9                                3.632735e-04
## 224                         9                                6.391775e-04
## 225                         9                                3.586751e-04
## 226                         9                                2.299200e-05
## 227                         9                                4.414463e-04
## 228                         9                                2.575103e-04
## 229                         9                                4.515628e-03
## 230                         9                                1.223174e-03
## 231                         9                                1.641628e-03
## 232                         9                                1.140403e-03
## 233                         9                                7.035551e-04
## 234                         9                                2.372774e-03
## 235                         9                                1.820966e-03
## 236                         9                                1.351929e-03
## 237                         9                                1.255363e-03
## 238                         9                                8.736958e-05
## 239                         9                                1.747392e-04
## 240                         9                                3.126911e-04
## 241                         9                                2.483136e-04
## 242                         9                                1.747392e-04
## 243                         9                                3.126911e-04
## 244                         9                                1.103616e-04
## 245                         9                                5.150207e-04
## 246                         9                                1.085222e-03
## 247                         9                                8.323102e-04
## 248                         9                                1.197883e-02
## 249                         9                                5.885951e-04
## 250                         9                                2.244019e-03
## 251                         9                                1.333076e-02
## 252                         9                                6.364184e-03
## 253                         9                                1.958918e-03
## 254                         9                                2.713055e-04
## 255                         9                                4.230527e-04
## 256                         9                                2.929180e-03
## 257                         9                                6.479144e-03
## 258                         9                                3.724703e-04
## 259                         9                                6.023903e-04
## 260                        NA                                3.465347e+00
## 261                        NA                                2.734878e+00
## 262                        NA                                7.433102e+00
## 263                        NA                                6.277464e-01
## 264                        NA                                1.950959e+00
## 265                        NA                                4.984424e+00
## 266                        NA                                2.325107e+00
## 267                        NA                                1.582779e+00
## 268                        NA                                2.703562e+00
## 269                        NA                                2.551020e+00
## 270                        NA                                6.578947e+00
## 271                        NA                                1.871102e+01
## 272                        NA                                3.000000e+00
## 273                        NA                                1.640420e+00
## 274                        NA                                8.671523e+00
## 275                        NA                                6.523157e-01
## 276                        NA                                0.000000e+00
## 277                        NA                                1.811594e+00
## 278                        NA                                7.095745e-01
## 279                        NA                                1.262626e+00
## 280                        NA                                3.664755e+00
## 281                        NA                                3.098500e+00
## 282                        NA                                1.279591e+00
## 283                        NA                                7.619048e+00
## 284                        NA                                2.412281e+00
## 285                        NA                                1.357323e+01
## 286                        NA                                2.383222e+00
## 287                        NA                                9.433962e-01
## 288                        NA                                3.570315e+01
## 289                        NA                                2.252599e+00
## 290                        NA                                2.202268e+00
## 291                        NA                                1.605652e+00
## 292                        NA                                4.269450e+00
## 293                        NA                                3.502069e+00
## 294                        NA                                1.876590e+01
## 295                        NA                                6.298450e+00
## 296                        NA                                9.980040e-01
## 297                        NA                                6.144393e+00
## 298                        NA                                3.346080e+00
## 299                        NA                                1.595745e+00
## 300                        NA                                2.666667e+00
## 301                        NA                                4.338395e+00
## 302                        NA                                9.931383e+00
## 303                        NA                                3.333333e+00
## 304                        NA                                2.833333e+00
## 305                        NA                                5.086072e+00
## 306                        NA                                5.243089e+00
## 307                        NA                                2.764613e+00
## 308                        NA                                4.427577e+00
##                   locationNew                matrix
## 1                     general                 Storm
## 2                     general                 Storm
## 3                     general                 Storm
## 4                     general                 Storm
## 5                     general                 Storm
## 6                     general                 Storm
## 7                     general                 Storm
## 8                     general                 Storm
## 9                     general                 Storm
## 10                    general                 Storm
## 11                    general                 Storm
## 12                    general                 Storm
## 13                    general                  WWTP
## 14                    general                  WWTP
## 15                    general                  WWTP
## 16                    general                  WWTP
## 17                    general                  WWTP
## 18                    general                  WWTP
## 19                    general                  WWTP
## 20                    general                  WWTP
## 21                    general                  WWTP
## 22                    general                  WWTP
## 23                    general                  WWTP
## 24                    general                  WWTP
## 25                    general                  WWTP
## 26                    general                  WWTP
## 27                    general                  WWTP
## 28                    general                  WWTP
## 29                    general                  WWTP
## 30            Lower South Bay                  Fish
## 31            Lower South Bay                  Fish
## 32            Lower South Bay                  Fish
## 33            Lower South Bay                  Fish
## 34            Lower South Bay                  Fish
## 35            Lower South Bay                  Fish
## 36            Lower South Bay                  Fish
## 37            Lower South Bay                  Fish
## 38            Lower South Bay                  Fish
## 39            Lower South Bay                  Fish
## 40            Lower South Bay                  Fish
## 41            Lower South Bay                  Fish
## 42            Lower South Bay                  Fish
## 43            Lower South Bay                  Fish
## 44                Tomales Bay                  Fish
## 45                Tomales Bay                  Fish
## 46                Tomales Bay                  Fish
## 47                Tomales Bay                  Fish
## 48                Tomales Bay                  Fish
## 49                Tomales Bay                  Fish
## 50                Tomales Bay                  Fish
## 51                Tomales Bay                  Fish
## 52                Tomales Bay                  Fish
## 53                Tomales Bay                  Fish
## 54                Tomales Bay                  Fish
## 55                Tomales Bay                  Fish
## 56                Tomales Bay                  Fish
## 57                Tomales Bay                  Fish
## 58                Tomales Bay                  Fish
## 59                Tomales Bay                  Fish
## 60                Tomales Bay                  Fish
## 61                Tomales Bay                  Fish
## 62                Tomales Bay                  Fish
## 63                Tomales Bay                  Fish
## 64                Tomales Bay                  Fish
## 65                Tomales Bay                  Fish
## 66                Tomales Bay                  Fish
## 67                Tomales Bay                  Fish
## 68                Tomales Bay                  Fish
## 69                Tomales Bay                  Fish
## 70                Tomales Bay                  Fish
## 71                Tomales Bay                  Fish
## 72                Tomales Bay                  Fish
## 73                Tomales Bay                  Fish
## 74                Central Bay                  Fish
## 75                Central Bay                  Fish
## 76                Central Bay                  Fish
## 77                Central Bay                  Fish
## 78                Central Bay                  Fish
## 79                Central Bay                  Fish
## 80                Central Bay                  Fish
## 81                Central Bay                  Fish
## 82                Central Bay                  Fish
## 83                Central Bay                  Fish
## 84                Central Bay                  Fish
## 85                Central Bay                  Fish
## 86                Central Bay                  Fish
## 87                Central Bay                  Fish
## 88                Central Bay                  Fish
## 89                Central Bay                  Fish
## 90                Central Bay                  Fish
## 91                Central Bay                  Fish
## 92                Central Bay                  Fish
## 93                Central Bay                  Fish
## 94                Central Bay                  Fish
## 95                Central Bay                  Fish
## 96                Central Bay                  Fish
## 97                Central Bay                  Fish
## 98                Central Bay                  Fish
## 99                Central Bay                  Fish
## 100               Central Bay                  Fish
## 101               Central Bay                  Fish
## 102               Central Bay                  Fish
## 103               Central Bay                  Fish
## 104               Central Bay                  Fish
## 105               Central Bay                  Fish
## 106               Central Bay                  Fish
## 107               Central Bay                  Fish
## 108               Central Bay                  Fish
## 109               Central Bay                  Fish
## 110               Central Bay                  Fish
## 111               Central Bay                  Fish
## 112                   general                  Fish
## 113                   general                  Fish
## 114                   general                  Fish
## 115                   general                  Fish
## 116                   general                  Fish
## 117                   general                  Fish
## 118                   general                  Fish
## 119                   general                  Fish
## 120                   general                  Fish
## 121                   general                  Fish
## 122                 South Bay                  Fish
## 123                 South Bay                  Fish
## 124                 South Bay                  Fish
## 125                 South Bay                  Fish
## 126                 South Bay                  Fish
## 127                 South Bay                  Fish
## 128                 South Bay                  Fish
## 129                 South Bay                  Fish
## 130                 South Bay                  Fish
## 131                 South Bay                  Fish
## 132                 South Bay                  Fish
## 133                 South Bay                  Fish
## 134                 South Bay                  Fish
## 135                 South Bay                  Fish
## 136                 South Bay                  Fish
## 137                 South Bay                  Fish
## 138                 South Bay                  Fish
## 139                 South Bay                  Fish
## 140                 South Bay                  Fish
## 141                 South Bay                  Fish
## 142               Central Bay                  Fish
## 143               Central Bay                  Fish
## 144               Central Bay                  Fish
## 145               Central Bay                  Fish
## 146               Central Bay                  Fish
## 147               Central Bay                  Fish
## 148               Central Bay                  Fish
## 149               Central Bay                  Fish
## 150               Central Bay                  Fish
## 151               Central Bay                  Fish
## 152               Central Bay                  Fish
## 153               Central Bay                  Fish
## 154               Central Bay                  Fish
## 155               Central Bay                  Fish
## 156               Central Bay                  Fish
## 157               Central Bay                  Fish
## 158               Central Bay                  Fish
## 159               Central Bay                  Fish
## 160               Central Bay                  Fish
## 161               Central Bay                  Fish
## 162                   general                  Fish
## 163                   general                  Fish
## 164                   general                  Fish
## 165                   general                  Fish
## 166                   general                  Fish
## 167                   general                  Fish
## 168                   general                  Fish
## 169                   general                  Fish
## 170                   general                  Fish
## 171                   general                  Fish
## 172               Tomales Bay                  Fish
## 173               Tomales Bay                  Fish
## 174               Tomales Bay                  Fish
## 175               Tomales Bay                  Fish
## 176               Tomales Bay                  Fish
## 177               Tomales Bay                  Fish
## 178               Tomales Bay                  Fish
## 179               Tomales Bay                  Fish
## 180               Tomales Bay                  Fish
## 181               Tomales Bay                  Fish
## 182                   general              Sediment
## 183               Central Bay              Sediment
## 184               Central Bay              Sediment
## 185               Central Bay              Sediment
## 186               Central Bay              Sediment
## 187           Lower South Bay              Sediment
## 188           Lower South Bay              Sediment
## 189           Lower South Bay              Sediment
## 190                   general              Sediment
## 191                 South Bay              Sediment
## 192                 South Bay              Sediment
## 193                 South Bay              Sediment
## 194                   general              Sediment
## 195                   general              Sediment
## 196                   general              Sediment
## 197                   general              Sediment
## 198                   general              Sediment
## 199                   general              Sediment
## 200               Tomales Bay              Sediment
## 201               Tomales Bay              Sediment
## 202               Central Bay Surface (Manta Trawl)
## 203               Central Bay Surface (Manta Trawl)
## 204               Central Bay Surface (Manta Trawl)
## 205               Central Bay Surface (Manta Trawl)
## 206               Central Bay Surface (Manta Trawl)
## 207               Central Bay Surface (Manta Trawl)
## 208               Central Bay Surface (Manta Trawl)
## 209               Central Bay Surface (Manta Trawl)
## 210               Central Bay Surface (Manta Trawl)
## 211               Central Bay Surface (Manta Trawl)
## 212               Central Bay Surface (Manta Trawl)
## 213               Central Bay Surface (Manta Trawl)
## 214               Central Bay Surface (Manta Trawl)
## 215 National Marine Sanctuary Surface (Manta Trawl)
## 216 National Marine Sanctuary Surface (Manta Trawl)
## 217 National Marine Sanctuary Surface (Manta Trawl)
## 218 National Marine Sanctuary Surface (Manta Trawl)
## 219 National Marine Sanctuary Surface (Manta Trawl)
## 220 National Marine Sanctuary Surface (Manta Trawl)
## 221 National Marine Sanctuary Surface (Manta Trawl)
## 222 National Marine Sanctuary Surface (Manta Trawl)
## 223 National Marine Sanctuary Surface (Manta Trawl)
## 224 National Marine Sanctuary Surface (Manta Trawl)
## 225 National Marine Sanctuary Surface (Manta Trawl)
## 226 National Marine Sanctuary Surface (Manta Trawl)
## 227 National Marine Sanctuary Surface (Manta Trawl)
## 228 National Marine Sanctuary Surface (Manta Trawl)
## 229           Lower South Bay Surface (Manta Trawl)
## 230           Lower South Bay Surface (Manta Trawl)
## 231           Lower South Bay Surface (Manta Trawl)
## 232           Lower South Bay Surface (Manta Trawl)
## 233           Lower South Bay Surface (Manta Trawl)
## 234           Lower South Bay Surface (Manta Trawl)
## 235 National Marine Sanctuary Surface (Manta Trawl)
## 236 National Marine Sanctuary Surface (Manta Trawl)
## 237 National Marine Sanctuary Surface (Manta Trawl)
## 238 National Marine Sanctuary Surface (Manta Trawl)
## 239 National Marine Sanctuary Surface (Manta Trawl)
## 240 National Marine Sanctuary Surface (Manta Trawl)
## 241 National Marine Sanctuary Surface (Manta Trawl)
## 242 National Marine Sanctuary Surface (Manta Trawl)
## 243 National Marine Sanctuary Surface (Manta Trawl)
## 244 National Marine Sanctuary Surface (Manta Trawl)
## 245                 South Bay Surface (Manta Trawl)
## 246                 South Bay Surface (Manta Trawl)
## 247                 South Bay Surface (Manta Trawl)
## 248                 South Bay Surface (Manta Trawl)
## 249                 South Bay Surface (Manta Trawl)
## 250                 South Bay Surface (Manta Trawl)
## 251                 South Bay Surface (Manta Trawl)
## 252                 South Bay Surface (Manta Trawl)
## 253                   general Surface (Manta Trawl)
## 254                   general Surface (Manta Trawl)
## 255                   general Surface (Manta Trawl)
## 256                   general Surface (Manta Trawl)
## 257                   general Surface (Manta Trawl)
## 258                   general Surface (Manta Trawl)
## 259                   general Surface (Manta Trawl)
## 260               Central Bay     Surface (1L-grab)
## 261               Central Bay     Surface (1L-grab)
## 262               Central Bay     Surface (1L-grab)
## 263               Central Bay     Surface (1L-grab)
## 264               Central Bay     Surface (1L-grab)
## 265               Central Bay     Surface (1L-grab)
## 266               Central Bay     Surface (1L-grab)
## 267               Central Bay     Surface (1L-grab)
## 268               Central Bay     Surface (1L-grab)
## 269               Central Bay     Surface (1L-grab)
## 270               Central Bay     Surface (1L-grab)
## 271               Central Bay     Surface (1L-grab)
## 272 National Marine Sanctuary     Surface (1L-grab)
## 273 National Marine Sanctuary     Surface (1L-grab)
## 274 National Marine Sanctuary     Surface (1L-grab)
## 275 National Marine Sanctuary     Surface (1L-grab)
## 276 National Marine Sanctuary     Surface (1L-grab)
## 277 National Marine Sanctuary     Surface (1L-grab)
## 278 National Marine Sanctuary     Surface (1L-grab)
## 279 National Marine Sanctuary     Surface (1L-grab)
## 280 National Marine Sanctuary     Surface (1L-grab)
## 281           Lower South Bay     Surface (1L-grab)
## 282           Lower South Bay     Surface (1L-grab)
## 283           Lower South Bay     Surface (1L-grab)
## 284           Lower South Bay     Surface (1L-grab)
## 285 National Marine Sanctuary     Surface (1L-grab)
## 286 National Marine Sanctuary     Surface (1L-grab)
## 287 National Marine Sanctuary     Surface (1L-grab)
## 288 National Marine Sanctuary     Surface (1L-grab)
## 289 National Marine Sanctuary     Surface (1L-grab)
## 290 National Marine Sanctuary     Surface (1L-grab)
## 291 National Marine Sanctuary     Surface (1L-grab)
## 292 National Marine Sanctuary     Surface (1L-grab)
## 293 National Marine Sanctuary     Surface (1L-grab)
## 294 National Marine Sanctuary     Surface (1L-grab)
## 295 National Marine Sanctuary     Surface (1L-grab)
## 296                 South Bay     Surface (1L-grab)
## 297                 South Bay     Surface (1L-grab)
## 298                 South Bay     Surface (1L-grab)
## 299                 South Bay     Surface (1L-grab)
## 300                 South Bay     Surface (1L-grab)
## 301                 South Bay     Surface (1L-grab)
## 302                 South Bay     Surface (1L-grab)
## 303                   general     Surface (1L-grab)
## 304                   general     Surface (1L-grab)
## 305                   general     Surface (1L-grab)
## 306                   general     Surface (1L-grab)
## 307                   general     Surface (1L-grab)
## 308                   general     Surface (1L-grab)
##                                      locationMatrix
## 1                                     general Storm
## 2                                     general Storm
## 3                                     general Storm
## 4                                     general Storm
## 5                                     general Storm
## 6                                     general Storm
## 7                                     general Storm
## 8                                     general Storm
## 9                                     general Storm
## 10                                    general Storm
## 11                                    general Storm
## 12                                    general Storm
## 13                                     general WWTP
## 14                                     general WWTP
## 15                                     general WWTP
## 16                                     general WWTP
## 17                                     general WWTP
## 18                                     general WWTP
## 19                                     general WWTP
## 20                                     general WWTP
## 21                                     general WWTP
## 22                                     general WWTP
## 23                                     general WWTP
## 24                                     general WWTP
## 25                                     general WWTP
## 26                                     general WWTP
## 27                                     general WWTP
## 28                                     general WWTP
## 29                                     general WWTP
## 30                             Lower South Bay Fish
## 31                             Lower South Bay Fish
## 32                             Lower South Bay Fish
## 33                             Lower South Bay Fish
## 34                             Lower South Bay Fish
## 35                             Lower South Bay Fish
## 36                             Lower South Bay Fish
## 37                             Lower South Bay Fish
## 38                             Lower South Bay Fish
## 39                             Lower South Bay Fish
## 40                             Lower South Bay Fish
## 41                             Lower South Bay Fish
## 42                             Lower South Bay Fish
## 43                             Lower South Bay Fish
## 44                                 Tomales Bay Fish
## 45                                 Tomales Bay Fish
## 46                                 Tomales Bay Fish
## 47                                 Tomales Bay Fish
## 48                                 Tomales Bay Fish
## 49                                 Tomales Bay Fish
## 50                                 Tomales Bay Fish
## 51                                 Tomales Bay Fish
## 52                                 Tomales Bay Fish
## 53                                 Tomales Bay Fish
## 54                                 Tomales Bay Fish
## 55                                 Tomales Bay Fish
## 56                                 Tomales Bay Fish
## 57                                 Tomales Bay Fish
## 58                                 Tomales Bay Fish
## 59                                 Tomales Bay Fish
## 60                                 Tomales Bay Fish
## 61                                 Tomales Bay Fish
## 62                                 Tomales Bay Fish
## 63                                 Tomales Bay Fish
## 64                                 Tomales Bay Fish
## 65                                 Tomales Bay Fish
## 66                                 Tomales Bay Fish
## 67                                 Tomales Bay Fish
## 68                                 Tomales Bay Fish
## 69                                 Tomales Bay Fish
## 70                                 Tomales Bay Fish
## 71                                 Tomales Bay Fish
## 72                                 Tomales Bay Fish
## 73                                 Tomales Bay Fish
## 74                                 Central Bay Fish
## 75                                 Central Bay Fish
## 76                                 Central Bay Fish
## 77                                 Central Bay Fish
## 78                                 Central Bay Fish
## 79                                 Central Bay Fish
## 80                                 Central Bay Fish
## 81                                 Central Bay Fish
## 82                                 Central Bay Fish
## 83                                 Central Bay Fish
## 84                                 Central Bay Fish
## 85                                 Central Bay Fish
## 86                                 Central Bay Fish
## 87                                 Central Bay Fish
## 88                                 Central Bay Fish
## 89                                 Central Bay Fish
## 90                                 Central Bay Fish
## 91                                 Central Bay Fish
## 92                                 Central Bay Fish
## 93                                 Central Bay Fish
## 94                                 Central Bay Fish
## 95                                 Central Bay Fish
## 96                                 Central Bay Fish
## 97                                 Central Bay Fish
## 98                                 Central Bay Fish
## 99                                 Central Bay Fish
## 100                                Central Bay Fish
## 101                                Central Bay Fish
## 102                                Central Bay Fish
## 103                                Central Bay Fish
## 104                                Central Bay Fish
## 105                                Central Bay Fish
## 106                                Central Bay Fish
## 107                                Central Bay Fish
## 108                                Central Bay Fish
## 109                                Central Bay Fish
## 110                                Central Bay Fish
## 111                                Central Bay Fish
## 112                                    general Fish
## 113                                    general Fish
## 114                                    general Fish
## 115                                    general Fish
## 116                                    general Fish
## 117                                    general Fish
## 118                                    general Fish
## 119                                    general Fish
## 120                                    general Fish
## 121                                    general Fish
## 122                                  South Bay Fish
## 123                                  South Bay Fish
## 124                                  South Bay Fish
## 125                                  South Bay Fish
## 126                                  South Bay Fish
## 127                                  South Bay Fish
## 128                                  South Bay Fish
## 129                                  South Bay Fish
## 130                                  South Bay Fish
## 131                                  South Bay Fish
## 132                                  South Bay Fish
## 133                                  South Bay Fish
## 134                                  South Bay Fish
## 135                                  South Bay Fish
## 136                                  South Bay Fish
## 137                                  South Bay Fish
## 138                                  South Bay Fish
## 139                                  South Bay Fish
## 140                                  South Bay Fish
## 141                                  South Bay Fish
## 142                                Central Bay Fish
## 143                                Central Bay Fish
## 144                                Central Bay Fish
## 145                                Central Bay Fish
## 146                                Central Bay Fish
## 147                                Central Bay Fish
## 148                                Central Bay Fish
## 149                                Central Bay Fish
## 150                                Central Bay Fish
## 151                                Central Bay Fish
## 152                                Central Bay Fish
## 153                                Central Bay Fish
## 154                                Central Bay Fish
## 155                                Central Bay Fish
## 156                                Central Bay Fish
## 157                                Central Bay Fish
## 158                                Central Bay Fish
## 159                                Central Bay Fish
## 160                                Central Bay Fish
## 161                                Central Bay Fish
## 162                                    general Fish
## 163                                    general Fish
## 164                                    general Fish
## 165                                    general Fish
## 166                                    general Fish
## 167                                    general Fish
## 168                                    general Fish
## 169                                    general Fish
## 170                                    general Fish
## 171                                    general Fish
## 172                                Tomales Bay Fish
## 173                                Tomales Bay Fish
## 174                                Tomales Bay Fish
## 175                                Tomales Bay Fish
## 176                                Tomales Bay Fish
## 177                                Tomales Bay Fish
## 178                                Tomales Bay Fish
## 179                                Tomales Bay Fish
## 180                                Tomales Bay Fish
## 181                                Tomales Bay Fish
## 182                                general Sediment
## 183                            Central Bay Sediment
## 184                            Central Bay Sediment
## 185                            Central Bay Sediment
## 186                            Central Bay Sediment
## 187                        Lower South Bay Sediment
## 188                        Lower South Bay Sediment
## 189                        Lower South Bay Sediment
## 190                                general Sediment
## 191                              South Bay Sediment
## 192                              South Bay Sediment
## 193                              South Bay Sediment
## 194                                general Sediment
## 195                                general Sediment
## 196                                general Sediment
## 197                                general Sediment
## 198                                general Sediment
## 199                                general Sediment
## 200                            Tomales Bay Sediment
## 201                            Tomales Bay Sediment
## 202               Central Bay Surface (Manta Trawl)
## 203               Central Bay Surface (Manta Trawl)
## 204               Central Bay Surface (Manta Trawl)
## 205               Central Bay Surface (Manta Trawl)
## 206               Central Bay Surface (Manta Trawl)
## 207               Central Bay Surface (Manta Trawl)
## 208               Central Bay Surface (Manta Trawl)
## 209               Central Bay Surface (Manta Trawl)
## 210               Central Bay Surface (Manta Trawl)
## 211               Central Bay Surface (Manta Trawl)
## 212               Central Bay Surface (Manta Trawl)
## 213               Central Bay Surface (Manta Trawl)
## 214               Central Bay Surface (Manta Trawl)
## 215 National Marine Sanctuary Surface (Manta Trawl)
## 216 National Marine Sanctuary Surface (Manta Trawl)
## 217 National Marine Sanctuary Surface (Manta Trawl)
## 218 National Marine Sanctuary Surface (Manta Trawl)
## 219 National Marine Sanctuary Surface (Manta Trawl)
## 220 National Marine Sanctuary Surface (Manta Trawl)
## 221 National Marine Sanctuary Surface (Manta Trawl)
## 222 National Marine Sanctuary Surface (Manta Trawl)
## 223 National Marine Sanctuary Surface (Manta Trawl)
## 224 National Marine Sanctuary Surface (Manta Trawl)
## 225 National Marine Sanctuary Surface (Manta Trawl)
## 226 National Marine Sanctuary Surface (Manta Trawl)
## 227 National Marine Sanctuary Surface (Manta Trawl)
## 228 National Marine Sanctuary Surface (Manta Trawl)
## 229           Lower South Bay Surface (Manta Trawl)
## 230           Lower South Bay Surface (Manta Trawl)
## 231           Lower South Bay Surface (Manta Trawl)
## 232           Lower South Bay Surface (Manta Trawl)
## 233           Lower South Bay Surface (Manta Trawl)
## 234           Lower South Bay Surface (Manta Trawl)
## 235 National Marine Sanctuary Surface (Manta Trawl)
## 236 National Marine Sanctuary Surface (Manta Trawl)
## 237 National Marine Sanctuary Surface (Manta Trawl)
## 238 National Marine Sanctuary Surface (Manta Trawl)
## 239 National Marine Sanctuary Surface (Manta Trawl)
## 240 National Marine Sanctuary Surface (Manta Trawl)
## 241 National Marine Sanctuary Surface (Manta Trawl)
## 242 National Marine Sanctuary Surface (Manta Trawl)
## 243 National Marine Sanctuary Surface (Manta Trawl)
## 244 National Marine Sanctuary Surface (Manta Trawl)
## 245                 South Bay Surface (Manta Trawl)
## 246                 South Bay Surface (Manta Trawl)
## 247                 South Bay Surface (Manta Trawl)
## 248                 South Bay Surface (Manta Trawl)
## 249                 South Bay Surface (Manta Trawl)
## 250                 South Bay Surface (Manta Trawl)
## 251                 South Bay Surface (Manta Trawl)
## 252                 South Bay Surface (Manta Trawl)
## 253                   general Surface (Manta Trawl)
## 254                   general Surface (Manta Trawl)
## 255                   general Surface (Manta Trawl)
## 256                   general Surface (Manta Trawl)
## 257                   general Surface (Manta Trawl)
## 258                   general Surface (Manta Trawl)
## 259                   general Surface (Manta Trawl)
## 260                   Central Bay Surface (1L-grab)
## 261                   Central Bay Surface (1L-grab)
## 262                   Central Bay Surface (1L-grab)
## 263                   Central Bay Surface (1L-grab)
## 264                   Central Bay Surface (1L-grab)
## 265                   Central Bay Surface (1L-grab)
## 266                   Central Bay Surface (1L-grab)
## 267                   Central Bay Surface (1L-grab)
## 268                   Central Bay Surface (1L-grab)
## 269                   Central Bay Surface (1L-grab)
## 270                   Central Bay Surface (1L-grab)
## 271                   Central Bay Surface (1L-grab)
## 272     National Marine Sanctuary Surface (1L-grab)
## 273     National Marine Sanctuary Surface (1L-grab)
## 274     National Marine Sanctuary Surface (1L-grab)
## 275     National Marine Sanctuary Surface (1L-grab)
## 276     National Marine Sanctuary Surface (1L-grab)
## 277     National Marine Sanctuary Surface (1L-grab)
## 278     National Marine Sanctuary Surface (1L-grab)
## 279     National Marine Sanctuary Surface (1L-grab)
## 280     National Marine Sanctuary Surface (1L-grab)
## 281               Lower South Bay Surface (1L-grab)
## 282               Lower South Bay Surface (1L-grab)
## 283               Lower South Bay Surface (1L-grab)
## 284               Lower South Bay Surface (1L-grab)
## 285     National Marine Sanctuary Surface (1L-grab)
## 286     National Marine Sanctuary Surface (1L-grab)
## 287     National Marine Sanctuary Surface (1L-grab)
## 288     National Marine Sanctuary Surface (1L-grab)
## 289     National Marine Sanctuary Surface (1L-grab)
## 290     National Marine Sanctuary Surface (1L-grab)
## 291     National Marine Sanctuary Surface (1L-grab)
## 292     National Marine Sanctuary Surface (1L-grab)
## 293     National Marine Sanctuary Surface (1L-grab)
## 294     National Marine Sanctuary Surface (1L-grab)
## 295     National Marine Sanctuary Surface (1L-grab)
## 296                     South Bay Surface (1L-grab)
## 297                     South Bay Surface (1L-grab)
## 298                     South Bay Surface (1L-grab)
## 299                     South Bay Surface (1L-grab)
## 300                     South Bay Surface (1L-grab)
## 301                     South Bay Surface (1L-grab)
## 302                     South Bay Surface (1L-grab)
## 303                       general Surface (1L-grab)
## 304                       general Surface (1L-grab)
## 305                       general Surface (1L-grab)
## 306                       general Surface (1L-grab)
## 307                       general Surface (1L-grab)
## 308                       general Surface (1L-grab)
#extract generic correction factors for manta
manta.correction.proportion <- as.numeric(manta.correction$proportion[1] / 100)
manta.correction.upper95 <- manta.correction$proportion.upper95[1] / 100
manta.correction.lower95 <- manta.correction$proportion.lower95[1] / 100
manta.correction.sd <- manta.correction$sd.proportion[1] / 100
manta.correction.n <- manta.correction$n.proportion[1]

#join tables
sfBay2_joined <- left_join(sfBay2_recode, final_proportions, by = "locationMatrix") %>% 
  #replace manta with generic correction factor
  mutate(proportion = case_when(
    Sampling.apparatus == "Manta Trawl" ~ manta.correction.proportion,
    TRUE ~ as.numeric(as.character(proportion)))) %>% 
  mutate(proportion.upper95 = case_when(
    Sampling.apparatus == "Manta Trawl" ~ manta.correction.upper95)) %>% 
  mutate(proportion.lower95 = case_when(
    Sampling.apparatus == "Manta Trawl" ~ manta.correction.lower95)) %>% 
mutate(proportion.sd = case_when(
    Sampling.apparatus == "Manta Trawl" ~ manta.correction.sd)) %>% 
  mutate(proportion.n = case_when(
    Sampling.apparatus == "Manta Trawl" ~ manta.correction.n))

sfBay2_joined 
##                                              sampleID
## 1                                  17-POC-438-125&355
## 2                                  17-POC-259-125&355
## 3                       20180406MMPStormSBCCMP125&355
## 4                                  17-POC-283-125&355
## 5                                  17-POC-515-125&355
## 6                                  17-POC-100-125&355
## 7                                  17-POC-130-125&355
## 8                                    17GR-003-125&355
## 9                       20180108MMPStormSBSMMP125&355
## 10                      20180108MMPStormCBMeek125&355
## 11                     20180108MMPStormCBEmery125&355
## 12                                 19-POC-198-125&355
## 13                                   EBDA Aug 31 2017
## 14                                  EBDA Sept 26 2017
## 15                                  EBMUD Aug 22 2017
## 16                                 EBMUD Sept 26 2017
## 17                                      PA Aug 1 2017
## 18                                  PA July 20 2017 A
## 19                                     SJ Aug 10 2017
## 20                                    SJ Sept 19 2017
## 21                                  SUNN Sept 19 2017
## 22                                  CCCSD Sept 7 2017
## 23                                   FSSD Aug 23 2017
## 24                                   FSSD Sept 7 2017
## 25                                  EBMUD Oct 20 2017
## 26                                   SFPUC Nov 6 2017
## 27                                   SFPUC Nov 7 2017
## 28                                   SUNN Oct 17 2017
## 29                                   CCCSD Dec 6 2017
## 30                                         AN LSB06_1
## 31                                         AN LSB06_2
## 32                                         AN LSB06_4
## 33                                         TS LSB06_1
## 34                                         TS LSB06_2
## 35                                         TS LSB06_3
## 36                                         TS LSB06_4
## 37                                         AN LSB06_3
## 38                                         TS LSB06_5
## 39                                         TS LSB06_6
## 40                                         TS LSB06_7
## 41                                         TS LSB06_8
## 42                                         TS LSB06_9
## 43                                        TS LSB06_10
## 44                                         AN TB101_1
## 45                                         AN TB101_2
## 46                                         AN TB101_3
## 47                                         AN TB101_4
## 48                                         AN TB101_5
## 49                                         AN TB101_6
## 50                                         AN TB101_7
## 51                                         AN TB101_8
## 52                                         AN TB101_9
## 53                                        AN TB101_10
## 54                                         AN TB102_1
## 55                                         AN TB102_2
## 56                                         AN TB102_3
## 57                                         AN TB102_4
## 58                                         AN TB102_5
## 59                                         AN TB102_6
## 60                                         AN TB102_7
## 61                                         AN TB102_8
## 62                                         AN TB102_9
## 63                                        AN TB102_10
## 64                                         TS TB101_1
## 65                                         TS TB101_2
## 66                                         TS TB101_3
## 67                                         TS TB101_4
## 68                                         TS TB101_5
## 69                                         TS TB101_6
## 70                                         TS TB101_7
## 71                                         TS TB101_8
## 72                                         TS TB101_9
## 73                                        TS TB101_10
## 74                                         TS CB106_1
## 75                                         TS CB106_2
## 76                                         TS CB106_3
## 77                                         TS CB106_4
## 78                                         TS CB106_5
## 79                                         TS CB106_6
## 80                                         TS CB106_7
## 81                                         TS CB106_8
## 82                                         TS CB106_9
## 83                                        TS CB106_10
## 84                                         AN CB106_1
## 85                                         AN CB106_2
## 86                                         AN CB106_3
## 87                                         AN CB106_4
## 88                                         AN CB106_5
## 89                                         AN CB106_6
## 90                                         AN CB106_7
## 91                                         AN CB106_8
## 92                                         AN CB106_9
## 93                                        AN CB106_10
## 94                                         AN CB010_1
## 95                                         AN CB010_2
## 96                                         AN CB010_4
## 97                                         AN CB010_3
## 98                                         AN CB010_5
## 99                                         AN CB010_6
## 100                                        AN CB010_7
## 101                                        AN CB010_8
## 102                                        AN CB010_9
## 103                                       AN CB010_10
## 104                                        TS CB010_1
## 105                                        TS CB010_2
## 106                                        TS CB010_3
## 107                                        TS CB010_4
## 108                                        TS CB010_5
## 109                                        TS CB010_6
## 110                                        TS CB010_7
## 111                                        TS CB010_8
## 112                                       AN SOSL40_1
## 113                                       AN SOSL40_2
## 114                                       AN SOSL40_3
## 115                                       AN SOSL40_4
## 116                                       AN SOSL40_5
## 117                                       AN SOSL40_6
## 118                                       AN SOSL40_7
## 119                                       AN SOSL40_8
## 120                                       AN SOSL40_9
## 121                                      AN SOSL40_10
## 122                                        AN SB074_1
## 123                                        AN SB074_2
## 124                                        AN SB074_3
## 125                                        AN SB074_4
## 126                                        AN SB074_5
## 127                                        AN SB074_6
## 128                                        AN SB074_7
## 129                                        AN SB074_8
## 130                                        AN SB074_9
## 131                                       AN SB074_10
## 132                                        TS SB074_1
## 133                                        TS SB074_2
## 134                                        TS SB074_3
## 135                                        TS SB074_4
## 136                                        TS SB074_5
## 137                                        TS SB074_6
## 138                                        TS SB074_7
## 139                                        TS SB074_8
## 140                                        TS SB074_9
## 141                                       TS SB074_10
## 142                                        AN CB037_1
## 143                                        AN CB037_2
## 144                                        AN CB037_3
## 145                                        AN CB037_4
## 146                                        AN CB037_5
## 147                                        AN CB037_6
## 148                                        AN CB037_7
## 149                                        AN CB037_8
## 150                                        AN CB037_9
## 151                                       AN CB037_10
## 152                                        TS CB037_1
## 153                                        TS CB037_2
## 154                                        TS CB037_3
## 155                                        TS CB037_4
## 156                                        TS CB037_5
## 157                                        TS CB037_6
## 158                                        TS CB037_7
## 159                                        TS CB037_8
## 160                                        TS CB037_9
## 161                                       TS CB037_10
## 162                                       TS SOSL40_1
## 163                                       TS SOSL40_2
## 164                                       TS SOSL40_3
## 165                                       TS SOSL40_4
## 166                                       TS SOSL40_5
## 167                                       TS SOSL40_6
## 168                                       TS SOSL40_7
## 169                                       TS SOSL40_8
## 170                                       TS SOSL40_9
## 171                                      TS SOSL40_10
## 172                                        TS TB102_1
## 173                                        TS TB102_2
## 174                                        TS TB102_3
## 175                                        TS TB102_4
## 176                                        TS TB102_5
## 177                                        TS TB102_6
## 178                                        TS TB102_7
## 179                                        TS TB102_8
## 180                                        TS TB102_9
## 181                                       TS TB102_10
## 182                                     RMP_14SC_1153
## 183                               15RMPMC_CB10_MP1
## 184                                  15RMPMC-CB15-MP1
## 185                                  15RMPMC_CB32_MP1
## 186                                15RMPC_CB37_MP1
## 187                                17MMP_S_LSB02_MP_1
## 188                                17MMP_S_LSB04_MP_1
## 189                                  17MMP-S-LSB06-MP
## 190                                  15RMP_14SC_1270 
## 191                                17MMP_S_SB051_MP_1
## 192                                  17MMP_SB056_MP_1
## 193                                17MMP_S_SB074_MP_1
## 194                               17MMP_S_SOSL16_MP_1
## 195                                17MMP_S_SOSL40_MP1
## 196                                 17MMP-S-SPB128-MP
## 197                                 17MMP_S_SPB15_MP1
## 198                                  17MMP-S-SUB52-MP
## 199                                  17MMP_S_SUB53_MP
## 200                                  17MMP_S_TB101_MP
## 201                                  17MMP_S_TB102_MP
## 202                                        CB4 Aug 21
## 203                           CB4 Richmond Bdg Nov 16
## 204                                        CB5 Aug 22
## 205                                        CB5 Nov 16
## 206                                         CB5 Nov 5
## 207                                        CB6 Aug 22
## 208                                        CB6 Nov 16
## 209                                    CB7 Aug 22 DUP
## 210                             CB7 Bay Bridge Nov 16
## 211                                        CB8 Aug 25
## 212                                        CB8 Jan 11
## 213                                        CB9 Aug 22
## 214                                  CB9 Jan 11 Total
## 215                                    CBNMS22 Mar 30
## 216                                   CBNMS22 Sept 12
## 217                                    CBNMS23 Mar 29
## 218                                   CBNMS23 Sept 12
## 219                                   CBNMS24 Sept 13
## 220                                    GFNMS24 Mar 29
## 221                                    GFNMS25 Mar 30
## 222                                   GFNMS25 Sept 11
## 223                                    GFNMS26 Mar 29
## 224                                   GFNMS26 Sept 12
## 225                                  GFNMS27 March 29
## 226                                   GFNMS27 Sept 13
## 227                                    GFNMS28 Mar 30
## 228                               GFNMS28 DUP Sept 13
## 229                                      LSB14 Aug 24
## 230                                       LSB14 Mar 6
## 231                                      LSB15 Aug 24
## 232                                       LSB15 Mar 6
## 233                                      LSB16 Aug 24
## 234                                       LSB16 Mar 6
## 235                               MBNMS29 Jan 11 2018
## 236                                    MBNMS29 Mar 30
## 237                               MBNMS29 Nov 17 2017
## 238                                   MBNMS29 Sept 13
## 239                                    MBNMS30 Mar 31
## 240                                   MBNMS30 Sept 27
## 241                                    MBNMS31 Mar 31
## 242                                   MBNMS31 Sept 27
## 243                                    MBNMS32 Mar 31
## 244                                   MBNMS32 Sept 27
## 245                                       SB10 Aug 23
## 246                                       SB10 Mar 19
## 247                                       SB11 Aug 23
## 248                                       SB11 Mar 19
## 249                                       SB12 Aug 23
## 250                                       SB12 Mar 19
## 251                                       SB13 Aug 23
## 252                                       SB13 Mar 19
## 253                    SF Bay Treasure Island Sept 18
## 254                    SF Bay Treasure Island Sept 18
## 255                                  SPB2 Aug 21 2017
## 256                                  SPB2 Aug 21 2017
## 257                                       SPB2 Nov 16
## 258                                       SPB2 Nov 16
## 259                                       SPB3 Aug 21
## 260                                       SPB3 Aug 21
## 261                                       SPB3 Nov 17
## 262                                       SPB3 Nov 17
## 263                                       SUB1 Aug 21
## 264                                       SUB1 Aug 21
## 265                                       SUB1 Nov 17
## 266                                       SUB1 Nov 17
## 267                                   CB4 Aug 21 grab
## 268                                   CB4 Nov 22 grab
## 269                                   CB5 Aug 22 grab
## 270                                   CB5 Nov 22 grab
## 271                                   CB6 Aug 22 grab
## 272                                   CB6 Nov 22 grab
## 273                                   CB7 Aug 22 grab
## 274                                   CB7 Nov 22 grab
## 275                                   CB8 Aug 22 grab
## 276                                   CB8 Jan 11 grab
## 277                                   CB9 Aug 22 grab
## 278                                   CB9 Jan 22 grab
## 279                              CBNMS22 Sept 12 grab
## 280                               CBNMS23 Sep 22 grab
## 281                               CBNMS24 Sep 22 grab
## 282                         GFNMS/MBNMS29 Jan 22 grab
## 283                               GFNMS25 Mar 22 grab
## 284                              GFNMS25 Sept 11 grab
## 285                              GFNMS26 Sept 12 grab
## 286                               GFNMS27 Sep 22 grab
## 287               GFNMS28 (DUP for Manta) Sep 22 grab
## 288                                 LSB14 Mar 22 grab
## 289 LSB15 (corrected from LSB14 to LSB15) Mar 22 grab
## 290                                 LSB16 Aug 22 grab
## 291                                 LSB16 Mar 22 grab
## 292           MBNMS26 (GFNMS26 on bottle) Mar 22 grab
## 293                    MBNMS28 (GFNMS28?) Mar 22 grab
## 294                               MBNMS29 Mar 30 grab
## 295                               MBNMS29 Nov 22 grab
## 296                              MBNMS29 Sept 13 grab
## 297            MBNMS30 Mar 30 (Mar 31 for Manta) grab
## 298                               MBNMS30 Sep 22 grab
## 299                               MBNMS31 Mar 22 grab
## 300                               MBNMS31 Sep 22 grab
## 301                               MBNMS32 Mar 22 grab
## 302                               MBNMS32 Sep 22 grab
## 303                                  SB10 Aug 22 grab
## 304                                  SB10 Mar 22 grab
## 305                                  SB11 Aug 22 grab
## 306                                  SB11 Mar 22 grab
## 307                                  SB12 Mar 19 grab
## 308                                  SB13 Aug 23 grab
## 309                                  SB13 Mar 22 grab
## 310                             SPB2 Aug 21 2017 grab
## 311                                  SPB2 Nov 16 grab
## 312                                  SPB3 Aug 22 grab
## 313                                  SPB3 Nov 22 grab
## 314                                  SUB1 Aug 22 grab
## 315                                  SUB1 Nov 22 grab
##                            specific.location  System          general.location
## 1   Rodeo Creek at Seacliff Ct Pedestrian Br Estuary                      <NA>
## 2               Refugio Creek at Tsushima St Estuary                      <NA>
## 3                               Coyote Creek Estuary                      <NA>
## 4                 Colma Ck at S. Linden Blvd Estuary                      <NA>
## 5              Line 12K at Coliseum Entrance Estuary                      <NA>
## 6                Line 12F below PG&E station Estuary                      <NA>
## 7                   Line 12J at mouth to 12K Estuary                      <NA>
## 8             Guadalupe River at Highway 101 Estuary                      <NA>
## 9                            San Mateo Creek Estuary                      <NA>
## 10             Meeker Slough at Regatta Blvd Estuary                      <NA>
## 11                        MMP-Storm-CB-Emery Estuary                      <NA>
## 12                                  12M Rep1 Estuary                      <NA>
## 13                                      <NA> Estuary                      <NA>
## 14                                      <NA> Estuary                      <NA>
## 15                                      <NA> Estuary                      <NA>
## 16                                      <NA> Estuary                      <NA>
## 17                                      <NA> Estuary                      <NA>
## 18                                      <NA> Estuary                      <NA>
## 19                                      <NA> Estuary                      <NA>
## 20                                      <NA> Estuary                      <NA>
## 21                                      <NA> Estuary                      <NA>
## 22                                      <NA> Estuary                      <NA>
## 23                                      <NA> Estuary                      <NA>
## 24                                      <NA> Estuary                      <NA>
## 25                                      <NA> Estuary                      <NA>
## 26                                      <NA> Estuary                      <NA>
## 27                                      <NA> Estuary                      <NA>
## 28                                      <NA> Estuary                      <NA>
## 29                                      <NA> Estuary                      <NA>
## 30                                      <NA> Estuary           Lower South Bay
## 31                                      <NA> Estuary           Lower South Bay
## 32                                      <NA> Estuary           Lower South Bay
## 33                                      <NA> Estuary           Lower South Bay
## 34                                      <NA> Estuary           Lower South Bay
## 35                                      <NA> Estuary           Lower South Bay
## 36                                      <NA> Estuary           Lower South Bay
## 37                                      <NA> Estuary           Lower South Bay
## 38                                      <NA> Estuary           Lower South Bay
## 39                                      <NA> Estuary           Lower South Bay
## 40                                      <NA> Estuary           Lower South Bay
## 41                                      <NA> Estuary           Lower South Bay
## 42                                      <NA> Estuary           Lower South Bay
## 43                                      <NA> Estuary           Lower South Bay
## 44                                      <NA> Estuary               Tomales Bay
## 45                                      <NA> Estuary               Tomales Bay
## 46                                      <NA> Estuary               Tomales Bay
## 47                                      <NA> Estuary               Tomales Bay
## 48                                      <NA> Estuary               Tomales Bay
## 49                                      <NA> Estuary               Tomales Bay
## 50                                      <NA> Estuary               Tomales Bay
## 51                                      <NA> Estuary               Tomales Bay
## 52                                      <NA> Estuary               Tomales Bay
## 53                                      <NA> Estuary               Tomales Bay
## 54                                      <NA> Estuary               Tomales Bay
## 55                                      <NA> Estuary               Tomales Bay
## 56                                      <NA> Estuary               Tomales Bay
## 57                                      <NA> Estuary               Tomales Bay
## 58                                      <NA> Estuary               Tomales Bay
## 59                                      <NA> Estuary               Tomales Bay
## 60                                      <NA> Estuary               Tomales Bay
## 61                                      <NA> Estuary               Tomales Bay
## 62                                      <NA> Estuary               Tomales Bay
## 63                                      <NA> Estuary               Tomales Bay
## 64                                      <NA> Estuary               Tomales Bay
## 65                                      <NA> Estuary               Tomales Bay
## 66                                      <NA> Estuary               Tomales Bay
## 67                                      <NA> Estuary               Tomales Bay
## 68                                      <NA> Estuary               Tomales Bay
## 69                                      <NA> Estuary               Tomales Bay
## 70                                      <NA> Estuary               Tomales Bay
## 71                                      <NA> Estuary               Tomales Bay
## 72                                      <NA> Estuary               Tomales Bay
## 73                                      <NA> Estuary               Tomales Bay
## 74                                      <NA> Estuary               Central Bay
## 75                                      <NA> Estuary               Central Bay
## 76                                      <NA> Estuary               Central Bay
## 77                                      <NA> Estuary               Central Bay
## 78                                      <NA> Estuary               Central Bay
## 79                                      <NA> Estuary               Central Bay
## 80                                      <NA> Estuary               Central Bay
## 81                                      <NA> Estuary               Central Bay
## 82                                      <NA> Estuary               Central Bay
## 83                                      <NA> Estuary               Central Bay
## 84                                      <NA> Estuary               Central Bay
## 85                                      <NA> Estuary               Central Bay
## 86                                      <NA> Estuary               Central Bay
## 87                                      <NA> Estuary               Central Bay
## 88                                      <NA> Estuary               Central Bay
## 89                                      <NA> Estuary               Central Bay
## 90                                      <NA> Estuary               Central Bay
## 91                                      <NA> Estuary               Central Bay
## 92                                      <NA> Estuary               Central Bay
## 93                                      <NA> Estuary               Central Bay
## 94                                      <NA> Estuary               Central Bay
## 95                                      <NA> Estuary               Central Bay
## 96                                      <NA> Estuary               Central Bay
## 97                                      <NA> Estuary               Central Bay
## 98                                      <NA> Estuary               Central Bay
## 99                                      <NA> Estuary               Central Bay
## 100                                     <NA> Estuary               Central Bay
## 101                                     <NA> Estuary               Central Bay
## 102                                     <NA> Estuary               Central Bay
## 103                                     <NA> Estuary               Central Bay
## 104                                     <NA> Estuary               Central Bay
## 105                                     <NA> Estuary               Central Bay
## 106                                     <NA> Estuary               Central Bay
## 107                                     <NA> Estuary               Central Bay
## 108                                     <NA> Estuary               Central Bay
## 109                                     <NA> Estuary               Central Bay
## 110                                     <NA> Estuary               Central Bay
## 111                                     <NA> Estuary               Central Bay
## 112                                     <NA> Estuary                      <NA>
## 113                                     <NA> Estuary                      <NA>
## 114                                     <NA> Estuary                      <NA>
## 115                                     <NA> Estuary                      <NA>
## 116                                     <NA> Estuary                      <NA>
## 117                                     <NA> Estuary                      <NA>
## 118                                     <NA> Estuary                      <NA>
## 119                                     <NA> Estuary                      <NA>
## 120                                     <NA> Estuary                      <NA>
## 121                                     <NA> Estuary                      <NA>
## 122                                     <NA> Estuary                 South Bay
## 123                                     <NA> Estuary                 South Bay
## 124                                     <NA> Estuary                 South Bay
## 125                                     <NA> Estuary                 South Bay
## 126                                     <NA> Estuary                 South Bay
## 127                                     <NA> Estuary                 South Bay
## 128                                     <NA> Estuary                 South Bay
## 129                                     <NA> Estuary                 South Bay
## 130                                     <NA> Estuary                 South Bay
## 131                                     <NA> Estuary                 South Bay
## 132                                     <NA> Estuary                 South Bay
## 133                                     <NA> Estuary                 South Bay
## 134                                     <NA> Estuary                 South Bay
## 135                                     <NA> Estuary                 South Bay
## 136                                     <NA> Estuary                 South Bay
## 137                                     <NA> Estuary                 South Bay
## 138                                     <NA> Estuary                 South Bay
## 139                                     <NA> Estuary                 South Bay
## 140                                     <NA> Estuary                 South Bay
## 141                                     <NA> Estuary                 South Bay
## 142                                     <NA> Estuary               Central Bay
## 143                                     <NA> Estuary               Central Bay
## 144                                     <NA> Estuary               Central Bay
## 145                                     <NA> Estuary               Central Bay
## 146                                     <NA> Estuary               Central Bay
## 147                                     <NA> Estuary               Central Bay
## 148                                     <NA> Estuary               Central Bay
## 149                                     <NA> Estuary               Central Bay
## 150                                     <NA> Estuary               Central Bay
## 151                                     <NA> Estuary               Central Bay
## 152                                     <NA> Estuary               Central Bay
## 153                                     <NA> Estuary               Central Bay
## 154                                     <NA> Estuary               Central Bay
## 155                                     <NA> Estuary               Central Bay
## 156                                     <NA> Estuary               Central Bay
## 157                                     <NA> Estuary               Central Bay
## 158                                     <NA> Estuary               Central Bay
## 159                                     <NA> Estuary               Central Bay
## 160                                     <NA> Estuary               Central Bay
## 161                                     <NA> Estuary               Central Bay
## 162                                     <NA> Estuary                      SOSL
## 163                                     <NA> Estuary                      SOSL
## 164                                     <NA> Estuary                      SOSL
## 165                                     <NA> Estuary                      SOSL
## 166                                     <NA> Estuary                      SOSL
## 167                                     <NA> Estuary                      SOSL
## 168                                     <NA> Estuary                      SOSL
## 169                                     <NA> Estuary                      SOSL
## 170                                     <NA> Estuary                      SOSL
## 171                                     <NA> Estuary                      SOSL
## 172                                     <NA> Estuary               Tomales Bay
## 173                                     <NA> Estuary               Tomales Bay
## 174                                     <NA> Estuary               Tomales Bay
## 175                                     <NA> Estuary               Tomales Bay
## 176                                     <NA> Estuary               Tomales Bay
## 177                                     <NA> Estuary               Tomales Bay
## 178                                     <NA> Estuary               Tomales Bay
## 179                                     <NA> Estuary               Tomales Bay
## 180                                     <NA> Estuary               Tomales Bay
## 181                                     <NA> Estuary               Tomales Bay
## 182                                     <NA> Estuary                        SC
## 183                                     <NA> Estuary               Central Bay
## 184                                     <NA> Estuary               Central Bay
## 185                                     <NA> Estuary               Central Bay
## 186                                     <NA> Estuary               Central Bay
## 187                                     <NA> Estuary           Lower South Bay
## 188                                     <NA> Estuary           Lower South Bay
## 189                                     <NA> Estuary           Lower South Bay
## 190                                     <NA> Estuary                        SC
## 191                                     <NA> Estuary                 South Bay
## 192                                     <NA> Estuary                 South Bay
## 193                                     <NA> Estuary                 South Bay
## 194                                     <NA> Estuary                      SOSL
## 195                                     <NA> Estuary                      SOSL
## 196                                     <NA> Estuary                       SPB
## 197                                     <NA> Estuary                       SPB
## 198                                     <NA> Estuary                       SUB
## 199                                     <NA> Estuary                       SUB
## 200                                     <NA> Estuary               Tomales Bay
## 201                                     <NA> Estuary               Tomales Bay
## 202                                     <NA> Estuary               Central Bay
## 203                                     <NA> Estuary               Central Bay
## 204                                     <NA> Estuary               Central Bay
## 205                                     <NA> Estuary               Central Bay
## 206                                     <NA> Estuary               Central Bay
## 207                                     <NA> Estuary               Central Bay
## 208                                     <NA> Estuary               Central Bay
## 209                                     <NA> Estuary               Central Bay
## 210                                     <NA> Estuary               Central Bay
## 211                                     <NA> Estuary               Central Bay
## 212                                     <NA> Estuary               Central Bay
## 213                                     <NA> Estuary               Central Bay
## 214                                     <NA> Estuary               Central Bay
## 215                                     <NA> Estuary National Marine Sancturay
## 216                                     <NA> Estuary National Marine Sancturay
## 217                                     <NA> Estuary National Marine Sancturay
## 218                                     <NA> Estuary National Marine Sancturay
## 219                                     <NA> Estuary National Marine Sancturay
## 220                                     <NA> Estuary National Marine Sancturay
## 221                                     <NA> Estuary National Marine Sancturay
## 222                                     <NA> Estuary National Marine Sancturay
## 223                                     <NA> Estuary National Marine Sancturay
## 224                                     <NA> Estuary National Marine Sancturay
## 225                                     <NA> Estuary National Marine Sancturay
## 226                                     <NA> Estuary National Marine Sancturay
## 227                                     <NA> Estuary National Marine Sancturay
## 228                                     <NA> Estuary National Marine Sancturay
## 229                                     <NA> Estuary           Lower South Bay
## 230                                     <NA> Estuary           Lower South Bay
## 231                                     <NA> Estuary           Lower South Bay
## 232                                     <NA> Estuary           Lower South Bay
## 233                                     <NA> Estuary           Lower South Bay
## 234                                     <NA> Estuary           Lower South Bay
## 235                                     <NA> Estuary National Marine Sancturay
## 236                                     <NA> Estuary National Marine Sancturay
## 237                                     <NA> Estuary National Marine Sancturay
## 238                                     <NA> Estuary National Marine Sancturay
## 239                                     <NA> Estuary National Marine Sancturay
## 240                                     <NA> Estuary National Marine Sancturay
## 241                                     <NA> Estuary National Marine Sancturay
## 242                                     <NA> Estuary National Marine Sancturay
## 243                                     <NA> Estuary National Marine Sancturay
## 244                                     <NA> Estuary National Marine Sancturay
## 245                                     <NA> Estuary                 South Bay
## 246                                     <NA> Estuary                 South Bay
## 247                                     <NA> Estuary                 South Bay
## 248                                     <NA> Estuary                 South Bay
## 249                                     <NA> Estuary                 South Bay
## 250                                     <NA> Estuary                 South Bay
## 251                                     <NA> Estuary                 South Bay
## 252                                     <NA> Estuary                 South Bay
## 253                                     <NA> Estuary           Treasure Island
## 254                                     <NA> Estuary           Treasure Island
## 255                                     <NA> Estuary                       SPB
## 256                                     <NA> Estuary                       SPB
## 257                                     <NA> Estuary                       SPB
## 258                                     <NA> Estuary                       SPB
## 259                                     <NA> Estuary                       SPB
## 260                                     <NA> Estuary                       SPB
## 261                                     <NA> Estuary                       SPB
## 262                                     <NA> Estuary                       SPB
## 263                                     <NA> Estuary                       SUB
## 264                                     <NA> Estuary                       SUB
## 265                                     <NA> Estuary                       SUB
## 266                                     <NA> Estuary                       SUB
## 267                                     <NA> Estuary               Central Bay
## 268                                     <NA> Estuary               Central Bay
## 269                                     <NA> Estuary               Central Bay
## 270                                     <NA> Estuary               Central Bay
## 271                                     <NA> Estuary               Central Bay
## 272                                     <NA> Estuary               Central Bay
## 273                                     <NA> Estuary               Central Bay
## 274                                     <NA> Estuary               Central Bay
## 275                                     <NA> Estuary               Central Bay
## 276                                     <NA> Estuary               Central Bay
## 277                                     <NA> Estuary               Central Bay
## 278                                     <NA> Estuary               Central Bay
## 279                                     <NA> Estuary National Marine Sancturay
## 280                                     <NA> Estuary National Marine Sancturay
## 281                                     <NA> Estuary National Marine Sancturay
## 282                                     <NA> Estuary National Marine Sancturay
## 283                                     <NA> Estuary National Marine Sancturay
## 284                                     <NA> Estuary National Marine Sancturay
## 285                                     <NA> Estuary National Marine Sancturay
## 286                                     <NA> Estuary National Marine Sancturay
## 287                                     <NA> Estuary National Marine Sancturay
## 288                                     <NA> Estuary           Lower South Bay
## 289                                     <NA> Estuary           Lower South Bay
## 290                                     <NA> Estuary           Lower South Bay
## 291                                     <NA> Estuary           Lower South Bay
## 292                                     <NA> Estuary National Marine Sancturay
## 293                                     <NA> Estuary National Marine Sancturay
## 294                                     <NA> Estuary National Marine Sancturay
## 295                                     <NA> Estuary National Marine Sancturay
## 296                                     <NA> Estuary National Marine Sancturay
## 297                                     <NA> Estuary National Marine Sancturay
## 298                                     <NA> Estuary National Marine Sancturay
## 299                                     <NA> Estuary National Marine Sancturay
## 300                                     <NA> Estuary National Marine Sancturay
## 301                                     <NA> Estuary National Marine Sancturay
## 302                                     <NA> Estuary National Marine Sancturay
## 303                                     <NA> Estuary                 South Bay
## 304                                     <NA> Estuary                 South Bay
## 305                                     <NA> Estuary                 South Bay
## 306                                     <NA> Estuary                 South Bay
## 307                                     <NA> Estuary                 South Bay
## 308                                     <NA> Estuary                 South Bay
## 309                                     <NA> Estuary                 South Bay
## 310                                     <NA> Estuary                       SPB
## 311                                     <NA> Estuary                       SPB
## 312                                     <NA> Estuary                       SPB
## 313                                     <NA> Estuary                       SPB
## 314                                     <NA> Estuary                       SUB
## 315                                     <NA> Estuary                       SUB
##      latitude   longitude particles.L.blank.corrected
## 1      38.016    -122.254                   1.6300000
## 2      38.018    -122.277                   1.6500000
## 3   37.385832 -121.909581                   7.2000000
## 4       37.65    -122.412                   5.6300000
## 5      37.754    -122.204                   4.9400000
## 6      37.762    -122.214                   8.4300000
## 7      37.755    -122.201                  10.0600000
## 8    37.37356  -121.93283                   2.3100000
## 9   37.572638 -122.310769                   1.0900000
## 10  37.917861  -122.33838                  17.8400000
## 11   37.83429  -122.29349                  12.3600000
## 12  37.746843 -122.200699                  24.4100000
## 13    37.6952   -122.1858                   0.0645000
## 14    37.6952   -122.1858                   0.0115000
## 15    37.8236   -122.2956                   0.1778000
## 16    37.8236   -122.2956                   0.0421000
## 17    37.4527   -122.1108                   0.0030000
## 18    37.4527   -122.1108                   0.0054000
## 19    37.4332   -121.9522                   0.0186000
## 20    37.4332   -121.9522                   0.0233000
## 21    37.4193   -122.0162                   0.0222000
## 22    37.9961   -122.0686                   0.0778000
## 23    38.2233   -122.0829                   0.0037000
## 24    38.2233   -122.0829                   0.0055000
## 25    37.8236   -122.2956                   0.1083000
## 26    37.7476   -122.3728                   0.1593000
## 27    37.7476   -122.3728                   0.1816000
## 28    37.4193   -122.0162                   0.0075000
## 29    37.9961   -122.0686                   0.0683000
## 30    37.4576   -122.0921                          NA
## 31    37.4576   -122.0921                          NA
## 32    37.4576   -122.0921                          NA
## 33    37.4576   -122.0921                          NA
## 34    37.4576   -122.0921                          NA
## 35    37.4576   -122.0921                          NA
## 36    37.4576   -122.0921                          NA
## 37    37.4576   -122.0921                          NA
## 38    37.4576   -122.0921                          NA
## 39    37.4576   -122.0921                          NA
## 40    37.4576   -122.0921                          NA
## 41    37.4576   -122.0921                          NA
## 42    37.4576   -122.0921                          NA
## 43    37.4576   -122.0921                          NA
## 44    38.2093   -122.9292                          NA
## 45    38.2093   -122.9292                          NA
## 46    38.2093   -122.9292                          NA
## 47    38.2093   -122.9292                          NA
## 48    38.2093   -122.9292                          NA
## 49    38.2093   -122.9292                          NA
## 50    38.2093   -122.9292                          NA
## 51    38.2093   -122.9292                          NA
## 52    38.2093   -122.9292                          NA
## 53    38.2093   -122.9292                          NA
## 54    38.0908   -122.8358                          NA
## 55    38.0908   -122.8358                          NA
## 56    38.0908   -122.8358                          NA
## 57    38.0908   -122.8358                          NA
## 58    38.0908   -122.8358                          NA
## 59    38.0908   -122.8358                          NA
## 60    38.0908   -122.8358                          NA
## 61    38.0908   -122.8358                          NA
## 62    38.0908   -122.8358                          NA
## 63    38.0908   -122.8358                          NA
## 64    38.2093   -122.9292                          NA
## 65    38.2093   -122.9292                          NA
## 66    38.2093   -122.9292                          NA
## 67    38.2093   -122.9292                          NA
## 68    38.2093   -122.9292                          NA
## 69    38.2093   -122.9292                          NA
## 70    38.2093   -122.9292                          NA
## 71    38.2093   -122.9292                          NA
## 72    38.2093   -122.9292                          NA
## 73    38.2093   -122.9292                          NA
## 74    37.7579   -122.3055                          NA
## 75    37.7579   -122.3055                          NA
## 76    37.7579   -122.3055                          NA
## 77    37.7579   -122.3055                          NA
## 78    37.7579   -122.3055                          NA
## 79    37.7579   -122.3055                          NA
## 80    37.7579   -122.3055                          NA
## 81    37.7579   -122.3055                          NA
## 82    37.7579   -122.3055                          NA
## 83    37.7579   -122.3055                          NA
## 84    37.7579   -122.3055                          NA
## 85    37.7579   -122.3055                          NA
## 86    37.7579   -122.3055                          NA
## 87    37.7579   -122.3055                          NA
## 88    37.7579   -122.3055                          NA
## 89    37.7579   -122.3055                          NA
## 90    37.7579   -122.3055                          NA
## 91    37.7579   -122.3055                          NA
## 92    37.7579   -122.3055                          NA
## 93    37.7579   -122.3055                          NA
## 94    37.9067   -122.3467                          NA
## 95    37.9067   -122.3467                          NA
## 96    37.9067   -122.3467                          NA
## 97    37.9067   -122.3467                          NA
## 98    37.9067   -122.3467                          NA
## 99    37.9067   -122.3467                          NA
## 100   37.9067   -122.3467                          NA
## 101   37.9067   -122.3467                          NA
## 102   37.9067   -122.3467                          NA
## 103   37.9067   -122.3467                          NA
## 104   37.9067   -122.3467                          NA
## 105   37.9067   -122.3467                          NA
## 106   37.9067   -122.3467                          NA
## 107   37.9067   -122.3467                          NA
## 108   37.9067   -122.3467                          NA
## 109   37.9067   -122.3467                          NA
## 110   37.9067   -122.3467                          NA
## 111   37.9067   -122.3467                          NA
## 112   37.4621   -122.0217                          NA
## 113   37.4621   -122.0217                          NA
## 114   37.4621   -122.0217                          NA
## 115   37.4621   -122.0217                          NA
## 116   37.4621   -122.0217                          NA
## 117   37.4621   -122.0217                          NA
## 118   37.4621   -122.0217                          NA
## 119   37.4621   -122.0217                          NA
## 120   37.4621   -122.0217                          NA
## 121   37.4621   -122.0217                          NA
## 122   37.5277    -122.184                          NA
## 123   37.5277    -122.184                          NA
## 124   37.5277    -122.184                          NA
## 125   37.5277    -122.184                          NA
## 126   37.5277    -122.184                          NA
## 127   37.5277    -122.184                          NA
## 128   37.5277    -122.184                          NA
## 129   37.5277    -122.184                          NA
## 130   37.5277    -122.184                          NA
## 131   37.5277    -122.184                          NA
## 132   37.5277    -122.184                          NA
## 133   37.5277    -122.184                          NA
## 134   37.5277    -122.184                          NA
## 135   37.5277    -122.184                          NA
## 136   37.5277    -122.184                          NA
## 137   37.5277    -122.184                          NA
## 138   37.5277    -122.184                          NA
## 139   37.5277    -122.184                          NA
## 140   37.5277    -122.184                          NA
## 141   37.5277    -122.184                          NA
## 142   37.6414   -122.3945                          NA
## 143   37.6414   -122.3945                          NA
## 144   37.6414   -122.3945                          NA
## 145   37.6414   -122.3945                          NA
## 146   37.6414   -122.3945                          NA
## 147   37.6414   -122.3945                          NA
## 148   37.6414   -122.3945                          NA
## 149   37.6414   -122.3945                          NA
## 150   37.6414   -122.3945                          NA
## 151   37.6414   -122.3945                          NA
## 152   37.6414   -122.3945                          NA
## 153   37.6414   -122.3945                          NA
## 154   37.6414   -122.3945                          NA
## 155   37.6414   -122.3945                          NA
## 156   37.6414   -122.3945                          NA
## 157   37.6414   -122.3945                          NA
## 158   37.6414   -122.3945                          NA
## 159   37.6414   -122.3945                          NA
## 160   37.6414   -122.3945                          NA
## 161   37.6414   -122.3945                          NA
## 162   37.4621   -122.0217                          NA
## 163   37.4621   -122.0217                          NA
## 164   37.4621   -122.0217                          NA
## 165   37.4621   -122.0217                          NA
## 166   37.4621   -122.0217                          NA
## 167   37.4621   -122.0217                          NA
## 168   37.4621   -122.0217                          NA
## 169   37.4621   -122.0217                          NA
## 170   37.4621   -122.0217                          NA
## 171   37.4621   -122.0217                          NA
## 172   38.0908   -122.8358                          NA
## 173   38.0908   -122.8358                          NA
## 174   38.0908   -122.8358                          NA
## 175   38.0908   -122.8358                          NA
## 176   38.0908   -122.8358                          NA
## 177   38.0908   -122.8358                          NA
## 178   38.0908   -122.8358                          NA
## 179   38.0908   -122.8358                          NA
## 180   38.0908   -122.8358                          NA
## 181   38.0908   -122.8358                          NA
## 182   37.8766   -122.3615                          NA
## 183   37.9067   -122.3467                          NA
## 184   37.8279   -122.3034                          NA
## 185   37.7566   -122.2204                          NA
## 186   37.6414   -122.3945                          NA
## 187   37.4628    -122.105                          NA
## 188   37.4864    -122.069                          NA
## 189   37.4576    -122.092                          NA
## 190   37.6104    -122.167                          NA
## 191   37.6018    -122.362                          NA
## 192   37.5605    -122.131                          NA
## 193   37.5277    -122.184                          NA
## 194   37.4576     -122.04                          NA
## 195   37.4621    -122.022                          NA
## 196   38.0157   -122.3002                          NA
## 197   38.1084   -122.4881                          NA
## 198   38.1362    -122.035                          NA
## 199   38.0441   -122.0969                          NA
## 200   38.2093   -122.9292                          NA
## 201   38.0908   -122.8358                          NA
## 202     37.92     -122.44                   0.0000230
## 203     37.92     -122.43                   0.0061140
## 204     37.84     -122.42                   0.0004390
## 205     37.85     -122.41                   0.0018880
## 206     37.85     -122.41                   0.0005110
## 207     37.83     -122.32                   0.0000830
## 208     37.83     -122.32                   0.0004640
## 209       N/A         N/A                   0.0007740
## 210     37.78     -122.35                   0.0007290
## 211     37.75     -122.23                   0.0022650
## 212     37.75     -122.23                   0.0043430
## 213     37.69     -122.29                   0.0001880
## 214     37.69      -122.3                   0.0555910
## 215      38.1     -123.11                   0.0000880
## 216     38.11     -123.11                   0.0001630
## 217     38.02     -123.33                   0.0001260
## 218     38.03     -123.31                   0.0001390
## 219     37.99      -123.5                   0.0000000
## 220       N/A         N/A                   0.0000230
## 221     37.97     -122.93                   0.0002180
## 222     37.97     -122.93                   0.0000200
## 223     37.82     -123.02                   0.0000790
## 224     37.82     -123.01                   0.0001390
## 225     37.75     -123.26                   0.0000780
## 226     37.73     -123.26                   0.0000050
## 227     37.81     -122.76                   0.0000960
## 228     37.81     -122.76                   0.0000560
## 229     37.47     -122.06                   0.0009820
## 230     37.48     -122.08                   0.0002660
## 231     37.46     -122.08                   0.0003570
## 232     37.47     -122.09                   0.0002480
## 233     37.46     -122.03                   0.0001530
## 234     37.45     -122.03                   0.0005160
## 235     37.81     -122.47                   0.0003960
## 236     37.79      -122.5                   0.0002940
## 237      37.8      -122.5                   0.0002730
## 238     37.81     -122.51                   0.0000190
## 239     37.67     -122.61                   0.0000380
## 240     37.67     -122.61                   0.0000680
## 241     37.51     -122.57                   0.0000540
## 242     37.51     -122.58                   0.0000380
## 243     37.44     -122.93                   0.0000680
## 244     37.45     -122.93                   0.0000240
## 245     37.65     -122.24                   0.0001120
## 246     37.65     -122.23                   0.0002360
## 247      37.6     -122.25                   0.0001810
## 248     37.59      -122.2                   0.0026050
## 249     37.59     -122.28                   0.0001280
## 250     37.58     -122.27                   0.0004880
## 251     37.57     -122.21                   0.0028990
## 252     37.56     -122.22                   0.0013840
## 253     37.82     -122.36                   0.0004260
## 254     37.82     -122.36                   0.0004260
## 255     38.05     -122.42                   0.0000590
## 256     38.05     -122.42                   0.0000590
## 257     38.06     -122.42                   0.0000920
## 258     38.06     -122.42                   0.0000920
## 259     38.64     -122.37                   0.0006370
## 260     38.64     -122.37                   0.0006370
## 261     38.02     -122.37                   0.0014090
## 262     38.02     -122.37                   0.0014090
## 263     38.11     -122.06                   0.0000810
## 264     38.11     -122.06                   0.0000810
## 265     38.11     -122.06                   0.0001310
## 266     38.11     -122.06                   0.0001310
## 267  37.9156   -122.4412                    3.4653465
## 268  37.9229   -122.4330                    2.7348777
## 269  37.8430   -122.4150                    7.4331021
## 270  37.8445   -122.4069                    0.6277464
## 271  37.8342   -122.3204                    1.9509595
## 272  37.8339   -122.3221                    4.9844237
## 273      N/A         N/A                    2.3251073
## 274  37.7795   -122.3537                    1.5827794
## 275  37.7514   -122.2260                    2.7035623
## 276  37.7505   -122.2278                    2.5510204
## 277  37.6872   -122.2909                    6.5789474
## 278  37.6936   -122.2991                   18.7110187
## 279  38.1068   -123.1138                    3.0000000
## 280  38.0346   -123.3131                    1.6404199
## 281  37.9853   -123.4973                    8.6715227
## 282  37.8128   -122.4723                    0.6523157
## 283  37.9670   -122.9272                    0.0000000
## 284  37.9695   -122.9270                    1.8115942
## 285  37.8213   -123.0068                    0.7095745
## 286  37.7327   -123.2630                    1.2626263
## 287  37.8058   -122.7561                    3.6647546
## 288  37.4801   -122.0781                    3.0984997
## 289  37.4654   -122.0912                    1.2795905
## 290  37.4528   -122.0331                    7.6190476
## 291  37.4645   -122.0271                    2.4122807
## 292  37.8208   -123.0177                   13.5732323
## 293  37.8064   -122.7583                    2.3832221
## 294  37.8053   -122.5082                    0.9433962
## 295  37.7985   -122.5049                   35.7031494
## 296  37.7935   -122.5030                    2.2525988
## 297  37.6726   -122.6108                    2.2022684
## 298  37.6718   -122.6110                    1.6056519
## 299  37.5070   -122.5804                    4.2694497
## 300      N/A         N/A                    3.5020694
## 301  37.4504   -122.9320                   18.7659033
## 302  37.4446   -122.9280                    6.2984496
## 303  37.6534   -122.2281                    0.9980040
## 304  37.6500   -122.2433                    6.1443932
## 305  37.5863   -122.2022                    3.3460803
## 306  37.5983   -122.2502                    1.5957447
## 307  37.5829   -122.2708                    2.6666667
## 308  37.5649   -122.2227                    4.3383948
## 309  37.5701   -122.2129                    9.9313832
## 310  38.0513   -122.4218                    3.3333333
## 311  38.0598   -122.4244                    2.8333333
## 312  38.6405   -122.3716                    5.0860720
## 313  38.0239   -122.3682                    5.2430887
## 314  38.1071   -122.0563                    2.7646130
## 315  38.1079   -122.0570                    4.4275775
##     particles.fish.blank.corrected particles.kg.blank.corrected sample.matrix
## 1                               NA                           NA         water
## 2                               NA                           NA         water
## 3                               NA                           NA         water
## 4                               NA                           NA         water
## 5                               NA                           NA         water
## 6                               NA                           NA         water
## 7                               NA                           NA         water
## 8                               NA                           NA         water
## 9                               NA                           NA         water
## 10                              NA                           NA         water
## 11                              NA                           NA         water
## 12                              NA                           NA         water
## 13                              NA                           NA         water
## 14                              NA                           NA         water
## 15                              NA                           NA         water
## 16                              NA                           NA         water
## 17                              NA                           NA         water
## 18                              NA                           NA         water
## 19                              NA                           NA         water
## 20                              NA                           NA         water
## 21                              NA                           NA         water
## 22                              NA                           NA         water
## 23                              NA                           NA         water
## 24                              NA                           NA         water
## 25                              NA                           NA         water
## 26                              NA                           NA         water
## 27                              NA                           NA         water
## 28                              NA                           NA         water
## 29                              NA                           NA         water
## 30                           24.27                           NA          fish
## 31                            6.60                           NA          fish
## 32                            0.87                           NA          fish
## 33                            1.00                           NA          fish
## 34                            0.93                           NA          fish
## 35                            3.53                           NA          fish
## 36                            2.40                           NA          fish
## 37                           45.07                           NA          fish
## 38                            8.00                           NA          fish
## 39                           11.67                           NA          fish
## 40                            5.73                           NA          fish
## 41                            5.87                           NA          fish
## 42                           14.47                           NA          fish
## 43                            1.80                           NA          fish
## 44                            0.00                           NA          fish
## 45                            0.00                           NA          fish
## 46                            1.73                           NA          fish
## 47                            0.13                           NA          fish
## 48                            1.80                           NA          fish
## 49                            1.00                           NA          fish
## 50                            5.47                           NA          fish
## 51                            3.87                           NA          fish
## 52                            7.40                           NA          fish
## 53                            6.00                           NA          fish
## 54                            5.47                           NA          fish
## 55                            3.60                           NA          fish
## 56                            0.00                           NA          fish
## 57                            2.00                           NA          fish
## 58                            2.67                           NA          fish
## 59                            1.60                           NA          fish
## 60                            1.13                           NA          fish
## 61                            1.60                           NA          fish
## 62                            1.60                           NA          fish
## 63                            0.87                           NA          fish
## 64                            6.33                           NA          fish
## 65                            0.13                           NA          fish
## 66                           15.40                           NA          fish
## 67                           11.27                           NA          fish
## 68                           11.40                           NA          fish
## 69                            3.27                           NA          fish
## 70                           11.33                           NA          fish
## 71                            1.87                           NA          fish
## 72                            2.40                           NA          fish
## 73                            1.00                           NA          fish
## 74                           11.13                           NA          fish
## 75                            9.07                           NA          fish
## 76                            3.93                           NA          fish
## 77                            8.87                           NA          fish
## 78                            9.40                           NA          fish
## 79                            3.40                           NA          fish
## 80                            9.00                           NA          fish
## 81                           16.40                           NA          fish
## 82                            6.60                           NA          fish
## 83                            1.80                           NA          fish
## 84                           17.53                           NA          fish
## 85                           17.27                           NA          fish
## 86                           11.07                           NA          fish
## 87                           24.00                           NA          fish
## 88                           20.33                           NA          fish
## 89                           14.53                           NA          fish
## 90                           17.73                           NA          fish
## 91                            9.53                           NA          fish
## 92                           13.47                           NA          fish
## 93                           14.60                           NA          fish
## 94                           35.13                           NA          fish
## 95                           20.40                           NA          fish
## 96                           28.13                           NA          fish
## 97                           13.13                           NA          fish
## 98                           13.13                           NA          fish
## 99                            5.73                           NA          fish
## 100                          14.40                           NA          fish
## 101                          15.07                           NA          fish
## 102                          21.93                           NA          fish
## 103                           7.40                           NA          fish
## 104                          21.60                           NA          fish
## 105                          35.40                           NA          fish
## 106                          22.53                           NA          fish
## 107                           6.67                           NA          fish
## 108                          12.33                           NA          fish
## 109                          18.87                           NA          fish
## 110                           8.40                           NA          fish
## 111                           3.40                           NA          fish
## 112                           9.00                           NA          fish
## 113                           0.73                           NA          fish
## 114                           2.47                           NA          fish
## 115                           7.27                           NA          fish
## 116                           2.40                           NA          fish
## 117                           1.67                           NA          fish
## 118                           2.73                           NA          fish
## 119                           5.40                           NA          fish
## 120                           0.73                           NA          fish
## 121                           1.67                           NA          fish
## 122                           3.60                           NA          fish
## 123                           1.73                           NA          fish
## 124                           1.00                           NA          fish
## 125                           1.67                           NA          fish
## 126                          12.87                           NA          fish
## 127                           4.53                           NA          fish
## 128                           3.40                           NA          fish
## 129                           3.73                           NA          fish
## 130                           1.87                           NA          fish
## 131                           4.73                           NA          fish
## 132                          10.13                           NA          fish
## 133                          27.13                           NA          fish
## 134                          31.20                           NA          fish
## 135                          35.13                           NA          fish
## 136                          27.00                           NA          fish
## 137                          24.00                           NA          fish
## 138                          56.13                           NA          fish
## 139                          16.27                           NA          fish
## 140                          21.13                           NA          fish
## 141                          28.13                           NA          fish
## 142                          22.27                           NA          fish
## 143                           9.27                           NA          fish
## 144                          24.07                           NA          fish
## 145                           7.40                           NA          fish
## 146                          12.27                           NA          fish
## 147                           7.13                           NA          fish
## 148                           7.53                           NA          fish
## 149                           7.87                           NA          fish
## 150                           2.13                           NA          fish
## 151                           1.93                           NA          fish
## 152                           7.87                           NA          fish
## 153                           1.53                           NA          fish
## 154                           2.80                           NA          fish
## 155                           8.40                           NA          fish
## 156                          12.40                           NA          fish
## 157                           3.87                           NA          fish
## 158                           8.87                           NA          fish
## 159                           6.47                           NA          fish
## 160                           4.53                           NA          fish
## 161                           2.87                           NA          fish
## 162                          32.93                           NA          fish
## 163                          15.60                           NA          fish
## 164                          44.13                           NA          fish
## 165                          17.47                           NA          fish
## 166                           4.00                           NA          fish
## 167                           6.53                           NA          fish
## 168                           8.80                           NA          fish
## 169                          10.27                           NA          fish
## 170                           7.80                           NA          fish
## 171                           0.80                           NA          fish
## 172                          20.47                           NA          fish
## 173                          13.33                           NA          fish
## 174                           4.27                           NA          fish
## 175                           2.60                           NA          fish
## 176                           6.40                           NA          fish
## 177                           6.47                           NA          fish
## 178                           1.00                           NA          fish
## 179                           3.73                           NA          fish
## 180                           2.27                           NA          fish
## 181                           5.60                           NA          fish
## 182                             NA                       425.56      sediment
## 183                             NA                      1140.55      sediment
## 184                             NA                      1610.94      sediment
## 185                             NA                     12095.68      sediment
## 186                             NA                      2730.69      sediment
## 187                             NA                     42104.17      sediment
## 188                             NA                      3647.26      sediment
## 189                             NA                      7108.70      sediment
## 190                             NA                      2893.81      sediment
## 191                             NA                       835.84      sediment
## 192                             NA                        26.67      sediment
## 193                             NA                       313.33      sediment
## 194                             NA                      9270.83      sediment
## 195                             NA                      7045.45      sediment
## 196                             NA                       567.78      sediment
## 197                             NA                      1028.07      sediment
## 198                             NA                       250.00      sediment
## 199                             NA                       131.02      sediment
## 200                             NA                       100.07      sediment
## 201                             NA                       216.38      sediment
## 202                             NA                           NA         water
## 203                             NA                           NA         water
## 204                             NA                           NA         water
## 205                             NA                           NA         water
## 206                             NA                           NA         water
## 207                             NA                           NA         water
## 208                             NA                           NA         water
## 209                             NA                           NA         water
## 210                             NA                           NA         water
## 211                             NA                           NA         water
## 212                             NA                           NA         water
## 213                             NA                           NA         water
## 214                             NA                           NA         water
## 215                             NA                           NA         water
## 216                             NA                           NA         water
## 217                             NA                           NA         water
## 218                             NA                           NA         water
## 219                             NA                           NA         water
## 220                             NA                           NA         water
## 221                             NA                           NA         water
## 222                             NA                           NA         water
## 223                             NA                           NA         water
## 224                             NA                           NA         water
## 225                             NA                           NA         water
## 226                             NA                           NA         water
## 227                             NA                           NA         water
## 228                             NA                           NA         water
## 229                             NA                           NA         water
## 230                             NA                           NA         water
## 231                             NA                           NA         water
## 232                             NA                           NA         water
## 233                             NA                           NA         water
## 234                             NA                           NA         water
## 235                             NA                           NA         water
## 236                             NA                           NA         water
## 237                             NA                           NA         water
## 238                             NA                           NA         water
## 239                             NA                           NA         water
## 240                             NA                           NA         water
## 241                             NA                           NA         water
## 242                             NA                           NA         water
## 243                             NA                           NA         water
## 244                             NA                           NA         water
## 245                             NA                           NA         water
## 246                             NA                           NA         water
## 247                             NA                           NA         water
## 248                             NA                           NA         water
## 249                             NA                           NA         water
## 250                             NA                           NA         water
## 251                             NA                           NA         water
## 252                             NA                           NA         water
## 253                             NA                           NA         water
## 254                             NA                           NA         water
## 255                             NA                           NA         water
## 256                             NA                           NA         water
## 257                             NA                           NA         water
## 258                             NA                           NA         water
## 259                             NA                           NA         water
## 260                             NA                           NA         water
## 261                             NA                           NA         water
## 262                             NA                           NA         water
## 263                             NA                           NA         water
## 264                             NA                           NA         water
## 265                             NA                           NA         water
## 266                             NA                           NA         water
## 267                             NA                           NA         water
## 268                             NA                           NA         water
## 269                             NA                           NA         water
## 270                             NA                           NA         water
## 271                             NA                           NA         water
## 272                             NA                           NA         water
## 273                             NA                           NA         water
## 274                             NA                           NA         water
## 275                             NA                           NA         water
## 276                             NA                           NA         water
## 277                             NA                           NA         water
## 278                             NA                           NA         water
## 279                             NA                           NA         water
## 280                             NA                           NA         water
## 281                             NA                           NA         water
## 282                             NA                           NA         water
## 283                             NA                           NA         water
## 284                             NA                           NA         water
## 285                             NA                           NA         water
## 286                             NA                           NA         water
## 287                             NA                           NA         water
## 288                             NA                           NA         water
## 289                             NA                           NA         water
## 290                             NA                           NA         water
## 291                             NA                           NA         water
## 292                             NA                           NA         water
## 293                             NA                           NA         water
## 294                             NA                           NA         water
## 295                             NA                           NA         water
## 296                             NA                           NA         water
## 297                             NA                           NA         water
## 298                             NA                           NA         water
## 299                             NA                           NA         water
## 300                             NA                           NA         water
## 301                             NA                           NA         water
## 302                             NA                           NA         water
## 303                             NA                           NA         water
## 304                             NA                           NA         water
## 305                             NA                           NA         water
## 306                             NA                           NA         water
## 307                             NA                           NA         water
## 308                             NA                           NA         water
## 309                             NA                           NA         water
## 310                             NA                           NA         water
## 311                             NA                           NA         water
## 312                             NA                           NA         water
## 313                             NA                           NA         water
## 314                             NA                           NA         water
## 315                             NA                           NA         water
##     sample.matrix.specific               Sampling.apparatus x1M  x2M
## 1               stormwater depth-integrated perisaltic pump 106 5000
## 2               stormwater depth-integrated perisaltic pump 106 5000
## 3               stormwater depth-integrated perisaltic pump 106 5000
## 4               stormwater depth-integrated perisaltic pump 106 5000
## 5               stormwater depth-integrated perisaltic pump 106 5000
## 6               stormwater depth-integrated perisaltic pump 106 5000
## 7               stormwater depth-integrated perisaltic pump 106 5000
## 8               stormwater depth-integrated perisaltic pump 106 5000
## 9               stormwater depth-integrated perisaltic pump 106 5000
## 10              stormwater depth-integrated perisaltic pump 106 5000
## 11              stormwater depth-integrated perisaltic pump 106 5000
## 12              stormwater depth-integrated perisaltic pump 106 5000
## 13              wastewater                        Composite 110 5000
## 14              wastewater                        Composite 110 5000
## 15              wastewater                        Composite 110 5000
## 16              wastewater                        Composite 110 5000
## 17              wastewater                        Composite 110 5000
## 18              wastewater                        Composite 110 5000
## 19              wastewater                        Composite 110 5000
## 20              wastewater                        Composite 110 5000
## 21              wastewater                        Composite 110 5000
## 22              wastewater                        Composite 110 5000
## 23              wastewater                        Composite 110 5000
## 24              wastewater                        Composite 110 5000
## 25              wastewater                        Composite 110 5000
## 26              wastewater                        Composite 110 5000
## 27              wastewater                        Composite 110 5000
## 28              wastewater                        Composite 110 5000
## 29              wastewater                        Composite 110 5000
## 30                 anchovy             otter trawl/cast net  25 5000
## 31                 anchovy             otter trawl/cast net  25 5000
## 32                 anchovy             otter trawl/cast net  25 5000
## 33                topsmelt             otter trawl/cast net  25 5000
## 34                topsmelt             otter trawl/cast net  25 5000
## 35                topsmelt             otter trawl/cast net  25 5000
## 36                topsmelt             otter trawl/cast net  25 5000
## 37                 anchovy             otter trawl/cast net  25 5000
## 38                topsmelt             otter trawl/cast net  25 5000
## 39                topsmelt             otter trawl/cast net  25 5000
## 40                topsmelt             otter trawl/cast net  25 5000
## 41                topsmelt             otter trawl/cast net  25 5000
## 42                topsmelt             otter trawl/cast net  25 5000
## 43                topsmelt             otter trawl/cast net  25 5000
## 44                 anchovy             otter trawl/cast net  25 5000
## 45                 anchovy             otter trawl/cast net  25 5000
## 46                 anchovy             otter trawl/cast net  25 5000
## 47                 anchovy             otter trawl/cast net  25 5000
## 48                 anchovy             otter trawl/cast net  25 5000
## 49                 anchovy             otter trawl/cast net  25 5000
## 50                 anchovy             otter trawl/cast net  25 5000
## 51                 anchovy             otter trawl/cast net  25 5000
## 52                 anchovy             otter trawl/cast net  25 5000
## 53                 anchovy             otter trawl/cast net  25 5000
## 54                 anchovy             otter trawl/cast net  25 5000
## 55                 anchovy             otter trawl/cast net  25 5000
## 56                 anchovy             otter trawl/cast net  25 5000
## 57                 anchovy             otter trawl/cast net  25 5000
## 58                 anchovy             otter trawl/cast net  25 5000
## 59                 anchovy             otter trawl/cast net  25 5000
## 60                 anchovy             otter trawl/cast net  25 5000
## 61                 anchovy             otter trawl/cast net  25 5000
## 62                 anchovy             otter trawl/cast net  25 5000
## 63                 anchovy             otter trawl/cast net  25 5000
## 64                topsmelt             otter trawl/cast net  25 5000
## 65                topsmelt             otter trawl/cast net  25 5000
## 66                topsmelt             otter trawl/cast net  25 5000
## 67                topsmelt             otter trawl/cast net  25 5000
## 68                topsmelt             otter trawl/cast net  25 5000
## 69                topsmelt             otter trawl/cast net  25 5000
## 70                topsmelt             otter trawl/cast net  25 5000
## 71                topsmelt             otter trawl/cast net  25 5000
## 72                topsmelt             otter trawl/cast net  25 5000
## 73                topsmelt             otter trawl/cast net  25 5000
## 74                topsmelt             otter trawl/cast net  25 5000
## 75                topsmelt             otter trawl/cast net  25 5000
## 76                topsmelt             otter trawl/cast net  25 5000
## 77                topsmelt             otter trawl/cast net  25 5000
## 78                topsmelt             otter trawl/cast net  25 5000
## 79                topsmelt             otter trawl/cast net  25 5000
## 80                topsmelt             otter trawl/cast net  25 5000
## 81                topsmelt             otter trawl/cast net  25 5000
## 82                topsmelt             otter trawl/cast net  25 5000
## 83                topsmelt             otter trawl/cast net  25 5000
## 84                 anchovy             otter trawl/cast net  25 5000
## 85                 anchovy             otter trawl/cast net  25 5000
## 86                 anchovy             otter trawl/cast net  25 5000
## 87                 anchovy             otter trawl/cast net  25 5000
## 88                 anchovy             otter trawl/cast net  25 5000
## 89                 anchovy             otter trawl/cast net  25 5000
## 90                 anchovy             otter trawl/cast net  25 5000
## 91                 anchovy             otter trawl/cast net  25 5000
## 92                 anchovy             otter trawl/cast net  25 5000
## 93                 anchovy             otter trawl/cast net  25 5000
## 94                 anchovy             otter trawl/cast net  25 5000
## 95                 anchovy             otter trawl/cast net  25 5000
## 96                 anchovy             otter trawl/cast net  25 5000
## 97                 anchovy             otter trawl/cast net  25 5000
## 98                 anchovy             otter trawl/cast net  25 5000
## 99                 anchovy             otter trawl/cast net  25 5000
## 100                anchovy             otter trawl/cast net  25 5000
## 101                anchovy             otter trawl/cast net  25 5000
## 102                anchovy             otter trawl/cast net  25 5000
## 103                anchovy             otter trawl/cast net  25 5000
## 104               topsmelt             otter trawl/cast net  25 5000
## 105               topsmelt             otter trawl/cast net  25 5000
## 106               topsmelt             otter trawl/cast net  25 5000
## 107               topsmelt             otter trawl/cast net  25 5000
## 108               topsmelt             otter trawl/cast net  25 5000
## 109               topsmelt             otter trawl/cast net  25 5000
## 110               topsmelt             otter trawl/cast net  25 5000
## 111               topsmelt             otter trawl/cast net  25 5000
## 112                anchovy             otter trawl/cast net  25 5000
## 113                anchovy             otter trawl/cast net  25 5000
## 114                anchovy             otter trawl/cast net  25 5000
## 115                anchovy             otter trawl/cast net  25 5000
## 116                anchovy             otter trawl/cast net  25 5000
## 117                anchovy             otter trawl/cast net  25 5000
## 118                anchovy             otter trawl/cast net  25 5000
## 119                anchovy             otter trawl/cast net  25 5000
## 120                anchovy             otter trawl/cast net  25 5000
## 121                anchovy             otter trawl/cast net  25 5000
## 122                anchovy             otter trawl/cast net  25 5000
## 123                anchovy             otter trawl/cast net  25 5000
## 124                anchovy             otter trawl/cast net  25 5000
## 125                anchovy             otter trawl/cast net  25 5000
## 126                anchovy             otter trawl/cast net  25 5000
## 127                anchovy             otter trawl/cast net  25 5000
## 128                anchovy             otter trawl/cast net  25 5000
## 129                anchovy             otter trawl/cast net  25 5000
## 130                anchovy             otter trawl/cast net  25 5000
## 131                anchovy             otter trawl/cast net  25 5000
## 132               topsmelt             otter trawl/cast net  25 5000
## 133               topsmelt             otter trawl/cast net  25 5000
## 134               topsmelt             otter trawl/cast net  25 5000
## 135               topsmelt             otter trawl/cast net  25 5000
## 136               topsmelt             otter trawl/cast net  25 5000
## 137               topsmelt             otter trawl/cast net  25 5000
## 138               topsmelt             otter trawl/cast net  25 5000
## 139               topsmelt             otter trawl/cast net  25 5000
## 140               topsmelt             otter trawl/cast net  25 5000
## 141               topsmelt             otter trawl/cast net  25 5000
## 142                anchovy             otter trawl/cast net  25 5000
## 143                anchovy             otter trawl/cast net  25 5000
## 144                anchovy             otter trawl/cast net  25 5000
## 145                anchovy             otter trawl/cast net  25 5000
## 146                anchovy             otter trawl/cast net  25 5000
## 147                anchovy             otter trawl/cast net  25 5000
## 148                anchovy             otter trawl/cast net  25 5000
## 149                anchovy             otter trawl/cast net  25 5000
## 150                anchovy             otter trawl/cast net  25 5000
## 151                anchovy             otter trawl/cast net  25 5000
## 152               topsmelt             otter trawl/cast net  25 5000
## 153               topsmelt             otter trawl/cast net  25 5000
## 154               topsmelt             otter trawl/cast net  25 5000
## 155               topsmelt             otter trawl/cast net  25 5000
## 156               topsmelt             otter trawl/cast net  25 5000
## 157               topsmelt             otter trawl/cast net  25 5000
## 158               topsmelt             otter trawl/cast net  25 5000
## 159               topsmelt             otter trawl/cast net  25 5000
## 160               topsmelt             otter trawl/cast net  25 5000
## 161               topsmelt             otter trawl/cast net  25 5000
## 162               topsmelt             otter trawl/cast net  25 5000
## 163               topsmelt             otter trawl/cast net  25 5000
## 164               topsmelt             otter trawl/cast net  25 5000
## 165               topsmelt             otter trawl/cast net  25 5000
## 166               topsmelt             otter trawl/cast net  25 5000
## 167               topsmelt             otter trawl/cast net  25 5000
## 168               topsmelt             otter trawl/cast net  25 5000
## 169               topsmelt             otter trawl/cast net  25 5000
## 170               topsmelt             otter trawl/cast net  25 5000
## 171               topsmelt             otter trawl/cast net  25 5000
## 172               topsmelt             otter trawl/cast net  25 5000
## 173               topsmelt             otter trawl/cast net  25 5000
## 174               topsmelt             otter trawl/cast net  25 5000
## 175               topsmelt             otter trawl/cast net  25 5000
## 176               topsmelt             otter trawl/cast net  25 5000
## 177               topsmelt             otter trawl/cast net  25 5000
## 178               topsmelt             otter trawl/cast net  25 5000
## 179               topsmelt             otter trawl/cast net  25 5000
## 180               topsmelt             otter trawl/cast net  25 5000
## 181               topsmelt             otter trawl/cast net  25 5000
## 182               sediment                    Van Veen Grab  45 5000
## 183               sediment                    Van Veen Grab  45 5000
## 184               sediment                    Van Veen Grab  45 5000
## 185               sediment                    Van Veen Grab  45 5000
## 186               sediment                    Van Veen Grab  45 5000
## 187               sediment                    Van Veen Grab  45 5000
## 188               sediment                    Van Veen Grab  45 5000
## 189               sediment                    Van Veen Grab  45 5000
## 190               sediment                    Van Veen Grab  45 5000
## 191               sediment                    Van Veen Grab  45 5000
## 192               sediment                    Van Veen Grab  45 5000
## 193               sediment                    Van Veen Grab  45 5000
## 194               sediment                    Van Veen Grab  45 5000
## 195               sediment                    Van Veen Grab  45 5000
## 196               sediment                    Van Veen Grab  45 5000
## 197               sediment                    Van Veen Grab  45 5000
## 198               sediment                    Van Veen Grab  45 5000
## 199               sediment                    Van Veen Grab  45 5000
## 200               sediment                    Van Veen Grab  45 5000
## 201               sediment                    Van Veen Grab  45 5000
## 202          surface water                      Manta Trawl 333 5000
## 203          surface water                      Manta Trawl 333 5000
## 204          surface water                      Manta Trawl 333 5000
## 205          surface water                      Manta Trawl 333 5000
## 206          surface water                      Manta Trawl 333 5000
## 207          surface water                      Manta Trawl 333 5000
## 208          surface water                      Manta Trawl 333 5000
## 209          surface water                      Manta Trawl 333 5000
## 210          surface water                      Manta Trawl 333 5000
## 211          surface water                      Manta Trawl 333 5000
## 212          surface water                      Manta Trawl 333 5000
## 213          surface water                      Manta Trawl 333 5000
## 214          surface water                      Manta Trawl 333 5000
## 215          surface water                      Manta Trawl 333 5000
## 216          surface water                      Manta Trawl 333 5000
## 217          surface water                      Manta Trawl 333 5000
## 218          surface water                      Manta Trawl 333 5000
## 219          surface water                      Manta Trawl 333 5000
## 220          surface water                      Manta Trawl 333 5000
## 221          surface water                      Manta Trawl 333 5000
## 222          surface water                      Manta Trawl 333 5000
## 223          surface water                      Manta Trawl 333 5000
## 224          surface water                      Manta Trawl 333 5000
## 225          surface water                      Manta Trawl 333 5000
## 226          surface water                      Manta Trawl 333 5000
## 227          surface water                      Manta Trawl 333 5000
## 228          surface water                      Manta Trawl 333 5000
## 229          surface water                      Manta Trawl 333 5000
## 230          surface water                      Manta Trawl 333 5000
## 231          surface water                      Manta Trawl 333 5000
## 232          surface water                      Manta Trawl 333 5000
## 233          surface water                      Manta Trawl 333 5000
## 234          surface water                      Manta Trawl 333 5000
## 235          surface water                      Manta Trawl 333 5000
## 236          surface water                      Manta Trawl 333 5000
## 237          surface water                      Manta Trawl 333 5000
## 238          surface water                      Manta Trawl 333 5000
## 239          surface water                      Manta Trawl 333 5000
## 240          surface water                      Manta Trawl 333 5000
## 241          surface water                      Manta Trawl 333 5000
## 242          surface water                      Manta Trawl 333 5000
## 243          surface water                      Manta Trawl 333 5000
## 244          surface water                      Manta Trawl 333 5000
## 245          surface water                      Manta Trawl 333 5000
## 246          surface water                      Manta Trawl 333 5000
## 247          surface water                      Manta Trawl 333 5000
## 248          surface water                      Manta Trawl 333 5000
## 249          surface water                      Manta Trawl 333 5000
## 250          surface water                      Manta Trawl 333 5000
## 251          surface water                      Manta Trawl 333 5000
## 252          surface water                      Manta Trawl 333 5000
## 253          surface water                      Manta Trawl 333 5000
## 254          surface water                      Manta Trawl 333 5000
## 255          surface water                      Manta Trawl 333 5000
## 256          surface water                      Manta Trawl 333 5000
## 257          surface water                      Manta Trawl 333 5000
## 258          surface water                      Manta Trawl 333 5000
## 259          surface water                      Manta Trawl 333 5000
## 260          surface water                      Manta Trawl 333 5000
## 261          surface water                      Manta Trawl 333 5000
## 262          surface water                      Manta Trawl 333 5000
## 263          surface water                      Manta Trawl 333 5000
## 264          surface water                      Manta Trawl 333 5000
## 265          surface water                      Manta Trawl 333 5000
## 266          surface water                      Manta Trawl 333 5000
## 267          surface water                         1-L grab  50 5000
## 268          surface water                         1-L grab  50 5000
## 269          surface water                         1-L grab  50 5000
## 270          surface water                         1-L grab  50 5000
## 271          surface water                         1-L grab  50 5000
## 272          surface water                         1-L grab  50 5000
## 273          surface water                         1-L grab  50 5000
## 274          surface water                         1-L grab  50 5000
## 275          surface water                         1-L grab  50 5000
## 276          surface water                         1-L grab  50 5000
## 277          surface water                         1-L grab  50 5000
## 278          surface water                         1-L grab  50 5000
## 279          surface water                         1-L grab  50 5000
## 280          surface water                         1-L grab  50 5000
## 281          surface water                         1-L grab  50 5000
## 282          surface water                         1-L grab  50 5000
## 283          surface water                         1-L grab  50 5000
## 284          surface water                         1-L grab  50 5000
## 285          surface water                         1-L grab  50 5000
## 286          surface water                         1-L grab  50 5000
## 287          surface water                         1-L grab  50 5000
## 288          surface water                         1-L grab  50 5000
## 289          surface water                         1-L grab  50 5000
## 290          surface water                         1-L grab  50 5000
## 291          surface water                         1-L grab  50 5000
## 292          surface water                         1-L grab  50 5000
## 293          surface water                         1-L grab  50 5000
## 294          surface water                         1-L grab  50 5000
## 295          surface water                         1-L grab  50 5000
## 296          surface water                         1-L grab  50 5000
## 297          surface water                         1-L grab  50 5000
## 298          surface water                         1-L grab  50 5000
## 299          surface water                         1-L grab  50 5000
## 300          surface water                         1-L grab  50 5000
## 301          surface water                         1-L grab  50 5000
## 302          surface water                         1-L grab  50 5000
## 303          surface water                         1-L grab  50 5000
## 304          surface water                         1-L grab  50 5000
## 305          surface water                         1-L grab  50 5000
## 306          surface water                         1-L grab  50 5000
## 307          surface water                         1-L grab  50 5000
## 308          surface water                         1-L grab  50 5000
## 309          surface water                         1-L grab  50 5000
## 310          surface water                         1-L grab  50 5000
## 311          surface water                         1-L grab  50 5000
## 312          surface water                         1-L grab  50 5000
## 313          surface water                         1-L grab  50 5000
## 314          surface water                         1-L grab  50 5000
## 315          surface water                         1-L grab  50 5000
##     Sample.Type season fiber.correction.factor fiber.correction.factor.sd
## 1        sample   <NA>                1.000000                         NA
## 2        sample   <NA>                1.000000                         NA
## 3        sample   <NA>                1.000000                         NA
## 4        sample   <NA>                1.000000                         NA
## 5        sample   <NA>                1.000000                         NA
## 6        sample   <NA>                1.000000                         NA
## 7        sample   <NA>                1.000000                         NA
## 8        sample   <NA>                1.000000                         NA
## 9        sample   <NA>                1.000000                         NA
## 10       sample   <NA>                1.000000                         NA
## 11       sample   <NA>                1.000000                         NA
## 12       sample   <NA>                1.000000                         NA
## 13       sample    dry                1.000000                         NA
## 14       sample    dry                1.000000                         NA
## 15       sample    dry                1.000000                         NA
## 16       sample    dry                1.000000                         NA
## 17       sample    dry                1.000000                         NA
## 18       sample   <NA>                1.000000                         NA
## 19       sample    dry                1.000000                         NA
## 20       sample    dry                1.000000                         NA
## 21       sample    dry                1.000000                         NA
## 22       sample    dry                1.000000                         NA
## 23       sample    dry                1.000000                         NA
## 24       sample    dry                1.000000                         NA
## 25       sample   <NA>                1.000000                         NA
## 26       sample    wet                1.000000                         NA
## 27       sample    wet                1.000000                         NA
## 28       sample   <NA>                1.000000                         NA
## 29       sample    wet                1.000000                         NA
## 30       sample   <NA>                1.000000                         NA
## 31       sample   <NA>                1.000000                         NA
## 32       sample   <NA>                1.000000                         NA
## 33       sample   <NA>                1.000000                         NA
## 34       sample   <NA>                1.000000                         NA
## 35       sample   <NA>                1.000000                         NA
## 36       sample   <NA>                1.000000                         NA
## 37       sample   <NA>                1.000000                         NA
## 38       sample   <NA>                1.000000                         NA
## 39       sample   <NA>                1.000000                         NA
## 40       sample   <NA>                1.000000                         NA
## 41       sample   <NA>                1.000000                         NA
## 42       sample   <NA>                1.000000                         NA
## 43       sample   <NA>                1.000000                         NA
## 44       sample   <NA>                1.000000                         NA
## 45       sample   <NA>                1.000000                         NA
## 46       sample   <NA>                1.000000                         NA
## 47       sample   <NA>                1.000000                         NA
## 48       sample   <NA>                1.000000                         NA
## 49       sample   <NA>                1.000000                         NA
## 50       sample   <NA>                1.000000                         NA
## 51       sample   <NA>                1.000000                         NA
## 52       sample   <NA>                1.000000                         NA
## 53       sample   <NA>                1.000000                         NA
## 54       sample   <NA>                1.000000                         NA
## 55       sample   <NA>                1.000000                         NA
## 56       sample   <NA>                1.000000                         NA
## 57       sample   <NA>                1.000000                         NA
## 58       sample   <NA>                1.000000                         NA
## 59       sample   <NA>                1.000000                         NA
## 60       sample   <NA>                1.000000                         NA
## 61       sample   <NA>                1.000000                         NA
## 62       sample   <NA>                1.000000                         NA
## 63       sample   <NA>                1.000000                         NA
## 64       sample   <NA>                1.000000                         NA
## 65       sample   <NA>                1.000000                         NA
## 66       sample   <NA>                1.000000                         NA
## 67       sample   <NA>                1.000000                         NA
## 68       sample   <NA>                1.000000                         NA
## 69       sample   <NA>                1.000000                         NA
## 70       sample   <NA>                1.000000                         NA
## 71       sample   <NA>                1.000000                         NA
## 72       sample   <NA>                1.000000                         NA
## 73       sample   <NA>                1.000000                         NA
## 74       sample   <NA>                1.000000                         NA
## 75       sample   <NA>                1.000000                         NA
## 76       sample   <NA>                1.000000                         NA
## 77       sample   <NA>                1.000000                         NA
## 78       sample   <NA>                1.000000                         NA
## 79       sample   <NA>                1.000000                         NA
## 80       sample   <NA>                1.000000                         NA
## 81       sample   <NA>                1.000000                         NA
## 82       sample   <NA>                1.000000                         NA
## 83       sample   <NA>                1.000000                         NA
## 84       sample   <NA>                1.000000                         NA
## 85       sample   <NA>                1.000000                         NA
## 86       sample   <NA>                1.000000                         NA
## 87       sample   <NA>                1.000000                         NA
## 88       sample   <NA>                1.000000                         NA
## 89       sample   <NA>                1.000000                         NA
## 90       sample   <NA>                1.000000                         NA
## 91       sample   <NA>                1.000000                         NA
## 92       sample   <NA>                1.000000                         NA
## 93       sample   <NA>                1.000000                         NA
## 94       sample   <NA>                1.000000                         NA
## 95       sample   <NA>                1.000000                         NA
## 96       sample   <NA>                1.000000                         NA
## 97       sample   <NA>                1.000000                         NA
## 98       sample   <NA>                1.000000                         NA
## 99       sample   <NA>                1.000000                         NA
## 100      sample   <NA>                1.000000                         NA
## 101      sample   <NA>                1.000000                         NA
## 102      sample   <NA>                1.000000                         NA
## 103      sample   <NA>                1.000000                         NA
## 104      sample   <NA>                1.000000                         NA
## 105      sample   <NA>                1.000000                         NA
## 106      sample   <NA>                1.000000                         NA
## 107      sample   <NA>                1.000000                         NA
## 108      sample   <NA>                1.000000                         NA
## 109      sample   <NA>                1.000000                         NA
## 110      sample   <NA>                1.000000                         NA
## 111      sample   <NA>                1.000000                         NA
## 112      sample   <NA>                1.000000                         NA
## 113      sample   <NA>                1.000000                         NA
## 114      sample   <NA>                1.000000                         NA
## 115      sample   <NA>                1.000000                         NA
## 116      sample   <NA>                1.000000                         NA
## 117      sample   <NA>                1.000000                         NA
## 118      sample   <NA>                1.000000                         NA
## 119      sample   <NA>                1.000000                         NA
## 120      sample   <NA>                1.000000                         NA
## 121      sample   <NA>                1.000000                         NA
## 122      sample   <NA>                1.000000                         NA
## 123      sample   <NA>                1.000000                         NA
## 124      sample   <NA>                1.000000                         NA
## 125      sample   <NA>                1.000000                         NA
## 126      sample   <NA>                1.000000                         NA
## 127      sample   <NA>                1.000000                         NA
## 128      sample   <NA>                1.000000                         NA
## 129      sample   <NA>                1.000000                         NA
## 130      sample   <NA>                1.000000                         NA
## 131      sample   <NA>                1.000000                         NA
## 132      sample   <NA>                1.000000                         NA
## 133      sample   <NA>                1.000000                         NA
## 134      sample   <NA>                1.000000                         NA
## 135      sample   <NA>                1.000000                         NA
## 136      sample   <NA>                1.000000                         NA
## 137      sample   <NA>                1.000000                         NA
## 138      sample   <NA>                1.000000                         NA
## 139      sample   <NA>                1.000000                         NA
## 140      sample   <NA>                1.000000                         NA
## 141      sample   <NA>                1.000000                         NA
## 142      sample   <NA>                1.000000                         NA
## 143      sample   <NA>                1.000000                         NA
## 144      sample   <NA>                1.000000                         NA
## 145      sample   <NA>                1.000000                         NA
## 146      sample   <NA>                1.000000                         NA
## 147      sample   <NA>                1.000000                         NA
## 148      sample   <NA>                1.000000                         NA
## 149      sample   <NA>                1.000000                         NA
## 150      sample   <NA>                1.000000                         NA
## 151      sample   <NA>                1.000000                         NA
## 152      sample   <NA>                1.000000                         NA
## 153      sample   <NA>                1.000000                         NA
## 154      sample   <NA>                1.000000                         NA
## 155      sample   <NA>                1.000000                         NA
## 156      sample   <NA>                1.000000                         NA
## 157      sample   <NA>                1.000000                         NA
## 158      sample   <NA>                1.000000                         NA
## 159      sample   <NA>                1.000000                         NA
## 160      sample   <NA>                1.000000                         NA
## 161      sample   <NA>                1.000000                         NA
## 162      sample   <NA>                1.000000                         NA
## 163      sample   <NA>                1.000000                         NA
## 164      sample   <NA>                1.000000                         NA
## 165      sample   <NA>                1.000000                         NA
## 166      sample   <NA>                1.000000                         NA
## 167      sample   <NA>                1.000000                         NA
## 168      sample   <NA>                1.000000                         NA
## 169      sample   <NA>                1.000000                         NA
## 170      sample   <NA>                1.000000                         NA
## 171      sample   <NA>                1.000000                         NA
## 172      sample   <NA>                1.000000                         NA
## 173      sample   <NA>                1.000000                         NA
## 174      sample   <NA>                1.000000                         NA
## 175      sample   <NA>                1.000000                         NA
## 176      sample   <NA>                1.000000                         NA
## 177      sample   <NA>                1.000000                         NA
## 178      sample   <NA>                1.000000                         NA
## 179      sample   <NA>                1.000000                         NA
## 180      sample   <NA>                1.000000                         NA
## 181      sample   <NA>                1.000000                         NA
## 182      sample   <NA>                1.000000                         NA
## 183      sample   <NA>                1.000000                         NA
## 184      sample   <NA>                1.000000                         NA
## 185      sample   <NA>                1.000000                         NA
## 186      sample   <NA>                1.000000                         NA
## 187      sample   <NA>                1.000000                         NA
## 188      sample   <NA>                1.000000                         NA
## 189      sample   <NA>                1.000000                         NA
## 190      sample   <NA>                1.000000                         NA
## 191      sample   <NA>                1.000000                         NA
## 192      sample   <NA>                1.000000                         NA
## 193      sample   <NA>                1.000000                         NA
## 194      sample   <NA>                1.000000                         NA
## 195      sample   <NA>                1.000000                         NA
## 196      sample   <NA>                1.000000                         NA
## 197      sample   <NA>                1.000000                         NA
## 198      sample   <NA>                1.000000                         NA
## 199      sample   <NA>                1.000000                         NA
## 200      sample   <NA>                1.000000                         NA
## 201      sample   <NA>                1.000000                         NA
## 202      sample    dry                4.598399                   1.393976
## 203      sample    wet                4.598399                   1.393976
## 204      sample    dry                4.598399                   1.393976
## 205      sample    wet                4.598399                   1.393976
## 206      sample    wet                4.598399                   1.393976
## 207      sample    dry                4.598399                   1.393976
## 208      sample    wet                4.598399                   1.393976
## 209      sample    dry                4.598399                   1.393976
## 210      sample    wet                4.598399                   1.393976
## 211      sample    dry                4.598399                   1.393976
## 212      sample    wet                4.598399                   1.393976
## 213      sample    dry                4.598399                   1.393976
## 214      sample    wet                4.598399                   1.393976
## 215      sample    wet                4.598399                   1.393976
## 216      sample    dry                4.598399                   1.393976
## 217      sample    wet                4.598399                   1.393976
## 218      sample    dry                4.598399                   1.393976
## 219      sample    dry                4.598399                   1.393976
## 220      sample    wet                4.598399                   1.393976
## 221      sample    wet                4.598399                   1.393976
## 222      sample    dry                4.598399                   1.393976
## 223      sample    wet                4.598399                   1.393976
## 224      sample    dry                4.598399                   1.393976
## 225      sample    wet                4.598399                   1.393976
## 226      sample    dry                4.598399                   1.393976
## 227      sample    wet                4.598399                   1.393976
## 228      sample    dry                4.598399                   1.393976
## 229      sample    dry                4.598399                   1.393976
## 230      sample    wet                4.598399                   1.393976
## 231      sample    dry                4.598399                   1.393976
## 232      sample    wet                4.598399                   1.393976
## 233      sample    dry                4.598399                   1.393976
## 234      sample    wet                4.598399                   1.393976
## 235      sample    wet                4.598399                   1.393976
## 236      sample    wet                4.598399                   1.393976
## 237      sample    wet                4.598399                   1.393976
## 238      sample    dry                4.598399                   1.393976
## 239      sample    wet                4.598399                   1.393976
## 240      sample    dry                4.598399                   1.393976
## 241      sample    wet                4.598399                   1.393976
## 242      sample    dry                4.598399                   1.393976
## 243      sample    wet                4.598399                   1.393976
## 244      sample    dry                4.598399                   1.393976
## 245      sample    dry                4.598399                   1.393976
## 246      sample    wet                4.598399                   1.393976
## 247      sample    dry                4.598399                   1.393976
## 248      sample    wet                4.598399                   1.393976
## 249      sample    dry                4.598399                   1.393976
## 250      sample    wet                4.598399                   1.393976
## 251      sample    dry                4.598399                   1.393976
## 252      sample    wet                4.598399                   1.393976
## 253      sample    dry                4.598399                   1.393976
## 254      sample    dry                4.598399                   1.393976
## 255      sample    dry                4.598399                   1.393976
## 256      sample    dry                4.598399                   1.393976
## 257      sample    wet                4.598399                   1.393976
## 258      sample    wet                4.598399                   1.393976
## 259      sample    dry                4.598399                   1.393976
## 260      sample    dry                4.598399                   1.393976
## 261      sample    wet                4.598399                   1.393976
## 262      sample    wet                4.598399                   1.393976
## 263      sample    dry                4.598399                   1.393976
## 264      sample    dry                4.598399                   1.393976
## 265      sample    wet                4.598399                   1.393976
## 266      sample    wet                4.598399                   1.393976
## 267      sample    dry                1.000000                         NA
## 268      sample    wet                1.000000                         NA
## 269      sample    dry                1.000000                         NA
## 270      sample    wet                1.000000                         NA
## 271      sample    dry                1.000000                         NA
## 272      sample    wet                1.000000                         NA
## 273      sample    dry                1.000000                         NA
## 274      sample    wet                1.000000                         NA
## 275      sample    dry                1.000000                         NA
## 276      sample    wet                1.000000                         NA
## 277      sample    dry                1.000000                         NA
## 278      sample    wet                1.000000                         NA
## 279      sample    dry                1.000000                         NA
## 280      sample    dry                1.000000                         NA
## 281      sample    dry                1.000000                         NA
## 282      sample    wet                1.000000                         NA
## 283      sample    wet                1.000000                         NA
## 284      sample    dry                1.000000                         NA
## 285      sample    dry                1.000000                         NA
## 286      sample    dry                1.000000                         NA
## 287      sample    dry                1.000000                         NA
## 288      sample    wet                1.000000                         NA
## 289      sample    wet                1.000000                         NA
## 290      sample    dry                1.000000                         NA
## 291      sample    wet                1.000000                         NA
## 292      sample    wet                1.000000                         NA
## 293      sample    wet                1.000000                         NA
## 294      sample    wet                1.000000                         NA
## 295      sample    wet                1.000000                         NA
## 296      sample    dry                1.000000                         NA
## 297      sample    wet                1.000000                         NA
## 298      sample    dry                1.000000                         NA
## 299      sample    wet                1.000000                         NA
## 300      sample    dry                1.000000                         NA
## 301      sample    wet                1.000000                         NA
## 302      sample    dry                1.000000                         NA
## 303      sample    dry                1.000000                         NA
## 304      sample    wet                1.000000                         NA
## 305      sample    dry                1.000000                         NA
## 306      sample    wet                1.000000                         NA
## 307      sample    wet                1.000000                         NA
## 308      sample    dry                1.000000                         NA
## 309      sample    wet                1.000000                         NA
## 310      sample    dry                1.000000                         NA
## 311      sample    wet                1.000000                         NA
## 312      sample    dry                1.000000                         NA
## 313      sample    wet                1.000000                         NA
## 314      sample    dry                1.000000                         NA
## 315      sample    wet                1.000000                         NA
##     fiber.correction.factor.n particles.L.blank.corrected.fiber.corrected
## 1                          NA                                1.630000e+00
## 2                          NA                                1.650000e+00
## 3                          NA                                7.200000e+00
## 4                          NA                                5.630000e+00
## 5                          NA                                4.940000e+00
## 6                          NA                                8.430000e+00
## 7                          NA                                1.006000e+01
## 8                          NA                                2.310000e+00
## 9                          NA                                1.090000e+00
## 10                         NA                                1.784000e+01
## 11                         NA                                1.236000e+01
## 12                         NA                                2.441000e+01
## 13                         NA                                6.450000e-02
## 14                         NA                                1.150000e-02
## 15                         NA                                1.778000e-01
## 16                         NA                                4.210000e-02
## 17                         NA                                3.000000e-03
## 18                         NA                                5.400000e-03
## 19                         NA                                1.860000e-02
## 20                         NA                                2.330000e-02
## 21                         NA                                2.220000e-02
## 22                         NA                                7.780000e-02
## 23                         NA                                3.700000e-03
## 24                         NA                                5.500000e-03
## 25                         NA                                1.083000e-01
## 26                         NA                                1.593000e-01
## 27                         NA                                1.816000e-01
## 28                         NA                                7.500000e-03
## 29                         NA                                6.830000e-02
## 30                         NA                                          NA
## 31                         NA                                          NA
## 32                         NA                                          NA
## 33                         NA                                          NA
## 34                         NA                                          NA
## 35                         NA                                          NA
## 36                         NA                                          NA
## 37                         NA                                          NA
## 38                         NA                                          NA
## 39                         NA                                          NA
## 40                         NA                                          NA
## 41                         NA                                          NA
## 42                         NA                                          NA
## 43                         NA                                          NA
## 44                         NA                                          NA
## 45                         NA                                          NA
## 46                         NA                                          NA
## 47                         NA                                          NA
## 48                         NA                                          NA
## 49                         NA                                          NA
## 50                         NA                                          NA
## 51                         NA                                          NA
## 52                         NA                                          NA
## 53                         NA                                          NA
## 54                         NA                                          NA
## 55                         NA                                          NA
## 56                         NA                                          NA
## 57                         NA                                          NA
## 58                         NA                                          NA
## 59                         NA                                          NA
## 60                         NA                                          NA
## 61                         NA                                          NA
## 62                         NA                                          NA
## 63                         NA                                          NA
## 64                         NA                                          NA
## 65                         NA                                          NA
## 66                         NA                                          NA
## 67                         NA                                          NA
## 68                         NA                                          NA
## 69                         NA                                          NA
## 70                         NA                                          NA
## 71                         NA                                          NA
## 72                         NA                                          NA
## 73                         NA                                          NA
## 74                         NA                                          NA
## 75                         NA                                          NA
## 76                         NA                                          NA
## 77                         NA                                          NA
## 78                         NA                                          NA
## 79                         NA                                          NA
## 80                         NA                                          NA
## 81                         NA                                          NA
## 82                         NA                                          NA
## 83                         NA                                          NA
## 84                         NA                                          NA
## 85                         NA                                          NA
## 86                         NA                                          NA
## 87                         NA                                          NA
## 88                         NA                                          NA
## 89                         NA                                          NA
## 90                         NA                                          NA
## 91                         NA                                          NA
## 92                         NA                                          NA
## 93                         NA                                          NA
## 94                         NA                                          NA
## 95                         NA                                          NA
## 96                         NA                                          NA
## 97                         NA                                          NA
## 98                         NA                                          NA
## 99                         NA                                          NA
## 100                        NA                                          NA
## 101                        NA                                          NA
## 102                        NA                                          NA
## 103                        NA                                          NA
## 104                        NA                                          NA
## 105                        NA                                          NA
## 106                        NA                                          NA
## 107                        NA                                          NA
## 108                        NA                                          NA
## 109                        NA                                          NA
## 110                        NA                                          NA
## 111                        NA                                          NA
## 112                        NA                                          NA
## 113                        NA                                          NA
## 114                        NA                                          NA
## 115                        NA                                          NA
## 116                        NA                                          NA
## 117                        NA                                          NA
## 118                        NA                                          NA
## 119                        NA                                          NA
## 120                        NA                                          NA
## 121                        NA                                          NA
## 122                        NA                                          NA
## 123                        NA                                          NA
## 124                        NA                                          NA
## 125                        NA                                          NA
## 126                        NA                                          NA
## 127                        NA                                          NA
## 128                        NA                                          NA
## 129                        NA                                          NA
## 130                        NA                                          NA
## 131                        NA                                          NA
## 132                        NA                                          NA
## 133                        NA                                          NA
## 134                        NA                                          NA
## 135                        NA                                          NA
## 136                        NA                                          NA
## 137                        NA                                          NA
## 138                        NA                                          NA
## 139                        NA                                          NA
## 140                        NA                                          NA
## 141                        NA                                          NA
## 142                        NA                                          NA
## 143                        NA                                          NA
## 144                        NA                                          NA
## 145                        NA                                          NA
## 146                        NA                                          NA
## 147                        NA                                          NA
## 148                        NA                                          NA
## 149                        NA                                          NA
## 150                        NA                                          NA
## 151                        NA                                          NA
## 152                        NA                                          NA
## 153                        NA                                          NA
## 154                        NA                                          NA
## 155                        NA                                          NA
## 156                        NA                                          NA
## 157                        NA                                          NA
## 158                        NA                                          NA
## 159                        NA                                          NA
## 160                        NA                                          NA
## 161                        NA                                          NA
## 162                        NA                                          NA
## 163                        NA                                          NA
## 164                        NA                                          NA
## 165                        NA                                          NA
## 166                        NA                                          NA
## 167                        NA                                          NA
## 168                        NA                                          NA
## 169                        NA                                          NA
## 170                        NA                                          NA
## 171                        NA                                          NA
## 172                        NA                                          NA
## 173                        NA                                          NA
## 174                        NA                                          NA
## 175                        NA                                          NA
## 176                        NA                                          NA
## 177                        NA                                          NA
## 178                        NA                                          NA
## 179                        NA                                          NA
## 180                        NA                                          NA
## 181                        NA                                          NA
## 182                        NA                                          NA
## 183                        NA                                          NA
## 184                        NA                                          NA
## 185                        NA                                          NA
## 186                        NA                                          NA
## 187                        NA                                          NA
## 188                        NA                                          NA
## 189                        NA                                          NA
## 190                        NA                                          NA
## 191                        NA                                          NA
## 192                        NA                                          NA
## 193                        NA                                          NA
## 194                        NA                                          NA
## 195                        NA                                          NA
## 196                        NA                                          NA
## 197                        NA                                          NA
## 198                        NA                                          NA
## 199                        NA                                          NA
## 200                        NA                                          NA
## 201                        NA                                          NA
## 202                         9                                1.057632e-04
## 203                         9                                2.811461e-02
## 204                         9                                2.018697e-03
## 205                         9                                8.681777e-03
## 206                         9                                2.349782e-03
## 207                         9                                3.816671e-04
## 208                         9                                2.133657e-03
## 209                         9                                3.559161e-03
## 210                         9                                3.352233e-03
## 211                         9                                1.041537e-02
## 212                         9                                1.997085e-02
## 213                         9                                8.644990e-04
## 214                         9                                2.556296e-01
## 215                         9                                4.046591e-04
## 216                         9                                7.495391e-04
## 217                         9                                5.793983e-04
## 218                         9                                6.391775e-04
## 219                         9                                0.000000e+00
## 220                         9                                1.057632e-04
## 221                         9                                1.002451e-03
## 222                         9                                9.196798e-05
## 223                         9                                3.632735e-04
## 224                         9                                6.391775e-04
## 225                         9                                3.586751e-04
## 226                         9                                2.299200e-05
## 227                         9                                4.414463e-04
## 228                         9                                2.575103e-04
## 229                         9                                4.515628e-03
## 230                         9                                1.223174e-03
## 231                         9                                1.641628e-03
## 232                         9                                1.140403e-03
## 233                         9                                7.035551e-04
## 234                         9                                2.372774e-03
## 235                         9                                1.820966e-03
## 236                         9                                1.351929e-03
## 237                         9                                1.255363e-03
## 238                         9                                8.736958e-05
## 239                         9                                1.747392e-04
## 240                         9                                3.126911e-04
## 241                         9                                2.483136e-04
## 242                         9                                1.747392e-04
## 243                         9                                3.126911e-04
## 244                         9                                1.103616e-04
## 245                         9                                5.150207e-04
## 246                         9                                1.085222e-03
## 247                         9                                8.323102e-04
## 248                         9                                1.197883e-02
## 249                         9                                5.885951e-04
## 250                         9                                2.244019e-03
## 251                         9                                1.333076e-02
## 252                         9                                6.364184e-03
## 253                         9                                1.958918e-03
## 254                         9                                1.958918e-03
## 255                         9                                2.713055e-04
## 256                         9                                2.713055e-04
## 257                         9                                4.230527e-04
## 258                         9                                4.230527e-04
## 259                         9                                2.929180e-03
## 260                         9                                2.929180e-03
## 261                         9                                6.479144e-03
## 262                         9                                6.479144e-03
## 263                         9                                3.724703e-04
## 264                         9                                3.724703e-04
## 265                         9                                6.023903e-04
## 266                         9                                6.023903e-04
## 267                        NA                                3.465347e+00
## 268                        NA                                2.734878e+00
## 269                        NA                                7.433102e+00
## 270                        NA                                6.277464e-01
## 271                        NA                                1.950959e+00
## 272                        NA                                4.984424e+00
## 273                        NA                                2.325107e+00
## 274                        NA                                1.582779e+00
## 275                        NA                                2.703562e+00
## 276                        NA                                2.551020e+00
## 277                        NA                                6.578947e+00
## 278                        NA                                1.871102e+01
## 279                        NA                                3.000000e+00
## 280                        NA                                1.640420e+00
## 281                        NA                                8.671523e+00
## 282                        NA                                6.523157e-01
## 283                        NA                                0.000000e+00
## 284                        NA                                1.811594e+00
## 285                        NA                                7.095745e-01
## 286                        NA                                1.262626e+00
## 287                        NA                                3.664755e+00
## 288                        NA                                3.098500e+00
## 289                        NA                                1.279591e+00
## 290                        NA                                7.619048e+00
## 291                        NA                                2.412281e+00
## 292                        NA                                1.357323e+01
## 293                        NA                                2.383222e+00
## 294                        NA                                9.433962e-01
## 295                        NA                                3.570315e+01
## 296                        NA                                2.252599e+00
## 297                        NA                                2.202268e+00
## 298                        NA                                1.605652e+00
## 299                        NA                                4.269450e+00
## 300                        NA                                3.502069e+00
## 301                        NA                                1.876590e+01
## 302                        NA                                6.298450e+00
## 303                        NA                                9.980040e-01
## 304                        NA                                6.144393e+00
## 305                        NA                                3.346080e+00
## 306                        NA                                1.595745e+00
## 307                        NA                                2.666667e+00
## 308                        NA                                4.338395e+00
## 309                        NA                                9.931383e+00
## 310                        NA                                3.333333e+00
## 311                        NA                                2.833333e+00
## 312                        NA                                5.086072e+00
## 313                        NA                                5.243089e+00
## 314                        NA                                2.764613e+00
## 315                        NA                                4.427577e+00
##                   locationNew                matrix
## 1                     general                 Storm
## 2                     general                 Storm
## 3                     general                 Storm
## 4                     general                 Storm
## 5                     general                 Storm
## 6                     general                 Storm
## 7                     general                 Storm
## 8                     general                 Storm
## 9                     general                 Storm
## 10                    general                 Storm
## 11                    general                 Storm
## 12                    general                 Storm
## 13                    general                  WWTP
## 14                    general                  WWTP
## 15                    general                  WWTP
## 16                    general                  WWTP
## 17                    general                  WWTP
## 18                    general                  WWTP
## 19                    general                  WWTP
## 20                    general                  WWTP
## 21                    general                  WWTP
## 22                    general                  WWTP
## 23                    general                  WWTP
## 24                    general                  WWTP
## 25                    general                  WWTP
## 26                    general                  WWTP
## 27                    general                  WWTP
## 28                    general                  WWTP
## 29                    general                  WWTP
## 30            Lower South Bay                  Fish
## 31            Lower South Bay                  Fish
## 32            Lower South Bay                  Fish
## 33            Lower South Bay                  Fish
## 34            Lower South Bay                  Fish
## 35            Lower South Bay                  Fish
## 36            Lower South Bay                  Fish
## 37            Lower South Bay                  Fish
## 38            Lower South Bay                  Fish
## 39            Lower South Bay                  Fish
## 40            Lower South Bay                  Fish
## 41            Lower South Bay                  Fish
## 42            Lower South Bay                  Fish
## 43            Lower South Bay                  Fish
## 44                Tomales Bay                  Fish
## 45                Tomales Bay                  Fish
## 46                Tomales Bay                  Fish
## 47                Tomales Bay                  Fish
## 48                Tomales Bay                  Fish
## 49                Tomales Bay                  Fish
## 50                Tomales Bay                  Fish
## 51                Tomales Bay                  Fish
## 52                Tomales Bay                  Fish
## 53                Tomales Bay                  Fish
## 54                Tomales Bay                  Fish
## 55                Tomales Bay                  Fish
## 56                Tomales Bay                  Fish
## 57                Tomales Bay                  Fish
## 58                Tomales Bay                  Fish
## 59                Tomales Bay                  Fish
## 60                Tomales Bay                  Fish
## 61                Tomales Bay                  Fish
## 62                Tomales Bay                  Fish
## 63                Tomales Bay                  Fish
## 64                Tomales Bay                  Fish
## 65                Tomales Bay                  Fish
## 66                Tomales Bay                  Fish
## 67                Tomales Bay                  Fish
## 68                Tomales Bay                  Fish
## 69                Tomales Bay                  Fish
## 70                Tomales Bay                  Fish
## 71                Tomales Bay                  Fish
## 72                Tomales Bay                  Fish
## 73                Tomales Bay                  Fish
## 74                Central Bay                  Fish
## 75                Central Bay                  Fish
## 76                Central Bay                  Fish
## 77                Central Bay                  Fish
## 78                Central Bay                  Fish
## 79                Central Bay                  Fish
## 80                Central Bay                  Fish
## 81                Central Bay                  Fish
## 82                Central Bay                  Fish
## 83                Central Bay                  Fish
## 84                Central Bay                  Fish
## 85                Central Bay                  Fish
## 86                Central Bay                  Fish
## 87                Central Bay                  Fish
## 88                Central Bay                  Fish
## 89                Central Bay                  Fish
## 90                Central Bay                  Fish
## 91                Central Bay                  Fish
## 92                Central Bay                  Fish
## 93                Central Bay                  Fish
## 94                Central Bay                  Fish
## 95                Central Bay                  Fish
## 96                Central Bay                  Fish
## 97                Central Bay                  Fish
## 98                Central Bay                  Fish
## 99                Central Bay                  Fish
## 100               Central Bay                  Fish
## 101               Central Bay                  Fish
## 102               Central Bay                  Fish
## 103               Central Bay                  Fish
## 104               Central Bay                  Fish
## 105               Central Bay                  Fish
## 106               Central Bay                  Fish
## 107               Central Bay                  Fish
## 108               Central Bay                  Fish
## 109               Central Bay                  Fish
## 110               Central Bay                  Fish
## 111               Central Bay                  Fish
## 112                   general                  Fish
## 113                   general                  Fish
## 114                   general                  Fish
## 115                   general                  Fish
## 116                   general                  Fish
## 117                   general                  Fish
## 118                   general                  Fish
## 119                   general                  Fish
## 120                   general                  Fish
## 121                   general                  Fish
## 122                 South Bay                  Fish
## 123                 South Bay                  Fish
## 124                 South Bay                  Fish
## 125                 South Bay                  Fish
## 126                 South Bay                  Fish
## 127                 South Bay                  Fish
## 128                 South Bay                  Fish
## 129                 South Bay                  Fish
## 130                 South Bay                  Fish
## 131                 South Bay                  Fish
## 132                 South Bay                  Fish
## 133                 South Bay                  Fish
## 134                 South Bay                  Fish
## 135                 South Bay                  Fish
## 136                 South Bay                  Fish
## 137                 South Bay                  Fish
## 138                 South Bay                  Fish
## 139                 South Bay                  Fish
## 140                 South Bay                  Fish
## 141                 South Bay                  Fish
## 142               Central Bay                  Fish
## 143               Central Bay                  Fish
## 144               Central Bay                  Fish
## 145               Central Bay                  Fish
## 146               Central Bay                  Fish
## 147               Central Bay                  Fish
## 148               Central Bay                  Fish
## 149               Central Bay                  Fish
## 150               Central Bay                  Fish
## 151               Central Bay                  Fish
## 152               Central Bay                  Fish
## 153               Central Bay                  Fish
## 154               Central Bay                  Fish
## 155               Central Bay                  Fish
## 156               Central Bay                  Fish
## 157               Central Bay                  Fish
## 158               Central Bay                  Fish
## 159               Central Bay                  Fish
## 160               Central Bay                  Fish
## 161               Central Bay                  Fish
## 162                   general                  Fish
## 163                   general                  Fish
## 164                   general                  Fish
## 165                   general                  Fish
## 166                   general                  Fish
## 167                   general                  Fish
## 168                   general                  Fish
## 169                   general                  Fish
## 170                   general                  Fish
## 171                   general                  Fish
## 172               Tomales Bay                  Fish
## 173               Tomales Bay                  Fish
## 174               Tomales Bay                  Fish
## 175               Tomales Bay                  Fish
## 176               Tomales Bay                  Fish
## 177               Tomales Bay                  Fish
## 178               Tomales Bay                  Fish
## 179               Tomales Bay                  Fish
## 180               Tomales Bay                  Fish
## 181               Tomales Bay                  Fish
## 182                   general              Sediment
## 183               Central Bay              Sediment
## 184               Central Bay              Sediment
## 185               Central Bay              Sediment
## 186               Central Bay              Sediment
## 187           Lower South Bay              Sediment
## 188           Lower South Bay              Sediment
## 189           Lower South Bay              Sediment
## 190                   general              Sediment
## 191                 South Bay              Sediment
## 192                 South Bay              Sediment
## 193                 South Bay              Sediment
## 194                   general              Sediment
## 195                   general              Sediment
## 196                   general              Sediment
## 197                   general              Sediment
## 198                   general              Sediment
## 199                   general              Sediment
## 200               Tomales Bay              Sediment
## 201               Tomales Bay              Sediment
## 202               Central Bay Surface (Manta Trawl)
## 203               Central Bay Surface (Manta Trawl)
## 204               Central Bay Surface (Manta Trawl)
## 205               Central Bay Surface (Manta Trawl)
## 206               Central Bay Surface (Manta Trawl)
## 207               Central Bay Surface (Manta Trawl)
## 208               Central Bay Surface (Manta Trawl)
## 209               Central Bay Surface (Manta Trawl)
## 210               Central Bay Surface (Manta Trawl)
## 211               Central Bay Surface (Manta Trawl)
## 212               Central Bay Surface (Manta Trawl)
## 213               Central Bay Surface (Manta Trawl)
## 214               Central Bay Surface (Manta Trawl)
## 215 National Marine Sanctuary Surface (Manta Trawl)
## 216 National Marine Sanctuary Surface (Manta Trawl)
## 217 National Marine Sanctuary Surface (Manta Trawl)
## 218 National Marine Sanctuary Surface (Manta Trawl)
## 219 National Marine Sanctuary Surface (Manta Trawl)
## 220 National Marine Sanctuary Surface (Manta Trawl)
## 221 National Marine Sanctuary Surface (Manta Trawl)
## 222 National Marine Sanctuary Surface (Manta Trawl)
## 223 National Marine Sanctuary Surface (Manta Trawl)
## 224 National Marine Sanctuary Surface (Manta Trawl)
## 225 National Marine Sanctuary Surface (Manta Trawl)
## 226 National Marine Sanctuary Surface (Manta Trawl)
## 227 National Marine Sanctuary Surface (Manta Trawl)
## 228 National Marine Sanctuary Surface (Manta Trawl)
## 229           Lower South Bay Surface (Manta Trawl)
## 230           Lower South Bay Surface (Manta Trawl)
## 231           Lower South Bay Surface (Manta Trawl)
## 232           Lower South Bay Surface (Manta Trawl)
## 233           Lower South Bay Surface (Manta Trawl)
## 234           Lower South Bay Surface (Manta Trawl)
## 235 National Marine Sanctuary Surface (Manta Trawl)
## 236 National Marine Sanctuary Surface (Manta Trawl)
## 237 National Marine Sanctuary Surface (Manta Trawl)
## 238 National Marine Sanctuary Surface (Manta Trawl)
## 239 National Marine Sanctuary Surface (Manta Trawl)
## 240 National Marine Sanctuary Surface (Manta Trawl)
## 241 National Marine Sanctuary Surface (Manta Trawl)
## 242 National Marine Sanctuary Surface (Manta Trawl)
## 243 National Marine Sanctuary Surface (Manta Trawl)
## 244 National Marine Sanctuary Surface (Manta Trawl)
## 245                 South Bay Surface (Manta Trawl)
## 246                 South Bay Surface (Manta Trawl)
## 247                 South Bay Surface (Manta Trawl)
## 248                 South Bay Surface (Manta Trawl)
## 249                 South Bay Surface (Manta Trawl)
## 250                 South Bay Surface (Manta Trawl)
## 251                 South Bay Surface (Manta Trawl)
## 252                 South Bay Surface (Manta Trawl)
## 253                   general Surface (Manta Trawl)
## 254                   general Surface (Manta Trawl)
## 255                   general Surface (Manta Trawl)
## 256                   general Surface (Manta Trawl)
## 257                   general Surface (Manta Trawl)
## 258                   general Surface (Manta Trawl)
## 259                   general Surface (Manta Trawl)
## 260                   general Surface (Manta Trawl)
## 261                   general Surface (Manta Trawl)
## 262                   general Surface (Manta Trawl)
## 263                   general Surface (Manta Trawl)
## 264                   general Surface (Manta Trawl)
## 265                   general Surface (Manta Trawl)
## 266                   general Surface (Manta Trawl)
## 267               Central Bay     Surface (1L-grab)
## 268               Central Bay     Surface (1L-grab)
## 269               Central Bay     Surface (1L-grab)
## 270               Central Bay     Surface (1L-grab)
## 271               Central Bay     Surface (1L-grab)
## 272               Central Bay     Surface (1L-grab)
## 273               Central Bay     Surface (1L-grab)
## 274               Central Bay     Surface (1L-grab)
## 275               Central Bay     Surface (1L-grab)
## 276               Central Bay     Surface (1L-grab)
## 277               Central Bay     Surface (1L-grab)
## 278               Central Bay     Surface (1L-grab)
## 279 National Marine Sanctuary     Surface (1L-grab)
## 280 National Marine Sanctuary     Surface (1L-grab)
## 281 National Marine Sanctuary     Surface (1L-grab)
## 282 National Marine Sanctuary     Surface (1L-grab)
## 283 National Marine Sanctuary     Surface (1L-grab)
## 284 National Marine Sanctuary     Surface (1L-grab)
## 285 National Marine Sanctuary     Surface (1L-grab)
## 286 National Marine Sanctuary     Surface (1L-grab)
## 287 National Marine Sanctuary     Surface (1L-grab)
## 288           Lower South Bay     Surface (1L-grab)
## 289           Lower South Bay     Surface (1L-grab)
## 290           Lower South Bay     Surface (1L-grab)
## 291           Lower South Bay     Surface (1L-grab)
## 292 National Marine Sanctuary     Surface (1L-grab)
## 293 National Marine Sanctuary     Surface (1L-grab)
## 294 National Marine Sanctuary     Surface (1L-grab)
## 295 National Marine Sanctuary     Surface (1L-grab)
## 296 National Marine Sanctuary     Surface (1L-grab)
## 297 National Marine Sanctuary     Surface (1L-grab)
## 298 National Marine Sanctuary     Surface (1L-grab)
## 299 National Marine Sanctuary     Surface (1L-grab)
## 300 National Marine Sanctuary     Surface (1L-grab)
## 301 National Marine Sanctuary     Surface (1L-grab)
## 302 National Marine Sanctuary     Surface (1L-grab)
## 303                 South Bay     Surface (1L-grab)
## 304                 South Bay     Surface (1L-grab)
## 305                 South Bay     Surface (1L-grab)
## 306                 South Bay     Surface (1L-grab)
## 307                 South Bay     Surface (1L-grab)
## 308                 South Bay     Surface (1L-grab)
## 309                 South Bay     Surface (1L-grab)
## 310                   general     Surface (1L-grab)
## 311                   general     Surface (1L-grab)
## 312                   general     Surface (1L-grab)
## 313                   general     Surface (1L-grab)
## 314                   general     Surface (1L-grab)
## 315                   general     Surface (1L-grab)
##                                      locationMatrix proportion
## 1                                     general Storm  0.4675000
## 2                                     general Storm  0.4675000
## 3                                     general Storm  0.4675000
## 4                                     general Storm  0.4675000
## 5                                     general Storm  0.4675000
## 6                                     general Storm  0.4675000
## 7                                     general Storm  0.4675000
## 8                                     general Storm  0.4675000
## 9                                     general Storm  0.4675000
## 10                                    general Storm  0.4675000
## 11                                    general Storm  0.4675000
## 12                                    general Storm  0.4675000
## 13                                     general WWTP  0.2833333
## 14                                     general WWTP  0.2833333
## 15                                     general WWTP  0.2833333
## 16                                     general WWTP  0.2833333
## 17                                     general WWTP  0.2833333
## 18                                     general WWTP  0.2833333
## 19                                     general WWTP  0.2833333
## 20                                     general WWTP  0.2833333
## 21                                     general WWTP  0.2833333
## 22                                     general WWTP  0.2833333
## 23                                     general WWTP  0.2833333
## 24                                     general WWTP  0.2833333
## 25                                     general WWTP  0.2833333
## 26                                     general WWTP  0.2833333
## 27                                     general WWTP  0.2833333
## 28                                     general WWTP  0.2833333
## 29                                     general WWTP  0.2833333
## 30                             Lower South Bay Fish  0.1500000
## 31                             Lower South Bay Fish  0.1500000
## 32                             Lower South Bay Fish  0.1500000
## 33                             Lower South Bay Fish  0.1500000
## 34                             Lower South Bay Fish  0.1500000
## 35                             Lower South Bay Fish  0.1500000
## 36                             Lower South Bay Fish  0.1500000
## 37                             Lower South Bay Fish  0.1500000
## 38                             Lower South Bay Fish  0.1500000
## 39                             Lower South Bay Fish  0.1500000
## 40                             Lower South Bay Fish  0.1500000
## 41                             Lower South Bay Fish  0.1500000
## 42                             Lower South Bay Fish  0.1500000
## 43                             Lower South Bay Fish  0.1500000
## 44                                 Tomales Bay Fish  0.1300000
## 45                                 Tomales Bay Fish  0.1300000
## 46                                 Tomales Bay Fish  0.1300000
## 47                                 Tomales Bay Fish  0.1300000
## 48                                 Tomales Bay Fish  0.1300000
## 49                                 Tomales Bay Fish  0.1300000
## 50                                 Tomales Bay Fish  0.1300000
## 51                                 Tomales Bay Fish  0.1300000
## 52                                 Tomales Bay Fish  0.1300000
## 53                                 Tomales Bay Fish  0.1300000
## 54                                 Tomales Bay Fish  0.1300000
## 55                                 Tomales Bay Fish  0.1300000
## 56                                 Tomales Bay Fish  0.1300000
## 57                                 Tomales Bay Fish  0.1300000
## 58                                 Tomales Bay Fish  0.1300000
## 59                                 Tomales Bay Fish  0.1300000
## 60                                 Tomales Bay Fish  0.1300000
## 61                                 Tomales Bay Fish  0.1300000
## 62                                 Tomales Bay Fish  0.1300000
## 63                                 Tomales Bay Fish  0.1300000
## 64                                 Tomales Bay Fish  0.1300000
## 65                                 Tomales Bay Fish  0.1300000
## 66                                 Tomales Bay Fish  0.1300000
## 67                                 Tomales Bay Fish  0.1300000
## 68                                 Tomales Bay Fish  0.1300000
## 69                                 Tomales Bay Fish  0.1300000
## 70                                 Tomales Bay Fish  0.1300000
## 71                                 Tomales Bay Fish  0.1300000
## 72                                 Tomales Bay Fish  0.1300000
## 73                                 Tomales Bay Fish  0.1300000
## 74                                 Central Bay Fish  0.2100000
## 75                                 Central Bay Fish  0.2100000
## 76                                 Central Bay Fish  0.2100000
## 77                                 Central Bay Fish  0.2100000
## 78                                 Central Bay Fish  0.2100000
## 79                                 Central Bay Fish  0.2100000
## 80                                 Central Bay Fish  0.2100000
## 81                                 Central Bay Fish  0.2100000
## 82                                 Central Bay Fish  0.2100000
## 83                                 Central Bay Fish  0.2100000
## 84                                 Central Bay Fish  0.2100000
## 85                                 Central Bay Fish  0.2100000
## 86                                 Central Bay Fish  0.2100000
## 87                                 Central Bay Fish  0.2100000
## 88                                 Central Bay Fish  0.2100000
## 89                                 Central Bay Fish  0.2100000
## 90                                 Central Bay Fish  0.2100000
## 91                                 Central Bay Fish  0.2100000
## 92                                 Central Bay Fish  0.2100000
## 93                                 Central Bay Fish  0.2100000
## 94                                 Central Bay Fish  0.2100000
## 95                                 Central Bay Fish  0.2100000
## 96                                 Central Bay Fish  0.2100000
## 97                                 Central Bay Fish  0.2100000
## 98                                 Central Bay Fish  0.2100000
## 99                                 Central Bay Fish  0.2100000
## 100                                Central Bay Fish  0.2100000
## 101                                Central Bay Fish  0.2100000
## 102                                Central Bay Fish  0.2100000
## 103                                Central Bay Fish  0.2100000
## 104                                Central Bay Fish  0.2100000
## 105                                Central Bay Fish  0.2100000
## 106                                Central Bay Fish  0.2100000
## 107                                Central Bay Fish  0.2100000
## 108                                Central Bay Fish  0.2100000
## 109                                Central Bay Fish  0.2100000
## 110                                Central Bay Fish  0.2100000
## 111                                Central Bay Fish  0.2100000
## 112                                    general Fish  0.1775000
## 113                                    general Fish  0.1775000
## 114                                    general Fish  0.1775000
## 115                                    general Fish  0.1775000
## 116                                    general Fish  0.1775000
## 117                                    general Fish  0.1775000
## 118                                    general Fish  0.1775000
## 119                                    general Fish  0.1775000
## 120                                    general Fish  0.1775000
## 121                                    general Fish  0.1775000
## 122                                  South Bay Fish  0.2200000
## 123                                  South Bay Fish  0.2200000
## 124                                  South Bay Fish  0.2200000
## 125                                  South Bay Fish  0.2200000
## 126                                  South Bay Fish  0.2200000
## 127                                  South Bay Fish  0.2200000
## 128                                  South Bay Fish  0.2200000
## 129                                  South Bay Fish  0.2200000
## 130                                  South Bay Fish  0.2200000
## 131                                  South Bay Fish  0.2200000
## 132                                  South Bay Fish  0.2200000
## 133                                  South Bay Fish  0.2200000
## 134                                  South Bay Fish  0.2200000
## 135                                  South Bay Fish  0.2200000
## 136                                  South Bay Fish  0.2200000
## 137                                  South Bay Fish  0.2200000
## 138                                  South Bay Fish  0.2200000
## 139                                  South Bay Fish  0.2200000
## 140                                  South Bay Fish  0.2200000
## 141                                  South Bay Fish  0.2200000
## 142                                Central Bay Fish  0.2100000
## 143                                Central Bay Fish  0.2100000
## 144                                Central Bay Fish  0.2100000
## 145                                Central Bay Fish  0.2100000
## 146                                Central Bay Fish  0.2100000
## 147                                Central Bay Fish  0.2100000
## 148                                Central Bay Fish  0.2100000
## 149                                Central Bay Fish  0.2100000
## 150                                Central Bay Fish  0.2100000
## 151                                Central Bay Fish  0.2100000
## 152                                Central Bay Fish  0.2100000
## 153                                Central Bay Fish  0.2100000
## 154                                Central Bay Fish  0.2100000
## 155                                Central Bay Fish  0.2100000
## 156                                Central Bay Fish  0.2100000
## 157                                Central Bay Fish  0.2100000
## 158                                Central Bay Fish  0.2100000
## 159                                Central Bay Fish  0.2100000
## 160                                Central Bay Fish  0.2100000
## 161                                Central Bay Fish  0.2100000
## 162                                    general Fish  0.1775000
## 163                                    general Fish  0.1775000
## 164                                    general Fish  0.1775000
## 165                                    general Fish  0.1775000
## 166                                    general Fish  0.1775000
## 167                                    general Fish  0.1775000
## 168                                    general Fish  0.1775000
## 169                                    general Fish  0.1775000
## 170                                    general Fish  0.1775000
## 171                                    general Fish  0.1775000
## 172                                Tomales Bay Fish  0.1300000
## 173                                Tomales Bay Fish  0.1300000
## 174                                Tomales Bay Fish  0.1300000
## 175                                Tomales Bay Fish  0.1300000
## 176                                Tomales Bay Fish  0.1300000
## 177                                Tomales Bay Fish  0.1300000
## 178                                Tomales Bay Fish  0.1300000
## 179                                Tomales Bay Fish  0.1300000
## 180                                Tomales Bay Fish  0.1300000
## 181                                Tomales Bay Fish  0.1300000
## 182                                general Sediment  0.3800000
## 183                            Central Bay Sediment  0.4400000
## 184                            Central Bay Sediment  0.4400000
## 185                            Central Bay Sediment  0.4400000
## 186                            Central Bay Sediment  0.4400000
## 187                        Lower South Bay Sediment  0.5000000
## 188                        Lower South Bay Sediment  0.5000000
## 189                        Lower South Bay Sediment  0.5000000
## 190                                general Sediment  0.3800000
## 191                              South Bay Sediment  0.3900000
## 192                              South Bay Sediment  0.3900000
## 193                              South Bay Sediment  0.3900000
## 194                                general Sediment  0.3800000
## 195                                general Sediment  0.3800000
## 196                                general Sediment  0.3800000
## 197                                general Sediment  0.3800000
## 198                                general Sediment  0.3800000
## 199                                general Sediment  0.3800000
## 200                            Tomales Bay Sediment  0.1800000
## 201                            Tomales Bay Sediment  0.1800000
## 202               Central Bay Surface (Manta Trawl)  0.7321263
## 203               Central Bay Surface (Manta Trawl)  0.7321263
## 204               Central Bay Surface (Manta Trawl)  0.7321263
## 205               Central Bay Surface (Manta Trawl)  0.7321263
## 206               Central Bay Surface (Manta Trawl)  0.7321263
## 207               Central Bay Surface (Manta Trawl)  0.7321263
## 208               Central Bay Surface (Manta Trawl)  0.7321263
## 209               Central Bay Surface (Manta Trawl)  0.7321263
## 210               Central Bay Surface (Manta Trawl)  0.7321263
## 211               Central Bay Surface (Manta Trawl)  0.7321263
## 212               Central Bay Surface (Manta Trawl)  0.7321263
## 213               Central Bay Surface (Manta Trawl)  0.7321263
## 214               Central Bay Surface (Manta Trawl)  0.7321263
## 215 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 216 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 217 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 218 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 219 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 220 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 221 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 222 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 223 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 224 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 225 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 226 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 227 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 228 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 229           Lower South Bay Surface (Manta Trawl)  0.7321263
## 230           Lower South Bay Surface (Manta Trawl)  0.7321263
## 231           Lower South Bay Surface (Manta Trawl)  0.7321263
## 232           Lower South Bay Surface (Manta Trawl)  0.7321263
## 233           Lower South Bay Surface (Manta Trawl)  0.7321263
## 234           Lower South Bay Surface (Manta Trawl)  0.7321263
## 235 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 236 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 237 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 238 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 239 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 240 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 241 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 242 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 243 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 244 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 245                 South Bay Surface (Manta Trawl)  0.7321263
## 246                 South Bay Surface (Manta Trawl)  0.7321263
## 247                 South Bay Surface (Manta Trawl)  0.7321263
## 248                 South Bay Surface (Manta Trawl)  0.7321263
## 249                 South Bay Surface (Manta Trawl)  0.7321263
## 250                 South Bay Surface (Manta Trawl)  0.7321263
## 251                 South Bay Surface (Manta Trawl)  0.7321263
## 252                 South Bay Surface (Manta Trawl)  0.7321263
## 253                   general Surface (Manta Trawl)  0.7321263
## 254                   general Surface (Manta Trawl)  0.7321263
## 255                   general Surface (Manta Trawl)  0.7321263
## 256                   general Surface (Manta Trawl)  0.7321263
## 257                   general Surface (Manta Trawl)  0.7321263
## 258                   general Surface (Manta Trawl)  0.7321263
## 259                   general Surface (Manta Trawl)  0.7321263
## 260                   general Surface (Manta Trawl)  0.7321263
## 261                   general Surface (Manta Trawl)  0.7321263
## 262                   general Surface (Manta Trawl)  0.7321263
## 263                   general Surface (Manta Trawl)  0.7321263
## 264                   general Surface (Manta Trawl)  0.7321263
## 265                   general Surface (Manta Trawl)  0.7321263
## 266                   general Surface (Manta Trawl)  0.7321263
## 267                   Central Bay Surface (1L-grab)  0.6200000
## 268                   Central Bay Surface (1L-grab)  0.6200000
## 269                   Central Bay Surface (1L-grab)  0.6200000
## 270                   Central Bay Surface (1L-grab)  0.6200000
## 271                   Central Bay Surface (1L-grab)  0.6200000
## 272                   Central Bay Surface (1L-grab)  0.6200000
## 273                   Central Bay Surface (1L-grab)  0.6200000
## 274                   Central Bay Surface (1L-grab)  0.6200000
## 275                   Central Bay Surface (1L-grab)  0.6200000
## 276                   Central Bay Surface (1L-grab)  0.6200000
## 277                   Central Bay Surface (1L-grab)  0.6200000
## 278                   Central Bay Surface (1L-grab)  0.6200000
## 279     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 280     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 281     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 282     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 283     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 284     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 285     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 286     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 287     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 288               Lower South Bay Surface (1L-grab)  0.7200000
## 289               Lower South Bay Surface (1L-grab)  0.7200000
## 290               Lower South Bay Surface (1L-grab)  0.7200000
## 291               Lower South Bay Surface (1L-grab)  0.7200000
## 292     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 293     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 294     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 295     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 296     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 297     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 298     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 299     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 300     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 301     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 302     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 303                     South Bay Surface (1L-grab)  0.4500000
## 304                     South Bay Surface (1L-grab)  0.4500000
## 305                     South Bay Surface (1L-grab)  0.4500000
## 306                     South Bay Surface (1L-grab)  0.4500000
## 307                     South Bay Surface (1L-grab)  0.4500000
## 308                     South Bay Surface (1L-grab)  0.4500000
## 309                     South Bay Surface (1L-grab)  0.4500000
## 310                       general Surface (1L-grab)  0.4900000
## 311                       general Surface (1L-grab)  0.4900000
## 312                       general Surface (1L-grab)  0.4900000
## 313                       general Surface (1L-grab)  0.4900000
## 314                       general Surface (1L-grab)  0.4900000
## 315                       general Surface (1L-grab)  0.4900000
##     proportion.upper95 proportion.lower95 proportion.sd proportion.n
## 1                   NA                 NA            NA           NA
## 2                   NA                 NA            NA           NA
## 3                   NA                 NA            NA           NA
## 4                   NA                 NA            NA           NA
## 5                   NA                 NA            NA           NA
## 6                   NA                 NA            NA           NA
## 7                   NA                 NA            NA           NA
## 8                   NA                 NA            NA           NA
## 9                   NA                 NA            NA           NA
## 10                  NA                 NA            NA           NA
## 11                  NA                 NA            NA           NA
## 12                  NA                 NA            NA           NA
## 13                  NA                 NA            NA           NA
## 14                  NA                 NA            NA           NA
## 15                  NA                 NA            NA           NA
## 16                  NA                 NA            NA           NA
## 17                  NA                 NA            NA           NA
## 18                  NA                 NA            NA           NA
## 19                  NA                 NA            NA           NA
## 20                  NA                 NA            NA           NA
## 21                  NA                 NA            NA           NA
## 22                  NA                 NA            NA           NA
## 23                  NA                 NA            NA           NA
## 24                  NA                 NA            NA           NA
## 25                  NA                 NA            NA           NA
## 26                  NA                 NA            NA           NA
## 27                  NA                 NA            NA           NA
## 28                  NA                 NA            NA           NA
## 29                  NA                 NA            NA           NA
## 30                  NA                 NA            NA           NA
## 31                  NA                 NA            NA           NA
## 32                  NA                 NA            NA           NA
## 33                  NA                 NA            NA           NA
## 34                  NA                 NA            NA           NA
## 35                  NA                 NA            NA           NA
## 36                  NA                 NA            NA           NA
## 37                  NA                 NA            NA           NA
## 38                  NA                 NA            NA           NA
## 39                  NA                 NA            NA           NA
## 40                  NA                 NA            NA           NA
## 41                  NA                 NA            NA           NA
## 42                  NA                 NA            NA           NA
## 43                  NA                 NA            NA           NA
## 44                  NA                 NA            NA           NA
## 45                  NA                 NA            NA           NA
## 46                  NA                 NA            NA           NA
## 47                  NA                 NA            NA           NA
## 48                  NA                 NA            NA           NA
## 49                  NA                 NA            NA           NA
## 50                  NA                 NA            NA           NA
## 51                  NA                 NA            NA           NA
## 52                  NA                 NA            NA           NA
## 53                  NA                 NA            NA           NA
## 54                  NA                 NA            NA           NA
## 55                  NA                 NA            NA           NA
## 56                  NA                 NA            NA           NA
## 57                  NA                 NA            NA           NA
## 58                  NA                 NA            NA           NA
## 59                  NA                 NA            NA           NA
## 60                  NA                 NA            NA           NA
## 61                  NA                 NA            NA           NA
## 62                  NA                 NA            NA           NA
## 63                  NA                 NA            NA           NA
## 64                  NA                 NA            NA           NA
## 65                  NA                 NA            NA           NA
## 66                  NA                 NA            NA           NA
## 67                  NA                 NA            NA           NA
## 68                  NA                 NA            NA           NA
## 69                  NA                 NA            NA           NA
## 70                  NA                 NA            NA           NA
## 71                  NA                 NA            NA           NA
## 72                  NA                 NA            NA           NA
## 73                  NA                 NA            NA           NA
## 74                  NA                 NA            NA           NA
## 75                  NA                 NA            NA           NA
## 76                  NA                 NA            NA           NA
## 77                  NA                 NA            NA           NA
## 78                  NA                 NA            NA           NA
## 79                  NA                 NA            NA           NA
## 80                  NA                 NA            NA           NA
## 81                  NA                 NA            NA           NA
## 82                  NA                 NA            NA           NA
## 83                  NA                 NA            NA           NA
## 84                  NA                 NA            NA           NA
## 85                  NA                 NA            NA           NA
## 86                  NA                 NA            NA           NA
## 87                  NA                 NA            NA           NA
## 88                  NA                 NA            NA           NA
## 89                  NA                 NA            NA           NA
## 90                  NA                 NA            NA           NA
## 91                  NA                 NA            NA           NA
## 92                  NA                 NA            NA           NA
## 93                  NA                 NA            NA           NA
## 94                  NA                 NA            NA           NA
## 95                  NA                 NA            NA           NA
## 96                  NA                 NA            NA           NA
## 97                  NA                 NA            NA           NA
## 98                  NA                 NA            NA           NA
## 99                  NA                 NA            NA           NA
## 100                 NA                 NA            NA           NA
## 101                 NA                 NA            NA           NA
## 102                 NA                 NA            NA           NA
## 103                 NA                 NA            NA           NA
## 104                 NA                 NA            NA           NA
## 105                 NA                 NA            NA           NA
## 106                 NA                 NA            NA           NA
## 107                 NA                 NA            NA           NA
## 108                 NA                 NA            NA           NA
## 109                 NA                 NA            NA           NA
## 110                 NA                 NA            NA           NA
## 111                 NA                 NA            NA           NA
## 112                 NA                 NA            NA           NA
## 113                 NA                 NA            NA           NA
## 114                 NA                 NA            NA           NA
## 115                 NA                 NA            NA           NA
## 116                 NA                 NA            NA           NA
## 117                 NA                 NA            NA           NA
## 118                 NA                 NA            NA           NA
## 119                 NA                 NA            NA           NA
## 120                 NA                 NA            NA           NA
## 121                 NA                 NA            NA           NA
## 122                 NA                 NA            NA           NA
## 123                 NA                 NA            NA           NA
## 124                 NA                 NA            NA           NA
## 125                 NA                 NA            NA           NA
## 126                 NA                 NA            NA           NA
## 127                 NA                 NA            NA           NA
## 128                 NA                 NA            NA           NA
## 129                 NA                 NA            NA           NA
## 130                 NA                 NA            NA           NA
## 131                 NA                 NA            NA           NA
## 132                 NA                 NA            NA           NA
## 133                 NA                 NA            NA           NA
## 134                 NA                 NA            NA           NA
## 135                 NA                 NA            NA           NA
## 136                 NA                 NA            NA           NA
## 137                 NA                 NA            NA           NA
## 138                 NA                 NA            NA           NA
## 139                 NA                 NA            NA           NA
## 140                 NA                 NA            NA           NA
## 141                 NA                 NA            NA           NA
## 142                 NA                 NA            NA           NA
## 143                 NA                 NA            NA           NA
## 144                 NA                 NA            NA           NA
## 145                 NA                 NA            NA           NA
## 146                 NA                 NA            NA           NA
## 147                 NA                 NA            NA           NA
## 148                 NA                 NA            NA           NA
## 149                 NA                 NA            NA           NA
## 150                 NA                 NA            NA           NA
## 151                 NA                 NA            NA           NA
## 152                 NA                 NA            NA           NA
## 153                 NA                 NA            NA           NA
## 154                 NA                 NA            NA           NA
## 155                 NA                 NA            NA           NA
## 156                 NA                 NA            NA           NA
## 157                 NA                 NA            NA           NA
## 158                 NA                 NA            NA           NA
## 159                 NA                 NA            NA           NA
## 160                 NA                 NA            NA           NA
## 161                 NA                 NA            NA           NA
## 162                 NA                 NA            NA           NA
## 163                 NA                 NA            NA           NA
## 164                 NA                 NA            NA           NA
## 165                 NA                 NA            NA           NA
## 166                 NA                 NA            NA           NA
## 167                 NA                 NA            NA           NA
## 168                 NA                 NA            NA           NA
## 169                 NA                 NA            NA           NA
## 170                 NA                 NA            NA           NA
## 171                 NA                 NA            NA           NA
## 172                 NA                 NA            NA           NA
## 173                 NA                 NA            NA           NA
## 174                 NA                 NA            NA           NA
## 175                 NA                 NA            NA           NA
## 176                 NA                 NA            NA           NA
## 177                 NA                 NA            NA           NA
## 178                 NA                 NA            NA           NA
## 179                 NA                 NA            NA           NA
## 180                 NA                 NA            NA           NA
## 181                 NA                 NA            NA           NA
## 182                 NA                 NA            NA           NA
## 183                 NA                 NA            NA           NA
## 184                 NA                 NA            NA           NA
## 185                 NA                 NA            NA           NA
## 186                 NA                 NA            NA           NA
## 187                 NA                 NA            NA           NA
## 188                 NA                 NA            NA           NA
## 189                 NA                 NA            NA           NA
## 190                 NA                 NA            NA           NA
## 191                 NA                 NA            NA           NA
## 192                 NA                 NA            NA           NA
## 193                 NA                 NA            NA           NA
## 194                 NA                 NA            NA           NA
## 195                 NA                 NA            NA           NA
## 196                 NA                 NA            NA           NA
## 197                 NA                 NA            NA           NA
## 198                 NA                 NA            NA           NA
## 199                 NA                 NA            NA           NA
## 200                 NA                 NA            NA           NA
## 201                 NA                 NA            NA           NA
## 202          0.7929707          0.6712818      0.236417           58
## 203          0.7929707          0.6712818      0.236417           58
## 204          0.7929707          0.6712818      0.236417           58
## 205          0.7929707          0.6712818      0.236417           58
## 206          0.7929707          0.6712818      0.236417           58
## 207          0.7929707          0.6712818      0.236417           58
## 208          0.7929707          0.6712818      0.236417           58
## 209          0.7929707          0.6712818      0.236417           58
## 210          0.7929707          0.6712818      0.236417           58
## 211          0.7929707          0.6712818      0.236417           58
## 212          0.7929707          0.6712818      0.236417           58
## 213          0.7929707          0.6712818      0.236417           58
## 214          0.7929707          0.6712818      0.236417           58
## 215          0.7929707          0.6712818      0.236417           58
## 216          0.7929707          0.6712818      0.236417           58
## 217          0.7929707          0.6712818      0.236417           58
## 218          0.7929707          0.6712818      0.236417           58
## 219          0.7929707          0.6712818      0.236417           58
## 220          0.7929707          0.6712818      0.236417           58
## 221          0.7929707          0.6712818      0.236417           58
## 222          0.7929707          0.6712818      0.236417           58
## 223          0.7929707          0.6712818      0.236417           58
## 224          0.7929707          0.6712818      0.236417           58
## 225          0.7929707          0.6712818      0.236417           58
## 226          0.7929707          0.6712818      0.236417           58
## 227          0.7929707          0.6712818      0.236417           58
## 228          0.7929707          0.6712818      0.236417           58
## 229          0.7929707          0.6712818      0.236417           58
## 230          0.7929707          0.6712818      0.236417           58
## 231          0.7929707          0.6712818      0.236417           58
## 232          0.7929707          0.6712818      0.236417           58
## 233          0.7929707          0.6712818      0.236417           58
## 234          0.7929707          0.6712818      0.236417           58
## 235          0.7929707          0.6712818      0.236417           58
## 236          0.7929707          0.6712818      0.236417           58
## 237          0.7929707          0.6712818      0.236417           58
## 238          0.7929707          0.6712818      0.236417           58
## 239          0.7929707          0.6712818      0.236417           58
## 240          0.7929707          0.6712818      0.236417           58
## 241          0.7929707          0.6712818      0.236417           58
## 242          0.7929707          0.6712818      0.236417           58
## 243          0.7929707          0.6712818      0.236417           58
## 244          0.7929707          0.6712818      0.236417           58
## 245          0.7929707          0.6712818      0.236417           58
## 246          0.7929707          0.6712818      0.236417           58
## 247          0.7929707          0.6712818      0.236417           58
## 248          0.7929707          0.6712818      0.236417           58
## 249          0.7929707          0.6712818      0.236417           58
## 250          0.7929707          0.6712818      0.236417           58
## 251          0.7929707          0.6712818      0.236417           58
## 252          0.7929707          0.6712818      0.236417           58
## 253          0.7929707          0.6712818      0.236417           58
## 254          0.7929707          0.6712818      0.236417           58
## 255          0.7929707          0.6712818      0.236417           58
## 256          0.7929707          0.6712818      0.236417           58
## 257          0.7929707          0.6712818      0.236417           58
## 258          0.7929707          0.6712818      0.236417           58
## 259          0.7929707          0.6712818      0.236417           58
## 260          0.7929707          0.6712818      0.236417           58
## 261          0.7929707          0.6712818      0.236417           58
## 262          0.7929707          0.6712818      0.236417           58
## 263          0.7929707          0.6712818      0.236417           58
## 264          0.7929707          0.6712818      0.236417           58
## 265          0.7929707          0.6712818      0.236417           58
## 266          0.7929707          0.6712818      0.236417           58
## 267                 NA                 NA            NA           NA
## 268                 NA                 NA            NA           NA
## 269                 NA                 NA            NA           NA
## 270                 NA                 NA            NA           NA
## 271                 NA                 NA            NA           NA
## 272                 NA                 NA            NA           NA
## 273                 NA                 NA            NA           NA
## 274                 NA                 NA            NA           NA
## 275                 NA                 NA            NA           NA
## 276                 NA                 NA            NA           NA
## 277                 NA                 NA            NA           NA
## 278                 NA                 NA            NA           NA
## 279                 NA                 NA            NA           NA
## 280                 NA                 NA            NA           NA
## 281                 NA                 NA            NA           NA
## 282                 NA                 NA            NA           NA
## 283                 NA                 NA            NA           NA
## 284                 NA                 NA            NA           NA
## 285                 NA                 NA            NA           NA
## 286                 NA                 NA            NA           NA
## 287                 NA                 NA            NA           NA
## 288                 NA                 NA            NA           NA
## 289                 NA                 NA            NA           NA
## 290                 NA                 NA            NA           NA
## 291                 NA                 NA            NA           NA
## 292                 NA                 NA            NA           NA
## 293                 NA                 NA            NA           NA
## 294                 NA                 NA            NA           NA
## 295                 NA                 NA            NA           NA
## 296                 NA                 NA            NA           NA
## 297                 NA                 NA            NA           NA
## 298                 NA                 NA            NA           NA
## 299                 NA                 NA            NA           NA
## 300                 NA                 NA            NA           NA
## 301                 NA                 NA            NA           NA
## 302                 NA                 NA            NA           NA
## 303                 NA                 NA            NA           NA
## 304                 NA                 NA            NA           NA
## 305                 NA                 NA            NA           NA
## 306                 NA                 NA            NA           NA
## 307                 NA                 NA            NA           NA
## 308                 NA                 NA            NA           NA
## 309                 NA                 NA            NA           NA
## 310                 NA                 NA            NA           NA
## 311                 NA                 NA            NA           NA
## 312                 NA                 NA            NA           NA
## 313                 NA                 NA            NA           NA
## 314                 NA                 NA            NA           NA
## 315                 NA                 NA            NA           NA

Cleanup and apply general correction factors when site-specific data were unavailable

sfBay3 <- sfBay2_joined %>% 
  mutate(particles.L.blank.corrected.particle.corrected = particles.L.blank.corrected * proportion,
         particles.fish.blank.corrected.particle.corrected = particles.fish.blank.corrected * proportion,
         particles.kg.blank.corrected.particle.corrected = particles.kg.blank.corrected * proportion,
         # CI's
         particles.L.blank.corrected.particle.corrected.upper95 = particles.L.blank.corrected * proportion.upper95,
         particles.L.blank.corrected.particle.corrected.lower95 = particles.L.blank.corrected * proportion.lower95,
         particles.L.blank.corrected.particle.corrected.sd = particles.L.blank.corrected * proportion.sd) %>% 
#### Include fiber correction
  mutate(particles.L.blank.corrected.particle.corrected.fiber.corrected = particles.L.blank.corrected.particle.corrected * fiber.correction)

sfBay3
##                                              sampleID
## 1                                  17-POC-438-125&355
## 2                                  17-POC-259-125&355
## 3                       20180406MMPStormSBCCMP125&355
## 4                                  17-POC-283-125&355
## 5                                  17-POC-515-125&355
## 6                                  17-POC-100-125&355
## 7                                  17-POC-130-125&355
## 8                                    17GR-003-125&355
## 9                       20180108MMPStormSBSMMP125&355
## 10                      20180108MMPStormCBMeek125&355
## 11                     20180108MMPStormCBEmery125&355
## 12                                 19-POC-198-125&355
## 13                                   EBDA Aug 31 2017
## 14                                  EBDA Sept 26 2017
## 15                                  EBMUD Aug 22 2017
## 16                                 EBMUD Sept 26 2017
## 17                                      PA Aug 1 2017
## 18                                  PA July 20 2017 A
## 19                                     SJ Aug 10 2017
## 20                                    SJ Sept 19 2017
## 21                                  SUNN Sept 19 2017
## 22                                  CCCSD Sept 7 2017
## 23                                   FSSD Aug 23 2017
## 24                                   FSSD Sept 7 2017
## 25                                  EBMUD Oct 20 2017
## 26                                   SFPUC Nov 6 2017
## 27                                   SFPUC Nov 7 2017
## 28                                   SUNN Oct 17 2017
## 29                                   CCCSD Dec 6 2017
## 30                                         AN LSB06_1
## 31                                         AN LSB06_2
## 32                                         AN LSB06_4
## 33                                         TS LSB06_1
## 34                                         TS LSB06_2
## 35                                         TS LSB06_3
## 36                                         TS LSB06_4
## 37                                         AN LSB06_3
## 38                                         TS LSB06_5
## 39                                         TS LSB06_6
## 40                                         TS LSB06_7
## 41                                         TS LSB06_8
## 42                                         TS LSB06_9
## 43                                        TS LSB06_10
## 44                                         AN TB101_1
## 45                                         AN TB101_2
## 46                                         AN TB101_3
## 47                                         AN TB101_4
## 48                                         AN TB101_5
## 49                                         AN TB101_6
## 50                                         AN TB101_7
## 51                                         AN TB101_8
## 52                                         AN TB101_9
## 53                                        AN TB101_10
## 54                                         AN TB102_1
## 55                                         AN TB102_2
## 56                                         AN TB102_3
## 57                                         AN TB102_4
## 58                                         AN TB102_5
## 59                                         AN TB102_6
## 60                                         AN TB102_7
## 61                                         AN TB102_8
## 62                                         AN TB102_9
## 63                                        AN TB102_10
## 64                                         TS TB101_1
## 65                                         TS TB101_2
## 66                                         TS TB101_3
## 67                                         TS TB101_4
## 68                                         TS TB101_5
## 69                                         TS TB101_6
## 70                                         TS TB101_7
## 71                                         TS TB101_8
## 72                                         TS TB101_9
## 73                                        TS TB101_10
## 74                                         TS CB106_1
## 75                                         TS CB106_2
## 76                                         TS CB106_3
## 77                                         TS CB106_4
## 78                                         TS CB106_5
## 79                                         TS CB106_6
## 80                                         TS CB106_7
## 81                                         TS CB106_8
## 82                                         TS CB106_9
## 83                                        TS CB106_10
## 84                                         AN CB106_1
## 85                                         AN CB106_2
## 86                                         AN CB106_3
## 87                                         AN CB106_4
## 88                                         AN CB106_5
## 89                                         AN CB106_6
## 90                                         AN CB106_7
## 91                                         AN CB106_8
## 92                                         AN CB106_9
## 93                                        AN CB106_10
## 94                                         AN CB010_1
## 95                                         AN CB010_2
## 96                                         AN CB010_4
## 97                                         AN CB010_3
## 98                                         AN CB010_5
## 99                                         AN CB010_6
## 100                                        AN CB010_7
## 101                                        AN CB010_8
## 102                                        AN CB010_9
## 103                                       AN CB010_10
## 104                                        TS CB010_1
## 105                                        TS CB010_2
## 106                                        TS CB010_3
## 107                                        TS CB010_4
## 108                                        TS CB010_5
## 109                                        TS CB010_6
## 110                                        TS CB010_7
## 111                                        TS CB010_8
## 112                                       AN SOSL40_1
## 113                                       AN SOSL40_2
## 114                                       AN SOSL40_3
## 115                                       AN SOSL40_4
## 116                                       AN SOSL40_5
## 117                                       AN SOSL40_6
## 118                                       AN SOSL40_7
## 119                                       AN SOSL40_8
## 120                                       AN SOSL40_9
## 121                                      AN SOSL40_10
## 122                                        AN SB074_1
## 123                                        AN SB074_2
## 124                                        AN SB074_3
## 125                                        AN SB074_4
## 126                                        AN SB074_5
## 127                                        AN SB074_6
## 128                                        AN SB074_7
## 129                                        AN SB074_8
## 130                                        AN SB074_9
## 131                                       AN SB074_10
## 132                                        TS SB074_1
## 133                                        TS SB074_2
## 134                                        TS SB074_3
## 135                                        TS SB074_4
## 136                                        TS SB074_5
## 137                                        TS SB074_6
## 138                                        TS SB074_7
## 139                                        TS SB074_8
## 140                                        TS SB074_9
## 141                                       TS SB074_10
## 142                                        AN CB037_1
## 143                                        AN CB037_2
## 144                                        AN CB037_3
## 145                                        AN CB037_4
## 146                                        AN CB037_5
## 147                                        AN CB037_6
## 148                                        AN CB037_7
## 149                                        AN CB037_8
## 150                                        AN CB037_9
## 151                                       AN CB037_10
## 152                                        TS CB037_1
## 153                                        TS CB037_2
## 154                                        TS CB037_3
## 155                                        TS CB037_4
## 156                                        TS CB037_5
## 157                                        TS CB037_6
## 158                                        TS CB037_7
## 159                                        TS CB037_8
## 160                                        TS CB037_9
## 161                                       TS CB037_10
## 162                                       TS SOSL40_1
## 163                                       TS SOSL40_2
## 164                                       TS SOSL40_3
## 165                                       TS SOSL40_4
## 166                                       TS SOSL40_5
## 167                                       TS SOSL40_6
## 168                                       TS SOSL40_7
## 169                                       TS SOSL40_8
## 170                                       TS SOSL40_9
## 171                                      TS SOSL40_10
## 172                                        TS TB102_1
## 173                                        TS TB102_2
## 174                                        TS TB102_3
## 175                                        TS TB102_4
## 176                                        TS TB102_5
## 177                                        TS TB102_6
## 178                                        TS TB102_7
## 179                                        TS TB102_8
## 180                                        TS TB102_9
## 181                                       TS TB102_10
## 182                                     RMP_14SC_1153
## 183                               15RMPMC_CB10_MP1
## 184                                  15RMPMC-CB15-MP1
## 185                                  15RMPMC_CB32_MP1
## 186                                15RMPC_CB37_MP1
## 187                                17MMP_S_LSB02_MP_1
## 188                                17MMP_S_LSB04_MP_1
## 189                                  17MMP-S-LSB06-MP
## 190                                  15RMP_14SC_1270 
## 191                                17MMP_S_SB051_MP_1
## 192                                  17MMP_SB056_MP_1
## 193                                17MMP_S_SB074_MP_1
## 194                               17MMP_S_SOSL16_MP_1
## 195                                17MMP_S_SOSL40_MP1
## 196                                 17MMP-S-SPB128-MP
## 197                                 17MMP_S_SPB15_MP1
## 198                                  17MMP-S-SUB52-MP
## 199                                  17MMP_S_SUB53_MP
## 200                                  17MMP_S_TB101_MP
## 201                                  17MMP_S_TB102_MP
## 202                                        CB4 Aug 21
## 203                           CB4 Richmond Bdg Nov 16
## 204                                        CB5 Aug 22
## 205                                        CB5 Nov 16
## 206                                         CB5 Nov 5
## 207                                        CB6 Aug 22
## 208                                        CB6 Nov 16
## 209                                    CB7 Aug 22 DUP
## 210                             CB7 Bay Bridge Nov 16
## 211                                        CB8 Aug 25
## 212                                        CB8 Jan 11
## 213                                        CB9 Aug 22
## 214                                  CB9 Jan 11 Total
## 215                                    CBNMS22 Mar 30
## 216                                   CBNMS22 Sept 12
## 217                                    CBNMS23 Mar 29
## 218                                   CBNMS23 Sept 12
## 219                                   CBNMS24 Sept 13
## 220                                    GFNMS24 Mar 29
## 221                                    GFNMS25 Mar 30
## 222                                   GFNMS25 Sept 11
## 223                                    GFNMS26 Mar 29
## 224                                   GFNMS26 Sept 12
## 225                                  GFNMS27 March 29
## 226                                   GFNMS27 Sept 13
## 227                                    GFNMS28 Mar 30
## 228                               GFNMS28 DUP Sept 13
## 229                                      LSB14 Aug 24
## 230                                       LSB14 Mar 6
## 231                                      LSB15 Aug 24
## 232                                       LSB15 Mar 6
## 233                                      LSB16 Aug 24
## 234                                       LSB16 Mar 6
## 235                               MBNMS29 Jan 11 2018
## 236                                    MBNMS29 Mar 30
## 237                               MBNMS29 Nov 17 2017
## 238                                   MBNMS29 Sept 13
## 239                                    MBNMS30 Mar 31
## 240                                   MBNMS30 Sept 27
## 241                                    MBNMS31 Mar 31
## 242                                   MBNMS31 Sept 27
## 243                                    MBNMS32 Mar 31
## 244                                   MBNMS32 Sept 27
## 245                                       SB10 Aug 23
## 246                                       SB10 Mar 19
## 247                                       SB11 Aug 23
## 248                                       SB11 Mar 19
## 249                                       SB12 Aug 23
## 250                                       SB12 Mar 19
## 251                                       SB13 Aug 23
## 252                                       SB13 Mar 19
## 253                    SF Bay Treasure Island Sept 18
## 254                    SF Bay Treasure Island Sept 18
## 255                                  SPB2 Aug 21 2017
## 256                                  SPB2 Aug 21 2017
## 257                                       SPB2 Nov 16
## 258                                       SPB2 Nov 16
## 259                                       SPB3 Aug 21
## 260                                       SPB3 Aug 21
## 261                                       SPB3 Nov 17
## 262                                       SPB3 Nov 17
## 263                                       SUB1 Aug 21
## 264                                       SUB1 Aug 21
## 265                                       SUB1 Nov 17
## 266                                       SUB1 Nov 17
## 267                                   CB4 Aug 21 grab
## 268                                   CB4 Nov 22 grab
## 269                                   CB5 Aug 22 grab
## 270                                   CB5 Nov 22 grab
## 271                                   CB6 Aug 22 grab
## 272                                   CB6 Nov 22 grab
## 273                                   CB7 Aug 22 grab
## 274                                   CB7 Nov 22 grab
## 275                                   CB8 Aug 22 grab
## 276                                   CB8 Jan 11 grab
## 277                                   CB9 Aug 22 grab
## 278                                   CB9 Jan 22 grab
## 279                              CBNMS22 Sept 12 grab
## 280                               CBNMS23 Sep 22 grab
## 281                               CBNMS24 Sep 22 grab
## 282                         GFNMS/MBNMS29 Jan 22 grab
## 283                               GFNMS25 Mar 22 grab
## 284                              GFNMS25 Sept 11 grab
## 285                              GFNMS26 Sept 12 grab
## 286                               GFNMS27 Sep 22 grab
## 287               GFNMS28 (DUP for Manta) Sep 22 grab
## 288                                 LSB14 Mar 22 grab
## 289 LSB15 (corrected from LSB14 to LSB15) Mar 22 grab
## 290                                 LSB16 Aug 22 grab
## 291                                 LSB16 Mar 22 grab
## 292           MBNMS26 (GFNMS26 on bottle) Mar 22 grab
## 293                    MBNMS28 (GFNMS28?) Mar 22 grab
## 294                               MBNMS29 Mar 30 grab
## 295                               MBNMS29 Nov 22 grab
## 296                              MBNMS29 Sept 13 grab
## 297            MBNMS30 Mar 30 (Mar 31 for Manta) grab
## 298                               MBNMS30 Sep 22 grab
## 299                               MBNMS31 Mar 22 grab
## 300                               MBNMS31 Sep 22 grab
## 301                               MBNMS32 Mar 22 grab
## 302                               MBNMS32 Sep 22 grab
## 303                                  SB10 Aug 22 grab
## 304                                  SB10 Mar 22 grab
## 305                                  SB11 Aug 22 grab
## 306                                  SB11 Mar 22 grab
## 307                                  SB12 Mar 19 grab
## 308                                  SB13 Aug 23 grab
## 309                                  SB13 Mar 22 grab
## 310                             SPB2 Aug 21 2017 grab
## 311                                  SPB2 Nov 16 grab
## 312                                  SPB3 Aug 22 grab
## 313                                  SPB3 Nov 22 grab
## 314                                  SUB1 Aug 22 grab
## 315                                  SUB1 Nov 22 grab
##                            specific.location  System          general.location
## 1   Rodeo Creek at Seacliff Ct Pedestrian Br Estuary                      <NA>
## 2               Refugio Creek at Tsushima St Estuary                      <NA>
## 3                               Coyote Creek Estuary                      <NA>
## 4                 Colma Ck at S. Linden Blvd Estuary                      <NA>
## 5              Line 12K at Coliseum Entrance Estuary                      <NA>
## 6                Line 12F below PG&E station Estuary                      <NA>
## 7                   Line 12J at mouth to 12K Estuary                      <NA>
## 8             Guadalupe River at Highway 101 Estuary                      <NA>
## 9                            San Mateo Creek Estuary                      <NA>
## 10             Meeker Slough at Regatta Blvd Estuary                      <NA>
## 11                        MMP-Storm-CB-Emery Estuary                      <NA>
## 12                                  12M Rep1 Estuary                      <NA>
## 13                                      <NA> Estuary                      <NA>
## 14                                      <NA> Estuary                      <NA>
## 15                                      <NA> Estuary                      <NA>
## 16                                      <NA> Estuary                      <NA>
## 17                                      <NA> Estuary                      <NA>
## 18                                      <NA> Estuary                      <NA>
## 19                                      <NA> Estuary                      <NA>
## 20                                      <NA> Estuary                      <NA>
## 21                                      <NA> Estuary                      <NA>
## 22                                      <NA> Estuary                      <NA>
## 23                                      <NA> Estuary                      <NA>
## 24                                      <NA> Estuary                      <NA>
## 25                                      <NA> Estuary                      <NA>
## 26                                      <NA> Estuary                      <NA>
## 27                                      <NA> Estuary                      <NA>
## 28                                      <NA> Estuary                      <NA>
## 29                                      <NA> Estuary                      <NA>
## 30                                      <NA> Estuary           Lower South Bay
## 31                                      <NA> Estuary           Lower South Bay
## 32                                      <NA> Estuary           Lower South Bay
## 33                                      <NA> Estuary           Lower South Bay
## 34                                      <NA> Estuary           Lower South Bay
## 35                                      <NA> Estuary           Lower South Bay
## 36                                      <NA> Estuary           Lower South Bay
## 37                                      <NA> Estuary           Lower South Bay
## 38                                      <NA> Estuary           Lower South Bay
## 39                                      <NA> Estuary           Lower South Bay
## 40                                      <NA> Estuary           Lower South Bay
## 41                                      <NA> Estuary           Lower South Bay
## 42                                      <NA> Estuary           Lower South Bay
## 43                                      <NA> Estuary           Lower South Bay
## 44                                      <NA> Estuary               Tomales Bay
## 45                                      <NA> Estuary               Tomales Bay
## 46                                      <NA> Estuary               Tomales Bay
## 47                                      <NA> Estuary               Tomales Bay
## 48                                      <NA> Estuary               Tomales Bay
## 49                                      <NA> Estuary               Tomales Bay
## 50                                      <NA> Estuary               Tomales Bay
## 51                                      <NA> Estuary               Tomales Bay
## 52                                      <NA> Estuary               Tomales Bay
## 53                                      <NA> Estuary               Tomales Bay
## 54                                      <NA> Estuary               Tomales Bay
## 55                                      <NA> Estuary               Tomales Bay
## 56                                      <NA> Estuary               Tomales Bay
## 57                                      <NA> Estuary               Tomales Bay
## 58                                      <NA> Estuary               Tomales Bay
## 59                                      <NA> Estuary               Tomales Bay
## 60                                      <NA> Estuary               Tomales Bay
## 61                                      <NA> Estuary               Tomales Bay
## 62                                      <NA> Estuary               Tomales Bay
## 63                                      <NA> Estuary               Tomales Bay
## 64                                      <NA> Estuary               Tomales Bay
## 65                                      <NA> Estuary               Tomales Bay
## 66                                      <NA> Estuary               Tomales Bay
## 67                                      <NA> Estuary               Tomales Bay
## 68                                      <NA> Estuary               Tomales Bay
## 69                                      <NA> Estuary               Tomales Bay
## 70                                      <NA> Estuary               Tomales Bay
## 71                                      <NA> Estuary               Tomales Bay
## 72                                      <NA> Estuary               Tomales Bay
## 73                                      <NA> Estuary               Tomales Bay
## 74                                      <NA> Estuary               Central Bay
## 75                                      <NA> Estuary               Central Bay
## 76                                      <NA> Estuary               Central Bay
## 77                                      <NA> Estuary               Central Bay
## 78                                      <NA> Estuary               Central Bay
## 79                                      <NA> Estuary               Central Bay
## 80                                      <NA> Estuary               Central Bay
## 81                                      <NA> Estuary               Central Bay
## 82                                      <NA> Estuary               Central Bay
## 83                                      <NA> Estuary               Central Bay
## 84                                      <NA> Estuary               Central Bay
## 85                                      <NA> Estuary               Central Bay
## 86                                      <NA> Estuary               Central Bay
## 87                                      <NA> Estuary               Central Bay
## 88                                      <NA> Estuary               Central Bay
## 89                                      <NA> Estuary               Central Bay
## 90                                      <NA> Estuary               Central Bay
## 91                                      <NA> Estuary               Central Bay
## 92                                      <NA> Estuary               Central Bay
## 93                                      <NA> Estuary               Central Bay
## 94                                      <NA> Estuary               Central Bay
## 95                                      <NA> Estuary               Central Bay
## 96                                      <NA> Estuary               Central Bay
## 97                                      <NA> Estuary               Central Bay
## 98                                      <NA> Estuary               Central Bay
## 99                                      <NA> Estuary               Central Bay
## 100                                     <NA> Estuary               Central Bay
## 101                                     <NA> Estuary               Central Bay
## 102                                     <NA> Estuary               Central Bay
## 103                                     <NA> Estuary               Central Bay
## 104                                     <NA> Estuary               Central Bay
## 105                                     <NA> Estuary               Central Bay
## 106                                     <NA> Estuary               Central Bay
## 107                                     <NA> Estuary               Central Bay
## 108                                     <NA> Estuary               Central Bay
## 109                                     <NA> Estuary               Central Bay
## 110                                     <NA> Estuary               Central Bay
## 111                                     <NA> Estuary               Central Bay
## 112                                     <NA> Estuary                      <NA>
## 113                                     <NA> Estuary                      <NA>
## 114                                     <NA> Estuary                      <NA>
## 115                                     <NA> Estuary                      <NA>
## 116                                     <NA> Estuary                      <NA>
## 117                                     <NA> Estuary                      <NA>
## 118                                     <NA> Estuary                      <NA>
## 119                                     <NA> Estuary                      <NA>
## 120                                     <NA> Estuary                      <NA>
## 121                                     <NA> Estuary                      <NA>
## 122                                     <NA> Estuary                 South Bay
## 123                                     <NA> Estuary                 South Bay
## 124                                     <NA> Estuary                 South Bay
## 125                                     <NA> Estuary                 South Bay
## 126                                     <NA> Estuary                 South Bay
## 127                                     <NA> Estuary                 South Bay
## 128                                     <NA> Estuary                 South Bay
## 129                                     <NA> Estuary                 South Bay
## 130                                     <NA> Estuary                 South Bay
## 131                                     <NA> Estuary                 South Bay
## 132                                     <NA> Estuary                 South Bay
## 133                                     <NA> Estuary                 South Bay
## 134                                     <NA> Estuary                 South Bay
## 135                                     <NA> Estuary                 South Bay
## 136                                     <NA> Estuary                 South Bay
## 137                                     <NA> Estuary                 South Bay
## 138                                     <NA> Estuary                 South Bay
## 139                                     <NA> Estuary                 South Bay
## 140                                     <NA> Estuary                 South Bay
## 141                                     <NA> Estuary                 South Bay
## 142                                     <NA> Estuary               Central Bay
## 143                                     <NA> Estuary               Central Bay
## 144                                     <NA> Estuary               Central Bay
## 145                                     <NA> Estuary               Central Bay
## 146                                     <NA> Estuary               Central Bay
## 147                                     <NA> Estuary               Central Bay
## 148                                     <NA> Estuary               Central Bay
## 149                                     <NA> Estuary               Central Bay
## 150                                     <NA> Estuary               Central Bay
## 151                                     <NA> Estuary               Central Bay
## 152                                     <NA> Estuary               Central Bay
## 153                                     <NA> Estuary               Central Bay
## 154                                     <NA> Estuary               Central Bay
## 155                                     <NA> Estuary               Central Bay
## 156                                     <NA> Estuary               Central Bay
## 157                                     <NA> Estuary               Central Bay
## 158                                     <NA> Estuary               Central Bay
## 159                                     <NA> Estuary               Central Bay
## 160                                     <NA> Estuary               Central Bay
## 161                                     <NA> Estuary               Central Bay
## 162                                     <NA> Estuary                      SOSL
## 163                                     <NA> Estuary                      SOSL
## 164                                     <NA> Estuary                      SOSL
## 165                                     <NA> Estuary                      SOSL
## 166                                     <NA> Estuary                      SOSL
## 167                                     <NA> Estuary                      SOSL
## 168                                     <NA> Estuary                      SOSL
## 169                                     <NA> Estuary                      SOSL
## 170                                     <NA> Estuary                      SOSL
## 171                                     <NA> Estuary                      SOSL
## 172                                     <NA> Estuary               Tomales Bay
## 173                                     <NA> Estuary               Tomales Bay
## 174                                     <NA> Estuary               Tomales Bay
## 175                                     <NA> Estuary               Tomales Bay
## 176                                     <NA> Estuary               Tomales Bay
## 177                                     <NA> Estuary               Tomales Bay
## 178                                     <NA> Estuary               Tomales Bay
## 179                                     <NA> Estuary               Tomales Bay
## 180                                     <NA> Estuary               Tomales Bay
## 181                                     <NA> Estuary               Tomales Bay
## 182                                     <NA> Estuary                        SC
## 183                                     <NA> Estuary               Central Bay
## 184                                     <NA> Estuary               Central Bay
## 185                                     <NA> Estuary               Central Bay
## 186                                     <NA> Estuary               Central Bay
## 187                                     <NA> Estuary           Lower South Bay
## 188                                     <NA> Estuary           Lower South Bay
## 189                                     <NA> Estuary           Lower South Bay
## 190                                     <NA> Estuary                        SC
## 191                                     <NA> Estuary                 South Bay
## 192                                     <NA> Estuary                 South Bay
## 193                                     <NA> Estuary                 South Bay
## 194                                     <NA> Estuary                      SOSL
## 195                                     <NA> Estuary                      SOSL
## 196                                     <NA> Estuary                       SPB
## 197                                     <NA> Estuary                       SPB
## 198                                     <NA> Estuary                       SUB
## 199                                     <NA> Estuary                       SUB
## 200                                     <NA> Estuary               Tomales Bay
## 201                                     <NA> Estuary               Tomales Bay
## 202                                     <NA> Estuary               Central Bay
## 203                                     <NA> Estuary               Central Bay
## 204                                     <NA> Estuary               Central Bay
## 205                                     <NA> Estuary               Central Bay
## 206                                     <NA> Estuary               Central Bay
## 207                                     <NA> Estuary               Central Bay
## 208                                     <NA> Estuary               Central Bay
## 209                                     <NA> Estuary               Central Bay
## 210                                     <NA> Estuary               Central Bay
## 211                                     <NA> Estuary               Central Bay
## 212                                     <NA> Estuary               Central Bay
## 213                                     <NA> Estuary               Central Bay
## 214                                     <NA> Estuary               Central Bay
## 215                                     <NA> Estuary National Marine Sancturay
## 216                                     <NA> Estuary National Marine Sancturay
## 217                                     <NA> Estuary National Marine Sancturay
## 218                                     <NA> Estuary National Marine Sancturay
## 219                                     <NA> Estuary National Marine Sancturay
## 220                                     <NA> Estuary National Marine Sancturay
## 221                                     <NA> Estuary National Marine Sancturay
## 222                                     <NA> Estuary National Marine Sancturay
## 223                                     <NA> Estuary National Marine Sancturay
## 224                                     <NA> Estuary National Marine Sancturay
## 225                                     <NA> Estuary National Marine Sancturay
## 226                                     <NA> Estuary National Marine Sancturay
## 227                                     <NA> Estuary National Marine Sancturay
## 228                                     <NA> Estuary National Marine Sancturay
## 229                                     <NA> Estuary           Lower South Bay
## 230                                     <NA> Estuary           Lower South Bay
## 231                                     <NA> Estuary           Lower South Bay
## 232                                     <NA> Estuary           Lower South Bay
## 233                                     <NA> Estuary           Lower South Bay
## 234                                     <NA> Estuary           Lower South Bay
## 235                                     <NA> Estuary National Marine Sancturay
## 236                                     <NA> Estuary National Marine Sancturay
## 237                                     <NA> Estuary National Marine Sancturay
## 238                                     <NA> Estuary National Marine Sancturay
## 239                                     <NA> Estuary National Marine Sancturay
## 240                                     <NA> Estuary National Marine Sancturay
## 241                                     <NA> Estuary National Marine Sancturay
## 242                                     <NA> Estuary National Marine Sancturay
## 243                                     <NA> Estuary National Marine Sancturay
## 244                                     <NA> Estuary National Marine Sancturay
## 245                                     <NA> Estuary                 South Bay
## 246                                     <NA> Estuary                 South Bay
## 247                                     <NA> Estuary                 South Bay
## 248                                     <NA> Estuary                 South Bay
## 249                                     <NA> Estuary                 South Bay
## 250                                     <NA> Estuary                 South Bay
## 251                                     <NA> Estuary                 South Bay
## 252                                     <NA> Estuary                 South Bay
## 253                                     <NA> Estuary           Treasure Island
## 254                                     <NA> Estuary           Treasure Island
## 255                                     <NA> Estuary                       SPB
## 256                                     <NA> Estuary                       SPB
## 257                                     <NA> Estuary                       SPB
## 258                                     <NA> Estuary                       SPB
## 259                                     <NA> Estuary                       SPB
## 260                                     <NA> Estuary                       SPB
## 261                                     <NA> Estuary                       SPB
## 262                                     <NA> Estuary                       SPB
## 263                                     <NA> Estuary                       SUB
## 264                                     <NA> Estuary                       SUB
## 265                                     <NA> Estuary                       SUB
## 266                                     <NA> Estuary                       SUB
## 267                                     <NA> Estuary               Central Bay
## 268                                     <NA> Estuary               Central Bay
## 269                                     <NA> Estuary               Central Bay
## 270                                     <NA> Estuary               Central Bay
## 271                                     <NA> Estuary               Central Bay
## 272                                     <NA> Estuary               Central Bay
## 273                                     <NA> Estuary               Central Bay
## 274                                     <NA> Estuary               Central Bay
## 275                                     <NA> Estuary               Central Bay
## 276                                     <NA> Estuary               Central Bay
## 277                                     <NA> Estuary               Central Bay
## 278                                     <NA> Estuary               Central Bay
## 279                                     <NA> Estuary National Marine Sancturay
## 280                                     <NA> Estuary National Marine Sancturay
## 281                                     <NA> Estuary National Marine Sancturay
## 282                                     <NA> Estuary National Marine Sancturay
## 283                                     <NA> Estuary National Marine Sancturay
## 284                                     <NA> Estuary National Marine Sancturay
## 285                                     <NA> Estuary National Marine Sancturay
## 286                                     <NA> Estuary National Marine Sancturay
## 287                                     <NA> Estuary National Marine Sancturay
## 288                                     <NA> Estuary           Lower South Bay
## 289                                     <NA> Estuary           Lower South Bay
## 290                                     <NA> Estuary           Lower South Bay
## 291                                     <NA> Estuary           Lower South Bay
## 292                                     <NA> Estuary National Marine Sancturay
## 293                                     <NA> Estuary National Marine Sancturay
## 294                                     <NA> Estuary National Marine Sancturay
## 295                                     <NA> Estuary National Marine Sancturay
## 296                                     <NA> Estuary National Marine Sancturay
## 297                                     <NA> Estuary National Marine Sancturay
## 298                                     <NA> Estuary National Marine Sancturay
## 299                                     <NA> Estuary National Marine Sancturay
## 300                                     <NA> Estuary National Marine Sancturay
## 301                                     <NA> Estuary National Marine Sancturay
## 302                                     <NA> Estuary National Marine Sancturay
## 303                                     <NA> Estuary                 South Bay
## 304                                     <NA> Estuary                 South Bay
## 305                                     <NA> Estuary                 South Bay
## 306                                     <NA> Estuary                 South Bay
## 307                                     <NA> Estuary                 South Bay
## 308                                     <NA> Estuary                 South Bay
## 309                                     <NA> Estuary                 South Bay
## 310                                     <NA> Estuary                       SPB
## 311                                     <NA> Estuary                       SPB
## 312                                     <NA> Estuary                       SPB
## 313                                     <NA> Estuary                       SPB
## 314                                     <NA> Estuary                       SUB
## 315                                     <NA> Estuary                       SUB
##      latitude   longitude particles.L.blank.corrected
## 1      38.016    -122.254                   1.6300000
## 2      38.018    -122.277                   1.6500000
## 3   37.385832 -121.909581                   7.2000000
## 4       37.65    -122.412                   5.6300000
## 5      37.754    -122.204                   4.9400000
## 6      37.762    -122.214                   8.4300000
## 7      37.755    -122.201                  10.0600000
## 8    37.37356  -121.93283                   2.3100000
## 9   37.572638 -122.310769                   1.0900000
## 10  37.917861  -122.33838                  17.8400000
## 11   37.83429  -122.29349                  12.3600000
## 12  37.746843 -122.200699                  24.4100000
## 13    37.6952   -122.1858                   0.0645000
## 14    37.6952   -122.1858                   0.0115000
## 15    37.8236   -122.2956                   0.1778000
## 16    37.8236   -122.2956                   0.0421000
## 17    37.4527   -122.1108                   0.0030000
## 18    37.4527   -122.1108                   0.0054000
## 19    37.4332   -121.9522                   0.0186000
## 20    37.4332   -121.9522                   0.0233000
## 21    37.4193   -122.0162                   0.0222000
## 22    37.9961   -122.0686                   0.0778000
## 23    38.2233   -122.0829                   0.0037000
## 24    38.2233   -122.0829                   0.0055000
## 25    37.8236   -122.2956                   0.1083000
## 26    37.7476   -122.3728                   0.1593000
## 27    37.7476   -122.3728                   0.1816000
## 28    37.4193   -122.0162                   0.0075000
## 29    37.9961   -122.0686                   0.0683000
## 30    37.4576   -122.0921                          NA
## 31    37.4576   -122.0921                          NA
## 32    37.4576   -122.0921                          NA
## 33    37.4576   -122.0921                          NA
## 34    37.4576   -122.0921                          NA
## 35    37.4576   -122.0921                          NA
## 36    37.4576   -122.0921                          NA
## 37    37.4576   -122.0921                          NA
## 38    37.4576   -122.0921                          NA
## 39    37.4576   -122.0921                          NA
## 40    37.4576   -122.0921                          NA
## 41    37.4576   -122.0921                          NA
## 42    37.4576   -122.0921                          NA
## 43    37.4576   -122.0921                          NA
## 44    38.2093   -122.9292                          NA
## 45    38.2093   -122.9292                          NA
## 46    38.2093   -122.9292                          NA
## 47    38.2093   -122.9292                          NA
## 48    38.2093   -122.9292                          NA
## 49    38.2093   -122.9292                          NA
## 50    38.2093   -122.9292                          NA
## 51    38.2093   -122.9292                          NA
## 52    38.2093   -122.9292                          NA
## 53    38.2093   -122.9292                          NA
## 54    38.0908   -122.8358                          NA
## 55    38.0908   -122.8358                          NA
## 56    38.0908   -122.8358                          NA
## 57    38.0908   -122.8358                          NA
## 58    38.0908   -122.8358                          NA
## 59    38.0908   -122.8358                          NA
## 60    38.0908   -122.8358                          NA
## 61    38.0908   -122.8358                          NA
## 62    38.0908   -122.8358                          NA
## 63    38.0908   -122.8358                          NA
## 64    38.2093   -122.9292                          NA
## 65    38.2093   -122.9292                          NA
## 66    38.2093   -122.9292                          NA
## 67    38.2093   -122.9292                          NA
## 68    38.2093   -122.9292                          NA
## 69    38.2093   -122.9292                          NA
## 70    38.2093   -122.9292                          NA
## 71    38.2093   -122.9292                          NA
## 72    38.2093   -122.9292                          NA
## 73    38.2093   -122.9292                          NA
## 74    37.7579   -122.3055                          NA
## 75    37.7579   -122.3055                          NA
## 76    37.7579   -122.3055                          NA
## 77    37.7579   -122.3055                          NA
## 78    37.7579   -122.3055                          NA
## 79    37.7579   -122.3055                          NA
## 80    37.7579   -122.3055                          NA
## 81    37.7579   -122.3055                          NA
## 82    37.7579   -122.3055                          NA
## 83    37.7579   -122.3055                          NA
## 84    37.7579   -122.3055                          NA
## 85    37.7579   -122.3055                          NA
## 86    37.7579   -122.3055                          NA
## 87    37.7579   -122.3055                          NA
## 88    37.7579   -122.3055                          NA
## 89    37.7579   -122.3055                          NA
## 90    37.7579   -122.3055                          NA
## 91    37.7579   -122.3055                          NA
## 92    37.7579   -122.3055                          NA
## 93    37.7579   -122.3055                          NA
## 94    37.9067   -122.3467                          NA
## 95    37.9067   -122.3467                          NA
## 96    37.9067   -122.3467                          NA
## 97    37.9067   -122.3467                          NA
## 98    37.9067   -122.3467                          NA
## 99    37.9067   -122.3467                          NA
## 100   37.9067   -122.3467                          NA
## 101   37.9067   -122.3467                          NA
## 102   37.9067   -122.3467                          NA
## 103   37.9067   -122.3467                          NA
## 104   37.9067   -122.3467                          NA
## 105   37.9067   -122.3467                          NA
## 106   37.9067   -122.3467                          NA
## 107   37.9067   -122.3467                          NA
## 108   37.9067   -122.3467                          NA
## 109   37.9067   -122.3467                          NA
## 110   37.9067   -122.3467                          NA
## 111   37.9067   -122.3467                          NA
## 112   37.4621   -122.0217                          NA
## 113   37.4621   -122.0217                          NA
## 114   37.4621   -122.0217                          NA
## 115   37.4621   -122.0217                          NA
## 116   37.4621   -122.0217                          NA
## 117   37.4621   -122.0217                          NA
## 118   37.4621   -122.0217                          NA
## 119   37.4621   -122.0217                          NA
## 120   37.4621   -122.0217                          NA
## 121   37.4621   -122.0217                          NA
## 122   37.5277    -122.184                          NA
## 123   37.5277    -122.184                          NA
## 124   37.5277    -122.184                          NA
## 125   37.5277    -122.184                          NA
## 126   37.5277    -122.184                          NA
## 127   37.5277    -122.184                          NA
## 128   37.5277    -122.184                          NA
## 129   37.5277    -122.184                          NA
## 130   37.5277    -122.184                          NA
## 131   37.5277    -122.184                          NA
## 132   37.5277    -122.184                          NA
## 133   37.5277    -122.184                          NA
## 134   37.5277    -122.184                          NA
## 135   37.5277    -122.184                          NA
## 136   37.5277    -122.184                          NA
## 137   37.5277    -122.184                          NA
## 138   37.5277    -122.184                          NA
## 139   37.5277    -122.184                          NA
## 140   37.5277    -122.184                          NA
## 141   37.5277    -122.184                          NA
## 142   37.6414   -122.3945                          NA
## 143   37.6414   -122.3945                          NA
## 144   37.6414   -122.3945                          NA
## 145   37.6414   -122.3945                          NA
## 146   37.6414   -122.3945                          NA
## 147   37.6414   -122.3945                          NA
## 148   37.6414   -122.3945                          NA
## 149   37.6414   -122.3945                          NA
## 150   37.6414   -122.3945                          NA
## 151   37.6414   -122.3945                          NA
## 152   37.6414   -122.3945                          NA
## 153   37.6414   -122.3945                          NA
## 154   37.6414   -122.3945                          NA
## 155   37.6414   -122.3945                          NA
## 156   37.6414   -122.3945                          NA
## 157   37.6414   -122.3945                          NA
## 158   37.6414   -122.3945                          NA
## 159   37.6414   -122.3945                          NA
## 160   37.6414   -122.3945                          NA
## 161   37.6414   -122.3945                          NA
## 162   37.4621   -122.0217                          NA
## 163   37.4621   -122.0217                          NA
## 164   37.4621   -122.0217                          NA
## 165   37.4621   -122.0217                          NA
## 166   37.4621   -122.0217                          NA
## 167   37.4621   -122.0217                          NA
## 168   37.4621   -122.0217                          NA
## 169   37.4621   -122.0217                          NA
## 170   37.4621   -122.0217                          NA
## 171   37.4621   -122.0217                          NA
## 172   38.0908   -122.8358                          NA
## 173   38.0908   -122.8358                          NA
## 174   38.0908   -122.8358                          NA
## 175   38.0908   -122.8358                          NA
## 176   38.0908   -122.8358                          NA
## 177   38.0908   -122.8358                          NA
## 178   38.0908   -122.8358                          NA
## 179   38.0908   -122.8358                          NA
## 180   38.0908   -122.8358                          NA
## 181   38.0908   -122.8358                          NA
## 182   37.8766   -122.3615                          NA
## 183   37.9067   -122.3467                          NA
## 184   37.8279   -122.3034                          NA
## 185   37.7566   -122.2204                          NA
## 186   37.6414   -122.3945                          NA
## 187   37.4628    -122.105                          NA
## 188   37.4864    -122.069                          NA
## 189   37.4576    -122.092                          NA
## 190   37.6104    -122.167                          NA
## 191   37.6018    -122.362                          NA
## 192   37.5605    -122.131                          NA
## 193   37.5277    -122.184                          NA
## 194   37.4576     -122.04                          NA
## 195   37.4621    -122.022                          NA
## 196   38.0157   -122.3002                          NA
## 197   38.1084   -122.4881                          NA
## 198   38.1362    -122.035                          NA
## 199   38.0441   -122.0969                          NA
## 200   38.2093   -122.9292                          NA
## 201   38.0908   -122.8358                          NA
## 202     37.92     -122.44                   0.0000230
## 203     37.92     -122.43                   0.0061140
## 204     37.84     -122.42                   0.0004390
## 205     37.85     -122.41                   0.0018880
## 206     37.85     -122.41                   0.0005110
## 207     37.83     -122.32                   0.0000830
## 208     37.83     -122.32                   0.0004640
## 209       N/A         N/A                   0.0007740
## 210     37.78     -122.35                   0.0007290
## 211     37.75     -122.23                   0.0022650
## 212     37.75     -122.23                   0.0043430
## 213     37.69     -122.29                   0.0001880
## 214     37.69      -122.3                   0.0555910
## 215      38.1     -123.11                   0.0000880
## 216     38.11     -123.11                   0.0001630
## 217     38.02     -123.33                   0.0001260
## 218     38.03     -123.31                   0.0001390
## 219     37.99      -123.5                   0.0000000
## 220       N/A         N/A                   0.0000230
## 221     37.97     -122.93                   0.0002180
## 222     37.97     -122.93                   0.0000200
## 223     37.82     -123.02                   0.0000790
## 224     37.82     -123.01                   0.0001390
## 225     37.75     -123.26                   0.0000780
## 226     37.73     -123.26                   0.0000050
## 227     37.81     -122.76                   0.0000960
## 228     37.81     -122.76                   0.0000560
## 229     37.47     -122.06                   0.0009820
## 230     37.48     -122.08                   0.0002660
## 231     37.46     -122.08                   0.0003570
## 232     37.47     -122.09                   0.0002480
## 233     37.46     -122.03                   0.0001530
## 234     37.45     -122.03                   0.0005160
## 235     37.81     -122.47                   0.0003960
## 236     37.79      -122.5                   0.0002940
## 237      37.8      -122.5                   0.0002730
## 238     37.81     -122.51                   0.0000190
## 239     37.67     -122.61                   0.0000380
## 240     37.67     -122.61                   0.0000680
## 241     37.51     -122.57                   0.0000540
## 242     37.51     -122.58                   0.0000380
## 243     37.44     -122.93                   0.0000680
## 244     37.45     -122.93                   0.0000240
## 245     37.65     -122.24                   0.0001120
## 246     37.65     -122.23                   0.0002360
## 247      37.6     -122.25                   0.0001810
## 248     37.59      -122.2                   0.0026050
## 249     37.59     -122.28                   0.0001280
## 250     37.58     -122.27                   0.0004880
## 251     37.57     -122.21                   0.0028990
## 252     37.56     -122.22                   0.0013840
## 253     37.82     -122.36                   0.0004260
## 254     37.82     -122.36                   0.0004260
## 255     38.05     -122.42                   0.0000590
## 256     38.05     -122.42                   0.0000590
## 257     38.06     -122.42                   0.0000920
## 258     38.06     -122.42                   0.0000920
## 259     38.64     -122.37                   0.0006370
## 260     38.64     -122.37                   0.0006370
## 261     38.02     -122.37                   0.0014090
## 262     38.02     -122.37                   0.0014090
## 263     38.11     -122.06                   0.0000810
## 264     38.11     -122.06                   0.0000810
## 265     38.11     -122.06                   0.0001310
## 266     38.11     -122.06                   0.0001310
## 267  37.9156   -122.4412                    3.4653465
## 268  37.9229   -122.4330                    2.7348777
## 269  37.8430   -122.4150                    7.4331021
## 270  37.8445   -122.4069                    0.6277464
## 271  37.8342   -122.3204                    1.9509595
## 272  37.8339   -122.3221                    4.9844237
## 273      N/A         N/A                    2.3251073
## 274  37.7795   -122.3537                    1.5827794
## 275  37.7514   -122.2260                    2.7035623
## 276  37.7505   -122.2278                    2.5510204
## 277  37.6872   -122.2909                    6.5789474
## 278  37.6936   -122.2991                   18.7110187
## 279  38.1068   -123.1138                    3.0000000
## 280  38.0346   -123.3131                    1.6404199
## 281  37.9853   -123.4973                    8.6715227
## 282  37.8128   -122.4723                    0.6523157
## 283  37.9670   -122.9272                    0.0000000
## 284  37.9695   -122.9270                    1.8115942
## 285  37.8213   -123.0068                    0.7095745
## 286  37.7327   -123.2630                    1.2626263
## 287  37.8058   -122.7561                    3.6647546
## 288  37.4801   -122.0781                    3.0984997
## 289  37.4654   -122.0912                    1.2795905
## 290  37.4528   -122.0331                    7.6190476
## 291  37.4645   -122.0271                    2.4122807
## 292  37.8208   -123.0177                   13.5732323
## 293  37.8064   -122.7583                    2.3832221
## 294  37.8053   -122.5082                    0.9433962
## 295  37.7985   -122.5049                   35.7031494
## 296  37.7935   -122.5030                    2.2525988
## 297  37.6726   -122.6108                    2.2022684
## 298  37.6718   -122.6110                    1.6056519
## 299  37.5070   -122.5804                    4.2694497
## 300      N/A         N/A                    3.5020694
## 301  37.4504   -122.9320                   18.7659033
## 302  37.4446   -122.9280                    6.2984496
## 303  37.6534   -122.2281                    0.9980040
## 304  37.6500   -122.2433                    6.1443932
## 305  37.5863   -122.2022                    3.3460803
## 306  37.5983   -122.2502                    1.5957447
## 307  37.5829   -122.2708                    2.6666667
## 308  37.5649   -122.2227                    4.3383948
## 309  37.5701   -122.2129                    9.9313832
## 310  38.0513   -122.4218                    3.3333333
## 311  38.0598   -122.4244                    2.8333333
## 312  38.6405   -122.3716                    5.0860720
## 313  38.0239   -122.3682                    5.2430887
## 314  38.1071   -122.0563                    2.7646130
## 315  38.1079   -122.0570                    4.4275775
##     particles.fish.blank.corrected particles.kg.blank.corrected sample.matrix
## 1                               NA                           NA         water
## 2                               NA                           NA         water
## 3                               NA                           NA         water
## 4                               NA                           NA         water
## 5                               NA                           NA         water
## 6                               NA                           NA         water
## 7                               NA                           NA         water
## 8                               NA                           NA         water
## 9                               NA                           NA         water
## 10                              NA                           NA         water
## 11                              NA                           NA         water
## 12                              NA                           NA         water
## 13                              NA                           NA         water
## 14                              NA                           NA         water
## 15                              NA                           NA         water
## 16                              NA                           NA         water
## 17                              NA                           NA         water
## 18                              NA                           NA         water
## 19                              NA                           NA         water
## 20                              NA                           NA         water
## 21                              NA                           NA         water
## 22                              NA                           NA         water
## 23                              NA                           NA         water
## 24                              NA                           NA         water
## 25                              NA                           NA         water
## 26                              NA                           NA         water
## 27                              NA                           NA         water
## 28                              NA                           NA         water
## 29                              NA                           NA         water
## 30                           24.27                           NA          fish
## 31                            6.60                           NA          fish
## 32                            0.87                           NA          fish
## 33                            1.00                           NA          fish
## 34                            0.93                           NA          fish
## 35                            3.53                           NA          fish
## 36                            2.40                           NA          fish
## 37                           45.07                           NA          fish
## 38                            8.00                           NA          fish
## 39                           11.67                           NA          fish
## 40                            5.73                           NA          fish
## 41                            5.87                           NA          fish
## 42                           14.47                           NA          fish
## 43                            1.80                           NA          fish
## 44                            0.00                           NA          fish
## 45                            0.00                           NA          fish
## 46                            1.73                           NA          fish
## 47                            0.13                           NA          fish
## 48                            1.80                           NA          fish
## 49                            1.00                           NA          fish
## 50                            5.47                           NA          fish
## 51                            3.87                           NA          fish
## 52                            7.40                           NA          fish
## 53                            6.00                           NA          fish
## 54                            5.47                           NA          fish
## 55                            3.60                           NA          fish
## 56                            0.00                           NA          fish
## 57                            2.00                           NA          fish
## 58                            2.67                           NA          fish
## 59                            1.60                           NA          fish
## 60                            1.13                           NA          fish
## 61                            1.60                           NA          fish
## 62                            1.60                           NA          fish
## 63                            0.87                           NA          fish
## 64                            6.33                           NA          fish
## 65                            0.13                           NA          fish
## 66                           15.40                           NA          fish
## 67                           11.27                           NA          fish
## 68                           11.40                           NA          fish
## 69                            3.27                           NA          fish
## 70                           11.33                           NA          fish
## 71                            1.87                           NA          fish
## 72                            2.40                           NA          fish
## 73                            1.00                           NA          fish
## 74                           11.13                           NA          fish
## 75                            9.07                           NA          fish
## 76                            3.93                           NA          fish
## 77                            8.87                           NA          fish
## 78                            9.40                           NA          fish
## 79                            3.40                           NA          fish
## 80                            9.00                           NA          fish
## 81                           16.40                           NA          fish
## 82                            6.60                           NA          fish
## 83                            1.80                           NA          fish
## 84                           17.53                           NA          fish
## 85                           17.27                           NA          fish
## 86                           11.07                           NA          fish
## 87                           24.00                           NA          fish
## 88                           20.33                           NA          fish
## 89                           14.53                           NA          fish
## 90                           17.73                           NA          fish
## 91                            9.53                           NA          fish
## 92                           13.47                           NA          fish
## 93                           14.60                           NA          fish
## 94                           35.13                           NA          fish
## 95                           20.40                           NA          fish
## 96                           28.13                           NA          fish
## 97                           13.13                           NA          fish
## 98                           13.13                           NA          fish
## 99                            5.73                           NA          fish
## 100                          14.40                           NA          fish
## 101                          15.07                           NA          fish
## 102                          21.93                           NA          fish
## 103                           7.40                           NA          fish
## 104                          21.60                           NA          fish
## 105                          35.40                           NA          fish
## 106                          22.53                           NA          fish
## 107                           6.67                           NA          fish
## 108                          12.33                           NA          fish
## 109                          18.87                           NA          fish
## 110                           8.40                           NA          fish
## 111                           3.40                           NA          fish
## 112                           9.00                           NA          fish
## 113                           0.73                           NA          fish
## 114                           2.47                           NA          fish
## 115                           7.27                           NA          fish
## 116                           2.40                           NA          fish
## 117                           1.67                           NA          fish
## 118                           2.73                           NA          fish
## 119                           5.40                           NA          fish
## 120                           0.73                           NA          fish
## 121                           1.67                           NA          fish
## 122                           3.60                           NA          fish
## 123                           1.73                           NA          fish
## 124                           1.00                           NA          fish
## 125                           1.67                           NA          fish
## 126                          12.87                           NA          fish
## 127                           4.53                           NA          fish
## 128                           3.40                           NA          fish
## 129                           3.73                           NA          fish
## 130                           1.87                           NA          fish
## 131                           4.73                           NA          fish
## 132                          10.13                           NA          fish
## 133                          27.13                           NA          fish
## 134                          31.20                           NA          fish
## 135                          35.13                           NA          fish
## 136                          27.00                           NA          fish
## 137                          24.00                           NA          fish
## 138                          56.13                           NA          fish
## 139                          16.27                           NA          fish
## 140                          21.13                           NA          fish
## 141                          28.13                           NA          fish
## 142                          22.27                           NA          fish
## 143                           9.27                           NA          fish
## 144                          24.07                           NA          fish
## 145                           7.40                           NA          fish
## 146                          12.27                           NA          fish
## 147                           7.13                           NA          fish
## 148                           7.53                           NA          fish
## 149                           7.87                           NA          fish
## 150                           2.13                           NA          fish
## 151                           1.93                           NA          fish
## 152                           7.87                           NA          fish
## 153                           1.53                           NA          fish
## 154                           2.80                           NA          fish
## 155                           8.40                           NA          fish
## 156                          12.40                           NA          fish
## 157                           3.87                           NA          fish
## 158                           8.87                           NA          fish
## 159                           6.47                           NA          fish
## 160                           4.53                           NA          fish
## 161                           2.87                           NA          fish
## 162                          32.93                           NA          fish
## 163                          15.60                           NA          fish
## 164                          44.13                           NA          fish
## 165                          17.47                           NA          fish
## 166                           4.00                           NA          fish
## 167                           6.53                           NA          fish
## 168                           8.80                           NA          fish
## 169                          10.27                           NA          fish
## 170                           7.80                           NA          fish
## 171                           0.80                           NA          fish
## 172                          20.47                           NA          fish
## 173                          13.33                           NA          fish
## 174                           4.27                           NA          fish
## 175                           2.60                           NA          fish
## 176                           6.40                           NA          fish
## 177                           6.47                           NA          fish
## 178                           1.00                           NA          fish
## 179                           3.73                           NA          fish
## 180                           2.27                           NA          fish
## 181                           5.60                           NA          fish
## 182                             NA                       425.56      sediment
## 183                             NA                      1140.55      sediment
## 184                             NA                      1610.94      sediment
## 185                             NA                     12095.68      sediment
## 186                             NA                      2730.69      sediment
## 187                             NA                     42104.17      sediment
## 188                             NA                      3647.26      sediment
## 189                             NA                      7108.70      sediment
## 190                             NA                      2893.81      sediment
## 191                             NA                       835.84      sediment
## 192                             NA                        26.67      sediment
## 193                             NA                       313.33      sediment
## 194                             NA                      9270.83      sediment
## 195                             NA                      7045.45      sediment
## 196                             NA                       567.78      sediment
## 197                             NA                      1028.07      sediment
## 198                             NA                       250.00      sediment
## 199                             NA                       131.02      sediment
## 200                             NA                       100.07      sediment
## 201                             NA                       216.38      sediment
## 202                             NA                           NA         water
## 203                             NA                           NA         water
## 204                             NA                           NA         water
## 205                             NA                           NA         water
## 206                             NA                           NA         water
## 207                             NA                           NA         water
## 208                             NA                           NA         water
## 209                             NA                           NA         water
## 210                             NA                           NA         water
## 211                             NA                           NA         water
## 212                             NA                           NA         water
## 213                             NA                           NA         water
## 214                             NA                           NA         water
## 215                             NA                           NA         water
## 216                             NA                           NA         water
## 217                             NA                           NA         water
## 218                             NA                           NA         water
## 219                             NA                           NA         water
## 220                             NA                           NA         water
## 221                             NA                           NA         water
## 222                             NA                           NA         water
## 223                             NA                           NA         water
## 224                             NA                           NA         water
## 225                             NA                           NA         water
## 226                             NA                           NA         water
## 227                             NA                           NA         water
## 228                             NA                           NA         water
## 229                             NA                           NA         water
## 230                             NA                           NA         water
## 231                             NA                           NA         water
## 232                             NA                           NA         water
## 233                             NA                           NA         water
## 234                             NA                           NA         water
## 235                             NA                           NA         water
## 236                             NA                           NA         water
## 237                             NA                           NA         water
## 238                             NA                           NA         water
## 239                             NA                           NA         water
## 240                             NA                           NA         water
## 241                             NA                           NA         water
## 242                             NA                           NA         water
## 243                             NA                           NA         water
## 244                             NA                           NA         water
## 245                             NA                           NA         water
## 246                             NA                           NA         water
## 247                             NA                           NA         water
## 248                             NA                           NA         water
## 249                             NA                           NA         water
## 250                             NA                           NA         water
## 251                             NA                           NA         water
## 252                             NA                           NA         water
## 253                             NA                           NA         water
## 254                             NA                           NA         water
## 255                             NA                           NA         water
## 256                             NA                           NA         water
## 257                             NA                           NA         water
## 258                             NA                           NA         water
## 259                             NA                           NA         water
## 260                             NA                           NA         water
## 261                             NA                           NA         water
## 262                             NA                           NA         water
## 263                             NA                           NA         water
## 264                             NA                           NA         water
## 265                             NA                           NA         water
## 266                             NA                           NA         water
## 267                             NA                           NA         water
## 268                             NA                           NA         water
## 269                             NA                           NA         water
## 270                             NA                           NA         water
## 271                             NA                           NA         water
## 272                             NA                           NA         water
## 273                             NA                           NA         water
## 274                             NA                           NA         water
## 275                             NA                           NA         water
## 276                             NA                           NA         water
## 277                             NA                           NA         water
## 278                             NA                           NA         water
## 279                             NA                           NA         water
## 280                             NA                           NA         water
## 281                             NA                           NA         water
## 282                             NA                           NA         water
## 283                             NA                           NA         water
## 284                             NA                           NA         water
## 285                             NA                           NA         water
## 286                             NA                           NA         water
## 287                             NA                           NA         water
## 288                             NA                           NA         water
## 289                             NA                           NA         water
## 290                             NA                           NA         water
## 291                             NA                           NA         water
## 292                             NA                           NA         water
## 293                             NA                           NA         water
## 294                             NA                           NA         water
## 295                             NA                           NA         water
## 296                             NA                           NA         water
## 297                             NA                           NA         water
## 298                             NA                           NA         water
## 299                             NA                           NA         water
## 300                             NA                           NA         water
## 301                             NA                           NA         water
## 302                             NA                           NA         water
## 303                             NA                           NA         water
## 304                             NA                           NA         water
## 305                             NA                           NA         water
## 306                             NA                           NA         water
## 307                             NA                           NA         water
## 308                             NA                           NA         water
## 309                             NA                           NA         water
## 310                             NA                           NA         water
## 311                             NA                           NA         water
## 312                             NA                           NA         water
## 313                             NA                           NA         water
## 314                             NA                           NA         water
## 315                             NA                           NA         water
##     sample.matrix.specific               Sampling.apparatus x1M  x2M
## 1               stormwater depth-integrated perisaltic pump 106 5000
## 2               stormwater depth-integrated perisaltic pump 106 5000
## 3               stormwater depth-integrated perisaltic pump 106 5000
## 4               stormwater depth-integrated perisaltic pump 106 5000
## 5               stormwater depth-integrated perisaltic pump 106 5000
## 6               stormwater depth-integrated perisaltic pump 106 5000
## 7               stormwater depth-integrated perisaltic pump 106 5000
## 8               stormwater depth-integrated perisaltic pump 106 5000
## 9               stormwater depth-integrated perisaltic pump 106 5000
## 10              stormwater depth-integrated perisaltic pump 106 5000
## 11              stormwater depth-integrated perisaltic pump 106 5000
## 12              stormwater depth-integrated perisaltic pump 106 5000
## 13              wastewater                        Composite 110 5000
## 14              wastewater                        Composite 110 5000
## 15              wastewater                        Composite 110 5000
## 16              wastewater                        Composite 110 5000
## 17              wastewater                        Composite 110 5000
## 18              wastewater                        Composite 110 5000
## 19              wastewater                        Composite 110 5000
## 20              wastewater                        Composite 110 5000
## 21              wastewater                        Composite 110 5000
## 22              wastewater                        Composite 110 5000
## 23              wastewater                        Composite 110 5000
## 24              wastewater                        Composite 110 5000
## 25              wastewater                        Composite 110 5000
## 26              wastewater                        Composite 110 5000
## 27              wastewater                        Composite 110 5000
## 28              wastewater                        Composite 110 5000
## 29              wastewater                        Composite 110 5000
## 30                 anchovy             otter trawl/cast net  25 5000
## 31                 anchovy             otter trawl/cast net  25 5000
## 32                 anchovy             otter trawl/cast net  25 5000
## 33                topsmelt             otter trawl/cast net  25 5000
## 34                topsmelt             otter trawl/cast net  25 5000
## 35                topsmelt             otter trawl/cast net  25 5000
## 36                topsmelt             otter trawl/cast net  25 5000
## 37                 anchovy             otter trawl/cast net  25 5000
## 38                topsmelt             otter trawl/cast net  25 5000
## 39                topsmelt             otter trawl/cast net  25 5000
## 40                topsmelt             otter trawl/cast net  25 5000
## 41                topsmelt             otter trawl/cast net  25 5000
## 42                topsmelt             otter trawl/cast net  25 5000
## 43                topsmelt             otter trawl/cast net  25 5000
## 44                 anchovy             otter trawl/cast net  25 5000
## 45                 anchovy             otter trawl/cast net  25 5000
## 46                 anchovy             otter trawl/cast net  25 5000
## 47                 anchovy             otter trawl/cast net  25 5000
## 48                 anchovy             otter trawl/cast net  25 5000
## 49                 anchovy             otter trawl/cast net  25 5000
## 50                 anchovy             otter trawl/cast net  25 5000
## 51                 anchovy             otter trawl/cast net  25 5000
## 52                 anchovy             otter trawl/cast net  25 5000
## 53                 anchovy             otter trawl/cast net  25 5000
## 54                 anchovy             otter trawl/cast net  25 5000
## 55                 anchovy             otter trawl/cast net  25 5000
## 56                 anchovy             otter trawl/cast net  25 5000
## 57                 anchovy             otter trawl/cast net  25 5000
## 58                 anchovy             otter trawl/cast net  25 5000
## 59                 anchovy             otter trawl/cast net  25 5000
## 60                 anchovy             otter trawl/cast net  25 5000
## 61                 anchovy             otter trawl/cast net  25 5000
## 62                 anchovy             otter trawl/cast net  25 5000
## 63                 anchovy             otter trawl/cast net  25 5000
## 64                topsmelt             otter trawl/cast net  25 5000
## 65                topsmelt             otter trawl/cast net  25 5000
## 66                topsmelt             otter trawl/cast net  25 5000
## 67                topsmelt             otter trawl/cast net  25 5000
## 68                topsmelt             otter trawl/cast net  25 5000
## 69                topsmelt             otter trawl/cast net  25 5000
## 70                topsmelt             otter trawl/cast net  25 5000
## 71                topsmelt             otter trawl/cast net  25 5000
## 72                topsmelt             otter trawl/cast net  25 5000
## 73                topsmelt             otter trawl/cast net  25 5000
## 74                topsmelt             otter trawl/cast net  25 5000
## 75                topsmelt             otter trawl/cast net  25 5000
## 76                topsmelt             otter trawl/cast net  25 5000
## 77                topsmelt             otter trawl/cast net  25 5000
## 78                topsmelt             otter trawl/cast net  25 5000
## 79                topsmelt             otter trawl/cast net  25 5000
## 80                topsmelt             otter trawl/cast net  25 5000
## 81                topsmelt             otter trawl/cast net  25 5000
## 82                topsmelt             otter trawl/cast net  25 5000
## 83                topsmelt             otter trawl/cast net  25 5000
## 84                 anchovy             otter trawl/cast net  25 5000
## 85                 anchovy             otter trawl/cast net  25 5000
## 86                 anchovy             otter trawl/cast net  25 5000
## 87                 anchovy             otter trawl/cast net  25 5000
## 88                 anchovy             otter trawl/cast net  25 5000
## 89                 anchovy             otter trawl/cast net  25 5000
## 90                 anchovy             otter trawl/cast net  25 5000
## 91                 anchovy             otter trawl/cast net  25 5000
## 92                 anchovy             otter trawl/cast net  25 5000
## 93                 anchovy             otter trawl/cast net  25 5000
## 94                 anchovy             otter trawl/cast net  25 5000
## 95                 anchovy             otter trawl/cast net  25 5000
## 96                 anchovy             otter trawl/cast net  25 5000
## 97                 anchovy             otter trawl/cast net  25 5000
## 98                 anchovy             otter trawl/cast net  25 5000
## 99                 anchovy             otter trawl/cast net  25 5000
## 100                anchovy             otter trawl/cast net  25 5000
## 101                anchovy             otter trawl/cast net  25 5000
## 102                anchovy             otter trawl/cast net  25 5000
## 103                anchovy             otter trawl/cast net  25 5000
## 104               topsmelt             otter trawl/cast net  25 5000
## 105               topsmelt             otter trawl/cast net  25 5000
## 106               topsmelt             otter trawl/cast net  25 5000
## 107               topsmelt             otter trawl/cast net  25 5000
## 108               topsmelt             otter trawl/cast net  25 5000
## 109               topsmelt             otter trawl/cast net  25 5000
## 110               topsmelt             otter trawl/cast net  25 5000
## 111               topsmelt             otter trawl/cast net  25 5000
## 112                anchovy             otter trawl/cast net  25 5000
## 113                anchovy             otter trawl/cast net  25 5000
## 114                anchovy             otter trawl/cast net  25 5000
## 115                anchovy             otter trawl/cast net  25 5000
## 116                anchovy             otter trawl/cast net  25 5000
## 117                anchovy             otter trawl/cast net  25 5000
## 118                anchovy             otter trawl/cast net  25 5000
## 119                anchovy             otter trawl/cast net  25 5000
## 120                anchovy             otter trawl/cast net  25 5000
## 121                anchovy             otter trawl/cast net  25 5000
## 122                anchovy             otter trawl/cast net  25 5000
## 123                anchovy             otter trawl/cast net  25 5000
## 124                anchovy             otter trawl/cast net  25 5000
## 125                anchovy             otter trawl/cast net  25 5000
## 126                anchovy             otter trawl/cast net  25 5000
## 127                anchovy             otter trawl/cast net  25 5000
## 128                anchovy             otter trawl/cast net  25 5000
## 129                anchovy             otter trawl/cast net  25 5000
## 130                anchovy             otter trawl/cast net  25 5000
## 131                anchovy             otter trawl/cast net  25 5000
## 132               topsmelt             otter trawl/cast net  25 5000
## 133               topsmelt             otter trawl/cast net  25 5000
## 134               topsmelt             otter trawl/cast net  25 5000
## 135               topsmelt             otter trawl/cast net  25 5000
## 136               topsmelt             otter trawl/cast net  25 5000
## 137               topsmelt             otter trawl/cast net  25 5000
## 138               topsmelt             otter trawl/cast net  25 5000
## 139               topsmelt             otter trawl/cast net  25 5000
## 140               topsmelt             otter trawl/cast net  25 5000
## 141               topsmelt             otter trawl/cast net  25 5000
## 142                anchovy             otter trawl/cast net  25 5000
## 143                anchovy             otter trawl/cast net  25 5000
## 144                anchovy             otter trawl/cast net  25 5000
## 145                anchovy             otter trawl/cast net  25 5000
## 146                anchovy             otter trawl/cast net  25 5000
## 147                anchovy             otter trawl/cast net  25 5000
## 148                anchovy             otter trawl/cast net  25 5000
## 149                anchovy             otter trawl/cast net  25 5000
## 150                anchovy             otter trawl/cast net  25 5000
## 151                anchovy             otter trawl/cast net  25 5000
## 152               topsmelt             otter trawl/cast net  25 5000
## 153               topsmelt             otter trawl/cast net  25 5000
## 154               topsmelt             otter trawl/cast net  25 5000
## 155               topsmelt             otter trawl/cast net  25 5000
## 156               topsmelt             otter trawl/cast net  25 5000
## 157               topsmelt             otter trawl/cast net  25 5000
## 158               topsmelt             otter trawl/cast net  25 5000
## 159               topsmelt             otter trawl/cast net  25 5000
## 160               topsmelt             otter trawl/cast net  25 5000
## 161               topsmelt             otter trawl/cast net  25 5000
## 162               topsmelt             otter trawl/cast net  25 5000
## 163               topsmelt             otter trawl/cast net  25 5000
## 164               topsmelt             otter trawl/cast net  25 5000
## 165               topsmelt             otter trawl/cast net  25 5000
## 166               topsmelt             otter trawl/cast net  25 5000
## 167               topsmelt             otter trawl/cast net  25 5000
## 168               topsmelt             otter trawl/cast net  25 5000
## 169               topsmelt             otter trawl/cast net  25 5000
## 170               topsmelt             otter trawl/cast net  25 5000
## 171               topsmelt             otter trawl/cast net  25 5000
## 172               topsmelt             otter trawl/cast net  25 5000
## 173               topsmelt             otter trawl/cast net  25 5000
## 174               topsmelt             otter trawl/cast net  25 5000
## 175               topsmelt             otter trawl/cast net  25 5000
## 176               topsmelt             otter trawl/cast net  25 5000
## 177               topsmelt             otter trawl/cast net  25 5000
## 178               topsmelt             otter trawl/cast net  25 5000
## 179               topsmelt             otter trawl/cast net  25 5000
## 180               topsmelt             otter trawl/cast net  25 5000
## 181               topsmelt             otter trawl/cast net  25 5000
## 182               sediment                    Van Veen Grab  45 5000
## 183               sediment                    Van Veen Grab  45 5000
## 184               sediment                    Van Veen Grab  45 5000
## 185               sediment                    Van Veen Grab  45 5000
## 186               sediment                    Van Veen Grab  45 5000
## 187               sediment                    Van Veen Grab  45 5000
## 188               sediment                    Van Veen Grab  45 5000
## 189               sediment                    Van Veen Grab  45 5000
## 190               sediment                    Van Veen Grab  45 5000
## 191               sediment                    Van Veen Grab  45 5000
## 192               sediment                    Van Veen Grab  45 5000
## 193               sediment                    Van Veen Grab  45 5000
## 194               sediment                    Van Veen Grab  45 5000
## 195               sediment                    Van Veen Grab  45 5000
## 196               sediment                    Van Veen Grab  45 5000
## 197               sediment                    Van Veen Grab  45 5000
## 198               sediment                    Van Veen Grab  45 5000
## 199               sediment                    Van Veen Grab  45 5000
## 200               sediment                    Van Veen Grab  45 5000
## 201               sediment                    Van Veen Grab  45 5000
## 202          surface water                      Manta Trawl 333 5000
## 203          surface water                      Manta Trawl 333 5000
## 204          surface water                      Manta Trawl 333 5000
## 205          surface water                      Manta Trawl 333 5000
## 206          surface water                      Manta Trawl 333 5000
## 207          surface water                      Manta Trawl 333 5000
## 208          surface water                      Manta Trawl 333 5000
## 209          surface water                      Manta Trawl 333 5000
## 210          surface water                      Manta Trawl 333 5000
## 211          surface water                      Manta Trawl 333 5000
## 212          surface water                      Manta Trawl 333 5000
## 213          surface water                      Manta Trawl 333 5000
## 214          surface water                      Manta Trawl 333 5000
## 215          surface water                      Manta Trawl 333 5000
## 216          surface water                      Manta Trawl 333 5000
## 217          surface water                      Manta Trawl 333 5000
## 218          surface water                      Manta Trawl 333 5000
## 219          surface water                      Manta Trawl 333 5000
## 220          surface water                      Manta Trawl 333 5000
## 221          surface water                      Manta Trawl 333 5000
## 222          surface water                      Manta Trawl 333 5000
## 223          surface water                      Manta Trawl 333 5000
## 224          surface water                      Manta Trawl 333 5000
## 225          surface water                      Manta Trawl 333 5000
## 226          surface water                      Manta Trawl 333 5000
## 227          surface water                      Manta Trawl 333 5000
## 228          surface water                      Manta Trawl 333 5000
## 229          surface water                      Manta Trawl 333 5000
## 230          surface water                      Manta Trawl 333 5000
## 231          surface water                      Manta Trawl 333 5000
## 232          surface water                      Manta Trawl 333 5000
## 233          surface water                      Manta Trawl 333 5000
## 234          surface water                      Manta Trawl 333 5000
## 235          surface water                      Manta Trawl 333 5000
## 236          surface water                      Manta Trawl 333 5000
## 237          surface water                      Manta Trawl 333 5000
## 238          surface water                      Manta Trawl 333 5000
## 239          surface water                      Manta Trawl 333 5000
## 240          surface water                      Manta Trawl 333 5000
## 241          surface water                      Manta Trawl 333 5000
## 242          surface water                      Manta Trawl 333 5000
## 243          surface water                      Manta Trawl 333 5000
## 244          surface water                      Manta Trawl 333 5000
## 245          surface water                      Manta Trawl 333 5000
## 246          surface water                      Manta Trawl 333 5000
## 247          surface water                      Manta Trawl 333 5000
## 248          surface water                      Manta Trawl 333 5000
## 249          surface water                      Manta Trawl 333 5000
## 250          surface water                      Manta Trawl 333 5000
## 251          surface water                      Manta Trawl 333 5000
## 252          surface water                      Manta Trawl 333 5000
## 253          surface water                      Manta Trawl 333 5000
## 254          surface water                      Manta Trawl 333 5000
## 255          surface water                      Manta Trawl 333 5000
## 256          surface water                      Manta Trawl 333 5000
## 257          surface water                      Manta Trawl 333 5000
## 258          surface water                      Manta Trawl 333 5000
## 259          surface water                      Manta Trawl 333 5000
## 260          surface water                      Manta Trawl 333 5000
## 261          surface water                      Manta Trawl 333 5000
## 262          surface water                      Manta Trawl 333 5000
## 263          surface water                      Manta Trawl 333 5000
## 264          surface water                      Manta Trawl 333 5000
## 265          surface water                      Manta Trawl 333 5000
## 266          surface water                      Manta Trawl 333 5000
## 267          surface water                         1-L grab  50 5000
## 268          surface water                         1-L grab  50 5000
## 269          surface water                         1-L grab  50 5000
## 270          surface water                         1-L grab  50 5000
## 271          surface water                         1-L grab  50 5000
## 272          surface water                         1-L grab  50 5000
## 273          surface water                         1-L grab  50 5000
## 274          surface water                         1-L grab  50 5000
## 275          surface water                         1-L grab  50 5000
## 276          surface water                         1-L grab  50 5000
## 277          surface water                         1-L grab  50 5000
## 278          surface water                         1-L grab  50 5000
## 279          surface water                         1-L grab  50 5000
## 280          surface water                         1-L grab  50 5000
## 281          surface water                         1-L grab  50 5000
## 282          surface water                         1-L grab  50 5000
## 283          surface water                         1-L grab  50 5000
## 284          surface water                         1-L grab  50 5000
## 285          surface water                         1-L grab  50 5000
## 286          surface water                         1-L grab  50 5000
## 287          surface water                         1-L grab  50 5000
## 288          surface water                         1-L grab  50 5000
## 289          surface water                         1-L grab  50 5000
## 290          surface water                         1-L grab  50 5000
## 291          surface water                         1-L grab  50 5000
## 292          surface water                         1-L grab  50 5000
## 293          surface water                         1-L grab  50 5000
## 294          surface water                         1-L grab  50 5000
## 295          surface water                         1-L grab  50 5000
## 296          surface water                         1-L grab  50 5000
## 297          surface water                         1-L grab  50 5000
## 298          surface water                         1-L grab  50 5000
## 299          surface water                         1-L grab  50 5000
## 300          surface water                         1-L grab  50 5000
## 301          surface water                         1-L grab  50 5000
## 302          surface water                         1-L grab  50 5000
## 303          surface water                         1-L grab  50 5000
## 304          surface water                         1-L grab  50 5000
## 305          surface water                         1-L grab  50 5000
## 306          surface water                         1-L grab  50 5000
## 307          surface water                         1-L grab  50 5000
## 308          surface water                         1-L grab  50 5000
## 309          surface water                         1-L grab  50 5000
## 310          surface water                         1-L grab  50 5000
## 311          surface water                         1-L grab  50 5000
## 312          surface water                         1-L grab  50 5000
## 313          surface water                         1-L grab  50 5000
## 314          surface water                         1-L grab  50 5000
## 315          surface water                         1-L grab  50 5000
##     Sample.Type season fiber.correction.factor fiber.correction.factor.sd
## 1        sample   <NA>                1.000000                         NA
## 2        sample   <NA>                1.000000                         NA
## 3        sample   <NA>                1.000000                         NA
## 4        sample   <NA>                1.000000                         NA
## 5        sample   <NA>                1.000000                         NA
## 6        sample   <NA>                1.000000                         NA
## 7        sample   <NA>                1.000000                         NA
## 8        sample   <NA>                1.000000                         NA
## 9        sample   <NA>                1.000000                         NA
## 10       sample   <NA>                1.000000                         NA
## 11       sample   <NA>                1.000000                         NA
## 12       sample   <NA>                1.000000                         NA
## 13       sample    dry                1.000000                         NA
## 14       sample    dry                1.000000                         NA
## 15       sample    dry                1.000000                         NA
## 16       sample    dry                1.000000                         NA
## 17       sample    dry                1.000000                         NA
## 18       sample   <NA>                1.000000                         NA
## 19       sample    dry                1.000000                         NA
## 20       sample    dry                1.000000                         NA
## 21       sample    dry                1.000000                         NA
## 22       sample    dry                1.000000                         NA
## 23       sample    dry                1.000000                         NA
## 24       sample    dry                1.000000                         NA
## 25       sample   <NA>                1.000000                         NA
## 26       sample    wet                1.000000                         NA
## 27       sample    wet                1.000000                         NA
## 28       sample   <NA>                1.000000                         NA
## 29       sample    wet                1.000000                         NA
## 30       sample   <NA>                1.000000                         NA
## 31       sample   <NA>                1.000000                         NA
## 32       sample   <NA>                1.000000                         NA
## 33       sample   <NA>                1.000000                         NA
## 34       sample   <NA>                1.000000                         NA
## 35       sample   <NA>                1.000000                         NA
## 36       sample   <NA>                1.000000                         NA
## 37       sample   <NA>                1.000000                         NA
## 38       sample   <NA>                1.000000                         NA
## 39       sample   <NA>                1.000000                         NA
## 40       sample   <NA>                1.000000                         NA
## 41       sample   <NA>                1.000000                         NA
## 42       sample   <NA>                1.000000                         NA
## 43       sample   <NA>                1.000000                         NA
## 44       sample   <NA>                1.000000                         NA
## 45       sample   <NA>                1.000000                         NA
## 46       sample   <NA>                1.000000                         NA
## 47       sample   <NA>                1.000000                         NA
## 48       sample   <NA>                1.000000                         NA
## 49       sample   <NA>                1.000000                         NA
## 50       sample   <NA>                1.000000                         NA
## 51       sample   <NA>                1.000000                         NA
## 52       sample   <NA>                1.000000                         NA
## 53       sample   <NA>                1.000000                         NA
## 54       sample   <NA>                1.000000                         NA
## 55       sample   <NA>                1.000000                         NA
## 56       sample   <NA>                1.000000                         NA
## 57       sample   <NA>                1.000000                         NA
## 58       sample   <NA>                1.000000                         NA
## 59       sample   <NA>                1.000000                         NA
## 60       sample   <NA>                1.000000                         NA
## 61       sample   <NA>                1.000000                         NA
## 62       sample   <NA>                1.000000                         NA
## 63       sample   <NA>                1.000000                         NA
## 64       sample   <NA>                1.000000                         NA
## 65       sample   <NA>                1.000000                         NA
## 66       sample   <NA>                1.000000                         NA
## 67       sample   <NA>                1.000000                         NA
## 68       sample   <NA>                1.000000                         NA
## 69       sample   <NA>                1.000000                         NA
## 70       sample   <NA>                1.000000                         NA
## 71       sample   <NA>                1.000000                         NA
## 72       sample   <NA>                1.000000                         NA
## 73       sample   <NA>                1.000000                         NA
## 74       sample   <NA>                1.000000                         NA
## 75       sample   <NA>                1.000000                         NA
## 76       sample   <NA>                1.000000                         NA
## 77       sample   <NA>                1.000000                         NA
## 78       sample   <NA>                1.000000                         NA
## 79       sample   <NA>                1.000000                         NA
## 80       sample   <NA>                1.000000                         NA
## 81       sample   <NA>                1.000000                         NA
## 82       sample   <NA>                1.000000                         NA
## 83       sample   <NA>                1.000000                         NA
## 84       sample   <NA>                1.000000                         NA
## 85       sample   <NA>                1.000000                         NA
## 86       sample   <NA>                1.000000                         NA
## 87       sample   <NA>                1.000000                         NA
## 88       sample   <NA>                1.000000                         NA
## 89       sample   <NA>                1.000000                         NA
## 90       sample   <NA>                1.000000                         NA
## 91       sample   <NA>                1.000000                         NA
## 92       sample   <NA>                1.000000                         NA
## 93       sample   <NA>                1.000000                         NA
## 94       sample   <NA>                1.000000                         NA
## 95       sample   <NA>                1.000000                         NA
## 96       sample   <NA>                1.000000                         NA
## 97       sample   <NA>                1.000000                         NA
## 98       sample   <NA>                1.000000                         NA
## 99       sample   <NA>                1.000000                         NA
## 100      sample   <NA>                1.000000                         NA
## 101      sample   <NA>                1.000000                         NA
## 102      sample   <NA>                1.000000                         NA
## 103      sample   <NA>                1.000000                         NA
## 104      sample   <NA>                1.000000                         NA
## 105      sample   <NA>                1.000000                         NA
## 106      sample   <NA>                1.000000                         NA
## 107      sample   <NA>                1.000000                         NA
## 108      sample   <NA>                1.000000                         NA
## 109      sample   <NA>                1.000000                         NA
## 110      sample   <NA>                1.000000                         NA
## 111      sample   <NA>                1.000000                         NA
## 112      sample   <NA>                1.000000                         NA
## 113      sample   <NA>                1.000000                         NA
## 114      sample   <NA>                1.000000                         NA
## 115      sample   <NA>                1.000000                         NA
## 116      sample   <NA>                1.000000                         NA
## 117      sample   <NA>                1.000000                         NA
## 118      sample   <NA>                1.000000                         NA
## 119      sample   <NA>                1.000000                         NA
## 120      sample   <NA>                1.000000                         NA
## 121      sample   <NA>                1.000000                         NA
## 122      sample   <NA>                1.000000                         NA
## 123      sample   <NA>                1.000000                         NA
## 124      sample   <NA>                1.000000                         NA
## 125      sample   <NA>                1.000000                         NA
## 126      sample   <NA>                1.000000                         NA
## 127      sample   <NA>                1.000000                         NA
## 128      sample   <NA>                1.000000                         NA
## 129      sample   <NA>                1.000000                         NA
## 130      sample   <NA>                1.000000                         NA
## 131      sample   <NA>                1.000000                         NA
## 132      sample   <NA>                1.000000                         NA
## 133      sample   <NA>                1.000000                         NA
## 134      sample   <NA>                1.000000                         NA
## 135      sample   <NA>                1.000000                         NA
## 136      sample   <NA>                1.000000                         NA
## 137      sample   <NA>                1.000000                         NA
## 138      sample   <NA>                1.000000                         NA
## 139      sample   <NA>                1.000000                         NA
## 140      sample   <NA>                1.000000                         NA
## 141      sample   <NA>                1.000000                         NA
## 142      sample   <NA>                1.000000                         NA
## 143      sample   <NA>                1.000000                         NA
## 144      sample   <NA>                1.000000                         NA
## 145      sample   <NA>                1.000000                         NA
## 146      sample   <NA>                1.000000                         NA
## 147      sample   <NA>                1.000000                         NA
## 148      sample   <NA>                1.000000                         NA
## 149      sample   <NA>                1.000000                         NA
## 150      sample   <NA>                1.000000                         NA
## 151      sample   <NA>                1.000000                         NA
## 152      sample   <NA>                1.000000                         NA
## 153      sample   <NA>                1.000000                         NA
## 154      sample   <NA>                1.000000                         NA
## 155      sample   <NA>                1.000000                         NA
## 156      sample   <NA>                1.000000                         NA
## 157      sample   <NA>                1.000000                         NA
## 158      sample   <NA>                1.000000                         NA
## 159      sample   <NA>                1.000000                         NA
## 160      sample   <NA>                1.000000                         NA
## 161      sample   <NA>                1.000000                         NA
## 162      sample   <NA>                1.000000                         NA
## 163      sample   <NA>                1.000000                         NA
## 164      sample   <NA>                1.000000                         NA
## 165      sample   <NA>                1.000000                         NA
## 166      sample   <NA>                1.000000                         NA
## 167      sample   <NA>                1.000000                         NA
## 168      sample   <NA>                1.000000                         NA
## 169      sample   <NA>                1.000000                         NA
## 170      sample   <NA>                1.000000                         NA
## 171      sample   <NA>                1.000000                         NA
## 172      sample   <NA>                1.000000                         NA
## 173      sample   <NA>                1.000000                         NA
## 174      sample   <NA>                1.000000                         NA
## 175      sample   <NA>                1.000000                         NA
## 176      sample   <NA>                1.000000                         NA
## 177      sample   <NA>                1.000000                         NA
## 178      sample   <NA>                1.000000                         NA
## 179      sample   <NA>                1.000000                         NA
## 180      sample   <NA>                1.000000                         NA
## 181      sample   <NA>                1.000000                         NA
## 182      sample   <NA>                1.000000                         NA
## 183      sample   <NA>                1.000000                         NA
## 184      sample   <NA>                1.000000                         NA
## 185      sample   <NA>                1.000000                         NA
## 186      sample   <NA>                1.000000                         NA
## 187      sample   <NA>                1.000000                         NA
## 188      sample   <NA>                1.000000                         NA
## 189      sample   <NA>                1.000000                         NA
## 190      sample   <NA>                1.000000                         NA
## 191      sample   <NA>                1.000000                         NA
## 192      sample   <NA>                1.000000                         NA
## 193      sample   <NA>                1.000000                         NA
## 194      sample   <NA>                1.000000                         NA
## 195      sample   <NA>                1.000000                         NA
## 196      sample   <NA>                1.000000                         NA
## 197      sample   <NA>                1.000000                         NA
## 198      sample   <NA>                1.000000                         NA
## 199      sample   <NA>                1.000000                         NA
## 200      sample   <NA>                1.000000                         NA
## 201      sample   <NA>                1.000000                         NA
## 202      sample    dry                4.598399                   1.393976
## 203      sample    wet                4.598399                   1.393976
## 204      sample    dry                4.598399                   1.393976
## 205      sample    wet                4.598399                   1.393976
## 206      sample    wet                4.598399                   1.393976
## 207      sample    dry                4.598399                   1.393976
## 208      sample    wet                4.598399                   1.393976
## 209      sample    dry                4.598399                   1.393976
## 210      sample    wet                4.598399                   1.393976
## 211      sample    dry                4.598399                   1.393976
## 212      sample    wet                4.598399                   1.393976
## 213      sample    dry                4.598399                   1.393976
## 214      sample    wet                4.598399                   1.393976
## 215      sample    wet                4.598399                   1.393976
## 216      sample    dry                4.598399                   1.393976
## 217      sample    wet                4.598399                   1.393976
## 218      sample    dry                4.598399                   1.393976
## 219      sample    dry                4.598399                   1.393976
## 220      sample    wet                4.598399                   1.393976
## 221      sample    wet                4.598399                   1.393976
## 222      sample    dry                4.598399                   1.393976
## 223      sample    wet                4.598399                   1.393976
## 224      sample    dry                4.598399                   1.393976
## 225      sample    wet                4.598399                   1.393976
## 226      sample    dry                4.598399                   1.393976
## 227      sample    wet                4.598399                   1.393976
## 228      sample    dry                4.598399                   1.393976
## 229      sample    dry                4.598399                   1.393976
## 230      sample    wet                4.598399                   1.393976
## 231      sample    dry                4.598399                   1.393976
## 232      sample    wet                4.598399                   1.393976
## 233      sample    dry                4.598399                   1.393976
## 234      sample    wet                4.598399                   1.393976
## 235      sample    wet                4.598399                   1.393976
## 236      sample    wet                4.598399                   1.393976
## 237      sample    wet                4.598399                   1.393976
## 238      sample    dry                4.598399                   1.393976
## 239      sample    wet                4.598399                   1.393976
## 240      sample    dry                4.598399                   1.393976
## 241      sample    wet                4.598399                   1.393976
## 242      sample    dry                4.598399                   1.393976
## 243      sample    wet                4.598399                   1.393976
## 244      sample    dry                4.598399                   1.393976
## 245      sample    dry                4.598399                   1.393976
## 246      sample    wet                4.598399                   1.393976
## 247      sample    dry                4.598399                   1.393976
## 248      sample    wet                4.598399                   1.393976
## 249      sample    dry                4.598399                   1.393976
## 250      sample    wet                4.598399                   1.393976
## 251      sample    dry                4.598399                   1.393976
## 252      sample    wet                4.598399                   1.393976
## 253      sample    dry                4.598399                   1.393976
## 254      sample    dry                4.598399                   1.393976
## 255      sample    dry                4.598399                   1.393976
## 256      sample    dry                4.598399                   1.393976
## 257      sample    wet                4.598399                   1.393976
## 258      sample    wet                4.598399                   1.393976
## 259      sample    dry                4.598399                   1.393976
## 260      sample    dry                4.598399                   1.393976
## 261      sample    wet                4.598399                   1.393976
## 262      sample    wet                4.598399                   1.393976
## 263      sample    dry                4.598399                   1.393976
## 264      sample    dry                4.598399                   1.393976
## 265      sample    wet                4.598399                   1.393976
## 266      sample    wet                4.598399                   1.393976
## 267      sample    dry                1.000000                         NA
## 268      sample    wet                1.000000                         NA
## 269      sample    dry                1.000000                         NA
## 270      sample    wet                1.000000                         NA
## 271      sample    dry                1.000000                         NA
## 272      sample    wet                1.000000                         NA
## 273      sample    dry                1.000000                         NA
## 274      sample    wet                1.000000                         NA
## 275      sample    dry                1.000000                         NA
## 276      sample    wet                1.000000                         NA
## 277      sample    dry                1.000000                         NA
## 278      sample    wet                1.000000                         NA
## 279      sample    dry                1.000000                         NA
## 280      sample    dry                1.000000                         NA
## 281      sample    dry                1.000000                         NA
## 282      sample    wet                1.000000                         NA
## 283      sample    wet                1.000000                         NA
## 284      sample    dry                1.000000                         NA
## 285      sample    dry                1.000000                         NA
## 286      sample    dry                1.000000                         NA
## 287      sample    dry                1.000000                         NA
## 288      sample    wet                1.000000                         NA
## 289      sample    wet                1.000000                         NA
## 290      sample    dry                1.000000                         NA
## 291      sample    wet                1.000000                         NA
## 292      sample    wet                1.000000                         NA
## 293      sample    wet                1.000000                         NA
## 294      sample    wet                1.000000                         NA
## 295      sample    wet                1.000000                         NA
## 296      sample    dry                1.000000                         NA
## 297      sample    wet                1.000000                         NA
## 298      sample    dry                1.000000                         NA
## 299      sample    wet                1.000000                         NA
## 300      sample    dry                1.000000                         NA
## 301      sample    wet                1.000000                         NA
## 302      sample    dry                1.000000                         NA
## 303      sample    dry                1.000000                         NA
## 304      sample    wet                1.000000                         NA
## 305      sample    dry                1.000000                         NA
## 306      sample    wet                1.000000                         NA
## 307      sample    wet                1.000000                         NA
## 308      sample    dry                1.000000                         NA
## 309      sample    wet                1.000000                         NA
## 310      sample    dry                1.000000                         NA
## 311      sample    wet                1.000000                         NA
## 312      sample    dry                1.000000                         NA
## 313      sample    wet                1.000000                         NA
## 314      sample    dry                1.000000                         NA
## 315      sample    wet                1.000000                         NA
##     fiber.correction.factor.n particles.L.blank.corrected.fiber.corrected
## 1                          NA                                1.630000e+00
## 2                          NA                                1.650000e+00
## 3                          NA                                7.200000e+00
## 4                          NA                                5.630000e+00
## 5                          NA                                4.940000e+00
## 6                          NA                                8.430000e+00
## 7                          NA                                1.006000e+01
## 8                          NA                                2.310000e+00
## 9                          NA                                1.090000e+00
## 10                         NA                                1.784000e+01
## 11                         NA                                1.236000e+01
## 12                         NA                                2.441000e+01
## 13                         NA                                6.450000e-02
## 14                         NA                                1.150000e-02
## 15                         NA                                1.778000e-01
## 16                         NA                                4.210000e-02
## 17                         NA                                3.000000e-03
## 18                         NA                                5.400000e-03
## 19                         NA                                1.860000e-02
## 20                         NA                                2.330000e-02
## 21                         NA                                2.220000e-02
## 22                         NA                                7.780000e-02
## 23                         NA                                3.700000e-03
## 24                         NA                                5.500000e-03
## 25                         NA                                1.083000e-01
## 26                         NA                                1.593000e-01
## 27                         NA                                1.816000e-01
## 28                         NA                                7.500000e-03
## 29                         NA                                6.830000e-02
## 30                         NA                                          NA
## 31                         NA                                          NA
## 32                         NA                                          NA
## 33                         NA                                          NA
## 34                         NA                                          NA
## 35                         NA                                          NA
## 36                         NA                                          NA
## 37                         NA                                          NA
## 38                         NA                                          NA
## 39                         NA                                          NA
## 40                         NA                                          NA
## 41                         NA                                          NA
## 42                         NA                                          NA
## 43                         NA                                          NA
## 44                         NA                                          NA
## 45                         NA                                          NA
## 46                         NA                                          NA
## 47                         NA                                          NA
## 48                         NA                                          NA
## 49                         NA                                          NA
## 50                         NA                                          NA
## 51                         NA                                          NA
## 52                         NA                                          NA
## 53                         NA                                          NA
## 54                         NA                                          NA
## 55                         NA                                          NA
## 56                         NA                                          NA
## 57                         NA                                          NA
## 58                         NA                                          NA
## 59                         NA                                          NA
## 60                         NA                                          NA
## 61                         NA                                          NA
## 62                         NA                                          NA
## 63                         NA                                          NA
## 64                         NA                                          NA
## 65                         NA                                          NA
## 66                         NA                                          NA
## 67                         NA                                          NA
## 68                         NA                                          NA
## 69                         NA                                          NA
## 70                         NA                                          NA
## 71                         NA                                          NA
## 72                         NA                                          NA
## 73                         NA                                          NA
## 74                         NA                                          NA
## 75                         NA                                          NA
## 76                         NA                                          NA
## 77                         NA                                          NA
## 78                         NA                                          NA
## 79                         NA                                          NA
## 80                         NA                                          NA
## 81                         NA                                          NA
## 82                         NA                                          NA
## 83                         NA                                          NA
## 84                         NA                                          NA
## 85                         NA                                          NA
## 86                         NA                                          NA
## 87                         NA                                          NA
## 88                         NA                                          NA
## 89                         NA                                          NA
## 90                         NA                                          NA
## 91                         NA                                          NA
## 92                         NA                                          NA
## 93                         NA                                          NA
## 94                         NA                                          NA
## 95                         NA                                          NA
## 96                         NA                                          NA
## 97                         NA                                          NA
## 98                         NA                                          NA
## 99                         NA                                          NA
## 100                        NA                                          NA
## 101                        NA                                          NA
## 102                        NA                                          NA
## 103                        NA                                          NA
## 104                        NA                                          NA
## 105                        NA                                          NA
## 106                        NA                                          NA
## 107                        NA                                          NA
## 108                        NA                                          NA
## 109                        NA                                          NA
## 110                        NA                                          NA
## 111                        NA                                          NA
## 112                        NA                                          NA
## 113                        NA                                          NA
## 114                        NA                                          NA
## 115                        NA                                          NA
## 116                        NA                                          NA
## 117                        NA                                          NA
## 118                        NA                                          NA
## 119                        NA                                          NA
## 120                        NA                                          NA
## 121                        NA                                          NA
## 122                        NA                                          NA
## 123                        NA                                          NA
## 124                        NA                                          NA
## 125                        NA                                          NA
## 126                        NA                                          NA
## 127                        NA                                          NA
## 128                        NA                                          NA
## 129                        NA                                          NA
## 130                        NA                                          NA
## 131                        NA                                          NA
## 132                        NA                                          NA
## 133                        NA                                          NA
## 134                        NA                                          NA
## 135                        NA                                          NA
## 136                        NA                                          NA
## 137                        NA                                          NA
## 138                        NA                                          NA
## 139                        NA                                          NA
## 140                        NA                                          NA
## 141                        NA                                          NA
## 142                        NA                                          NA
## 143                        NA                                          NA
## 144                        NA                                          NA
## 145                        NA                                          NA
## 146                        NA                                          NA
## 147                        NA                                          NA
## 148                        NA                                          NA
## 149                        NA                                          NA
## 150                        NA                                          NA
## 151                        NA                                          NA
## 152                        NA                                          NA
## 153                        NA                                          NA
## 154                        NA                                          NA
## 155                        NA                                          NA
## 156                        NA                                          NA
## 157                        NA                                          NA
## 158                        NA                                          NA
## 159                        NA                                          NA
## 160                        NA                                          NA
## 161                        NA                                          NA
## 162                        NA                                          NA
## 163                        NA                                          NA
## 164                        NA                                          NA
## 165                        NA                                          NA
## 166                        NA                                          NA
## 167                        NA                                          NA
## 168                        NA                                          NA
## 169                        NA                                          NA
## 170                        NA                                          NA
## 171                        NA                                          NA
## 172                        NA                                          NA
## 173                        NA                                          NA
## 174                        NA                                          NA
## 175                        NA                                          NA
## 176                        NA                                          NA
## 177                        NA                                          NA
## 178                        NA                                          NA
## 179                        NA                                          NA
## 180                        NA                                          NA
## 181                        NA                                          NA
## 182                        NA                                          NA
## 183                        NA                                          NA
## 184                        NA                                          NA
## 185                        NA                                          NA
## 186                        NA                                          NA
## 187                        NA                                          NA
## 188                        NA                                          NA
## 189                        NA                                          NA
## 190                        NA                                          NA
## 191                        NA                                          NA
## 192                        NA                                          NA
## 193                        NA                                          NA
## 194                        NA                                          NA
## 195                        NA                                          NA
## 196                        NA                                          NA
## 197                        NA                                          NA
## 198                        NA                                          NA
## 199                        NA                                          NA
## 200                        NA                                          NA
## 201                        NA                                          NA
## 202                         9                                1.057632e-04
## 203                         9                                2.811461e-02
## 204                         9                                2.018697e-03
## 205                         9                                8.681777e-03
## 206                         9                                2.349782e-03
## 207                         9                                3.816671e-04
## 208                         9                                2.133657e-03
## 209                         9                                3.559161e-03
## 210                         9                                3.352233e-03
## 211                         9                                1.041537e-02
## 212                         9                                1.997085e-02
## 213                         9                                8.644990e-04
## 214                         9                                2.556296e-01
## 215                         9                                4.046591e-04
## 216                         9                                7.495391e-04
## 217                         9                                5.793983e-04
## 218                         9                                6.391775e-04
## 219                         9                                0.000000e+00
## 220                         9                                1.057632e-04
## 221                         9                                1.002451e-03
## 222                         9                                9.196798e-05
## 223                         9                                3.632735e-04
## 224                         9                                6.391775e-04
## 225                         9                                3.586751e-04
## 226                         9                                2.299200e-05
## 227                         9                                4.414463e-04
## 228                         9                                2.575103e-04
## 229                         9                                4.515628e-03
## 230                         9                                1.223174e-03
## 231                         9                                1.641628e-03
## 232                         9                                1.140403e-03
## 233                         9                                7.035551e-04
## 234                         9                                2.372774e-03
## 235                         9                                1.820966e-03
## 236                         9                                1.351929e-03
## 237                         9                                1.255363e-03
## 238                         9                                8.736958e-05
## 239                         9                                1.747392e-04
## 240                         9                                3.126911e-04
## 241                         9                                2.483136e-04
## 242                         9                                1.747392e-04
## 243                         9                                3.126911e-04
## 244                         9                                1.103616e-04
## 245                         9                                5.150207e-04
## 246                         9                                1.085222e-03
## 247                         9                                8.323102e-04
## 248                         9                                1.197883e-02
## 249                         9                                5.885951e-04
## 250                         9                                2.244019e-03
## 251                         9                                1.333076e-02
## 252                         9                                6.364184e-03
## 253                         9                                1.958918e-03
## 254                         9                                1.958918e-03
## 255                         9                                2.713055e-04
## 256                         9                                2.713055e-04
## 257                         9                                4.230527e-04
## 258                         9                                4.230527e-04
## 259                         9                                2.929180e-03
## 260                         9                                2.929180e-03
## 261                         9                                6.479144e-03
## 262                         9                                6.479144e-03
## 263                         9                                3.724703e-04
## 264                         9                                3.724703e-04
## 265                         9                                6.023903e-04
## 266                         9                                6.023903e-04
## 267                        NA                                3.465347e+00
## 268                        NA                                2.734878e+00
## 269                        NA                                7.433102e+00
## 270                        NA                                6.277464e-01
## 271                        NA                                1.950959e+00
## 272                        NA                                4.984424e+00
## 273                        NA                                2.325107e+00
## 274                        NA                                1.582779e+00
## 275                        NA                                2.703562e+00
## 276                        NA                                2.551020e+00
## 277                        NA                                6.578947e+00
## 278                        NA                                1.871102e+01
## 279                        NA                                3.000000e+00
## 280                        NA                                1.640420e+00
## 281                        NA                                8.671523e+00
## 282                        NA                                6.523157e-01
## 283                        NA                                0.000000e+00
## 284                        NA                                1.811594e+00
## 285                        NA                                7.095745e-01
## 286                        NA                                1.262626e+00
## 287                        NA                                3.664755e+00
## 288                        NA                                3.098500e+00
## 289                        NA                                1.279591e+00
## 290                        NA                                7.619048e+00
## 291                        NA                                2.412281e+00
## 292                        NA                                1.357323e+01
## 293                        NA                                2.383222e+00
## 294                        NA                                9.433962e-01
## 295                        NA                                3.570315e+01
## 296                        NA                                2.252599e+00
## 297                        NA                                2.202268e+00
## 298                        NA                                1.605652e+00
## 299                        NA                                4.269450e+00
## 300                        NA                                3.502069e+00
## 301                        NA                                1.876590e+01
## 302                        NA                                6.298450e+00
## 303                        NA                                9.980040e-01
## 304                        NA                                6.144393e+00
## 305                        NA                                3.346080e+00
## 306                        NA                                1.595745e+00
## 307                        NA                                2.666667e+00
## 308                        NA                                4.338395e+00
## 309                        NA                                9.931383e+00
## 310                        NA                                3.333333e+00
## 311                        NA                                2.833333e+00
## 312                        NA                                5.086072e+00
## 313                        NA                                5.243089e+00
## 314                        NA                                2.764613e+00
## 315                        NA                                4.427577e+00
##                   locationNew                matrix
## 1                     general                 Storm
## 2                     general                 Storm
## 3                     general                 Storm
## 4                     general                 Storm
## 5                     general                 Storm
## 6                     general                 Storm
## 7                     general                 Storm
## 8                     general                 Storm
## 9                     general                 Storm
## 10                    general                 Storm
## 11                    general                 Storm
## 12                    general                 Storm
## 13                    general                  WWTP
## 14                    general                  WWTP
## 15                    general                  WWTP
## 16                    general                  WWTP
## 17                    general                  WWTP
## 18                    general                  WWTP
## 19                    general                  WWTP
## 20                    general                  WWTP
## 21                    general                  WWTP
## 22                    general                  WWTP
## 23                    general                  WWTP
## 24                    general                  WWTP
## 25                    general                  WWTP
## 26                    general                  WWTP
## 27                    general                  WWTP
## 28                    general                  WWTP
## 29                    general                  WWTP
## 30            Lower South Bay                  Fish
## 31            Lower South Bay                  Fish
## 32            Lower South Bay                  Fish
## 33            Lower South Bay                  Fish
## 34            Lower South Bay                  Fish
## 35            Lower South Bay                  Fish
## 36            Lower South Bay                  Fish
## 37            Lower South Bay                  Fish
## 38            Lower South Bay                  Fish
## 39            Lower South Bay                  Fish
## 40            Lower South Bay                  Fish
## 41            Lower South Bay                  Fish
## 42            Lower South Bay                  Fish
## 43            Lower South Bay                  Fish
## 44                Tomales Bay                  Fish
## 45                Tomales Bay                  Fish
## 46                Tomales Bay                  Fish
## 47                Tomales Bay                  Fish
## 48                Tomales Bay                  Fish
## 49                Tomales Bay                  Fish
## 50                Tomales Bay                  Fish
## 51                Tomales Bay                  Fish
## 52                Tomales Bay                  Fish
## 53                Tomales Bay                  Fish
## 54                Tomales Bay                  Fish
## 55                Tomales Bay                  Fish
## 56                Tomales Bay                  Fish
## 57                Tomales Bay                  Fish
## 58                Tomales Bay                  Fish
## 59                Tomales Bay                  Fish
## 60                Tomales Bay                  Fish
## 61                Tomales Bay                  Fish
## 62                Tomales Bay                  Fish
## 63                Tomales Bay                  Fish
## 64                Tomales Bay                  Fish
## 65                Tomales Bay                  Fish
## 66                Tomales Bay                  Fish
## 67                Tomales Bay                  Fish
## 68                Tomales Bay                  Fish
## 69                Tomales Bay                  Fish
## 70                Tomales Bay                  Fish
## 71                Tomales Bay                  Fish
## 72                Tomales Bay                  Fish
## 73                Tomales Bay                  Fish
## 74                Central Bay                  Fish
## 75                Central Bay                  Fish
## 76                Central Bay                  Fish
## 77                Central Bay                  Fish
## 78                Central Bay                  Fish
## 79                Central Bay                  Fish
## 80                Central Bay                  Fish
## 81                Central Bay                  Fish
## 82                Central Bay                  Fish
## 83                Central Bay                  Fish
## 84                Central Bay                  Fish
## 85                Central Bay                  Fish
## 86                Central Bay                  Fish
## 87                Central Bay                  Fish
## 88                Central Bay                  Fish
## 89                Central Bay                  Fish
## 90                Central Bay                  Fish
## 91                Central Bay                  Fish
## 92                Central Bay                  Fish
## 93                Central Bay                  Fish
## 94                Central Bay                  Fish
## 95                Central Bay                  Fish
## 96                Central Bay                  Fish
## 97                Central Bay                  Fish
## 98                Central Bay                  Fish
## 99                Central Bay                  Fish
## 100               Central Bay                  Fish
## 101               Central Bay                  Fish
## 102               Central Bay                  Fish
## 103               Central Bay                  Fish
## 104               Central Bay                  Fish
## 105               Central Bay                  Fish
## 106               Central Bay                  Fish
## 107               Central Bay                  Fish
## 108               Central Bay                  Fish
## 109               Central Bay                  Fish
## 110               Central Bay                  Fish
## 111               Central Bay                  Fish
## 112                   general                  Fish
## 113                   general                  Fish
## 114                   general                  Fish
## 115                   general                  Fish
## 116                   general                  Fish
## 117                   general                  Fish
## 118                   general                  Fish
## 119                   general                  Fish
## 120                   general                  Fish
## 121                   general                  Fish
## 122                 South Bay                  Fish
## 123                 South Bay                  Fish
## 124                 South Bay                  Fish
## 125                 South Bay                  Fish
## 126                 South Bay                  Fish
## 127                 South Bay                  Fish
## 128                 South Bay                  Fish
## 129                 South Bay                  Fish
## 130                 South Bay                  Fish
## 131                 South Bay                  Fish
## 132                 South Bay                  Fish
## 133                 South Bay                  Fish
## 134                 South Bay                  Fish
## 135                 South Bay                  Fish
## 136                 South Bay                  Fish
## 137                 South Bay                  Fish
## 138                 South Bay                  Fish
## 139                 South Bay                  Fish
## 140                 South Bay                  Fish
## 141                 South Bay                  Fish
## 142               Central Bay                  Fish
## 143               Central Bay                  Fish
## 144               Central Bay                  Fish
## 145               Central Bay                  Fish
## 146               Central Bay                  Fish
## 147               Central Bay                  Fish
## 148               Central Bay                  Fish
## 149               Central Bay                  Fish
## 150               Central Bay                  Fish
## 151               Central Bay                  Fish
## 152               Central Bay                  Fish
## 153               Central Bay                  Fish
## 154               Central Bay                  Fish
## 155               Central Bay                  Fish
## 156               Central Bay                  Fish
## 157               Central Bay                  Fish
## 158               Central Bay                  Fish
## 159               Central Bay                  Fish
## 160               Central Bay                  Fish
## 161               Central Bay                  Fish
## 162                   general                  Fish
## 163                   general                  Fish
## 164                   general                  Fish
## 165                   general                  Fish
## 166                   general                  Fish
## 167                   general                  Fish
## 168                   general                  Fish
## 169                   general                  Fish
## 170                   general                  Fish
## 171                   general                  Fish
## 172               Tomales Bay                  Fish
## 173               Tomales Bay                  Fish
## 174               Tomales Bay                  Fish
## 175               Tomales Bay                  Fish
## 176               Tomales Bay                  Fish
## 177               Tomales Bay                  Fish
## 178               Tomales Bay                  Fish
## 179               Tomales Bay                  Fish
## 180               Tomales Bay                  Fish
## 181               Tomales Bay                  Fish
## 182                   general              Sediment
## 183               Central Bay              Sediment
## 184               Central Bay              Sediment
## 185               Central Bay              Sediment
## 186               Central Bay              Sediment
## 187           Lower South Bay              Sediment
## 188           Lower South Bay              Sediment
## 189           Lower South Bay              Sediment
## 190                   general              Sediment
## 191                 South Bay              Sediment
## 192                 South Bay              Sediment
## 193                 South Bay              Sediment
## 194                   general              Sediment
## 195                   general              Sediment
## 196                   general              Sediment
## 197                   general              Sediment
## 198                   general              Sediment
## 199                   general              Sediment
## 200               Tomales Bay              Sediment
## 201               Tomales Bay              Sediment
## 202               Central Bay Surface (Manta Trawl)
## 203               Central Bay Surface (Manta Trawl)
## 204               Central Bay Surface (Manta Trawl)
## 205               Central Bay Surface (Manta Trawl)
## 206               Central Bay Surface (Manta Trawl)
## 207               Central Bay Surface (Manta Trawl)
## 208               Central Bay Surface (Manta Trawl)
## 209               Central Bay Surface (Manta Trawl)
## 210               Central Bay Surface (Manta Trawl)
## 211               Central Bay Surface (Manta Trawl)
## 212               Central Bay Surface (Manta Trawl)
## 213               Central Bay Surface (Manta Trawl)
## 214               Central Bay Surface (Manta Trawl)
## 215 National Marine Sanctuary Surface (Manta Trawl)
## 216 National Marine Sanctuary Surface (Manta Trawl)
## 217 National Marine Sanctuary Surface (Manta Trawl)
## 218 National Marine Sanctuary Surface (Manta Trawl)
## 219 National Marine Sanctuary Surface (Manta Trawl)
## 220 National Marine Sanctuary Surface (Manta Trawl)
## 221 National Marine Sanctuary Surface (Manta Trawl)
## 222 National Marine Sanctuary Surface (Manta Trawl)
## 223 National Marine Sanctuary Surface (Manta Trawl)
## 224 National Marine Sanctuary Surface (Manta Trawl)
## 225 National Marine Sanctuary Surface (Manta Trawl)
## 226 National Marine Sanctuary Surface (Manta Trawl)
## 227 National Marine Sanctuary Surface (Manta Trawl)
## 228 National Marine Sanctuary Surface (Manta Trawl)
## 229           Lower South Bay Surface (Manta Trawl)
## 230           Lower South Bay Surface (Manta Trawl)
## 231           Lower South Bay Surface (Manta Trawl)
## 232           Lower South Bay Surface (Manta Trawl)
## 233           Lower South Bay Surface (Manta Trawl)
## 234           Lower South Bay Surface (Manta Trawl)
## 235 National Marine Sanctuary Surface (Manta Trawl)
## 236 National Marine Sanctuary Surface (Manta Trawl)
## 237 National Marine Sanctuary Surface (Manta Trawl)
## 238 National Marine Sanctuary Surface (Manta Trawl)
## 239 National Marine Sanctuary Surface (Manta Trawl)
## 240 National Marine Sanctuary Surface (Manta Trawl)
## 241 National Marine Sanctuary Surface (Manta Trawl)
## 242 National Marine Sanctuary Surface (Manta Trawl)
## 243 National Marine Sanctuary Surface (Manta Trawl)
## 244 National Marine Sanctuary Surface (Manta Trawl)
## 245                 South Bay Surface (Manta Trawl)
## 246                 South Bay Surface (Manta Trawl)
## 247                 South Bay Surface (Manta Trawl)
## 248                 South Bay Surface (Manta Trawl)
## 249                 South Bay Surface (Manta Trawl)
## 250                 South Bay Surface (Manta Trawl)
## 251                 South Bay Surface (Manta Trawl)
## 252                 South Bay Surface (Manta Trawl)
## 253                   general Surface (Manta Trawl)
## 254                   general Surface (Manta Trawl)
## 255                   general Surface (Manta Trawl)
## 256                   general Surface (Manta Trawl)
## 257                   general Surface (Manta Trawl)
## 258                   general Surface (Manta Trawl)
## 259                   general Surface (Manta Trawl)
## 260                   general Surface (Manta Trawl)
## 261                   general Surface (Manta Trawl)
## 262                   general Surface (Manta Trawl)
## 263                   general Surface (Manta Trawl)
## 264                   general Surface (Manta Trawl)
## 265                   general Surface (Manta Trawl)
## 266                   general Surface (Manta Trawl)
## 267               Central Bay     Surface (1L-grab)
## 268               Central Bay     Surface (1L-grab)
## 269               Central Bay     Surface (1L-grab)
## 270               Central Bay     Surface (1L-grab)
## 271               Central Bay     Surface (1L-grab)
## 272               Central Bay     Surface (1L-grab)
## 273               Central Bay     Surface (1L-grab)
## 274               Central Bay     Surface (1L-grab)
## 275               Central Bay     Surface (1L-grab)
## 276               Central Bay     Surface (1L-grab)
## 277               Central Bay     Surface (1L-grab)
## 278               Central Bay     Surface (1L-grab)
## 279 National Marine Sanctuary     Surface (1L-grab)
## 280 National Marine Sanctuary     Surface (1L-grab)
## 281 National Marine Sanctuary     Surface (1L-grab)
## 282 National Marine Sanctuary     Surface (1L-grab)
## 283 National Marine Sanctuary     Surface (1L-grab)
## 284 National Marine Sanctuary     Surface (1L-grab)
## 285 National Marine Sanctuary     Surface (1L-grab)
## 286 National Marine Sanctuary     Surface (1L-grab)
## 287 National Marine Sanctuary     Surface (1L-grab)
## 288           Lower South Bay     Surface (1L-grab)
## 289           Lower South Bay     Surface (1L-grab)
## 290           Lower South Bay     Surface (1L-grab)
## 291           Lower South Bay     Surface (1L-grab)
## 292 National Marine Sanctuary     Surface (1L-grab)
## 293 National Marine Sanctuary     Surface (1L-grab)
## 294 National Marine Sanctuary     Surface (1L-grab)
## 295 National Marine Sanctuary     Surface (1L-grab)
## 296 National Marine Sanctuary     Surface (1L-grab)
## 297 National Marine Sanctuary     Surface (1L-grab)
## 298 National Marine Sanctuary     Surface (1L-grab)
## 299 National Marine Sanctuary     Surface (1L-grab)
## 300 National Marine Sanctuary     Surface (1L-grab)
## 301 National Marine Sanctuary     Surface (1L-grab)
## 302 National Marine Sanctuary     Surface (1L-grab)
## 303                 South Bay     Surface (1L-grab)
## 304                 South Bay     Surface (1L-grab)
## 305                 South Bay     Surface (1L-grab)
## 306                 South Bay     Surface (1L-grab)
## 307                 South Bay     Surface (1L-grab)
## 308                 South Bay     Surface (1L-grab)
## 309                 South Bay     Surface (1L-grab)
## 310                   general     Surface (1L-grab)
## 311                   general     Surface (1L-grab)
## 312                   general     Surface (1L-grab)
## 313                   general     Surface (1L-grab)
## 314                   general     Surface (1L-grab)
## 315                   general     Surface (1L-grab)
##                                      locationMatrix proportion
## 1                                     general Storm  0.4675000
## 2                                     general Storm  0.4675000
## 3                                     general Storm  0.4675000
## 4                                     general Storm  0.4675000
## 5                                     general Storm  0.4675000
## 6                                     general Storm  0.4675000
## 7                                     general Storm  0.4675000
## 8                                     general Storm  0.4675000
## 9                                     general Storm  0.4675000
## 10                                    general Storm  0.4675000
## 11                                    general Storm  0.4675000
## 12                                    general Storm  0.4675000
## 13                                     general WWTP  0.2833333
## 14                                     general WWTP  0.2833333
## 15                                     general WWTP  0.2833333
## 16                                     general WWTP  0.2833333
## 17                                     general WWTP  0.2833333
## 18                                     general WWTP  0.2833333
## 19                                     general WWTP  0.2833333
## 20                                     general WWTP  0.2833333
## 21                                     general WWTP  0.2833333
## 22                                     general WWTP  0.2833333
## 23                                     general WWTP  0.2833333
## 24                                     general WWTP  0.2833333
## 25                                     general WWTP  0.2833333
## 26                                     general WWTP  0.2833333
## 27                                     general WWTP  0.2833333
## 28                                     general WWTP  0.2833333
## 29                                     general WWTP  0.2833333
## 30                             Lower South Bay Fish  0.1500000
## 31                             Lower South Bay Fish  0.1500000
## 32                             Lower South Bay Fish  0.1500000
## 33                             Lower South Bay Fish  0.1500000
## 34                             Lower South Bay Fish  0.1500000
## 35                             Lower South Bay Fish  0.1500000
## 36                             Lower South Bay Fish  0.1500000
## 37                             Lower South Bay Fish  0.1500000
## 38                             Lower South Bay Fish  0.1500000
## 39                             Lower South Bay Fish  0.1500000
## 40                             Lower South Bay Fish  0.1500000
## 41                             Lower South Bay Fish  0.1500000
## 42                             Lower South Bay Fish  0.1500000
## 43                             Lower South Bay Fish  0.1500000
## 44                                 Tomales Bay Fish  0.1300000
## 45                                 Tomales Bay Fish  0.1300000
## 46                                 Tomales Bay Fish  0.1300000
## 47                                 Tomales Bay Fish  0.1300000
## 48                                 Tomales Bay Fish  0.1300000
## 49                                 Tomales Bay Fish  0.1300000
## 50                                 Tomales Bay Fish  0.1300000
## 51                                 Tomales Bay Fish  0.1300000
## 52                                 Tomales Bay Fish  0.1300000
## 53                                 Tomales Bay Fish  0.1300000
## 54                                 Tomales Bay Fish  0.1300000
## 55                                 Tomales Bay Fish  0.1300000
## 56                                 Tomales Bay Fish  0.1300000
## 57                                 Tomales Bay Fish  0.1300000
## 58                                 Tomales Bay Fish  0.1300000
## 59                                 Tomales Bay Fish  0.1300000
## 60                                 Tomales Bay Fish  0.1300000
## 61                                 Tomales Bay Fish  0.1300000
## 62                                 Tomales Bay Fish  0.1300000
## 63                                 Tomales Bay Fish  0.1300000
## 64                                 Tomales Bay Fish  0.1300000
## 65                                 Tomales Bay Fish  0.1300000
## 66                                 Tomales Bay Fish  0.1300000
## 67                                 Tomales Bay Fish  0.1300000
## 68                                 Tomales Bay Fish  0.1300000
## 69                                 Tomales Bay Fish  0.1300000
## 70                                 Tomales Bay Fish  0.1300000
## 71                                 Tomales Bay Fish  0.1300000
## 72                                 Tomales Bay Fish  0.1300000
## 73                                 Tomales Bay Fish  0.1300000
## 74                                 Central Bay Fish  0.2100000
## 75                                 Central Bay Fish  0.2100000
## 76                                 Central Bay Fish  0.2100000
## 77                                 Central Bay Fish  0.2100000
## 78                                 Central Bay Fish  0.2100000
## 79                                 Central Bay Fish  0.2100000
## 80                                 Central Bay Fish  0.2100000
## 81                                 Central Bay Fish  0.2100000
## 82                                 Central Bay Fish  0.2100000
## 83                                 Central Bay Fish  0.2100000
## 84                                 Central Bay Fish  0.2100000
## 85                                 Central Bay Fish  0.2100000
## 86                                 Central Bay Fish  0.2100000
## 87                                 Central Bay Fish  0.2100000
## 88                                 Central Bay Fish  0.2100000
## 89                                 Central Bay Fish  0.2100000
## 90                                 Central Bay Fish  0.2100000
## 91                                 Central Bay Fish  0.2100000
## 92                                 Central Bay Fish  0.2100000
## 93                                 Central Bay Fish  0.2100000
## 94                                 Central Bay Fish  0.2100000
## 95                                 Central Bay Fish  0.2100000
## 96                                 Central Bay Fish  0.2100000
## 97                                 Central Bay Fish  0.2100000
## 98                                 Central Bay Fish  0.2100000
## 99                                 Central Bay Fish  0.2100000
## 100                                Central Bay Fish  0.2100000
## 101                                Central Bay Fish  0.2100000
## 102                                Central Bay Fish  0.2100000
## 103                                Central Bay Fish  0.2100000
## 104                                Central Bay Fish  0.2100000
## 105                                Central Bay Fish  0.2100000
## 106                                Central Bay Fish  0.2100000
## 107                                Central Bay Fish  0.2100000
## 108                                Central Bay Fish  0.2100000
## 109                                Central Bay Fish  0.2100000
## 110                                Central Bay Fish  0.2100000
## 111                                Central Bay Fish  0.2100000
## 112                                    general Fish  0.1775000
## 113                                    general Fish  0.1775000
## 114                                    general Fish  0.1775000
## 115                                    general Fish  0.1775000
## 116                                    general Fish  0.1775000
## 117                                    general Fish  0.1775000
## 118                                    general Fish  0.1775000
## 119                                    general Fish  0.1775000
## 120                                    general Fish  0.1775000
## 121                                    general Fish  0.1775000
## 122                                  South Bay Fish  0.2200000
## 123                                  South Bay Fish  0.2200000
## 124                                  South Bay Fish  0.2200000
## 125                                  South Bay Fish  0.2200000
## 126                                  South Bay Fish  0.2200000
## 127                                  South Bay Fish  0.2200000
## 128                                  South Bay Fish  0.2200000
## 129                                  South Bay Fish  0.2200000
## 130                                  South Bay Fish  0.2200000
## 131                                  South Bay Fish  0.2200000
## 132                                  South Bay Fish  0.2200000
## 133                                  South Bay Fish  0.2200000
## 134                                  South Bay Fish  0.2200000
## 135                                  South Bay Fish  0.2200000
## 136                                  South Bay Fish  0.2200000
## 137                                  South Bay Fish  0.2200000
## 138                                  South Bay Fish  0.2200000
## 139                                  South Bay Fish  0.2200000
## 140                                  South Bay Fish  0.2200000
## 141                                  South Bay Fish  0.2200000
## 142                                Central Bay Fish  0.2100000
## 143                                Central Bay Fish  0.2100000
## 144                                Central Bay Fish  0.2100000
## 145                                Central Bay Fish  0.2100000
## 146                                Central Bay Fish  0.2100000
## 147                                Central Bay Fish  0.2100000
## 148                                Central Bay Fish  0.2100000
## 149                                Central Bay Fish  0.2100000
## 150                                Central Bay Fish  0.2100000
## 151                                Central Bay Fish  0.2100000
## 152                                Central Bay Fish  0.2100000
## 153                                Central Bay Fish  0.2100000
## 154                                Central Bay Fish  0.2100000
## 155                                Central Bay Fish  0.2100000
## 156                                Central Bay Fish  0.2100000
## 157                                Central Bay Fish  0.2100000
## 158                                Central Bay Fish  0.2100000
## 159                                Central Bay Fish  0.2100000
## 160                                Central Bay Fish  0.2100000
## 161                                Central Bay Fish  0.2100000
## 162                                    general Fish  0.1775000
## 163                                    general Fish  0.1775000
## 164                                    general Fish  0.1775000
## 165                                    general Fish  0.1775000
## 166                                    general Fish  0.1775000
## 167                                    general Fish  0.1775000
## 168                                    general Fish  0.1775000
## 169                                    general Fish  0.1775000
## 170                                    general Fish  0.1775000
## 171                                    general Fish  0.1775000
## 172                                Tomales Bay Fish  0.1300000
## 173                                Tomales Bay Fish  0.1300000
## 174                                Tomales Bay Fish  0.1300000
## 175                                Tomales Bay Fish  0.1300000
## 176                                Tomales Bay Fish  0.1300000
## 177                                Tomales Bay Fish  0.1300000
## 178                                Tomales Bay Fish  0.1300000
## 179                                Tomales Bay Fish  0.1300000
## 180                                Tomales Bay Fish  0.1300000
## 181                                Tomales Bay Fish  0.1300000
## 182                                general Sediment  0.3800000
## 183                            Central Bay Sediment  0.4400000
## 184                            Central Bay Sediment  0.4400000
## 185                            Central Bay Sediment  0.4400000
## 186                            Central Bay Sediment  0.4400000
## 187                        Lower South Bay Sediment  0.5000000
## 188                        Lower South Bay Sediment  0.5000000
## 189                        Lower South Bay Sediment  0.5000000
## 190                                general Sediment  0.3800000
## 191                              South Bay Sediment  0.3900000
## 192                              South Bay Sediment  0.3900000
## 193                              South Bay Sediment  0.3900000
## 194                                general Sediment  0.3800000
## 195                                general Sediment  0.3800000
## 196                                general Sediment  0.3800000
## 197                                general Sediment  0.3800000
## 198                                general Sediment  0.3800000
## 199                                general Sediment  0.3800000
## 200                            Tomales Bay Sediment  0.1800000
## 201                            Tomales Bay Sediment  0.1800000
## 202               Central Bay Surface (Manta Trawl)  0.7321263
## 203               Central Bay Surface (Manta Trawl)  0.7321263
## 204               Central Bay Surface (Manta Trawl)  0.7321263
## 205               Central Bay Surface (Manta Trawl)  0.7321263
## 206               Central Bay Surface (Manta Trawl)  0.7321263
## 207               Central Bay Surface (Manta Trawl)  0.7321263
## 208               Central Bay Surface (Manta Trawl)  0.7321263
## 209               Central Bay Surface (Manta Trawl)  0.7321263
## 210               Central Bay Surface (Manta Trawl)  0.7321263
## 211               Central Bay Surface (Manta Trawl)  0.7321263
## 212               Central Bay Surface (Manta Trawl)  0.7321263
## 213               Central Bay Surface (Manta Trawl)  0.7321263
## 214               Central Bay Surface (Manta Trawl)  0.7321263
## 215 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 216 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 217 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 218 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 219 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 220 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 221 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 222 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 223 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 224 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 225 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 226 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 227 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 228 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 229           Lower South Bay Surface (Manta Trawl)  0.7321263
## 230           Lower South Bay Surface (Manta Trawl)  0.7321263
## 231           Lower South Bay Surface (Manta Trawl)  0.7321263
## 232           Lower South Bay Surface (Manta Trawl)  0.7321263
## 233           Lower South Bay Surface (Manta Trawl)  0.7321263
## 234           Lower South Bay Surface (Manta Trawl)  0.7321263
## 235 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 236 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 237 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 238 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 239 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 240 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 241 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 242 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 243 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 244 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 245                 South Bay Surface (Manta Trawl)  0.7321263
## 246                 South Bay Surface (Manta Trawl)  0.7321263
## 247                 South Bay Surface (Manta Trawl)  0.7321263
## 248                 South Bay Surface (Manta Trawl)  0.7321263
## 249                 South Bay Surface (Manta Trawl)  0.7321263
## 250                 South Bay Surface (Manta Trawl)  0.7321263
## 251                 South Bay Surface (Manta Trawl)  0.7321263
## 252                 South Bay Surface (Manta Trawl)  0.7321263
## 253                   general Surface (Manta Trawl)  0.7321263
## 254                   general Surface (Manta Trawl)  0.7321263
## 255                   general Surface (Manta Trawl)  0.7321263
## 256                   general Surface (Manta Trawl)  0.7321263
## 257                   general Surface (Manta Trawl)  0.7321263
## 258                   general Surface (Manta Trawl)  0.7321263
## 259                   general Surface (Manta Trawl)  0.7321263
## 260                   general Surface (Manta Trawl)  0.7321263
## 261                   general Surface (Manta Trawl)  0.7321263
## 262                   general Surface (Manta Trawl)  0.7321263
## 263                   general Surface (Manta Trawl)  0.7321263
## 264                   general Surface (Manta Trawl)  0.7321263
## 265                   general Surface (Manta Trawl)  0.7321263
## 266                   general Surface (Manta Trawl)  0.7321263
## 267                   Central Bay Surface (1L-grab)  0.6200000
## 268                   Central Bay Surface (1L-grab)  0.6200000
## 269                   Central Bay Surface (1L-grab)  0.6200000
## 270                   Central Bay Surface (1L-grab)  0.6200000
## 271                   Central Bay Surface (1L-grab)  0.6200000
## 272                   Central Bay Surface (1L-grab)  0.6200000
## 273                   Central Bay Surface (1L-grab)  0.6200000
## 274                   Central Bay Surface (1L-grab)  0.6200000
## 275                   Central Bay Surface (1L-grab)  0.6200000
## 276                   Central Bay Surface (1L-grab)  0.6200000
## 277                   Central Bay Surface (1L-grab)  0.6200000
## 278                   Central Bay Surface (1L-grab)  0.6200000
## 279     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 280     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 281     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 282     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 283     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 284     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 285     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 286     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 287     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 288               Lower South Bay Surface (1L-grab)  0.7200000
## 289               Lower South Bay Surface (1L-grab)  0.7200000
## 290               Lower South Bay Surface (1L-grab)  0.7200000
## 291               Lower South Bay Surface (1L-grab)  0.7200000
## 292     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 293     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 294     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 295     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 296     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 297     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 298     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 299     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 300     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 301     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 302     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 303                     South Bay Surface (1L-grab)  0.4500000
## 304                     South Bay Surface (1L-grab)  0.4500000
## 305                     South Bay Surface (1L-grab)  0.4500000
## 306                     South Bay Surface (1L-grab)  0.4500000
## 307                     South Bay Surface (1L-grab)  0.4500000
## 308                     South Bay Surface (1L-grab)  0.4500000
## 309                     South Bay Surface (1L-grab)  0.4500000
## 310                       general Surface (1L-grab)  0.4900000
## 311                       general Surface (1L-grab)  0.4900000
## 312                       general Surface (1L-grab)  0.4900000
## 313                       general Surface (1L-grab)  0.4900000
## 314                       general Surface (1L-grab)  0.4900000
## 315                       general Surface (1L-grab)  0.4900000
##     proportion.upper95 proportion.lower95 proportion.sd proportion.n
## 1                   NA                 NA            NA           NA
## 2                   NA                 NA            NA           NA
## 3                   NA                 NA            NA           NA
## 4                   NA                 NA            NA           NA
## 5                   NA                 NA            NA           NA
## 6                   NA                 NA            NA           NA
## 7                   NA                 NA            NA           NA
## 8                   NA                 NA            NA           NA
## 9                   NA                 NA            NA           NA
## 10                  NA                 NA            NA           NA
## 11                  NA                 NA            NA           NA
## 12                  NA                 NA            NA           NA
## 13                  NA                 NA            NA           NA
## 14                  NA                 NA            NA           NA
## 15                  NA                 NA            NA           NA
## 16                  NA                 NA            NA           NA
## 17                  NA                 NA            NA           NA
## 18                  NA                 NA            NA           NA
## 19                  NA                 NA            NA           NA
## 20                  NA                 NA            NA           NA
## 21                  NA                 NA            NA           NA
## 22                  NA                 NA            NA           NA
## 23                  NA                 NA            NA           NA
## 24                  NA                 NA            NA           NA
## 25                  NA                 NA            NA           NA
## 26                  NA                 NA            NA           NA
## 27                  NA                 NA            NA           NA
## 28                  NA                 NA            NA           NA
## 29                  NA                 NA            NA           NA
## 30                  NA                 NA            NA           NA
## 31                  NA                 NA            NA           NA
## 32                  NA                 NA            NA           NA
## 33                  NA                 NA            NA           NA
## 34                  NA                 NA            NA           NA
## 35                  NA                 NA            NA           NA
## 36                  NA                 NA            NA           NA
## 37                  NA                 NA            NA           NA
## 38                  NA                 NA            NA           NA
## 39                  NA                 NA            NA           NA
## 40                  NA                 NA            NA           NA
## 41                  NA                 NA            NA           NA
## 42                  NA                 NA            NA           NA
## 43                  NA                 NA            NA           NA
## 44                  NA                 NA            NA           NA
## 45                  NA                 NA            NA           NA
## 46                  NA                 NA            NA           NA
## 47                  NA                 NA            NA           NA
## 48                  NA                 NA            NA           NA
## 49                  NA                 NA            NA           NA
## 50                  NA                 NA            NA           NA
## 51                  NA                 NA            NA           NA
## 52                  NA                 NA            NA           NA
## 53                  NA                 NA            NA           NA
## 54                  NA                 NA            NA           NA
## 55                  NA                 NA            NA           NA
## 56                  NA                 NA            NA           NA
## 57                  NA                 NA            NA           NA
## 58                  NA                 NA            NA           NA
## 59                  NA                 NA            NA           NA
## 60                  NA                 NA            NA           NA
## 61                  NA                 NA            NA           NA
## 62                  NA                 NA            NA           NA
## 63                  NA                 NA            NA           NA
## 64                  NA                 NA            NA           NA
## 65                  NA                 NA            NA           NA
## 66                  NA                 NA            NA           NA
## 67                  NA                 NA            NA           NA
## 68                  NA                 NA            NA           NA
## 69                  NA                 NA            NA           NA
## 70                  NA                 NA            NA           NA
## 71                  NA                 NA            NA           NA
## 72                  NA                 NA            NA           NA
## 73                  NA                 NA            NA           NA
## 74                  NA                 NA            NA           NA
## 75                  NA                 NA            NA           NA
## 76                  NA                 NA            NA           NA
## 77                  NA                 NA            NA           NA
## 78                  NA                 NA            NA           NA
## 79                  NA                 NA            NA           NA
## 80                  NA                 NA            NA           NA
## 81                  NA                 NA            NA           NA
## 82                  NA                 NA            NA           NA
## 83                  NA                 NA            NA           NA
## 84                  NA                 NA            NA           NA
## 85                  NA                 NA            NA           NA
## 86                  NA                 NA            NA           NA
## 87                  NA                 NA            NA           NA
## 88                  NA                 NA            NA           NA
## 89                  NA                 NA            NA           NA
## 90                  NA                 NA            NA           NA
## 91                  NA                 NA            NA           NA
## 92                  NA                 NA            NA           NA
## 93                  NA                 NA            NA           NA
## 94                  NA                 NA            NA           NA
## 95                  NA                 NA            NA           NA
## 96                  NA                 NA            NA           NA
## 97                  NA                 NA            NA           NA
## 98                  NA                 NA            NA           NA
## 99                  NA                 NA            NA           NA
## 100                 NA                 NA            NA           NA
## 101                 NA                 NA            NA           NA
## 102                 NA                 NA            NA           NA
## 103                 NA                 NA            NA           NA
## 104                 NA                 NA            NA           NA
## 105                 NA                 NA            NA           NA
## 106                 NA                 NA            NA           NA
## 107                 NA                 NA            NA           NA
## 108                 NA                 NA            NA           NA
## 109                 NA                 NA            NA           NA
## 110                 NA                 NA            NA           NA
## 111                 NA                 NA            NA           NA
## 112                 NA                 NA            NA           NA
## 113                 NA                 NA            NA           NA
## 114                 NA                 NA            NA           NA
## 115                 NA                 NA            NA           NA
## 116                 NA                 NA            NA           NA
## 117                 NA                 NA            NA           NA
## 118                 NA                 NA            NA           NA
## 119                 NA                 NA            NA           NA
## 120                 NA                 NA            NA           NA
## 121                 NA                 NA            NA           NA
## 122                 NA                 NA            NA           NA
## 123                 NA                 NA            NA           NA
## 124                 NA                 NA            NA           NA
## 125                 NA                 NA            NA           NA
## 126                 NA                 NA            NA           NA
## 127                 NA                 NA            NA           NA
## 128                 NA                 NA            NA           NA
## 129                 NA                 NA            NA           NA
## 130                 NA                 NA            NA           NA
## 131                 NA                 NA            NA           NA
## 132                 NA                 NA            NA           NA
## 133                 NA                 NA            NA           NA
## 134                 NA                 NA            NA           NA
## 135                 NA                 NA            NA           NA
## 136                 NA                 NA            NA           NA
## 137                 NA                 NA            NA           NA
## 138                 NA                 NA            NA           NA
## 139                 NA                 NA            NA           NA
## 140                 NA                 NA            NA           NA
## 141                 NA                 NA            NA           NA
## 142                 NA                 NA            NA           NA
## 143                 NA                 NA            NA           NA
## 144                 NA                 NA            NA           NA
## 145                 NA                 NA            NA           NA
## 146                 NA                 NA            NA           NA
## 147                 NA                 NA            NA           NA
## 148                 NA                 NA            NA           NA
## 149                 NA                 NA            NA           NA
## 150                 NA                 NA            NA           NA
## 151                 NA                 NA            NA           NA
## 152                 NA                 NA            NA           NA
## 153                 NA                 NA            NA           NA
## 154                 NA                 NA            NA           NA
## 155                 NA                 NA            NA           NA
## 156                 NA                 NA            NA           NA
## 157                 NA                 NA            NA           NA
## 158                 NA                 NA            NA           NA
## 159                 NA                 NA            NA           NA
## 160                 NA                 NA            NA           NA
## 161                 NA                 NA            NA           NA
## 162                 NA                 NA            NA           NA
## 163                 NA                 NA            NA           NA
## 164                 NA                 NA            NA           NA
## 165                 NA                 NA            NA           NA
## 166                 NA                 NA            NA           NA
## 167                 NA                 NA            NA           NA
## 168                 NA                 NA            NA           NA
## 169                 NA                 NA            NA           NA
## 170                 NA                 NA            NA           NA
## 171                 NA                 NA            NA           NA
## 172                 NA                 NA            NA           NA
## 173                 NA                 NA            NA           NA
## 174                 NA                 NA            NA           NA
## 175                 NA                 NA            NA           NA
## 176                 NA                 NA            NA           NA
## 177                 NA                 NA            NA           NA
## 178                 NA                 NA            NA           NA
## 179                 NA                 NA            NA           NA
## 180                 NA                 NA            NA           NA
## 181                 NA                 NA            NA           NA
## 182                 NA                 NA            NA           NA
## 183                 NA                 NA            NA           NA
## 184                 NA                 NA            NA           NA
## 185                 NA                 NA            NA           NA
## 186                 NA                 NA            NA           NA
## 187                 NA                 NA            NA           NA
## 188                 NA                 NA            NA           NA
## 189                 NA                 NA            NA           NA
## 190                 NA                 NA            NA           NA
## 191                 NA                 NA            NA           NA
## 192                 NA                 NA            NA           NA
## 193                 NA                 NA            NA           NA
## 194                 NA                 NA            NA           NA
## 195                 NA                 NA            NA           NA
## 196                 NA                 NA            NA           NA
## 197                 NA                 NA            NA           NA
## 198                 NA                 NA            NA           NA
## 199                 NA                 NA            NA           NA
## 200                 NA                 NA            NA           NA
## 201                 NA                 NA            NA           NA
## 202          0.7929707          0.6712818      0.236417           58
## 203          0.7929707          0.6712818      0.236417           58
## 204          0.7929707          0.6712818      0.236417           58
## 205          0.7929707          0.6712818      0.236417           58
## 206          0.7929707          0.6712818      0.236417           58
## 207          0.7929707          0.6712818      0.236417           58
## 208          0.7929707          0.6712818      0.236417           58
## 209          0.7929707          0.6712818      0.236417           58
## 210          0.7929707          0.6712818      0.236417           58
## 211          0.7929707          0.6712818      0.236417           58
## 212          0.7929707          0.6712818      0.236417           58
## 213          0.7929707          0.6712818      0.236417           58
## 214          0.7929707          0.6712818      0.236417           58
## 215          0.7929707          0.6712818      0.236417           58
## 216          0.7929707          0.6712818      0.236417           58
## 217          0.7929707          0.6712818      0.236417           58
## 218          0.7929707          0.6712818      0.236417           58
## 219          0.7929707          0.6712818      0.236417           58
## 220          0.7929707          0.6712818      0.236417           58
## 221          0.7929707          0.6712818      0.236417           58
## 222          0.7929707          0.6712818      0.236417           58
## 223          0.7929707          0.6712818      0.236417           58
## 224          0.7929707          0.6712818      0.236417           58
## 225          0.7929707          0.6712818      0.236417           58
## 226          0.7929707          0.6712818      0.236417           58
## 227          0.7929707          0.6712818      0.236417           58
## 228          0.7929707          0.6712818      0.236417           58
## 229          0.7929707          0.6712818      0.236417           58
## 230          0.7929707          0.6712818      0.236417           58
## 231          0.7929707          0.6712818      0.236417           58
## 232          0.7929707          0.6712818      0.236417           58
## 233          0.7929707          0.6712818      0.236417           58
## 234          0.7929707          0.6712818      0.236417           58
## 235          0.7929707          0.6712818      0.236417           58
## 236          0.7929707          0.6712818      0.236417           58
## 237          0.7929707          0.6712818      0.236417           58
## 238          0.7929707          0.6712818      0.236417           58
## 239          0.7929707          0.6712818      0.236417           58
## 240          0.7929707          0.6712818      0.236417           58
## 241          0.7929707          0.6712818      0.236417           58
## 242          0.7929707          0.6712818      0.236417           58
## 243          0.7929707          0.6712818      0.236417           58
## 244          0.7929707          0.6712818      0.236417           58
## 245          0.7929707          0.6712818      0.236417           58
## 246          0.7929707          0.6712818      0.236417           58
## 247          0.7929707          0.6712818      0.236417           58
## 248          0.7929707          0.6712818      0.236417           58
## 249          0.7929707          0.6712818      0.236417           58
## 250          0.7929707          0.6712818      0.236417           58
## 251          0.7929707          0.6712818      0.236417           58
## 252          0.7929707          0.6712818      0.236417           58
## 253          0.7929707          0.6712818      0.236417           58
## 254          0.7929707          0.6712818      0.236417           58
## 255          0.7929707          0.6712818      0.236417           58
## 256          0.7929707          0.6712818      0.236417           58
## 257          0.7929707          0.6712818      0.236417           58
## 258          0.7929707          0.6712818      0.236417           58
## 259          0.7929707          0.6712818      0.236417           58
## 260          0.7929707          0.6712818      0.236417           58
## 261          0.7929707          0.6712818      0.236417           58
## 262          0.7929707          0.6712818      0.236417           58
## 263          0.7929707          0.6712818      0.236417           58
## 264          0.7929707          0.6712818      0.236417           58
## 265          0.7929707          0.6712818      0.236417           58
## 266          0.7929707          0.6712818      0.236417           58
## 267                 NA                 NA            NA           NA
## 268                 NA                 NA            NA           NA
## 269                 NA                 NA            NA           NA
## 270                 NA                 NA            NA           NA
## 271                 NA                 NA            NA           NA
## 272                 NA                 NA            NA           NA
## 273                 NA                 NA            NA           NA
## 274                 NA                 NA            NA           NA
## 275                 NA                 NA            NA           NA
## 276                 NA                 NA            NA           NA
## 277                 NA                 NA            NA           NA
## 278                 NA                 NA            NA           NA
## 279                 NA                 NA            NA           NA
## 280                 NA                 NA            NA           NA
## 281                 NA                 NA            NA           NA
## 282                 NA                 NA            NA           NA
## 283                 NA                 NA            NA           NA
## 284                 NA                 NA            NA           NA
## 285                 NA                 NA            NA           NA
## 286                 NA                 NA            NA           NA
## 287                 NA                 NA            NA           NA
## 288                 NA                 NA            NA           NA
## 289                 NA                 NA            NA           NA
## 290                 NA                 NA            NA           NA
## 291                 NA                 NA            NA           NA
## 292                 NA                 NA            NA           NA
## 293                 NA                 NA            NA           NA
## 294                 NA                 NA            NA           NA
## 295                 NA                 NA            NA           NA
## 296                 NA                 NA            NA           NA
## 297                 NA                 NA            NA           NA
## 298                 NA                 NA            NA           NA
## 299                 NA                 NA            NA           NA
## 300                 NA                 NA            NA           NA
## 301                 NA                 NA            NA           NA
## 302                 NA                 NA            NA           NA
## 303                 NA                 NA            NA           NA
## 304                 NA                 NA            NA           NA
## 305                 NA                 NA            NA           NA
## 306                 NA                 NA            NA           NA
## 307                 NA                 NA            NA           NA
## 308                 NA                 NA            NA           NA
## 309                 NA                 NA            NA           NA
## 310                 NA                 NA            NA           NA
## 311                 NA                 NA            NA           NA
## 312                 NA                 NA            NA           NA
## 313                 NA                 NA            NA           NA
## 314                 NA                 NA            NA           NA
## 315                 NA                 NA            NA           NA
##     particles.L.blank.corrected.particle.corrected
## 1                                     7.620250e-01
## 2                                     7.713750e-01
## 3                                     3.366000e+00
## 4                                     2.632025e+00
## 5                                     2.309450e+00
## 6                                     3.941025e+00
## 7                                     4.703050e+00
## 8                                     1.079925e+00
## 9                                     5.095750e-01
## 10                                    8.340200e+00
## 11                                    5.778300e+00
## 12                                    1.141168e+01
## 13                                    1.827500e-02
## 14                                    3.258333e-03
## 15                                    5.037667e-02
## 16                                    1.192833e-02
## 17                                    8.500000e-04
## 18                                    1.530000e-03
## 19                                    5.270000e-03
## 20                                    6.601667e-03
## 21                                    6.290000e-03
## 22                                    2.204333e-02
## 23                                    1.048333e-03
## 24                                    1.558333e-03
## 25                                    3.068500e-02
## 26                                    4.513500e-02
## 27                                    5.145333e-02
## 28                                    2.125000e-03
## 29                                    1.935167e-02
## 30                                              NA
## 31                                              NA
## 32                                              NA
## 33                                              NA
## 34                                              NA
## 35                                              NA
## 36                                              NA
## 37                                              NA
## 38                                              NA
## 39                                              NA
## 40                                              NA
## 41                                              NA
## 42                                              NA
## 43                                              NA
## 44                                              NA
## 45                                              NA
## 46                                              NA
## 47                                              NA
## 48                                              NA
## 49                                              NA
## 50                                              NA
## 51                                              NA
## 52                                              NA
## 53                                              NA
## 54                                              NA
## 55                                              NA
## 56                                              NA
## 57                                              NA
## 58                                              NA
## 59                                              NA
## 60                                              NA
## 61                                              NA
## 62                                              NA
## 63                                              NA
## 64                                              NA
## 65                                              NA
## 66                                              NA
## 67                                              NA
## 68                                              NA
## 69                                              NA
## 70                                              NA
## 71                                              NA
## 72                                              NA
## 73                                              NA
## 74                                              NA
## 75                                              NA
## 76                                              NA
## 77                                              NA
## 78                                              NA
## 79                                              NA
## 80                                              NA
## 81                                              NA
## 82                                              NA
## 83                                              NA
## 84                                              NA
## 85                                              NA
## 86                                              NA
## 87                                              NA
## 88                                              NA
## 89                                              NA
## 90                                              NA
## 91                                              NA
## 92                                              NA
## 93                                              NA
## 94                                              NA
## 95                                              NA
## 96                                              NA
## 97                                              NA
## 98                                              NA
## 99                                              NA
## 100                                             NA
## 101                                             NA
## 102                                             NA
## 103                                             NA
## 104                                             NA
## 105                                             NA
## 106                                             NA
## 107                                             NA
## 108                                             NA
## 109                                             NA
## 110                                             NA
## 111                                             NA
## 112                                             NA
## 113                                             NA
## 114                                             NA
## 115                                             NA
## 116                                             NA
## 117                                             NA
## 118                                             NA
## 119                                             NA
## 120                                             NA
## 121                                             NA
## 122                                             NA
## 123                                             NA
## 124                                             NA
## 125                                             NA
## 126                                             NA
## 127                                             NA
## 128                                             NA
## 129                                             NA
## 130                                             NA
## 131                                             NA
## 132                                             NA
## 133                                             NA
## 134                                             NA
## 135                                             NA
## 136                                             NA
## 137                                             NA
## 138                                             NA
## 139                                             NA
## 140                                             NA
## 141                                             NA
## 142                                             NA
## 143                                             NA
## 144                                             NA
## 145                                             NA
## 146                                             NA
## 147                                             NA
## 148                                             NA
## 149                                             NA
## 150                                             NA
## 151                                             NA
## 152                                             NA
## 153                                             NA
## 154                                             NA
## 155                                             NA
## 156                                             NA
## 157                                             NA
## 158                                             NA
## 159                                             NA
## 160                                             NA
## 161                                             NA
## 162                                             NA
## 163                                             NA
## 164                                             NA
## 165                                             NA
## 166                                             NA
## 167                                             NA
## 168                                             NA
## 169                                             NA
## 170                                             NA
## 171                                             NA
## 172                                             NA
## 173                                             NA
## 174                                             NA
## 175                                             NA
## 176                                             NA
## 177                                             NA
## 178                                             NA
## 179                                             NA
## 180                                             NA
## 181                                             NA
## 182                                             NA
## 183                                             NA
## 184                                             NA
## 185                                             NA
## 186                                             NA
## 187                                             NA
## 188                                             NA
## 189                                             NA
## 190                                             NA
## 191                                             NA
## 192                                             NA
## 193                                             NA
## 194                                             NA
## 195                                             NA
## 196                                             NA
## 197                                             NA
## 198                                             NA
## 199                                             NA
## 200                                             NA
## 201                                             NA
## 202                                   1.683890e-05
## 203                                   4.476220e-03
## 204                                   3.214034e-04
## 205                                   1.382254e-03
## 206                                   3.741165e-04
## 207                                   6.076648e-05
## 208                                   3.397066e-04
## 209                                   5.666657e-04
## 210                                   5.337200e-04
## 211                                   1.658266e-03
## 212                                   3.179624e-03
## 213                                   1.376397e-04
## 214                                   4.069963e-02
## 215                                   6.442711e-05
## 216                                   1.193366e-04
## 217                                   9.224791e-05
## 218                                   1.017655e-04
## 219                                   0.000000e+00
## 220                                   1.683890e-05
## 221                                   1.596035e-04
## 222                                   1.464253e-05
## 223                                   5.783797e-05
## 224                                   1.017655e-04
## 225                                   5.710585e-05
## 226                                   3.660631e-06
## 227                                   7.028412e-05
## 228                                   4.099907e-05
## 229                                   7.189480e-04
## 230                                   1.947456e-04
## 231                                   2.613691e-04
## 232                                   1.815673e-04
## 233                                   1.120153e-04
## 234                                   3.777771e-04
## 235                                   2.899220e-04
## 236                                   2.152451e-04
## 237                                   1.998705e-04
## 238                                   1.391040e-05
## 239                                   2.782080e-05
## 240                                   4.978459e-05
## 241                                   3.953482e-05
## 242                                   2.782080e-05
## 243                                   4.978459e-05
## 244                                   1.757103e-05
## 245                                   8.199814e-05
## 246                                   1.727818e-04
## 247                                   1.325149e-04
## 248                                   1.907189e-03
## 249                                   9.371216e-05
## 250                                   3.572776e-04
## 251                                   2.122434e-03
## 252                                   1.013263e-03
## 253                                   3.118858e-04
## 254                                   3.118858e-04
## 255                                   4.319545e-05
## 256                                   4.319545e-05
## 257                                   6.735562e-05
## 258                                   6.735562e-05
## 259                                   4.663644e-04
## 260                                   4.663644e-04
## 261                                   1.031566e-03
## 262                                   1.031566e-03
## 263                                   5.930223e-05
## 264                                   5.930223e-05
## 265                                   9.590854e-05
## 266                                   9.590854e-05
## 267                                   2.148515e+00
## 268                                   1.695624e+00
## 269                                   4.608523e+00
## 270                                   3.892028e-01
## 271                                   1.209595e+00
## 272                                   3.090343e+00
## 273                                   1.441567e+00
## 274                                   9.813232e-01
## 275                                   1.676209e+00
## 276                                   1.581633e+00
## 277                                   4.078947e+00
## 278                                   1.160083e+01
## 279                                   1.020000e+00
## 280                                   5.577428e-01
## 281                                   2.948318e+00
## 282                                   2.217873e-01
## 283                                   0.000000e+00
## 284                                   6.159420e-01
## 285                                   2.412553e-01
## 286                                   4.292929e-01
## 287                                   1.246017e+00
## 288                                   2.230920e+00
## 289                                   9.213052e-01
## 290                                   5.485714e+00
## 291                                   1.736842e+00
## 292                                   4.614899e+00
## 293                                   8.102955e-01
## 294                                   3.207547e-01
## 295                                   1.213907e+01
## 296                                   7.658836e-01
## 297                                   7.487713e-01
## 298                                   5.459216e-01
## 299                                   1.451613e+00
## 300                                   1.190704e+00
## 301                                   6.380407e+00
## 302                                   2.141473e+00
## 303                                   4.491018e-01
## 304                                   2.764977e+00
## 305                                   1.505736e+00
## 306                                   7.180851e-01
## 307                                   1.200000e+00
## 308                                   1.952278e+00
## 309                                   4.469122e+00
## 310                                   1.633333e+00
## 311                                   1.388333e+00
## 312                                   2.492175e+00
## 313                                   2.569113e+00
## 314                                   1.354660e+00
## 315                                   2.169513e+00
##     particles.fish.blank.corrected.particle.corrected
## 1                                                  NA
## 2                                                  NA
## 3                                                  NA
## 4                                                  NA
## 5                                                  NA
## 6                                                  NA
## 7                                                  NA
## 8                                                  NA
## 9                                                  NA
## 10                                                 NA
## 11                                                 NA
## 12                                                 NA
## 13                                                 NA
## 14                                                 NA
## 15                                                 NA
## 16                                                 NA
## 17                                                 NA
## 18                                                 NA
## 19                                                 NA
## 20                                                 NA
## 21                                                 NA
## 22                                                 NA
## 23                                                 NA
## 24                                                 NA
## 25                                                 NA
## 26                                                 NA
## 27                                                 NA
## 28                                                 NA
## 29                                                 NA
## 30                                           3.640500
## 31                                           0.990000
## 32                                           0.130500
## 33                                           0.150000
## 34                                           0.139500
## 35                                           0.529500
## 36                                           0.360000
## 37                                           6.760500
## 38                                           1.200000
## 39                                           1.750500
## 40                                           0.859500
## 41                                           0.880500
## 42                                           2.170500
## 43                                           0.270000
## 44                                           0.000000
## 45                                           0.000000
## 46                                           0.224900
## 47                                           0.016900
## 48                                           0.234000
## 49                                           0.130000
## 50                                           0.711100
## 51                                           0.503100
## 52                                           0.962000
## 53                                           0.780000
## 54                                           0.711100
## 55                                           0.468000
## 56                                           0.000000
## 57                                           0.260000
## 58                                           0.347100
## 59                                           0.208000
## 60                                           0.146900
## 61                                           0.208000
## 62                                           0.208000
## 63                                           0.113100
## 64                                           0.822900
## 65                                           0.016900
## 66                                           2.002000
## 67                                           1.465100
## 68                                           1.482000
## 69                                           0.425100
## 70                                           1.472900
## 71                                           0.243100
## 72                                           0.312000
## 73                                           0.130000
## 74                                           2.337300
## 75                                           1.904700
## 76                                           0.825300
## 77                                           1.862700
## 78                                           1.974000
## 79                                           0.714000
## 80                                           1.890000
## 81                                           3.444000
## 82                                           1.386000
## 83                                           0.378000
## 84                                           3.681300
## 85                                           3.626700
## 86                                           2.324700
## 87                                           5.040000
## 88                                           4.269300
## 89                                           3.051300
## 90                                           3.723300
## 91                                           2.001300
## 92                                           2.828700
## 93                                           3.066000
## 94                                           7.377300
## 95                                           4.284000
## 96                                           5.907300
## 97                                           2.757300
## 98                                           2.757300
## 99                                           1.203300
## 100                                          3.024000
## 101                                          3.164700
## 102                                          4.605300
## 103                                          1.554000
## 104                                          4.536000
## 105                                          7.434000
## 106                                          4.731300
## 107                                          1.400700
## 108                                          2.589300
## 109                                          3.962700
## 110                                          1.764000
## 111                                          0.714000
## 112                                          1.597500
## 113                                          0.129575
## 114                                          0.438425
## 115                                          1.290425
## 116                                          0.426000
## 117                                          0.296425
## 118                                          0.484575
## 119                                          0.958500
## 120                                          0.129575
## 121                                          0.296425
## 122                                          0.792000
## 123                                          0.380600
## 124                                          0.220000
## 125                                          0.367400
## 126                                          2.831400
## 127                                          0.996600
## 128                                          0.748000
## 129                                          0.820600
## 130                                          0.411400
## 131                                          1.040600
## 132                                          2.228600
## 133                                          5.968600
## 134                                          6.864000
## 135                                          7.728600
## 136                                          5.940000
## 137                                          5.280000
## 138                                         12.348600
## 139                                          3.579400
## 140                                          4.648600
## 141                                          6.188600
## 142                                          4.676700
## 143                                          1.946700
## 144                                          5.054700
## 145                                          1.554000
## 146                                          2.576700
## 147                                          1.497300
## 148                                          1.581300
## 149                                          1.652700
## 150                                          0.447300
## 151                                          0.405300
## 152                                          1.652700
## 153                                          0.321300
## 154                                          0.588000
## 155                                          1.764000
## 156                                          2.604000
## 157                                          0.812700
## 158                                          1.862700
## 159                                          1.358700
## 160                                          0.951300
## 161                                          0.602700
## 162                                          5.845075
## 163                                          2.769000
## 164                                          7.833075
## 165                                          3.100925
## 166                                          0.710000
## 167                                          1.159075
## 168                                          1.562000
## 169                                          1.822925
## 170                                          1.384500
## 171                                          0.142000
## 172                                          2.661100
## 173                                          1.732900
## 174                                          0.555100
## 175                                          0.338000
## 176                                          0.832000
## 177                                          0.841100
## 178                                          0.130000
## 179                                          0.484900
## 180                                          0.295100
## 181                                          0.728000
## 182                                                NA
## 183                                                NA
## 184                                                NA
## 185                                                NA
## 186                                                NA
## 187                                                NA
## 188                                                NA
## 189                                                NA
## 190                                                NA
## 191                                                NA
## 192                                                NA
## 193                                                NA
## 194                                                NA
## 195                                                NA
## 196                                                NA
## 197                                                NA
## 198                                                NA
## 199                                                NA
## 200                                                NA
## 201                                                NA
## 202                                                NA
## 203                                                NA
## 204                                                NA
## 205                                                NA
## 206                                                NA
## 207                                                NA
## 208                                                NA
## 209                                                NA
## 210                                                NA
## 211                                                NA
## 212                                                NA
## 213                                                NA
## 214                                                NA
## 215                                                NA
## 216                                                NA
## 217                                                NA
## 218                                                NA
## 219                                                NA
## 220                                                NA
## 221                                                NA
## 222                                                NA
## 223                                                NA
## 224                                                NA
## 225                                                NA
## 226                                                NA
## 227                                                NA
## 228                                                NA
## 229                                                NA
## 230                                                NA
## 231                                                NA
## 232                                                NA
## 233                                                NA
## 234                                                NA
## 235                                                NA
## 236                                                NA
## 237                                                NA
## 238                                                NA
## 239                                                NA
## 240                                                NA
## 241                                                NA
## 242                                                NA
## 243                                                NA
## 244                                                NA
## 245                                                NA
## 246                                                NA
## 247                                                NA
## 248                                                NA
## 249                                                NA
## 250                                                NA
## 251                                                NA
## 252                                                NA
## 253                                                NA
## 254                                                NA
## 255                                                NA
## 256                                                NA
## 257                                                NA
## 258                                                NA
## 259                                                NA
## 260                                                NA
## 261                                                NA
## 262                                                NA
## 263                                                NA
## 264                                                NA
## 265                                                NA
## 266                                                NA
## 267                                                NA
## 268                                                NA
## 269                                                NA
## 270                                                NA
## 271                                                NA
## 272                                                NA
## 273                                                NA
## 274                                                NA
## 275                                                NA
## 276                                                NA
## 277                                                NA
## 278                                                NA
## 279                                                NA
## 280                                                NA
## 281                                                NA
## 282                                                NA
## 283                                                NA
## 284                                                NA
## 285                                                NA
## 286                                                NA
## 287                                                NA
## 288                                                NA
## 289                                                NA
## 290                                                NA
## 291                                                NA
## 292                                                NA
## 293                                                NA
## 294                                                NA
## 295                                                NA
## 296                                                NA
## 297                                                NA
## 298                                                NA
## 299                                                NA
## 300                                                NA
## 301                                                NA
## 302                                                NA
## 303                                                NA
## 304                                                NA
## 305                                                NA
## 306                                                NA
## 307                                                NA
## 308                                                NA
## 309                                                NA
## 310                                                NA
## 311                                                NA
## 312                                                NA
## 313                                                NA
## 314                                                NA
## 315                                                NA
##     particles.kg.blank.corrected.particle.corrected
## 1                                                NA
## 2                                                NA
## 3                                                NA
## 4                                                NA
## 5                                                NA
## 6                                                NA
## 7                                                NA
## 8                                                NA
## 9                                                NA
## 10                                               NA
## 11                                               NA
## 12                                               NA
## 13                                               NA
## 14                                               NA
## 15                                               NA
## 16                                               NA
## 17                                               NA
## 18                                               NA
## 19                                               NA
## 20                                               NA
## 21                                               NA
## 22                                               NA
## 23                                               NA
## 24                                               NA
## 25                                               NA
## 26                                               NA
## 27                                               NA
## 28                                               NA
## 29                                               NA
## 30                                               NA
## 31                                               NA
## 32                                               NA
## 33                                               NA
## 34                                               NA
## 35                                               NA
## 36                                               NA
## 37                                               NA
## 38                                               NA
## 39                                               NA
## 40                                               NA
## 41                                               NA
## 42                                               NA
## 43                                               NA
## 44                                               NA
## 45                                               NA
## 46                                               NA
## 47                                               NA
## 48                                               NA
## 49                                               NA
## 50                                               NA
## 51                                               NA
## 52                                               NA
## 53                                               NA
## 54                                               NA
## 55                                               NA
## 56                                               NA
## 57                                               NA
## 58                                               NA
## 59                                               NA
## 60                                               NA
## 61                                               NA
## 62                                               NA
## 63                                               NA
## 64                                               NA
## 65                                               NA
## 66                                               NA
## 67                                               NA
## 68                                               NA
## 69                                               NA
## 70                                               NA
## 71                                               NA
## 72                                               NA
## 73                                               NA
## 74                                               NA
## 75                                               NA
## 76                                               NA
## 77                                               NA
## 78                                               NA
## 79                                               NA
## 80                                               NA
## 81                                               NA
## 82                                               NA
## 83                                               NA
## 84                                               NA
## 85                                               NA
## 86                                               NA
## 87                                               NA
## 88                                               NA
## 89                                               NA
## 90                                               NA
## 91                                               NA
## 92                                               NA
## 93                                               NA
## 94                                               NA
## 95                                               NA
## 96                                               NA
## 97                                               NA
## 98                                               NA
## 99                                               NA
## 100                                              NA
## 101                                              NA
## 102                                              NA
## 103                                              NA
## 104                                              NA
## 105                                              NA
## 106                                              NA
## 107                                              NA
## 108                                              NA
## 109                                              NA
## 110                                              NA
## 111                                              NA
## 112                                              NA
## 113                                              NA
## 114                                              NA
## 115                                              NA
## 116                                              NA
## 117                                              NA
## 118                                              NA
## 119                                              NA
## 120                                              NA
## 121                                              NA
## 122                                              NA
## 123                                              NA
## 124                                              NA
## 125                                              NA
## 126                                              NA
## 127                                              NA
## 128                                              NA
## 129                                              NA
## 130                                              NA
## 131                                              NA
## 132                                              NA
## 133                                              NA
## 134                                              NA
## 135                                              NA
## 136                                              NA
## 137                                              NA
## 138                                              NA
## 139                                              NA
## 140                                              NA
## 141                                              NA
## 142                                              NA
## 143                                              NA
## 144                                              NA
## 145                                              NA
## 146                                              NA
## 147                                              NA
## 148                                              NA
## 149                                              NA
## 150                                              NA
## 151                                              NA
## 152                                              NA
## 153                                              NA
## 154                                              NA
## 155                                              NA
## 156                                              NA
## 157                                              NA
## 158                                              NA
## 159                                              NA
## 160                                              NA
## 161                                              NA
## 162                                              NA
## 163                                              NA
## 164                                              NA
## 165                                              NA
## 166                                              NA
## 167                                              NA
## 168                                              NA
## 169                                              NA
## 170                                              NA
## 171                                              NA
## 172                                              NA
## 173                                              NA
## 174                                              NA
## 175                                              NA
## 176                                              NA
## 177                                              NA
## 178                                              NA
## 179                                              NA
## 180                                              NA
## 181                                              NA
## 182                                        161.7128
## 183                                        501.8420
## 184                                        708.8136
## 185                                       5322.0992
## 186                                       1201.5036
## 187                                      21052.0850
## 188                                       1823.6300
## 189                                       3554.3500
## 190                                       1099.6478
## 191                                        325.9776
## 192                                         10.4013
## 193                                        122.1987
## 194                                       3522.9154
## 195                                       2677.2710
## 196                                        215.7564
## 197                                        390.6666
## 198                                         95.0000
## 199                                         49.7876
## 200                                         18.0126
## 201                                         38.9484
## 202                                              NA
## 203                                              NA
## 204                                              NA
## 205                                              NA
## 206                                              NA
## 207                                              NA
## 208                                              NA
## 209                                              NA
## 210                                              NA
## 211                                              NA
## 212                                              NA
## 213                                              NA
## 214                                              NA
## 215                                              NA
## 216                                              NA
## 217                                              NA
## 218                                              NA
## 219                                              NA
## 220                                              NA
## 221                                              NA
## 222                                              NA
## 223                                              NA
## 224                                              NA
## 225                                              NA
## 226                                              NA
## 227                                              NA
## 228                                              NA
## 229                                              NA
## 230                                              NA
## 231                                              NA
## 232                                              NA
## 233                                              NA
## 234                                              NA
## 235                                              NA
## 236                                              NA
## 237                                              NA
## 238                                              NA
## 239                                              NA
## 240                                              NA
## 241                                              NA
## 242                                              NA
## 243                                              NA
## 244                                              NA
## 245                                              NA
## 246                                              NA
## 247                                              NA
## 248                                              NA
## 249                                              NA
## 250                                              NA
## 251                                              NA
## 252                                              NA
## 253                                              NA
## 254                                              NA
## 255                                              NA
## 256                                              NA
## 257                                              NA
## 258                                              NA
## 259                                              NA
## 260                                              NA
## 261                                              NA
## 262                                              NA
## 263                                              NA
## 264                                              NA
## 265                                              NA
## 266                                              NA
## 267                                              NA
## 268                                              NA
## 269                                              NA
## 270                                              NA
## 271                                              NA
## 272                                              NA
## 273                                              NA
## 274                                              NA
## 275                                              NA
## 276                                              NA
## 277                                              NA
## 278                                              NA
## 279                                              NA
## 280                                              NA
## 281                                              NA
## 282                                              NA
## 283                                              NA
## 284                                              NA
## 285                                              NA
## 286                                              NA
## 287                                              NA
## 288                                              NA
## 289                                              NA
## 290                                              NA
## 291                                              NA
## 292                                              NA
## 293                                              NA
## 294                                              NA
## 295                                              NA
## 296                                              NA
## 297                                              NA
## 298                                              NA
## 299                                              NA
## 300                                              NA
## 301                                              NA
## 302                                              NA
## 303                                              NA
## 304                                              NA
## 305                                              NA
## 306                                              NA
## 307                                              NA
## 308                                              NA
## 309                                              NA
## 310                                              NA
## 311                                              NA
## 312                                              NA
## 313                                              NA
## 314                                              NA
## 315                                              NA
##     particles.L.blank.corrected.particle.corrected.upper95
## 1                                                       NA
## 2                                                       NA
## 3                                                       NA
## 4                                                       NA
## 5                                                       NA
## 6                                                       NA
## 7                                                       NA
## 8                                                       NA
## 9                                                       NA
## 10                                                      NA
## 11                                                      NA
## 12                                                      NA
## 13                                                      NA
## 14                                                      NA
## 15                                                      NA
## 16                                                      NA
## 17                                                      NA
## 18                                                      NA
## 19                                                      NA
## 20                                                      NA
## 21                                                      NA
## 22                                                      NA
## 23                                                      NA
## 24                                                      NA
## 25                                                      NA
## 26                                                      NA
## 27                                                      NA
## 28                                                      NA
## 29                                                      NA
## 30                                                      NA
## 31                                                      NA
## 32                                                      NA
## 33                                                      NA
## 34                                                      NA
## 35                                                      NA
## 36                                                      NA
## 37                                                      NA
## 38                                                      NA
## 39                                                      NA
## 40                                                      NA
## 41                                                      NA
## 42                                                      NA
## 43                                                      NA
## 44                                                      NA
## 45                                                      NA
## 46                                                      NA
## 47                                                      NA
## 48                                                      NA
## 49                                                      NA
## 50                                                      NA
## 51                                                      NA
## 52                                                      NA
## 53                                                      NA
## 54                                                      NA
## 55                                                      NA
## 56                                                      NA
## 57                                                      NA
## 58                                                      NA
## 59                                                      NA
## 60                                                      NA
## 61                                                      NA
## 62                                                      NA
## 63                                                      NA
## 64                                                      NA
## 65                                                      NA
## 66                                                      NA
## 67                                                      NA
## 68                                                      NA
## 69                                                      NA
## 70                                                      NA
## 71                                                      NA
## 72                                                      NA
## 73                                                      NA
## 74                                                      NA
## 75                                                      NA
## 76                                                      NA
## 77                                                      NA
## 78                                                      NA
## 79                                                      NA
## 80                                                      NA
## 81                                                      NA
## 82                                                      NA
## 83                                                      NA
## 84                                                      NA
## 85                                                      NA
## 86                                                      NA
## 87                                                      NA
## 88                                                      NA
## 89                                                      NA
## 90                                                      NA
## 91                                                      NA
## 92                                                      NA
## 93                                                      NA
## 94                                                      NA
## 95                                                      NA
## 96                                                      NA
## 97                                                      NA
## 98                                                      NA
## 99                                                      NA
## 100                                                     NA
## 101                                                     NA
## 102                                                     NA
## 103                                                     NA
## 104                                                     NA
## 105                                                     NA
## 106                                                     NA
## 107                                                     NA
## 108                                                     NA
## 109                                                     NA
## 110                                                     NA
## 111                                                     NA
## 112                                                     NA
## 113                                                     NA
## 114                                                     NA
## 115                                                     NA
## 116                                                     NA
## 117                                                     NA
## 118                                                     NA
## 119                                                     NA
## 120                                                     NA
## 121                                                     NA
## 122                                                     NA
## 123                                                     NA
## 124                                                     NA
## 125                                                     NA
## 126                                                     NA
## 127                                                     NA
## 128                                                     NA
## 129                                                     NA
## 130                                                     NA
## 131                                                     NA
## 132                                                     NA
## 133                                                     NA
## 134                                                     NA
## 135                                                     NA
## 136                                                     NA
## 137                                                     NA
## 138                                                     NA
## 139                                                     NA
## 140                                                     NA
## 141                                                     NA
## 142                                                     NA
## 143                                                     NA
## 144                                                     NA
## 145                                                     NA
## 146                                                     NA
## 147                                                     NA
## 148                                                     NA
## 149                                                     NA
## 150                                                     NA
## 151                                                     NA
## 152                                                     NA
## 153                                                     NA
## 154                                                     NA
## 155                                                     NA
## 156                                                     NA
## 157                                                     NA
## 158                                                     NA
## 159                                                     NA
## 160                                                     NA
## 161                                                     NA
## 162                                                     NA
## 163                                                     NA
## 164                                                     NA
## 165                                                     NA
## 166                                                     NA
## 167                                                     NA
## 168                                                     NA
## 169                                                     NA
## 170                                                     NA
## 171                                                     NA
## 172                                                     NA
## 173                                                     NA
## 174                                                     NA
## 175                                                     NA
## 176                                                     NA
## 177                                                     NA
## 178                                                     NA
## 179                                                     NA
## 180                                                     NA
## 181                                                     NA
## 182                                                     NA
## 183                                                     NA
## 184                                                     NA
## 185                                                     NA
## 186                                                     NA
## 187                                                     NA
## 188                                                     NA
## 189                                                     NA
## 190                                                     NA
## 191                                                     NA
## 192                                                     NA
## 193                                                     NA
## 194                                                     NA
## 195                                                     NA
## 196                                                     NA
## 197                                                     NA
## 198                                                     NA
## 199                                                     NA
## 200                                                     NA
## 201                                                     NA
## 202                                           1.823833e-05
## 203                                           4.848223e-03
## 204                                           3.481141e-04
## 205                                           1.497129e-03
## 206                                           4.052080e-04
## 207                                           6.581657e-05
## 208                                           3.679384e-04
## 209                                           6.137593e-04
## 210                                           5.780756e-04
## 211                                           1.796079e-03
## 212                                           3.443872e-03
## 213                                           1.490785e-04
## 214                                           4.408203e-02
## 215                                           6.978142e-05
## 216                                           1.292542e-04
## 217                                           9.991431e-05
## 218                                           1.102229e-04
## 219                                           0.000000e+00
## 220                                           1.823833e-05
## 221                                           1.728676e-04
## 222                                           1.585941e-05
## 223                                           6.264468e-05
## 224                                           1.102229e-04
## 225                                           6.185171e-05
## 226                                           3.964853e-06
## 227                                           7.612519e-05
## 228                                           4.440636e-05
## 229                                           7.786972e-04
## 230                                           2.109302e-04
## 231                                           2.830905e-04
## 232                                           1.966567e-04
## 233                                           1.213245e-04
## 234                                           4.091729e-04
## 235                                           3.140164e-04
## 236                                           2.331334e-04
## 237                                           2.164810e-04
## 238                                           1.506644e-05
## 239                                           3.013289e-05
## 240                                           5.392201e-05
## 241                                           4.282042e-05
## 242                                           3.013289e-05
## 243                                           5.392201e-05
## 244                                           1.903130e-05
## 245                                           8.881272e-05
## 246                                           1.871411e-04
## 247                                           1.435277e-04
## 248                                           2.065689e-03
## 249                                           1.015002e-04
## 250                                           3.869697e-04
## 251                                           2.298822e-03
## 252                                           1.097471e-03
## 253                                           3.378055e-04
## 254                                           3.378055e-04
## 255                                           4.678527e-05
## 256                                           4.678527e-05
## 257                                           7.295330e-05
## 258                                           7.295330e-05
## 259                                           5.051223e-04
## 260                                           5.051223e-04
## 261                                           1.117296e-03
## 262                                           1.117296e-03
## 263                                           6.423063e-05
## 264                                           6.423063e-05
## 265                                           1.038792e-04
## 266                                           1.038792e-04
## 267                                                     NA
## 268                                                     NA
## 269                                                     NA
## 270                                                     NA
## 271                                                     NA
## 272                                                     NA
## 273                                                     NA
## 274                                                     NA
## 275                                                     NA
## 276                                                     NA
## 277                                                     NA
## 278                                                     NA
## 279                                                     NA
## 280                                                     NA
## 281                                                     NA
## 282                                                     NA
## 283                                                     NA
## 284                                                     NA
## 285                                                     NA
## 286                                                     NA
## 287                                                     NA
## 288                                                     NA
## 289                                                     NA
## 290                                                     NA
## 291                                                     NA
## 292                                                     NA
## 293                                                     NA
## 294                                                     NA
## 295                                                     NA
## 296                                                     NA
## 297                                                     NA
## 298                                                     NA
## 299                                                     NA
## 300                                                     NA
## 301                                                     NA
## 302                                                     NA
## 303                                                     NA
## 304                                                     NA
## 305                                                     NA
## 306                                                     NA
## 307                                                     NA
## 308                                                     NA
## 309                                                     NA
## 310                                                     NA
## 311                                                     NA
## 312                                                     NA
## 313                                                     NA
## 314                                                     NA
## 315                                                     NA
##     particles.L.blank.corrected.particle.corrected.lower95
## 1                                                       NA
## 2                                                       NA
## 3                                                       NA
## 4                                                       NA
## 5                                                       NA
## 6                                                       NA
## 7                                                       NA
## 8                                                       NA
## 9                                                       NA
## 10                                                      NA
## 11                                                      NA
## 12                                                      NA
## 13                                                      NA
## 14                                                      NA
## 15                                                      NA
## 16                                                      NA
## 17                                                      NA
## 18                                                      NA
## 19                                                      NA
## 20                                                      NA
## 21                                                      NA
## 22                                                      NA
## 23                                                      NA
## 24                                                      NA
## 25                                                      NA
## 26                                                      NA
## 27                                                      NA
## 28                                                      NA
## 29                                                      NA
## 30                                                      NA
## 31                                                      NA
## 32                                                      NA
## 33                                                      NA
## 34                                                      NA
## 35                                                      NA
## 36                                                      NA
## 37                                                      NA
## 38                                                      NA
## 39                                                      NA
## 40                                                      NA
## 41                                                      NA
## 42                                                      NA
## 43                                                      NA
## 44                                                      NA
## 45                                                      NA
## 46                                                      NA
## 47                                                      NA
## 48                                                      NA
## 49                                                      NA
## 50                                                      NA
## 51                                                      NA
## 52                                                      NA
## 53                                                      NA
## 54                                                      NA
## 55                                                      NA
## 56                                                      NA
## 57                                                      NA
## 58                                                      NA
## 59                                                      NA
## 60                                                      NA
## 61                                                      NA
## 62                                                      NA
## 63                                                      NA
## 64                                                      NA
## 65                                                      NA
## 66                                                      NA
## 67                                                      NA
## 68                                                      NA
## 69                                                      NA
## 70                                                      NA
## 71                                                      NA
## 72                                                      NA
## 73                                                      NA
## 74                                                      NA
## 75                                                      NA
## 76                                                      NA
## 77                                                      NA
## 78                                                      NA
## 79                                                      NA
## 80                                                      NA
## 81                                                      NA
## 82                                                      NA
## 83                                                      NA
## 84                                                      NA
## 85                                                      NA
## 86                                                      NA
## 87                                                      NA
## 88                                                      NA
## 89                                                      NA
## 90                                                      NA
## 91                                                      NA
## 92                                                      NA
## 93                                                      NA
## 94                                                      NA
## 95                                                      NA
## 96                                                      NA
## 97                                                      NA
## 98                                                      NA
## 99                                                      NA
## 100                                                     NA
## 101                                                     NA
## 102                                                     NA
## 103                                                     NA
## 104                                                     NA
## 105                                                     NA
## 106                                                     NA
## 107                                                     NA
## 108                                                     NA
## 109                                                     NA
## 110                                                     NA
## 111                                                     NA
## 112                                                     NA
## 113                                                     NA
## 114                                                     NA
## 115                                                     NA
## 116                                                     NA
## 117                                                     NA
## 118                                                     NA
## 119                                                     NA
## 120                                                     NA
## 121                                                     NA
## 122                                                     NA
## 123                                                     NA
## 124                                                     NA
## 125                                                     NA
## 126                                                     NA
## 127                                                     NA
## 128                                                     NA
## 129                                                     NA
## 130                                                     NA
## 131                                                     NA
## 132                                                     NA
## 133                                                     NA
## 134                                                     NA
## 135                                                     NA
## 136                                                     NA
## 137                                                     NA
## 138                                                     NA
## 139                                                     NA
## 140                                                     NA
## 141                                                     NA
## 142                                                     NA
## 143                                                     NA
## 144                                                     NA
## 145                                                     NA
## 146                                                     NA
## 147                                                     NA
## 148                                                     NA
## 149                                                     NA
## 150                                                     NA
## 151                                                     NA
## 152                                                     NA
## 153                                                     NA
## 154                                                     NA
## 155                                                     NA
## 156                                                     NA
## 157                                                     NA
## 158                                                     NA
## 159                                                     NA
## 160                                                     NA
## 161                                                     NA
## 162                                                     NA
## 163                                                     NA
## 164                                                     NA
## 165                                                     NA
## 166                                                     NA
## 167                                                     NA
## 168                                                     NA
## 169                                                     NA
## 170                                                     NA
## 171                                                     NA
## 172                                                     NA
## 173                                                     NA
## 174                                                     NA
## 175                                                     NA
## 176                                                     NA
## 177                                                     NA
## 178                                                     NA
## 179                                                     NA
## 180                                                     NA
## 181                                                     NA
## 182                                                     NA
## 183                                                     NA
## 184                                                     NA
## 185                                                     NA
## 186                                                     NA
## 187                                                     NA
## 188                                                     NA
## 189                                                     NA
## 190                                                     NA
## 191                                                     NA
## 192                                                     NA
## 193                                                     NA
## 194                                                     NA
## 195                                                     NA
## 196                                                     NA
## 197                                                     NA
## 198                                                     NA
## 199                                                     NA
## 200                                                     NA
## 201                                                     NA
## 202                                           1.543948e-05
## 203                                           4.104217e-03
## 204                                           2.946927e-04
## 205                                           1.267380e-03
## 206                                           3.430250e-04
## 207                                           5.571639e-05
## 208                                           3.114748e-04
## 209                                           5.195721e-04
## 210                                           4.893644e-04
## 211                                           1.520453e-03
## 212                                           2.915377e-03
## 213                                           1.262010e-04
## 214                                           3.731723e-02
## 215                                           5.907280e-05
## 216                                           1.094189e-04
## 217                                           8.458151e-05
## 218                                           9.330817e-05
## 219                                           0.000000e+00
## 220                                           1.543948e-05
## 221                                           1.463394e-04
## 222                                           1.342564e-05
## 223                                           5.303126e-05
## 224                                           9.330817e-05
## 225                                           5.235998e-05
## 226                                           3.356409e-06
## 227                                           6.444305e-05
## 228                                           3.759178e-05
## 229                                           6.591987e-04
## 230                                           1.785610e-04
## 231                                           2.396476e-04
## 232                                           1.664779e-04
## 233                                           1.027061e-04
## 234                                           3.463814e-04
## 235                                           2.658276e-04
## 236                                           1.973569e-04
## 237                                           1.832599e-04
## 238                                           1.275435e-05
## 239                                           2.550871e-05
## 240                                           4.564716e-05
## 241                                           3.624922e-05
## 242                                           2.550871e-05
## 243                                           4.564716e-05
## 244                                           1.611076e-05
## 245                                           7.518356e-05
## 246                                           1.584225e-04
## 247                                           1.215020e-04
## 248                                           1.748689e-03
## 249                                           8.592407e-05
## 250                                           3.275855e-04
## 251                                           1.946046e-03
## 252                                           9.290540e-04
## 253                                           2.859661e-04
## 254                                           2.859661e-04
## 255                                           3.960563e-05
## 256                                           3.960563e-05
## 257                                           6.175793e-05
## 258                                           6.175793e-05
## 259                                           4.276065e-04
## 260                                           4.276065e-04
## 261                                           9.458361e-04
## 262                                           9.458361e-04
## 263                                           5.437383e-05
## 264                                           5.437383e-05
## 265                                           8.793792e-05
## 266                                           8.793792e-05
## 267                                                     NA
## 268                                                     NA
## 269                                                     NA
## 270                                                     NA
## 271                                                     NA
## 272                                                     NA
## 273                                                     NA
## 274                                                     NA
## 275                                                     NA
## 276                                                     NA
## 277                                                     NA
## 278                                                     NA
## 279                                                     NA
## 280                                                     NA
## 281                                                     NA
## 282                                                     NA
## 283                                                     NA
## 284                                                     NA
## 285                                                     NA
## 286                                                     NA
## 287                                                     NA
## 288                                                     NA
## 289                                                     NA
## 290                                                     NA
## 291                                                     NA
## 292                                                     NA
## 293                                                     NA
## 294                                                     NA
## 295                                                     NA
## 296                                                     NA
## 297                                                     NA
## 298                                                     NA
## 299                                                     NA
## 300                                                     NA
## 301                                                     NA
## 302                                                     NA
## 303                                                     NA
## 304                                                     NA
## 305                                                     NA
## 306                                                     NA
## 307                                                     NA
## 308                                                     NA
## 309                                                     NA
## 310                                                     NA
## 311                                                     NA
## 312                                                     NA
## 313                                                     NA
## 314                                                     NA
## 315                                                     NA
##     particles.L.blank.corrected.particle.corrected.sd
## 1                                                  NA
## 2                                                  NA
## 3                                                  NA
## 4                                                  NA
## 5                                                  NA
## 6                                                  NA
## 7                                                  NA
## 8                                                  NA
## 9                                                  NA
## 10                                                 NA
## 11                                                 NA
## 12                                                 NA
## 13                                                 NA
## 14                                                 NA
## 15                                                 NA
## 16                                                 NA
## 17                                                 NA
## 18                                                 NA
## 19                                                 NA
## 20                                                 NA
## 21                                                 NA
## 22                                                 NA
## 23                                                 NA
## 24                                                 NA
## 25                                                 NA
## 26                                                 NA
## 27                                                 NA
## 28                                                 NA
## 29                                                 NA
## 30                                                 NA
## 31                                                 NA
## 32                                                 NA
## 33                                                 NA
## 34                                                 NA
## 35                                                 NA
## 36                                                 NA
## 37                                                 NA
## 38                                                 NA
## 39                                                 NA
## 40                                                 NA
## 41                                                 NA
## 42                                                 NA
## 43                                                 NA
## 44                                                 NA
## 45                                                 NA
## 46                                                 NA
## 47                                                 NA
## 48                                                 NA
## 49                                                 NA
## 50                                                 NA
## 51                                                 NA
## 52                                                 NA
## 53                                                 NA
## 54                                                 NA
## 55                                                 NA
## 56                                                 NA
## 57                                                 NA
## 58                                                 NA
## 59                                                 NA
## 60                                                 NA
## 61                                                 NA
## 62                                                 NA
## 63                                                 NA
## 64                                                 NA
## 65                                                 NA
## 66                                                 NA
## 67                                                 NA
## 68                                                 NA
## 69                                                 NA
## 70                                                 NA
## 71                                                 NA
## 72                                                 NA
## 73                                                 NA
## 74                                                 NA
## 75                                                 NA
## 76                                                 NA
## 77                                                 NA
## 78                                                 NA
## 79                                                 NA
## 80                                                 NA
## 81                                                 NA
## 82                                                 NA
## 83                                                 NA
## 84                                                 NA
## 85                                                 NA
## 86                                                 NA
## 87                                                 NA
## 88                                                 NA
## 89                                                 NA
## 90                                                 NA
## 91                                                 NA
## 92                                                 NA
## 93                                                 NA
## 94                                                 NA
## 95                                                 NA
## 96                                                 NA
## 97                                                 NA
## 98                                                 NA
## 99                                                 NA
## 100                                                NA
## 101                                                NA
## 102                                                NA
## 103                                                NA
## 104                                                NA
## 105                                                NA
## 106                                                NA
## 107                                                NA
## 108                                                NA
## 109                                                NA
## 110                                                NA
## 111                                                NA
## 112                                                NA
## 113                                                NA
## 114                                                NA
## 115                                                NA
## 116                                                NA
## 117                                                NA
## 118                                                NA
## 119                                                NA
## 120                                                NA
## 121                                                NA
## 122                                                NA
## 123                                                NA
## 124                                                NA
## 125                                                NA
## 126                                                NA
## 127                                                NA
## 128                                                NA
## 129                                                NA
## 130                                                NA
## 131                                                NA
## 132                                                NA
## 133                                                NA
## 134                                                NA
## 135                                                NA
## 136                                                NA
## 137                                                NA
## 138                                                NA
## 139                                                NA
## 140                                                NA
## 141                                                NA
## 142                                                NA
## 143                                                NA
## 144                                                NA
## 145                                                NA
## 146                                                NA
## 147                                                NA
## 148                                                NA
## 149                                                NA
## 150                                                NA
## 151                                                NA
## 152                                                NA
## 153                                                NA
## 154                                                NA
## 155                                                NA
## 156                                                NA
## 157                                                NA
## 158                                                NA
## 159                                                NA
## 160                                                NA
## 161                                                NA
## 162                                                NA
## 163                                                NA
## 164                                                NA
## 165                                                NA
## 166                                                NA
## 167                                                NA
## 168                                                NA
## 169                                                NA
## 170                                                NA
## 171                                                NA
## 172                                                NA
## 173                                                NA
## 174                                                NA
## 175                                                NA
## 176                                                NA
## 177                                                NA
## 178                                                NA
## 179                                                NA
## 180                                                NA
## 181                                                NA
## 182                                                NA
## 183                                                NA
## 184                                                NA
## 185                                                NA
## 186                                                NA
## 187                                                NA
## 188                                                NA
## 189                                                NA
## 190                                                NA
## 191                                                NA
## 192                                                NA
## 193                                                NA
## 194                                                NA
## 195                                                NA
## 196                                                NA
## 197                                                NA
## 198                                                NA
## 199                                                NA
## 200                                                NA
## 201                                                NA
## 202                                      5.437592e-06
## 203                                      1.445454e-03
## 204                                      1.037871e-04
## 205                                      4.463554e-04
## 206                                      1.208091e-04
## 207                                      1.962261e-05
## 208                                      1.096975e-04
## 209                                      1.829868e-04
## 210                                      1.723480e-04
## 211                                      5.354846e-04
## 212                                      1.026759e-03
## 213                                      4.444640e-05
## 214                                      1.314266e-02
## 215                                      2.080470e-05
## 216                                      3.853598e-05
## 217                                      2.978855e-05
## 218                                      3.286197e-05
## 219                                      0.000000e+00
## 220                                      5.437592e-06
## 221                                      5.153892e-05
## 222                                      4.728341e-06
## 223                                      1.867695e-05
## 224                                      3.286197e-05
## 225                                      1.844053e-05
## 226                                      1.182085e-06
## 227                                      2.269604e-05
## 228                                      1.323935e-05
## 229                                      2.321615e-04
## 230                                      6.288693e-05
## 231                                      8.440088e-05
## 232                                      5.863143e-05
## 233                                      3.617181e-05
## 234                                      1.219912e-04
## 235                                      9.362115e-05
## 236                                      6.950661e-05
## 237                                      6.454185e-05
## 238                                      4.491924e-06
## 239                                      8.983848e-06
## 240                                      1.607636e-05
## 241                                      1.276652e-05
## 242                                      8.983848e-06
## 243                                      1.607636e-05
## 244                                      5.674009e-06
## 245                                      2.647871e-05
## 246                                      5.579442e-05
## 247                                      4.279148e-05
## 248                                      6.158664e-04
## 249                                      3.026138e-05
## 250                                      1.153715e-04
## 251                                      6.853730e-04
## 252                                      3.272012e-04
## 253                                      1.007137e-04
## 254                                      1.007137e-04
## 255                                      1.394861e-05
## 256                                      1.394861e-05
## 257                                      2.175037e-05
## 258                                      2.175037e-05
## 259                                      1.505977e-04
## 260                                      1.505977e-04
## 261                                      3.331116e-04
## 262                                      3.331116e-04
## 263                                      1.914978e-05
## 264                                      1.914978e-05
## 265                                      3.097063e-05
## 266                                      3.097063e-05
## 267                                                NA
## 268                                                NA
## 269                                                NA
## 270                                                NA
## 271                                                NA
## 272                                                NA
## 273                                                NA
## 274                                                NA
## 275                                                NA
## 276                                                NA
## 277                                                NA
## 278                                                NA
## 279                                                NA
## 280                                                NA
## 281                                                NA
## 282                                                NA
## 283                                                NA
## 284                                                NA
## 285                                                NA
## 286                                                NA
## 287                                                NA
## 288                                                NA
## 289                                                NA
## 290                                                NA
## 291                                                NA
## 292                                                NA
## 293                                                NA
## 294                                                NA
## 295                                                NA
## 296                                                NA
## 297                                                NA
## 298                                                NA
## 299                                                NA
## 300                                                NA
## 301                                                NA
## 302                                                NA
## 303                                                NA
## 304                                                NA
## 305                                                NA
## 306                                                NA
## 307                                                NA
## 308                                                NA
## 309                                                NA
## 310                                                NA
## 311                                                NA
## 312                                                NA
## 313                                                NA
## 314                                                NA
## 315                                                NA
##     particles.L.blank.corrected.particle.corrected.fiber.corrected
## 1                                                     3.504095e+00
## 2                                                     3.547090e+00
## 3                                                     1.547821e+01
## 4                                                     1.210310e+01
## 5                                                     1.061977e+01
## 6                                                     1.812241e+01
## 7                                                     2.162650e+01
## 8                                                     4.965926e+00
## 9                                                     2.343229e+00
## 10                                                    3.835157e+01
## 11                                                    2.657093e+01
## 12                                                    5.247544e+01
## 13                                                    8.403574e-02
## 14                                                    1.498312e-02
## 15                                                    2.316520e-01
## 16                                                    5.485124e-02
## 17                                                    3.908639e-03
## 18                                                    7.035551e-03
## 19                                                    2.423356e-02
## 20                                                    3.035710e-02
## 21                                                    2.892393e-02
## 22                                                    1.013640e-01
## 23                                                    4.820655e-03
## 24                                                    7.165839e-03
## 25                                                    1.411019e-01
## 26                                                    2.075487e-01
## 27                                                    2.366030e-01
## 28                                                    9.771598e-03
## 29                                                    8.898669e-02
## 30                                                              NA
## 31                                                              NA
## 32                                                              NA
## 33                                                              NA
## 34                                                              NA
## 35                                                              NA
## 36                                                              NA
## 37                                                              NA
## 38                                                              NA
## 39                                                              NA
## 40                                                              NA
## 41                                                              NA
## 42                                                              NA
## 43                                                              NA
## 44                                                              NA
## 45                                                              NA
## 46                                                              NA
## 47                                                              NA
## 48                                                              NA
## 49                                                              NA
## 50                                                              NA
## 51                                                              NA
## 52                                                              NA
## 53                                                              NA
## 54                                                              NA
## 55                                                              NA
## 56                                                              NA
## 57                                                              NA
## 58                                                              NA
## 59                                                              NA
## 60                                                              NA
## 61                                                              NA
## 62                                                              NA
## 63                                                              NA
## 64                                                              NA
## 65                                                              NA
## 66                                                              NA
## 67                                                              NA
## 68                                                              NA
## 69                                                              NA
## 70                                                              NA
## 71                                                              NA
## 72                                                              NA
## 73                                                              NA
## 74                                                              NA
## 75                                                              NA
## 76                                                              NA
## 77                                                              NA
## 78                                                              NA
## 79                                                              NA
## 80                                                              NA
## 81                                                              NA
## 82                                                              NA
## 83                                                              NA
## 84                                                              NA
## 85                                                              NA
## 86                                                              NA
## 87                                                              NA
## 88                                                              NA
## 89                                                              NA
## 90                                                              NA
## 91                                                              NA
## 92                                                              NA
## 93                                                              NA
## 94                                                              NA
## 95                                                              NA
## 96                                                              NA
## 97                                                              NA
## 98                                                              NA
## 99                                                              NA
## 100                                                             NA
## 101                                                             NA
## 102                                                             NA
## 103                                                             NA
## 104                                                             NA
## 105                                                             NA
## 106                                                             NA
## 107                                                             NA
## 108                                                             NA
## 109                                                             NA
## 110                                                             NA
## 111                                                             NA
## 112                                                             NA
## 113                                                             NA
## 114                                                             NA
## 115                                                             NA
## 116                                                             NA
## 117                                                             NA
## 118                                                             NA
## 119                                                             NA
## 120                                                             NA
## 121                                                             NA
## 122                                                             NA
## 123                                                             NA
## 124                                                             NA
## 125                                                             NA
## 126                                                             NA
## 127                                                             NA
## 128                                                             NA
## 129                                                             NA
## 130                                                             NA
## 131                                                             NA
## 132                                                             NA
## 133                                                             NA
## 134                                                             NA
## 135                                                             NA
## 136                                                             NA
## 137                                                             NA
## 138                                                             NA
## 139                                                             NA
## 140                                                             NA
## 141                                                             NA
## 142                                                             NA
## 143                                                             NA
## 144                                                             NA
## 145                                                             NA
## 146                                                             NA
## 147                                                             NA
## 148                                                             NA
## 149                                                             NA
## 150                                                             NA
## 151                                                             NA
## 152                                                             NA
## 153                                                             NA
## 154                                                             NA
## 155                                                             NA
## 156                                                             NA
## 157                                                             NA
## 158                                                             NA
## 159                                                             NA
## 160                                                             NA
## 161                                                             NA
## 162                                                             NA
## 163                                                             NA
## 164                                                             NA
## 165                                                             NA
## 166                                                             NA
## 167                                                             NA
## 168                                                             NA
## 169                                                             NA
## 170                                                             NA
## 171                                                             NA
## 172                                                             NA
## 173                                                             NA
## 174                                                             NA
## 175                                                             NA
## 176                                                             NA
## 177                                                             NA
## 178                                                             NA
## 179                                                             NA
## 180                                                             NA
## 181                                                             NA
## 182                                                             NA
## 183                                                             NA
## 184                                                             NA
## 185                                                             NA
## 186                                                             NA
## 187                                                             NA
## 188                                                             NA
## 189                                                             NA
## 190                                                             NA
## 191                                                             NA
## 192                                                             NA
## 193                                                             NA
## 194                                                             NA
## 195                                                             NA
## 196                                                             NA
## 197                                                             NA
## 198                                                             NA
## 199                                                             NA
## 200                                                             NA
## 201                                                             NA
## 202                                                   7.743200e-05
## 203                                                   2.058345e-02
## 204                                                   1.477941e-03
## 205                                                   6.356157e-03
## 206                                                   1.720337e-03
## 207                                                   2.794285e-04
## 208                                                   1.562106e-03
## 209                                                   2.605755e-03
## 210                                                   2.454258e-03
## 211                                                   7.625369e-03
## 212                                                   1.462118e-02
## 213                                                   6.329224e-04
## 214                                                   1.871531e-01
## 215                                                   2.962616e-04
## 216                                                   5.487572e-04
## 217                                                   4.241927e-04
## 218                                                   4.679586e-04
## 219                                                   0.000000e+00
## 220                                                   7.743200e-05
## 221                                                   7.339207e-04
## 222                                                   6.733217e-05
## 223                                                   2.659621e-04
## 224                                                   4.679586e-04
## 225                                                   2.625955e-04
## 226                                                   1.683304e-05
## 227                                                   3.231944e-04
## 228                                                   1.885301e-04
## 229                                                   3.306010e-03
## 230                                                   8.955179e-04
## 231                                                   1.201879e-03
## 232                                                   8.349190e-04
## 233                                                   5.150911e-04
## 234                                                   1.737170e-03
## 235                                                   1.333177e-03
## 236                                                   9.897830e-04
## 237                                                   9.190842e-04
## 238                                                   6.396557e-05
## 239                                                   1.279311e-04
## 240                                                   2.289294e-04
## 241                                                   1.817969e-04
## 242                                                   1.279311e-04
## 243                                                   2.289294e-04
## 244                                                   8.079861e-05
## 245                                                   3.770602e-04
## 246                                                   7.945197e-04
## 247                                                   6.093562e-04
## 248                                                   8.770016e-03
## 249                                                   4.309259e-04
## 250                                                   1.642905e-03
## 251                                                   9.759799e-03
## 252                                                   4.659386e-03
## 253                                                   1.434175e-03
## 254                                                   1.434175e-03
## 255                                                   1.986299e-04
## 256                                                   1.986299e-04
## 257                                                   3.097280e-04
## 258                                                   3.097280e-04
## 259                                                   2.144530e-03
## 260                                                   2.144530e-03
## 261                                                   4.743552e-03
## 262                                                   4.743552e-03
## 263                                                   2.726953e-04
## 264                                                   2.726953e-04
## 265                                                   4.410257e-04
## 266                                                   4.410257e-04
## 267                                                   9.879729e+00
## 268                                                   7.797157e+00
## 269                                                   2.119183e+01
## 270                                                   1.789710e+00
## 271                                                   5.562200e+00
## 272                                                   1.421063e+01
## 273                                                   6.628898e+00
## 274                                                   4.512516e+00
## 275                                                   7.707876e+00
## 276                                                   7.272978e+00
## 277                                                   1.875663e+01
## 278                                                   5.334525e+01
## 279                                                   4.690367e+00
## 280                                                   2.564724e+00
## 281                                                   1.355754e+01
## 282                                                   1.019867e+00
## 283                                                   0.000000e+00
## 284                                                   2.832347e+00
## 285                                                   1.109388e+00
## 286                                                   1.974060e+00
## 287                                                   5.729681e+00
## 288                                                   1.025866e+01
## 289                                                   4.236529e+00
## 290                                                   2.522550e+01
## 291                                                   7.986693e+00
## 292                                                   2.122115e+01
## 293                                                   3.726062e+00
## 294                                                   1.474958e+00
## 295                                                   5.582029e+01
## 296                                                   3.521838e+00
## 297                                                   3.443149e+00
## 298                                                   2.510366e+00
## 299                                                   6.675095e+00
## 300                                                   5.475330e+00
## 301                                                   2.933966e+01
## 302                                                   9.847347e+00
## 303                                                   2.065149e+00
## 304                                                   1.271447e+01
## 305                                                   6.923976e+00
## 306                                                   3.302042e+00
## 307                                                   5.518079e+00
## 308                                                   8.977352e+00
## 309                                                   2.055081e+01
## 310                                                   7.510719e+00
## 311                                                   6.384111e+00
## 312                                                   1.146002e+01
## 313                                                   1.181381e+01
## 314                                                   6.229269e+00
## 315                                                   9.976286e+00

#Probabilistic Analysis ## Fiber Correction Distribution ### FitDistrPlus method

library(fitdistrplus)

#extract only proportions data
shape_fiber <- shape_counts %>% 
 # filter(proportion > 0.5) %>% 
  filter(category == "fiber") %>% 
  mutate(fiber.adjustment = 1 / (1 - proportion))

fiber.proportions <- shape_fiber$proportion
fiber.adjustment <- log10(shape_fiber$fiber.adjustment) #log10 transformation to improve modelling
summary(fiber.adjustment)
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
## 0.06022 0.64880 1.07463 0.96513 1.22650 1.94612
#determine possible candidates with descdist
descdist(fiber.proportions, discrete = FALSE)

## summary statistics
## ------
## min:  0.1294766   max:  0.9886792 
## median:  0.9157895 
## mean:  0.782533 
## estimated sd:  0.2826277 
## estimated skewness:  -1.93166 
## estimated kurtosis:  6.422156
cullen.frey.fiber <- descdist(fiber.adjustment, boot =1000)

cullen.frey.fiber
## summary statistics
## ------
## min:  0.06021954   max:  1.946125 
## median:  1.074634 
## mean:  0.9651293 
## estimated sd:  0.5613935 
## estimated skewness:  -0.03045785 
## estimated kurtosis:  3.260815
fiber.proportions.fit.beta <- fitdist(fiber.proportions, "beta")
plot(fiber.proportions.fit.beta)

summary(fiber.proportions.fit.beta)
## Fitting of the distribution ' beta ' by maximum likelihood 
## Parameters : 
##         estimate Std. Error
## shape1 1.7390479  0.8720739
## shape2 0.5810629  0.2320818
## Loglikelihood:  4.334125   AIC:  -4.668251   BIC:  -4.273802 
## Correlation matrix:
##           shape1    shape2
## shape1 1.0000000 0.6118059
## shape2 0.6118059 1.0000000
summary(fiber.proportions)
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
##  0.1295  0.7755  0.9158  0.7825  0.9406  0.9887
fiber.adjustment.fit.norm <- fitdist(fiber.adjustment, "norm",
                                 #    fix.arg = list(a = 0.06),
                                  #   start = as.list(mean = mean(fiber.adjustment), sd = sd(fiber.adjustment)))
                                 )
plot(fiber.adjustment.fit.norm)

summary(fiber.adjustment.fit.norm)
## Fitting of the distribution ' norm ' by maximum likelihood 
## Parameters : 
##       estimate Std. Error
## mean 0.9651293  0.1764290
## sd   0.5292869  0.1247521
## Loglikelihood:  -7.044424   AIC:  18.08885   BIC:  18.4833 
## Correlation matrix:
##              mean           sd
## mean 1.000000e+00 4.887176e-12
## sd   4.887176e-12 1.000000e+00

2.5.4 Gamlss package

The gamlss package for R offers the ability to try many different distributions and select the “best” according to the GAIC (the generalized Akaike information criterion). The main function is fitDist. An important option in this function is the type of the distributions that are tried. For example, setting type = “realline” will try all implemented distributions defined on the whole real line whereas type = “realsplus” will only try distributions defined on the real positive line. Another important option is the parameter k, which is the penalty for the GAIC. In the example below, I set the parameter k=2 which means that the “best” distribution is selected according to the classic AIC. You can set k to anything you like, such as log(n) for the BIC.

fit <- fitDist(fiber.adjustment, k = 2, type = "realplus", trace = TRUE)
## ----------------------------------------  
## fitting different realplus distributions 
## 
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  |===                                                                   |   4%1   EXP 19.36112 
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  |======                                                                |   9%2   GA 19.84279 
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  |============                                                          |  17%4   LOGNO 23.28481 
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  |===============                                                       |  22%5   LOGNO2 23.28481 
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  |==================                                                    |  26%6   WEI 18.7167 
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  |=====================                                                 |  30%7   WEI2 18.7167 
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  |========================                                              |  35%8   WEI3 18.7167 
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  |===========================                                           |  39%9   IGAMMA 28.66445 
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  |==============================                                        |  43%10   PARETO2 21.36115 
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  |===========================================                           |  61%14   BCCGo 19.16741 
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  |==============================================                        |  65%15   exGAUS 20.08888 
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  |=================================================                     |  70%16   GG 18.97794 
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  |====================================================                  |  74%17   GIG 21.84279 
## 
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  |=======================================================               |  78%18   LNO FAILED 
## 
  |                                                                            
  |==========================================================            |  83%19   BCTo 21.16742 
## 
  |                                                                            
  |=============================================================         |  87%Error in solve.default(oout$hessian) : 
##   Lapack routine dgesv: system is exactly singular: U[4,4] = 0
## 20   BCT 21.16741 
## 
  |                                                                            
  |================================================================      |  91%21   BCPEo 20.95534 
## 
  |                                                                            
  |===================================================================   |  96%22   BCPE 20.95534 
## 
  |                                                                            
  |======================================================================| 100%23   GB2 20.97796
summary(fit)
## *******************************************************************
## Family:  c("WEI2", "Weibull type 2") 
## 
## Call:  gamlssML(formula = y, family = DIST[i]) 
## 
## Fitting method: "nlminb" 
## 
## 
## Coefficient(s):
##            Estimate  Std. Error  t value Pr(>|t|)  
## eta.mu    -0.103498    0.355090 -0.29147 0.770692  
## eta.sigma  0.517164    0.286425  1.80558 0.070984 .
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
## 
##  Degrees of Freedom for the fit: 2 Residual Deg. of Freedom   7 
## Global Deviance:     14.7167 
##             AIC:     18.7167 
##             SBC:     19.1112
n = 10000
## Generate values for the three distributions

fiber.func <- function(F){
  success <- FALSE
  while(!success){
    #F = rlnorm(n = 1, mean = fiber.adjustment.fit.norm$estimate[1], sd = fiber.adjustment.fit.norm$estimate[2])
    F = rnorm(n = 1, mean = fiber.adjustment.fit.norm$estimate[1], sd = fiber.adjustment.fit.norm$estimate[2])
    #F = rWEI2(n = 1, mu = fit$mu.coefficients[1], sigma = fit$sigma.coefficients[1])
    #F = rbeta(n = 1, shape1 = fiber.proportions.fit.beta$estimate[1], fiber.proportions.fit.beta$estimate[2])
   # F = rSEP2(n = 1, mu = fit$mu.coefficients[1], sigma = fit$sigma.coefficients[1], nu = fit$nu.coefficients[1], 
    #        tau =  fit$tau.coefficients[1]) #PDF
    success <- F <max(fiber.adjustment)} #lower limit of 0
    return(F)
  }
  
fiber <- data.frame(fiber.coefficent = numeric(0));

for(i in 1:n){
  X <- fiber.func()
  fiber <- rbind(fiber, X)
}

colnames(fiber) <- c("logfiber.adjustment")

#re-transform
fiber$fiber.adjustment <- 10 ^ fiber$logfiber.adjustment
#fiber$fiber.adjustment <- 1/(1 - fiber$fiber.proportion) #calculate adjustement based on percentage of fibers
  
summary(fiber$fiber.adjustment)
##     Min.  1st Qu.   Median     Mean  3rd Qu.     Max. 
##  0.09822  3.89330  8.91095 14.89182 19.31521 88.23998
#define for plotting
fiber5 <- as.vector(quantile(fiber$fiber.adjustment, 0.05)[1])
fiber50 <- as.vector(quantile(fiber$fiber.adjustment, 0.50)[1])
fiber95 <- as.vector(quantile(fiber$fiber.adjustment, 0.95)[1])

#plot
fiber_hist <- fiber %>% 
  ggplot(aes(x = fiber.adjustment)) +
  geom_density(fill = "orange",
               color = "orange") +
  #geom_histogram(fill = "lightblue") +
  #@scale_x_log10() +
  scale_x_continuous(limits = c(0, 100),
                     breaks = c(round(fiber5,0), round(fiber50,0), round(fiber95,0), 100)) +
  geom_vline(aes(xintercept = median(fiber.adjustment)),
             linetype = "solid") +
  geom_vline(aes(xintercept = quantile(fiber.adjustment, 0.95)),
             linetype = "dashed") +
  geom_vline(aes(xintercept = quantile(fiber.adjustment, 0.05)),
             linetype = "dashed") +
  xlab("Manta Trawl Fiber Correction Factor") +
  ylab("Relative Density") +
  theme.type +
  theme(legend.position = "none",
        axis.title.y = element_text(size = 16),
        axis.title.x = element_text(size = 16),
        axis.text.y = element_blank())
  
fiber_hist

2.6 Plastic Percentage

2.6.0.1 Fit Distributions

plastic.proportions.manta <- manta.sample.plastic.percentages$freq / 1000

#determine possible candidates with descdist
cullen.frey.plastic <- descdist(plastic.proportions.manta, discrete = FALSE, boot =1000)

cullen.frey.plastic
## summary statistics
## ------
## min:  0.009090909   max:  0.1 
## median:  0.08021978 
## mean:  0.07321263 
## estimated sd:  0.0236417 
## estimated skewness:  -0.9471333 
## estimated kurtosis:  3.293616
plastic.proprotions.fit.beta <- fitdist(plastic.proportions.manta, "beta")
plot(plastic.proprotions.fit.beta)

summary(plastic.proprotions.fit.beta)
## Fitting of the distribution ' beta ' by maximum likelihood 
## Parameters : 
##         estimate Std. Error
## shape1  5.806742   1.048856
## shape2 73.695004  13.855538
## Loglikelihood:  125.8089   AIC:  -247.6178   BIC:  -243.4969 
## Correlation matrix:
##           shape1    shape2
## shape1 1.0000000 0.9542329
## shape2 0.9542329 1.0000000
fitPlastic <- fitDist(plastic.proportions.manta, k = 2, type = "realplus", trace = TRUE, try.gamlss = TRUE)
## ----------------------------------------  
## fitting different realplus distributions 
## 
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  |========================================                              |  57%13   BCCG -275.3747 
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  |==============================================                        |  65%15   exGAUS -264.7976 
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  |==========================================================            |  83%Error in solve.default(oout$hessian) : 
##   Lapack routine dgesv: system is exactly singular: U[4,4] = 0
## 19   BCTo -273.3747 
## 
  |                                                                            
  |=============================================================         |  87%Error in solve.default(oout$hessian) : 
##   Lapack routine dgesv: system is exactly singular: U[4,4] = 0
## 20   BCT -273.3747 
## 
  |                                                                            
  |================================================================      |  91%21   BCPEo -363.248 
## 
  |                                                                            
  |===================================================================   |  96%Error in solve.default(oout$hessian) : 
##   system is computationally singular: reciprocal condition number = 2.79537e-19
## 22   BCPE -298.6373 
## 
  |                                                                            
  |======================================================================| 100%23   GB2 -281.7441
summary(fitPlastic)
## ******************************************************************
## Family:  c("BCPEo", "Box-Cox Power Exponential-orig.") 
## 
## Call:  gamlss(formula = y ~ 1, family = DIST[i], trace = FALSE) 
## 
## Fitting method: RS() 
## 
## ------------------------------------------------------------------
## Mu link function:  log
## Mu Coefficients:
##              Estimate Std. Error t value Pr(>|t|)    
## (Intercept) -2.64e+00   7.12e-05  -37077   <2e-16 ***
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
## 
## ------------------------------------------------------------------
## Sigma link function:  log
## Sigma Coefficients:
##               Estimate Std. Error t value Pr(>|t|)    
## (Intercept) -1.1957163  0.0002209   -5413   <2e-16 ***
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
## 
## ------------------------------------------------------------------
## Nu link function:  identity 
## Nu Coefficients:
##              Estimate Std. Error t value Pr(>|t|)    
## (Intercept) 2.4460646  0.0008432    2901   <2e-16 ***
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
## 
## ------------------------------------------------------------------
## Tau link function:  log 
## Tau Coefficients:
##             Estimate Std. Error t value Pr(>|t|)
## (Intercept)    12.78      11.75   1.087    0.282
## 
## ------------------------------------------------------------------
## No. of observations in the fit:  58 
## Degrees of Freedom for the fit:  4
##       Residual Deg. of Freedom:  54 
##                       at cycle:  8 
##  
## Global Deviance:     -371.248 
##             AIC:     -363.248 
##             SBC:     -355.0062 
## ******************************************************************
plastic.func <- function(F){
  success <- FALSE
  while(!success){
    P = rbeta(n = 1,
              shape1 = plastic.proprotions.fit.beta$estimate[1],
              shape2 = plastic.proprotions.fit.beta$estimate[2])
    success <- P < 0.1} #upper limit of 1 (values were divied by ten for compuation above)
    return(P)
  }
  
plastic <- data.frame(plastic.coefficent = numeric(0));

for(i in 1:n){
  X <- plastic.func()
  plastic <- rbind(plastic, X)
}

colnames(plastic) <- c("plastic.proportion")
  
plastic$plastic.proportion <- plastic$plastic.proportion * 10 # correct from transoformation above

distributions <- cbind(plastic$plastic.proportion, fiber$fiber.adjustment)

colnames(distributions) <- c("plastic.proportion", "fiber.proportion")

summary(plastic$plastic.proportion)
##    Min. 1st Qu.  Median    Mean 3rd Qu.    Max. 
## 0.07881 0.48155 0.63278 0.63100 0.78573 0.99963
#define for plotting
plastic5 <- as.vector(quantile(plastic$plastic.proportion, 0.05)[1])
plastic50 <- as.vector(quantile(plastic$plastic.proportion, 0.50)[1])
plastic95 <- as.vector(quantile(plastic$plastic.proportion, 0.95)[1])

#plot
plastic_hist <- plastic %>% 
  ggplot(aes(x = plastic.proportion)) +
  geom_density(fill = "forestgreen",
               color = "forestgreen") +
  #geom_histogram(fill = "lightblue") +
  #@scale_x_log10() +
  scale_x_continuous(limits = c(0, 1),
                     breaks = c(0, round(plastic5,2), round(plastic50,2), round(plastic95,2))) +
  geom_vline(aes(xintercept = median(plastic.proportion)),
             linetype = "solid") +
  geom_vline(aes(xintercept = quantile(plastic.proportion, 0.95)),
             linetype = "dashed") +
  geom_vline(aes(xintercept = quantile(plastic.proportion, 0.05)),
             linetype = "dashed") +
  xlab("Proportion of Particles Confirmed Plastic") +
  ylab("Relative Density") +
  theme.type +
  theme(legend.position = "none",
        axis.title.y = element_text(size = 16),
        axis.title.x = element_text(size = 16),
        axis.text.y = element_blank())
  
plastic_hist

## Alignment Correction Factor Since the alpha value was derived using a log-log linear regression, we can assume the distribution is log-normally distributed.

2.6.1 Alphas

#alpha dataframe
alpha <- data.frame(n = c(1:n),
                    alpha = numeric(n))

# parameters derived for SF Bay
m.alpha =  alpha.marine
sd.alpha = alpha.marine.sd
min.alpha = 1.01 #from Kooi et al 2021
max.alpha = 2.56 #from Kooi et al 2021

#create truncated distribution of alpha values based on variation in SF Bay dataset
alpha$alpha <- rnorm(n = n, mean = m.alpha, sd = sd.alpha)  #rtnorm(n = n, mean = m.alpha, sd = sd.alpha, lower = min.alpha, upper = max.alpha)

#define for plotting
alpha5 <- as.vector(quantile(alpha$alpha, 0.05)[1])
alpha50 <- as.vector(quantile(alpha$alpha, 0.50)[1])
alpha95 <- as.vector(quantile(alpha$alpha, 0.95)[1])

#plot
alpha_hist <- alpha %>% 
  ggplot(aes(x = alpha)) +
  geom_density(fill = "purple",
               color = "purple") +
  #geom_histogram(fill = "lightblue") +
  #@scale_x_log10() +
  scale_x_continuous(limits = c(1.5, 2.5),
                     breaks = c(1, round(alpha5,2), round(alpha50,2), round(alpha95,2), 3)) +
  geom_vline(aes(xintercept = median(alpha)),
             linetype = "solid") +
  geom_vline(aes(xintercept = quantile(alpha, 0.95)),
             linetype = "dashed") +
  geom_vline(aes(xintercept = quantile(alpha, 0.05)),
             linetype = "dashed") +
  ylab("Relative Density") +
  theme.type +
  theme(legend.position = "none",
        axis.title.y = element_text(size = 16),
        axis.title.x = element_text(size = 16),
        axis.text.y = element_blank())
  
alpha_hist

### Correction Factors

# derive correction factors based on alpha values
alpha2 <- alpha %>% 
  mutate(CF = CFfnx(a = alpha,
                    x2D = x2D_set,
                    x1D = x1D_set,
                    x2M = 5000,
                    x1M = 333)) 

#define for plotting
CF5 <- as.vector(quantile(alpha2$CF, 0.05)[1])
CF50 <- as.vector(quantile(alpha2$CF, 0.50)[1])
CF95 <- as.vector(quantile(alpha2$CF, 0.95)[1])

#plot
CF_hist <- alpha2 %>% 
  ggplot(aes(x = CF)) +
  geom_density(fill = "lightblue",
               color = "lightblue") +
  #geom_histogram(fill = "lightblue") +
  #@scale_x_log10() +
  scale_x_continuous(limits = c(0, 2000),
                     breaks = c(round(CF5,0), round(CF50,0), round(CF95,0), 1000, 2000)) +
  geom_vline(aes(xintercept = median(CF)),
             linetype = "solid") +
  geom_vline(aes(xintercept = quantile(CF, 0.95)),
             linetype = "dashed") +
  geom_vline(aes(xintercept = quantile(CF, 0.05)),
             linetype = "dashed") +
  ylab("Relative Density") +
  xlab("Alignment Correction Factor") +
  theme.type +
  theme(legend.position = "none",
      axis.title.y = element_text(size = 16),
        axis.title.x = element_text(size = 16),
        axis.text.y = element_blank())
  
CF_hist

2.7 Combine distributions

#bind to distributino data frame
distributions_final <- cbind(distributions, alpha2)

combined.distributions <- distributions_final %>% 
  as.data.frame() %>% 
  mutate(combined.corrections = plastic.proportion * fiber.proportion * CF) %>% 
  mutate(combined.corrections.noFiberCorrection = plastic.proportion * CF)

summary(combined.distributions$combined.corrections)
##      Min.   1st Qu.    Median      Mean   3rd Qu.      Max. 
##      9.11    668.10   1856.16   4955.45   4946.72 251154.55
quantile(combined.distributions$combined.corrections, c(0.05, .25, .50,  .75, .90, 0.95, .99) )
##         5%        25%        50%        75%        90%        95%        99% 
##   157.8107   668.1017  1856.1637  4946.7227 11790.3991 19306.7056 48005.8937
#quantile(combined.distributions$fiber.proportion, c(0.05,.25, .50,  .75, .90, 0.95, .99) )
#define for plotting and corrections later
combined.corrections5 <- as.vector(quantile(combined.distributions$combined.corrections, 0.05)[1])
combined.corrections25 <- as.vector(quantile(combined.distributions$combined.corrections, 0.25)[1])
combined.corrections50 <- as.vector(quantile(combined.distributions$combined.corrections, 0.50)[1])
combined.corrections75 <- as.vector(quantile(combined.distributions$combined.corrections, 0.75)[1])
combined.corrections95 <- as.vector(quantile(combined.distributions$combined.corrections, 0.95)[1])

#define for plotting and corrections later
combined.corrections.noFiberCorrection5 <- as.vector(quantile(combined.distributions$combined.corrections.noFiberCorrection, 0.05)[1])
combined.corrections.noFiberCorrection25 <- as.vector(quantile(combined.distributions$combined.corrections.noFiberCorrection, 0.25)[1])
combined.corrections.noFiberCorrection50 <- as.vector(quantile(combined.distributions$combined.corrections.noFiberCorrection, 0.50)[1])
combined.corrections.noFiberCorrection75 <- as.vector(quantile(combined.distributions$combined.corrections.noFiberCorrection, 0.75)[1])
combined.corrections.noFiberCorrection95 <- as.vector(quantile(combined.distributions$combined.corrections.noFiberCorrection, 0.95)[1])


#plot
combined.corrections_hist <- combined.distributions %>% 
  ggplot(aes(x = combined.corrections)) +
  geom_density(fill = "deeppink",
               color = "deeppink") +
  #geom_histogram(fill = "lightblue") +
  #@scale_x_log10() +
  scale_x_continuous(limits = c(0, 20000),
                     breaks = c(round(combined.corrections5,0), round(combined.corrections50,0), round(combined.corrections95,0))) +
  geom_vline(aes(xintercept = median(combined.corrections)),
             linetype = "solid") +
  geom_vline(aes(xintercept = quantile(combined.corrections, 0.95)),
             linetype = "dashed") +
  geom_vline(aes(xintercept = quantile(combined.corrections, 0.05)),
             linetype = "dashed") +
  ylab("Relative Density") +
  xlab("Combined Correction Factors") +
  theme.type +
  theme(legend.position = "none",
        axis.title.y = element_text(size = 16),
        axis.title.x = element_text(size = 16),
        axis.text.y = element_blank())

combined.corrections_hist

## Plot
# combined.distributions %>% 
#   pivot_longer(cols = c(plastic.proportion,fiber.proportion, alpha, CF, combined.corrections)) %>% 
#   ggplot(aes(x = value,
#          fill = name)) +
#   geom_histogram() +
#   #scale_x_log10() +
#   theme.type +
#   theme(legend.position = "none") +
#   facet_wrap(. ~ name,
#              scales = "free",
#              nrow = 3)


PDFs <- ggarrange(fiber_hist, plastic_hist, alpha_hist, CF_hist, combined.corrections_hist,
             ncol = 2,
             nrow = 3,
             labels = c("A", "B", "C", "D", "E"))

PDFs

ggsave(plot = PDFs,
       filename = "PDFs.jpeg",
       path = "output/figures/", 
       width = 11, height = 9, units = "in",
       bg = "white",
       dpi = 300)
cullenFreys <- ggarrange(cullen.frey.fiber, cullen.frey.plastic,
             ncol = 2,
             nrow = 3,
             labels = c("A", "B", "C", "D", "E"))

cullenFreys

ggsave(plot =cullenFreys,
       filename = "cullenFreys.jpeg",
       path = "output/figures/", 
       width = 11, height = 8, units = "in",
       bg = "white",
       dpi = 300)

3 APPLY CORRECTION FACTORS

Given an upper limit (UL) and lower limit (LL) of the measured and default size range, a dimensionless correction factor (\(CF_{meas}\)) for measured environmental concentrations may be calculated, which rescales the measured number concentrations for a certain size range to the number concentration for the microplastics default (D) size range (e.g. 1 to 5,000 um) (Koelmans et al 2020). Coefficients for the environmental-specific compartment for the power law distribution for length (L) with slope \(\alpha_L\) is from Table S4 of Kooi et al (2021).

\(CF_{Meas} = \frac{L^{1-a}_{UL,D} - L^{1-a}_{LL,D}}{L^{1-a}_{UL,M} - L^{1-a}_{LL,M}}\)

# correct aquatic concentrations for SF Bay
sfBay_aligned <- sfBay3 %>% 
  #remove duplicate rows
  distinct(sampleID, .keep_all = TRUE) %>% 
  #filter
  filter(!grepl("blank", sampleID)) %>% #remove blanks
  mutate(CF = case_when(
    sample.matrix.specific == "surface water" ~ CFfnx(a = alpha.marine, x1M = x1M, x2M = x2M, x1D = x1D_set, x2D = x2D_set),
   sample.matrix.specific == "sediment" ~ CFfnx(a = alpha.sediment, x1M = x1M, x2M = x2M, x1D = x1D_set, x2D = x2D_set),
   sample.matrix.specific == "wastewater" ~ CFfnx(a = alpha.wastewater, x1M = x1M, x2M = x2M, x1D = x1D_set, x2D = x2D_set),
   sample.matrix.specific == "stormwater" ~ CFfnx(a = alpha.stormwater, x1M = x1M, x2M = x2M, x1D = x1D_set, x2D = x2D_set),
   sample.matrix == "fish" ~ CFfnx(a = alpha.fish, x1M = x1M, x2M = x2M, x1D = x1D_set, x2D = x2D_set))#,

) %>% 
  
  #probabilistic corrections
  mutate(particle.L.master.05 = case_when(Sampling.apparatus == "Manta Trawl" ~
                                                 particles.L.blank.corrected * combined.corrections5)) %>% 
  mutate(particle.L.master.25 = case_when(Sampling.apparatus == "Manta Trawl" ~
                                                 particles.L.blank.corrected * combined.corrections25)) %>% 
  mutate(particle.L.master.50 = case_when(Sampling.apparatus == "Manta Trawl" ~
                                                 particles.L.blank.corrected * combined.corrections50,
                                       Sampling.apparatus == "1-L grab" ~ particles.L.blank.corrected * CF)) %>% 
    mutate(particle.L.master.75 = case_when(Sampling.apparatus == "Manta Trawl" ~
                                                 particles.L.blank.corrected * combined.corrections75)) %>% 
  mutate(particle.L.master.95 = case_when(Sampling.apparatus == "Manta Trawl" ~
                                                 particles.L.blank.corrected * combined.corrections95)) %>% 
  #probabilistic corrections (no fiber correction)
  mutate(particle.L.master.05.noFiberCorrection = case_when(Sampling.apparatus == "Manta Trawl" ~
                                                 particles.L.blank.corrected * combined.corrections.noFiberCorrection5)) %>% 
  mutate(particle.L.master.25.noFiberCorrection = case_when(Sampling.apparatus == "Manta Trawl" ~
                                                 particles.L.blank.corrected * combined.corrections.noFiberCorrection25)) %>% 
  mutate(particle.L.master.50.noFiberCorrection = case_when(Sampling.apparatus == "Manta Trawl" ~
                                                 particles.L.blank.corrected * combined.corrections.noFiberCorrection50,
                                       Sampling.apparatus == "1-L grab" ~ particles.L.blank.corrected * CF)) %>% 
    mutate(particle.L.master.75.noFiberCorrection = case_when(Sampling.apparatus == "Manta Trawl" ~
                                                 particles.L.blank.corrected * combined.corrections.noFiberCorrection75)) %>% 
  mutate(particle.L.master.95.noFiberCorrection = case_when(Sampling.apparatus == "Manta Trawl" ~
                                                 particles.L.blank.corrected * combined.corrections.noFiberCorrection95)) %>% 
  #baseline corrections
  mutate(particle.L.master = case_when(Sampling.apparatus == "Manta Trawl" ~ particle.L.master.50,
                                       Sampling.apparatus == "1-L grab" ~  particles.L.blank.corrected * CF,
                                       sample.matrix.specific == "stormwater" ~  particles.L.blank.corrected.particle.corrected * CF,
                                       sample.matrix.specific == "wastewater" ~  particles.L.blank.corrected.particle.corrected * CF),
         particle.fish.master = particles.fish.blank.corrected.particle.corrected * CF,
         particles.kg.master = particles.kg.blank.corrected.particle.corrected * CF) %>% 
  rename(unaligned.particle.L.master = particles.L.blank.corrected.particle.corrected) %>% 

  #filter(unaligned.particle.L.master > 0) %>%  #remove blanks. should convert to 1/2 LOQ...
  mutate(source = "SFEI") %>% 
  mutate(Reference = "Zhu et. al 2021") %>% 
  rename(Sampling.location = general.location) %>% 
  #dplyr::select(-c(particles.kg.blank.corrected,
   #                particles.fish.blank.corrected)) %>% 
  mutate(compartment = case_when(
    System == "Lake" ~ "freshwater",
    System == "River" ~ "freshwater",
    System == "Estuary" ~ "marine",
    System == "Ocean" ~ "marine",
  )) %>% 
  mutate(Conc = particle.L.master) %>% 
  mutate_if(is.character, as.factor)

4 Occurence ANalysis

4.0.1 Boxplot SFEI

This is a boxplot with three panels for water, sediment, and fish tissue #### Water Matrices

#first transform data
water_SFEI_mesh_matrix <- sfBay_aligned %>% 
  filter(source == "SFEI") %>% 
  filter(particle.L.master >0,
         unaligned.particle.L.master > 0) %>% 
  mutate(apparatus.matrix = paste0(sample.matrix.specific, " (", Sampling.apparatus,")")) %>% 
  #filter(sample.matrix.specific == "surface water") %>% 
  drop_na(particle.L.master) %>% 
   dplyr::select(c(sampleID, unaligned.particle.L.master, particle.L.master,apparatus.matrix,
                   #Sampling.apparatus, sample.matrix.specific
                   )) %>% 
  pivot_longer(-c(sampleID, apparatus.matrix,
                  #Sampling.apparatus, sample.matrix.specific
                  ), names_to = "alignment", values_to = "concentration") %>% 
  #rename for easy plotting
  mutate(alignment_pretty = case_when(alignment == "particle.L.master" ~ "Aligned",
                                      alignment == "unaligned.particle.L.master" ~ "Unaligned")) %>% 
## PLOTTING ##
  ggplot(aes(y = concentration, x =factor(apparatus.matrix, level = c('surface water (Manta Trawl)',
                                                                      'surface water (1-L grab)',
                                                                      'stormwater (depth-integrated perisaltic pump)',
                                                                      'wastewater (Composite)')),
                                          color = alignment_pretty)) +
  #aligned
  geom_boxplot(notch = TRUE, width = 1, size = 1) +
 # ggbeeswarm::geom_quasirandom()+
 # geom_point(position=position_jitterdodge())+
 
  scale_color_manual(name = "Alignment",
                     values = hcl(c(0, 240),100,65, alpha=c(1,0.6)),
                     labels = c("Aligned (1 to 5,000 μm)",
                                "Unaligned")) +
    scale_y_log10(breaks = scales::log_breaks(n = 12),labels = comma_signif,
                   limits = c(1e-6, 10000))+
   # annotation_logticks(sides = "b")+ #log scale rick marks on bottom
  ylab(paste0("Particles/L"))+
  theme.type +
  theme(
    plot.title = element_text(hjust = 0.5, size = 18),
        plot.subtitle = element_text(hjust = 0.5, size = 14),
    axis.title.x = element_blank(),
    legend.title = element_blank(),
    legend.position = c(0.8,0.8),
    legend.text = element_text(size = 12, face = "bold"),
        legend.background = element_rect(fill = "white", color = "black"),
        legend.key.size = unit(1.3, 'cm'))

water_SFEI_mesh_matrix

####Sediment

#first transform data
sediment_SFEI_mesh_matrix <- sfBay_aligned %>% 
  filter(source == "SFEI") %>% 
  filter(particles.kg.master >0,
         particles.kg.blank.corrected.particle.corrected > 0) %>% 
  mutate(apparatus.matrix = paste0(sample.matrix.specific, " (", Sampling.apparatus,")")) %>% 
  #filter(sample.matrix.specific == "surface water") %>% 
  drop_na(particles.kg.master) %>% 
   dplyr::select(c(sampleID, particles.kg.blank.corrected.particle.corrected, particles.kg.master,apparatus.matrix,
                   #Sampling.apparatus, sample.matrix.specific
                   )) %>% 
  pivot_longer(-c(sampleID, apparatus.matrix,
                  #Sampling.apparatus, sample.matrix.specific
                  ), names_to = "alignment", values_to = "concentration") %>% 
  #rename for easy plotting
  mutate(alignment_pretty = case_when(alignment == "particles.kg.master" ~ "Aligned",
                                      alignment == "particles.kg.blank.corrected.particle.corrected" ~ "Unaligned")) %>% 
## PLOTTING ##
  ggplot(aes(y = concentration, x = apparatus.matrix, color = alignment_pretty)) +
  #aligned
  geom_boxplot(notch = TRUE, width = 1, size = 1) +
 # ggbeeswarm::geom_quasirandom()+
 # geom_point(position=position_jitterdodge())+
  
  scale_color_manual(name = "Alignment",
                     values = hcl(c(0, 240),100,65, alpha=c(1,0.6)),
                     labels = c("Aligned (1 to 5,000 μm)",
                                "Unaligned")) +
    scale_y_log10(breaks = scales::log_breaks(n = 5),labels = comma_signif,
                   limits = c(1, 10000))+
   # annotation_logticks(sides = "b")+ #log scale rick marks on bottom
  ylab(paste0("Particles/kg"))+
  theme.type +
  theme(
    plot.title = element_text(hjust = 0.5, size = 18),
        plot.subtitle = element_text(hjust = 0.5, size = 14),
    axis.title.x = element_blank(),
    legend.title = element_blank(),
    legend.position = c(0.8,0.8),
    legend.text = element_text(size = 12, face = "bold"),
        legend.background = element_rect(fill = "white", color = "black"),
        legend.key.size = unit(1.3, 'cm'))

sediment_SFEI_mesh_matrix

####fish

#first transform data
fish_SFEI_mesh_matrix <- sfBay_aligned %>% 
  filter(source == "SFEI") %>% 
  filter(particle.fish.master >0,
         particles.fish.blank.corrected.particle.corrected > 0) %>% 
  mutate(apparatus.matrix = paste0(sample.matrix.specific, " (", Sampling.apparatus,")")) %>% 
  #filter(sample.matrix.specific == "surface water") %>% 
  drop_na(particle.fish.master) %>% 
   dplyr::select(c(sampleID, particles.fish.blank.corrected.particle.corrected, particle.fish.master,apparatus.matrix,
                   #Sampling.apparatus, sample.matrix.specific
                   )) %>% 
  pivot_longer(-c(sampleID, apparatus.matrix,
                  #Sampling.apparatus, sample.matrix.specific
                  ), names_to = "alignment", values_to = "concentration") %>% 
  #rename for easy plotting
  mutate(alignment_pretty = case_when(alignment == "particle.fish.master" ~ "Aligned",
                                      alignment == "particles.fish.blank.corrected.particle.corrected" ~ "Unaligned")) %>% 
## PLOTTING ##
  ggplot(aes(y = concentration, x = apparatus.matrix, color = alignment_pretty)) +
  #aligned
  geom_boxplot(notch = TRUE, width = 1, size = 1) +
 # ggbeeswarm::geom_quasirandom()+
#  geom_point(position=position_jitterdodge())+
  
  scale_color_manual(name = "Alignment",
                     values = hcl(c(0, 240),100,65, alpha=c(1,0.6)),
                     labels = c("Aligned (1 to 5,000 μm)",
                                "Unaligned")) +
    scale_y_log10(breaks = scales::log_breaks(n = 5),labels = comma_signif,
                   limits = c(1, 1000))+
   # annotation_logticks(sides = "b")+ #log scale rick marks on bottom
  ylab(paste0("Particles/fish"))+
  theme.type +
  theme(
    plot.title = element_text(hjust = 0.5, size = 18),
        plot.subtitle = element_text(hjust = 0.5, size = 14),
    axis.title.x = element_blank(),
    legend.title = element_blank(),
    #legend.position = c(0.8,0.8),
    legend.text = element_text(size = 14, face = "bold"),
      #  legend.background = element_rect(fill = "white", color = "black"),
        legend.key.size = unit(2, 'cm'))

fish_SFEI_mesh_matrix

#### Arrangement

#get legend
leg <- get_legend(fish_SFEI_mesh_matrix)
#remove legend from other plots
water_SFEI_mesh_matrix <-  water_SFEI_mesh_matrix + theme(legend.position = "none")
sediment_SFEI_mesh_matrix <-  sediment_SFEI_mesh_matrix + theme(legend.position = "none")
fish_SFEI_mesh_matrix <-  fish_SFEI_mesh_matrix + theme(legend.position = "none")

boxplot <- ggarrange(water_SFEI_mesh_matrix, #first row with water matrices
          ggarrange(sediment_SFEI_mesh_matrix, fish_SFEI_mesh_matrix,  ncol = 2, labels = c("B", "C")), #second row with additional matrices
          nrow = 2,
          heights = c(1.4, 0.6),
          common.legend = TRUE,
          legend = "bottom",
          labels = c("A"))
boxplot

ggsave(plot = boxplot,
       filename = "boxplot.jpg",
       path = "output/figures/", 
       width = 12, height = 9, units = "in",
       bg = "white",
       dpi = 300)

4.1 ANOVA between water matrices for alignment

#easy cleanup
alignment_matrix <- sfBay_aligned %>% 
  filter(source == "SFEI") %>% 
  filter(sample.matrix == "water") %>% 
  filter(particle.L.master >0,
         unaligned.particle.L.master > 0) %>% 
  mutate(apparatus.matrix = paste0(sample.matrix.specific, " (", Sampling.apparatus,")")) %>% 
  #filter(sample.matrix.specific == "surface water") %>% 
  drop_na(particle.L.master) %>% 
   dplyr::select(c(sampleID, unaligned.particle.L.master, particle.L.master,apparatus.matrix,
                   #Sampling.apparatus, sample.matrix.specific
                   )) %>% 
  pivot_longer(-c(sampleID, apparatus.matrix,
                  #Sampling.apparatus, sample.matrix.specific
                  ), names_to = "alignment", values_to = "concentration") %>% 
  #rename for easy plotting
  mutate(alignment_pretty = case_when(alignment == "particle.L.master" ~ "Aligned",
                                      alignment == "unaligned.particle.L.master" ~ "Unaligned"))

# ANOVA
ANOVA_pre.alignment <- aov(concentration ~ apparatus.matrix,
                           data = alignment_matrix %>% filter(alignment_pretty == "Unaligned")) #only pre-aligned

summary(ANOVA_pre.alignment)
##                   Df Sum Sq Mean Sq F value   Pr(>F)    
## apparatus.matrix   3  239.3   79.77   25.22 6.32e-13 ***
## Residuals        130  411.2    3.16                     
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
tukey_pre <- TukeyHSD(ANOVA_pre.alignment)
tukey_pre_data <- as.data.frame(tukey_pre$apparatus.matrix)
write.csv(tukey_pre_data,
          "output/data/tukey_pre_alignment.csv")

tukey_pre
##   Tukey multiple comparisons of means
##     95% family-wise confidence level
## 
## Fit: aov(formula = concentration ~ apparatus.matrix, data = alignment_matrix %>% filter(alignment_pretty == "Unaligned"))
## 
## $apparatus.matrix
##                                                                                  diff
## surface water (1-L grab)-stormwater (depth-integrated perisaltic pump)    -1.55176728
## surface water (Manta Trawl)-stormwater (depth-integrated perisaltic pump) -3.79923837
## wastewater (Composite)-stormwater (depth-integrated perisaltic pump)      -3.78404542
## surface water (Manta Trawl)-surface water (1-L grab)                      -2.24747109
## wastewater (Composite)-surface water (1-L grab)                           -2.23227813
## wastewater (Composite)-surface water (Manta Trawl)                         0.01519295
##                                                                                 lwr
## surface water (1-L grab)-stormwater (depth-integrated perisaltic pump)    -3.045590
## surface water (Manta Trawl)-stormwater (depth-integrated perisaltic pump) -5.269286
## wastewater (Composite)-stormwater (depth-integrated perisaltic pump)      -5.529139
## surface water (Manta Trawl)-surface water (1-L grab)                      -3.154187
## wastewater (Composite)-surface water (1-L grab)                           -3.538588
## wastewater (Composite)-surface water (Manta Trawl)                        -1.263861
##                                                                                   upr
## surface water (1-L grab)-stormwater (depth-integrated perisaltic pump)    -0.05794423
## surface water (Manta Trawl)-stormwater (depth-integrated perisaltic pump) -2.32919120
## wastewater (Composite)-stormwater (depth-integrated perisaltic pump)      -2.03895196
## surface water (Manta Trawl)-surface water (1-L grab)                      -1.34075488
## wastewater (Composite)-surface water (1-L grab)                           -0.92596777
## wastewater (Composite)-surface water (Manta Trawl)                         1.29424655
##                                                                               p adj
## surface water (1-L grab)-stormwater (depth-integrated perisaltic pump)    0.0384711
## surface water (Manta Trawl)-stormwater (depth-integrated perisaltic pump) 0.0000000
## wastewater (Composite)-stormwater (depth-integrated perisaltic pump)      0.0000006
## surface water (Manta Trawl)-surface water (1-L grab)                      0.0000000
## wastewater (Composite)-surface water (1-L grab)                           0.0001078
## wastewater (Composite)-surface water (Manta Trawl)                        0.9999893
# ANOVA
ANOVA_post.alignment <- aov(concentration ~ apparatus.matrix,
                           data = alignment_matrix %>% filter(alignment_pretty == "Aligned")) #only pre-aligned

summary(ANOVA_post.alignment)
##                   Df  Sum Sq Mean Sq F value   Pr(>F)    
## apparatus.matrix   3 1937296  645765   17.35 1.56e-09 ***
## Residuals        130 4839671   37228                     
## ---
## Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1
tukey_post <- TukeyHSD(ANOVA_post.alignment)
tukey_post_data <- as.data.frame(tukey_post$apparatus.matrix)
write.csv(tukey_post_data,
          "output/data/tukey_post_alignment.csv")

tukey_post
##   Tukey multiple comparisons of means
##     95% family-wise confidence level
## 
## Fit: aov(formula = concentration ~ apparatus.matrix, data = alignment_matrix %>% filter(alignment_pretty == "Aligned"))
## 
## $apparatus.matrix
##                                                                                  diff
## surface water (1-L grab)-stormwater (depth-integrated perisaltic pump)      20.394533
## surface water (Manta Trawl)-stormwater (depth-integrated perisaltic pump) -224.626701
## wastewater (Composite)-stormwater (depth-integrated perisaltic pump)      -227.256588
## surface water (Manta Trawl)-surface water (1-L grab)                      -245.021234
## wastewater (Composite)-surface water (1-L grab)                           -247.651121
## wastewater (Composite)-surface water (Manta Trawl)                          -2.629887
##                                                                                 lwr
## surface water (1-L grab)-stormwater (depth-integrated perisaltic pump)    -141.6758
## surface water (Manta Trawl)-stormwater (depth-integrated perisaltic pump) -384.1175
## wastewater (Composite)-stormwater (depth-integrated perisaltic pump)      -416.5882
## surface water (Manta Trawl)-surface water (1-L grab)                      -343.3942
## wastewater (Composite)-surface water (1-L grab)                           -389.3775
## wastewater (Composite)-surface water (Manta Trawl)                        -141.3991
##                                                                                  upr
## surface water (1-L grab)-stormwater (depth-integrated perisaltic pump)     182.46490
## surface water (Manta Trawl)-stormwater (depth-integrated perisaltic pump)  -65.13587
## wastewater (Composite)-stormwater (depth-integrated perisaltic pump)       -37.92497
## surface water (Manta Trawl)-surface water (1-L grab)                      -146.64825
## wastewater (Composite)-surface water (1-L grab)                           -105.92469
## wastewater (Composite)-surface water (Manta Trawl)                         136.13935
##                                                                               p adj
## surface water (1-L grab)-stormwater (depth-integrated perisaltic pump)    0.9878199
## surface water (Manta Trawl)-stormwater (depth-integrated perisaltic pump) 0.0020108
## wastewater (Composite)-stormwater (depth-integrated perisaltic pump)      0.0116727
## surface water (Manta Trawl)-surface water (1-L grab)                      0.0000000
## wastewater (Composite)-surface water (1-L grab)                           0.0000719
## wastewater (Composite)-surface water (Manta Trawl)                        0.9999567

5 SFBay Exceedances

######REMOVE IF FIXING JOIN ABOVE!!!###
sfBay_new <- sfBay_aligned

#make new dataframe to plot both histograms together
sampleSimpleSFEI <- sfBay_new %>%
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  drop_na(Conc) %>% 
  droplevels()

#make new dataframe to plot both histograms together
dfSFEI <- rbind(sampleSimpleSFEI)#,food.dilution.simple)

#calculate exceedance
dfSFEI_exceedance <- dfSFEI %>% 
  mutate(aboveThreshold = factor(case_when(
    Conc < Threshold1 ~ "below Threshold 1",
    Conc >= Threshold1 & Conc < Threshold2 ~ "above Threshold 1",
    Conc >= Threshold2 & Conc < Threshold3 ~ "above Threshold 2",
    Conc >= Threshold3 & Conc < Threshold4 ~ "above Threshold 3",
    Conc >= Threshold4 ~ "above Threshold 4"
  )))

#give summary stat for exceedance
exceedance <- dfSFEI_exceedance  %>%
  filter(Sample.Type == "sample") %>% 
  dplyr::select(c(Conc, aboveThreshold)) %>%
  group_by(aboveThreshold) %>%
  dplyr::summarize(n = n()) %>% 
  mutate(rel.freq = paste0(round(100 * n/sum(n), 0), "%"))

exceedance
## # A tibble: 5 x 3
##   aboveThreshold        n rel.freq
##   <fct>             <int> <chr>   
## 1 above Threshold 1    24 22%     
## 2 above Threshold 2     3 3%      
## 3 above Threshold 3    11 10%     
## 4 above Threshold 4    38 36%     
## 5 below Threshold 1    31 29%

6 Sensitivity Analysis

To propagate uncertainty between the function of the proportion of plastic particles and correction factor , we approximate the new uncertainty using a 1st order Taylor series.

[https://my.che.utah.edu/~tony/img/Equations/error_prop/10_error_propagation_clip_image002_0004.gif]

probability_distributions.Rmd determines the size power law for marine surface waters in SF Bay of 1.89 +- 0.084 which is used to estiamte the uncertainty here

6.0.0.0.1 Align

https://nicoco007.github.io/Propagation-of-Uncertainty-Calculator/ is used to derive propoagation of uncertaint equation for Alpha

# used online calculator to derive correction factor SD for correction factor for 333 um mesh aligned to 1 to 5,000micron for alpha sd of 0.15
#result: 300.5
CF.1Lgrab.sd <- 29.3
CF.manta.trawl.sd <- 356.7
CF.sediment.sd <- 30.0
CF.stormwater.sd <- 5.5 #(based on 105 um mesh size )
CF.wastewater.sd <- 7.8
CF.fish.sd <- 6.06


#create dataframe with PDFs derived in probability_distributions.Rmd
alignment_factors <- data.frame("matrix" = c("Surface (1L-grab)", "Surface (Manta Trawl)", "Fish", "Storm", "WWTP", "Sediment"),
                                "CF.sd" = c(CF.1Lgrab.sd, CF.manta.trawl.sd, CF.fish.sd, CF.stormwater.sd, CF.wastewater.sd, CF.sediment.sd),
                                "alpha" = c(alpha.marine, alpha.marine, alpha.fish, alpha.stormwater, alpha.wastewater, alpha.sediment),
                                "alpha.sd" = c(alpha.marine.sd, alpha.marine.sd, alpha.fish.sd, alpha.stormwater.sd, alpha.wastewater.sd, alpha.sediment.sd),
                                "alpha.n" = c (alpha.marine.n, alpha.marine.n, alpha.fish.n, alpha.stormwater.n, alpha.wastewater.n, alpha.sediment.n)) %>% 
  mutate(alpha.se = alpha.sd / sqrt(alpha.n)) %>% 
  mutate(alpha.upper.68 = alpha + alpha.se,
         alpha.lower.68 = alpha - alpha.se,
         alpha.upper.95 = alpha + (1.96*alpha.se),
         alpha.lower.95 = alpha - (1.96*alpha.se),
         alpha.upper.99 = alpha + (3*alpha.se),
         alpha.lower.99 = alpha - (3*alpha.se),
         alpha.rsd = alpha.se / alpha) # value that's used in propagation of uncertainty

alignment_factors
##                  matrix  CF.sd alpha alpha.sd alpha.n   alpha.se alpha.upper.68
## 1     Surface (1L-grab)  29.30  2.00     0.15      23 0.03127716       2.031277
## 2 Surface (Manta Trawl) 356.70  2.00     0.15      23 0.03127716       2.031277
## 3                  Fish   6.06  1.75     0.17      15 0.04389381       1.793894
## 4                 Storm   5.50  1.87     0.13      22 0.02771609       1.897716
## 5                  WWTP   7.80  1.58     0.11      20 0.02459675       1.604597
## 6              Sediment  30.00  2.10     0.12      17 0.02910428       2.129104
##   alpha.lower.68 alpha.upper.95 alpha.lower.95 alpha.upper.99 alpha.lower.99
## 1       1.968723       2.061303       1.938697       2.093831       1.906169
## 2       1.968723       2.061303       1.938697       2.093831       1.906169
## 3       1.706106       1.836032       1.663968       1.881681       1.618319
## 4       1.842284       1.924324       1.815676       1.953148       1.786852
## 5       1.555403       1.628210       1.531790       1.653790       1.506210
## 6       2.070896       2.157044       2.042956       2.187313       2.012687
##    alpha.rsd
## 1 0.01563858
## 2 0.01563858
## 3 0.02508218
## 4 0.01482144
## 5 0.01556756
## 6 0.01385918
sfBay_new2 <- left_join(sfBay_new, alignment_factors, by = "matrix")

#align data for different scenarios
sensitivity <- sfBay_new2 %>%
  #derive correction factors
  mutate(#CF.upper.68 = CFfnx(a = alpha.upper.68, x1M = x1M, x2M = x2M, x1D = x1D_set, x2D = x2D_set),
         CF.upper.95 = CF + (1.96 * (CF.sd / sqrt(alpha.n))),
         #CF.upper.99 = CFfnx(a = alpha.upper.99, x1M = x1M, x2M = x2M, x1D = x1D_set, x2D = x2D_set),
         #CF.lower.68 = CFfnx(a = alpha.lower.68, x1M = x1M, x2M = x2M, x1D = x1D_set, x2D = x2D_set),
         CF.lower.95 = CF - (1.96 * (CF.sd / sqrt(alpha.n))),
         #CF.lower.99 = CFfnx(a = alpha.lower.99, x1M = x1M, x2M = x2M, x1D = x1D_set, x2D = x2D_set)
         )%>%
  #apply correction fcators
  mutate(#conc.upper.68 = case_when(sample.matrix.specific == "surface water" ~ CF.upper.68 * unaligned.particle.L.master,
          #                         sample.matrix == "sediment" ~ CF.upper.68 * particles.kg.blank.corrected.particle.corrected,
           #                        sample.matrix == "fish" ~ CF.upper.68 * particles.fish.blank.corrected.particle.corrected),
         conc.upper.95 =  case_when(sample.matrix == "water" ~ CF.upper.95 * particles.L.blank.corrected.particle.corrected.fiber.corrected,
                                   sample.matrix == "sediment" ~ CF.upper.95 * particles.kg.blank.corrected.particle.corrected,
                                   sample.matrix == "fish" ~ CF.upper.95 * particles.fish.blank.corrected.particle.corrected),
         #conc.upper.99 =  case_when(sample.matrix.specific == "surface water" ~ CF.upper.99 * unaligned.particle.L.master,
          #                         sample.matrix == "sediment" ~ CF.upper.99 * particles.kg.blank.corrected.particle.corrected,
           #                        sample.matrix == "fish" ~ CF.upper.99 * particles.fish.blank.corrected.particle.corrected),
         ## lower intervals
        # conc.lower.68 = case_when(sample.matrix.specific == "surface water" ~ CF.lower.68 * unaligned.particle.L.master,
         #                          sample.matrix == "sediment" ~ CF.lower.68 * particles.kg.blank.corrected.particle.corrected,
          #                         sample.matrix == "fish" ~ CF.lower.68 * particles.fish.blank.corrected.particle.corrected),
         conc.lower.95 =  case_when(sample.matrix == "water" ~ CF.lower.95 * particles.L.blank.corrected.particle.corrected.fiber.corrected,
                                   sample.matrix == "sediment" ~ CF.lower.95 * particles.kg.blank.corrected.particle.corrected,
                                   sample.matrix == "fish" ~ CF.lower.95 * particles.fish.blank.corrected.particle.corrected)#,
         #conc.lower.99 =  case_when(sample.matrix.specific == "surface water" ~ CF.lower.99 * unaligned.particle.L.master,
          #                         sample.matrix == "sediment" ~ CF.lower.99 * particles.kg.blank.corrected.particle.corrected,
           #                        sample.matrix == "fish" ~ CF.lower.99 * particles.fish.blank.corrected.particle.corrected)
  ) %>%
  ####propagate uncertainty between alignment and plastic proportion correction####
# first convert uncertainties into percentages
#calcualted relative standard deviation for concentration factor
  mutate(CF.rsd = CF.sd / CF) %>% 
  #calculate plastic proportions relative standard deviation (%)#
  mutate(proportion.rsd = proportion.sd / proportion) %>% 
  #Calculate fiber proportion relative SD (%)##
  mutate(fiber.correction.rsd = fiber.correction.sd / fiber.correction) %>% 
  ## next calculate uncertainty of proportion x alignment x fiber correction factor
  mutate(combined.rsd = sqrt(CF.rsd ^ 2 + proportion.rsd ^ 2 + fiber.correction.rsd ^ 2)) %>% 
  #now calculate combined uncertainty
  mutate(conc.combined.sd = Conc * combined.rsd) %>% 
  #now calculate combined CI's
   mutate(conc.combined.upper.95 = Conc + 1.96 * (conc.combined.sd / sqrt(fiber.correction.n)), #use smallest N
          conc.combined.lower.95 = Conc - 1.96 * (conc.combined.sd / sqrt(fiber.correction.n))) %>% 
 #  #recalculate alignment 95% CI's using actual SD
 #mutate(conc.upper.95.alignment = Conc + 1.96 * (surface.water.CF.rsd * unaligned.particle.L.master),
  #      conc.lower.95.alignment = Conc - 1.96 * (surface.water.CF.rsd * unaligned.particle.L.master))# %>%
 #  #calculate proportion 95% CI's
    mutate(conc.upper.95.proportion = Conc + 1.96 * (proportion.rsd * Conc)  / sqrt(proportion.n),
           conc.lower.95.proportion = Conc - 1.96 * (proportion.rsd * Conc) / sqrt(proportion.n)) %>%
  #Calculate fiber proportion uncertainty
  mutate(conc.upper.95.fiber = Conc + 1.96 * (proportion.rsd * Conc)  / sqrt(proportion.n),
           conc.lower.95.fiber = Conc - 1.96 * (fiber.correction.rsd * Conc) / sqrt(fiber.correction.n)) 
    

sensitivity
##                                              sampleID
## 1                                  17-POC-438-125&355
## 2                                  17-POC-259-125&355
## 3                       20180406MMPStormSBCCMP125&355
## 4                                  17-POC-283-125&355
## 5                                  17-POC-515-125&355
## 6                                  17-POC-100-125&355
## 7                                  17-POC-130-125&355
## 8                                    17GR-003-125&355
## 9                       20180108MMPStormSBSMMP125&355
## 10                      20180108MMPStormCBMeek125&355
## 11                     20180108MMPStormCBEmery125&355
## 12                                 19-POC-198-125&355
## 13                                   EBDA Aug 31 2017
## 14                                  EBDA Sept 26 2017
## 15                                  EBMUD Aug 22 2017
## 16                                 EBMUD Sept 26 2017
## 17                                      PA Aug 1 2017
## 18                                  PA July 20 2017 A
## 19                                     SJ Aug 10 2017
## 20                                    SJ Sept 19 2017
## 21                                  SUNN Sept 19 2017
## 22                                  CCCSD Sept 7 2017
## 23                                   FSSD Aug 23 2017
## 24                                   FSSD Sept 7 2017
## 25                                  EBMUD Oct 20 2017
## 26                                   SFPUC Nov 6 2017
## 27                                   SFPUC Nov 7 2017
## 28                                   SUNN Oct 17 2017
## 29                                   CCCSD Dec 6 2017
## 30                                         AN LSB06_1
## 31                                         AN LSB06_2
## 32                                         AN LSB06_4
## 33                                         TS LSB06_1
## 34                                         TS LSB06_2
## 35                                         TS LSB06_3
## 36                                         TS LSB06_4
## 37                                         AN LSB06_3
## 38                                         TS LSB06_5
## 39                                         TS LSB06_6
## 40                                         TS LSB06_7
## 41                                         TS LSB06_8
## 42                                         TS LSB06_9
## 43                                        TS LSB06_10
## 44                                         AN TB101_1
## 45                                         AN TB101_2
## 46                                         AN TB101_3
## 47                                         AN TB101_4
## 48                                         AN TB101_5
## 49                                         AN TB101_6
## 50                                         AN TB101_7
## 51                                         AN TB101_8
## 52                                         AN TB101_9
## 53                                        AN TB101_10
## 54                                         AN TB102_1
## 55                                         AN TB102_2
## 56                                         AN TB102_3
## 57                                         AN TB102_4
## 58                                         AN TB102_5
## 59                                         AN TB102_6
## 60                                         AN TB102_7
## 61                                         AN TB102_8
## 62                                         AN TB102_9
## 63                                        AN TB102_10
## 64                                         TS TB101_1
## 65                                         TS TB101_2
## 66                                         TS TB101_3
## 67                                         TS TB101_4
## 68                                         TS TB101_5
## 69                                         TS TB101_6
## 70                                         TS TB101_7
## 71                                         TS TB101_8
## 72                                         TS TB101_9
## 73                                        TS TB101_10
## 74                                         TS CB106_1
## 75                                         TS CB106_2
## 76                                         TS CB106_3
## 77                                         TS CB106_4
## 78                                         TS CB106_5
## 79                                         TS CB106_6
## 80                                         TS CB106_7
## 81                                         TS CB106_8
## 82                                         TS CB106_9
## 83                                        TS CB106_10
## 84                                         AN CB106_1
## 85                                         AN CB106_2
## 86                                         AN CB106_3
## 87                                         AN CB106_4
## 88                                         AN CB106_5
## 89                                         AN CB106_6
## 90                                         AN CB106_7
## 91                                         AN CB106_8
## 92                                         AN CB106_9
## 93                                        AN CB106_10
## 94                                         AN CB010_1
## 95                                         AN CB010_2
## 96                                         AN CB010_4
## 97                                         AN CB010_3
## 98                                         AN CB010_5
## 99                                         AN CB010_6
## 100                                        AN CB010_7
## 101                                        AN CB010_8
## 102                                        AN CB010_9
## 103                                       AN CB010_10
## 104                                        TS CB010_1
## 105                                        TS CB010_2
## 106                                        TS CB010_3
## 107                                        TS CB010_4
## 108                                        TS CB010_5
## 109                                        TS CB010_6
## 110                                        TS CB010_7
## 111                                        TS CB010_8
## 112                                       AN SOSL40_1
## 113                                       AN SOSL40_2
## 114                                       AN SOSL40_3
## 115                                       AN SOSL40_4
## 116                                       AN SOSL40_5
## 117                                       AN SOSL40_6
## 118                                       AN SOSL40_7
## 119                                       AN SOSL40_8
## 120                                       AN SOSL40_9
## 121                                      AN SOSL40_10
## 122                                        AN SB074_1
## 123                                        AN SB074_2
## 124                                        AN SB074_3
## 125                                        AN SB074_4
## 126                                        AN SB074_5
## 127                                        AN SB074_6
## 128                                        AN SB074_7
## 129                                        AN SB074_8
## 130                                        AN SB074_9
## 131                                       AN SB074_10
## 132                                        TS SB074_1
## 133                                        TS SB074_2
## 134                                        TS SB074_3
## 135                                        TS SB074_4
## 136                                        TS SB074_5
## 137                                        TS SB074_6
## 138                                        TS SB074_7
## 139                                        TS SB074_8
## 140                                        TS SB074_9
## 141                                       TS SB074_10
## 142                                        AN CB037_1
## 143                                        AN CB037_2
## 144                                        AN CB037_3
## 145                                        AN CB037_4
## 146                                        AN CB037_5
## 147                                        AN CB037_6
## 148                                        AN CB037_7
## 149                                        AN CB037_8
## 150                                        AN CB037_9
## 151                                       AN CB037_10
## 152                                        TS CB037_1
## 153                                        TS CB037_2
## 154                                        TS CB037_3
## 155                                        TS CB037_4
## 156                                        TS CB037_5
## 157                                        TS CB037_6
## 158                                        TS CB037_7
## 159                                        TS CB037_8
## 160                                        TS CB037_9
## 161                                       TS CB037_10
## 162                                       TS SOSL40_1
## 163                                       TS SOSL40_2
## 164                                       TS SOSL40_3
## 165                                       TS SOSL40_4
## 166                                       TS SOSL40_5
## 167                                       TS SOSL40_6
## 168                                       TS SOSL40_7
## 169                                       TS SOSL40_8
## 170                                       TS SOSL40_9
## 171                                      TS SOSL40_10
## 172                                        TS TB102_1
## 173                                        TS TB102_2
## 174                                        TS TB102_3
## 175                                        TS TB102_4
## 176                                        TS TB102_5
## 177                                        TS TB102_6
## 178                                        TS TB102_7
## 179                                        TS TB102_8
## 180                                        TS TB102_9
## 181                                       TS TB102_10
## 182                                     RMP_14SC_1153
## 183                               15RMPMC_CB10_MP1
## 184                                  15RMPMC-CB15-MP1
## 185                                  15RMPMC_CB32_MP1
## 186                                15RMPC_CB37_MP1
## 187                                17MMP_S_LSB02_MP_1
## 188                                17MMP_S_LSB04_MP_1
## 189                                  17MMP-S-LSB06-MP
## 190                                  15RMP_14SC_1270 
## 191                                17MMP_S_SB051_MP_1
## 192                                  17MMP_SB056_MP_1
## 193                                17MMP_S_SB074_MP_1
## 194                               17MMP_S_SOSL16_MP_1
## 195                                17MMP_S_SOSL40_MP1
## 196                                 17MMP-S-SPB128-MP
## 197                                 17MMP_S_SPB15_MP1
## 198                                  17MMP-S-SUB52-MP
## 199                                  17MMP_S_SUB53_MP
## 200                                  17MMP_S_TB101_MP
## 201                                  17MMP_S_TB102_MP
## 202                                        CB4 Aug 21
## 203                           CB4 Richmond Bdg Nov 16
## 204                                        CB5 Aug 22
## 205                                        CB5 Nov 16
## 206                                         CB5 Nov 5
## 207                                        CB6 Aug 22
## 208                                        CB6 Nov 16
## 209                                    CB7 Aug 22 DUP
## 210                             CB7 Bay Bridge Nov 16
## 211                                        CB8 Aug 25
## 212                                        CB8 Jan 11
## 213                                        CB9 Aug 22
## 214                                  CB9 Jan 11 Total
## 215                                    CBNMS22 Mar 30
## 216                                   CBNMS22 Sept 12
## 217                                    CBNMS23 Mar 29
## 218                                   CBNMS23 Sept 12
## 219                                   CBNMS24 Sept 13
## 220                                    GFNMS24 Mar 29
## 221                                    GFNMS25 Mar 30
## 222                                   GFNMS25 Sept 11
## 223                                    GFNMS26 Mar 29
## 224                                   GFNMS26 Sept 12
## 225                                  GFNMS27 March 29
## 226                                   GFNMS27 Sept 13
## 227                                    GFNMS28 Mar 30
## 228                               GFNMS28 DUP Sept 13
## 229                                      LSB14 Aug 24
## 230                                       LSB14 Mar 6
## 231                                      LSB15 Aug 24
## 232                                       LSB15 Mar 6
## 233                                      LSB16 Aug 24
## 234                                       LSB16 Mar 6
## 235                               MBNMS29 Jan 11 2018
## 236                                    MBNMS29 Mar 30
## 237                               MBNMS29 Nov 17 2017
## 238                                   MBNMS29 Sept 13
## 239                                    MBNMS30 Mar 31
## 240                                   MBNMS30 Sept 27
## 241                                    MBNMS31 Mar 31
## 242                                   MBNMS31 Sept 27
## 243                                    MBNMS32 Mar 31
## 244                                   MBNMS32 Sept 27
## 245                                       SB10 Aug 23
## 246                                       SB10 Mar 19
## 247                                       SB11 Aug 23
## 248                                       SB11 Mar 19
## 249                                       SB12 Aug 23
## 250                                       SB12 Mar 19
## 251                                       SB13 Aug 23
## 252                                       SB13 Mar 19
## 253                    SF Bay Treasure Island Sept 18
## 254                                  SPB2 Aug 21 2017
## 255                                       SPB2 Nov 16
## 256                                       SPB3 Aug 21
## 257                                       SPB3 Nov 17
## 258                                       SUB1 Aug 21
## 259                                       SUB1 Nov 17
## 260                                   CB4 Aug 21 grab
## 261                                   CB4 Nov 22 grab
## 262                                   CB5 Aug 22 grab
## 263                                   CB5 Nov 22 grab
## 264                                   CB6 Aug 22 grab
## 265                                   CB6 Nov 22 grab
## 266                                   CB7 Aug 22 grab
## 267                                   CB7 Nov 22 grab
## 268                                   CB8 Aug 22 grab
## 269                                   CB8 Jan 11 grab
## 270                                   CB9 Aug 22 grab
## 271                                   CB9 Jan 22 grab
## 272                              CBNMS22 Sept 12 grab
## 273                               CBNMS23 Sep 22 grab
## 274                               CBNMS24 Sep 22 grab
## 275                         GFNMS/MBNMS29 Jan 22 grab
## 276                               GFNMS25 Mar 22 grab
## 277                              GFNMS25 Sept 11 grab
## 278                              GFNMS26 Sept 12 grab
## 279                               GFNMS27 Sep 22 grab
## 280               GFNMS28 (DUP for Manta) Sep 22 grab
## 281                                 LSB14 Mar 22 grab
## 282 LSB15 (corrected from LSB14 to LSB15) Mar 22 grab
## 283                                 LSB16 Aug 22 grab
## 284                                 LSB16 Mar 22 grab
## 285           MBNMS26 (GFNMS26 on bottle) Mar 22 grab
## 286                    MBNMS28 (GFNMS28?) Mar 22 grab
## 287                               MBNMS29 Mar 30 grab
## 288                               MBNMS29 Nov 22 grab
## 289                              MBNMS29 Sept 13 grab
## 290            MBNMS30 Mar 30 (Mar 31 for Manta) grab
## 291                               MBNMS30 Sep 22 grab
## 292                               MBNMS31 Mar 22 grab
## 293                               MBNMS31 Sep 22 grab
## 294                               MBNMS32 Mar 22 grab
## 295                               MBNMS32 Sep 22 grab
## 296                                  SB10 Aug 22 grab
## 297                                  SB10 Mar 22 grab
## 298                                  SB11 Aug 22 grab
## 299                                  SB11 Mar 22 grab
## 300                                  SB12 Mar 19 grab
## 301                                  SB13 Aug 23 grab
## 302                                  SB13 Mar 22 grab
## 303                             SPB2 Aug 21 2017 grab
## 304                                  SPB2 Nov 16 grab
## 305                                  SPB3 Aug 22 grab
## 306                                  SPB3 Nov 22 grab
## 307                                  SUB1 Aug 22 grab
## 308                                  SUB1 Nov 22 grab
##                            specific.location  System         Sampling.location
## 1   Rodeo Creek at Seacliff Ct Pedestrian Br Estuary                      <NA>
## 2               Refugio Creek at Tsushima St Estuary                      <NA>
## 3                               Coyote Creek Estuary                      <NA>
## 4                 Colma Ck at S. Linden Blvd Estuary                      <NA>
## 5              Line 12K at Coliseum Entrance Estuary                      <NA>
## 6                Line 12F below PG&E station Estuary                      <NA>
## 7                   Line 12J at mouth to 12K Estuary                      <NA>
## 8             Guadalupe River at Highway 101 Estuary                      <NA>
## 9                            San Mateo Creek Estuary                      <NA>
## 10             Meeker Slough at Regatta Blvd Estuary                      <NA>
## 11                        MMP-Storm-CB-Emery Estuary                      <NA>
## 12                                  12M Rep1 Estuary                      <NA>
## 13                                      <NA> Estuary                      <NA>
## 14                                      <NA> Estuary                      <NA>
## 15                                      <NA> Estuary                      <NA>
## 16                                      <NA> Estuary                      <NA>
## 17                                      <NA> Estuary                      <NA>
## 18                                      <NA> Estuary                      <NA>
## 19                                      <NA> Estuary                      <NA>
## 20                                      <NA> Estuary                      <NA>
## 21                                      <NA> Estuary                      <NA>
## 22                                      <NA> Estuary                      <NA>
## 23                                      <NA> Estuary                      <NA>
## 24                                      <NA> Estuary                      <NA>
## 25                                      <NA> Estuary                      <NA>
## 26                                      <NA> Estuary                      <NA>
## 27                                      <NA> Estuary                      <NA>
## 28                                      <NA> Estuary                      <NA>
## 29                                      <NA> Estuary                      <NA>
## 30                                      <NA> Estuary           Lower South Bay
## 31                                      <NA> Estuary           Lower South Bay
## 32                                      <NA> Estuary           Lower South Bay
## 33                                      <NA> Estuary           Lower South Bay
## 34                                      <NA> Estuary           Lower South Bay
## 35                                      <NA> Estuary           Lower South Bay
## 36                                      <NA> Estuary           Lower South Bay
## 37                                      <NA> Estuary           Lower South Bay
## 38                                      <NA> Estuary           Lower South Bay
## 39                                      <NA> Estuary           Lower South Bay
## 40                                      <NA> Estuary           Lower South Bay
## 41                                      <NA> Estuary           Lower South Bay
## 42                                      <NA> Estuary           Lower South Bay
## 43                                      <NA> Estuary           Lower South Bay
## 44                                      <NA> Estuary               Tomales Bay
## 45                                      <NA> Estuary               Tomales Bay
## 46                                      <NA> Estuary               Tomales Bay
## 47                                      <NA> Estuary               Tomales Bay
## 48                                      <NA> Estuary               Tomales Bay
## 49                                      <NA> Estuary               Tomales Bay
## 50                                      <NA> Estuary               Tomales Bay
## 51                                      <NA> Estuary               Tomales Bay
## 52                                      <NA> Estuary               Tomales Bay
## 53                                      <NA> Estuary               Tomales Bay
## 54                                      <NA> Estuary               Tomales Bay
## 55                                      <NA> Estuary               Tomales Bay
## 56                                      <NA> Estuary               Tomales Bay
## 57                                      <NA> Estuary               Tomales Bay
## 58                                      <NA> Estuary               Tomales Bay
## 59                                      <NA> Estuary               Tomales Bay
## 60                                      <NA> Estuary               Tomales Bay
## 61                                      <NA> Estuary               Tomales Bay
## 62                                      <NA> Estuary               Tomales Bay
## 63                                      <NA> Estuary               Tomales Bay
## 64                                      <NA> Estuary               Tomales Bay
## 65                                      <NA> Estuary               Tomales Bay
## 66                                      <NA> Estuary               Tomales Bay
## 67                                      <NA> Estuary               Tomales Bay
## 68                                      <NA> Estuary               Tomales Bay
## 69                                      <NA> Estuary               Tomales Bay
## 70                                      <NA> Estuary               Tomales Bay
## 71                                      <NA> Estuary               Tomales Bay
## 72                                      <NA> Estuary               Tomales Bay
## 73                                      <NA> Estuary               Tomales Bay
## 74                                      <NA> Estuary               Central Bay
## 75                                      <NA> Estuary               Central Bay
## 76                                      <NA> Estuary               Central Bay
## 77                                      <NA> Estuary               Central Bay
## 78                                      <NA> Estuary               Central Bay
## 79                                      <NA> Estuary               Central Bay
## 80                                      <NA> Estuary               Central Bay
## 81                                      <NA> Estuary               Central Bay
## 82                                      <NA> Estuary               Central Bay
## 83                                      <NA> Estuary               Central Bay
## 84                                      <NA> Estuary               Central Bay
## 85                                      <NA> Estuary               Central Bay
## 86                                      <NA> Estuary               Central Bay
## 87                                      <NA> Estuary               Central Bay
## 88                                      <NA> Estuary               Central Bay
## 89                                      <NA> Estuary               Central Bay
## 90                                      <NA> Estuary               Central Bay
## 91                                      <NA> Estuary               Central Bay
## 92                                      <NA> Estuary               Central Bay
## 93                                      <NA> Estuary               Central Bay
## 94                                      <NA> Estuary               Central Bay
## 95                                      <NA> Estuary               Central Bay
## 96                                      <NA> Estuary               Central Bay
## 97                                      <NA> Estuary               Central Bay
## 98                                      <NA> Estuary               Central Bay
## 99                                      <NA> Estuary               Central Bay
## 100                                     <NA> Estuary               Central Bay
## 101                                     <NA> Estuary               Central Bay
## 102                                     <NA> Estuary               Central Bay
## 103                                     <NA> Estuary               Central Bay
## 104                                     <NA> Estuary               Central Bay
## 105                                     <NA> Estuary               Central Bay
## 106                                     <NA> Estuary               Central Bay
## 107                                     <NA> Estuary               Central Bay
## 108                                     <NA> Estuary               Central Bay
## 109                                     <NA> Estuary               Central Bay
## 110                                     <NA> Estuary               Central Bay
## 111                                     <NA> Estuary               Central Bay
## 112                                     <NA> Estuary                      <NA>
## 113                                     <NA> Estuary                      <NA>
## 114                                     <NA> Estuary                      <NA>
## 115                                     <NA> Estuary                      <NA>
## 116                                     <NA> Estuary                      <NA>
## 117                                     <NA> Estuary                      <NA>
## 118                                     <NA> Estuary                      <NA>
## 119                                     <NA> Estuary                      <NA>
## 120                                     <NA> Estuary                      <NA>
## 121                                     <NA> Estuary                      <NA>
## 122                                     <NA> Estuary                 South Bay
## 123                                     <NA> Estuary                 South Bay
## 124                                     <NA> Estuary                 South Bay
## 125                                     <NA> Estuary                 South Bay
## 126                                     <NA> Estuary                 South Bay
## 127                                     <NA> Estuary                 South Bay
## 128                                     <NA> Estuary                 South Bay
## 129                                     <NA> Estuary                 South Bay
## 130                                     <NA> Estuary                 South Bay
## 131                                     <NA> Estuary                 South Bay
## 132                                     <NA> Estuary                 South Bay
## 133                                     <NA> Estuary                 South Bay
## 134                                     <NA> Estuary                 South Bay
## 135                                     <NA> Estuary                 South Bay
## 136                                     <NA> Estuary                 South Bay
## 137                                     <NA> Estuary                 South Bay
## 138                                     <NA> Estuary                 South Bay
## 139                                     <NA> Estuary                 South Bay
## 140                                     <NA> Estuary                 South Bay
## 141                                     <NA> Estuary                 South Bay
## 142                                     <NA> Estuary               Central Bay
## 143                                     <NA> Estuary               Central Bay
## 144                                     <NA> Estuary               Central Bay
## 145                                     <NA> Estuary               Central Bay
## 146                                     <NA> Estuary               Central Bay
## 147                                     <NA> Estuary               Central Bay
## 148                                     <NA> Estuary               Central Bay
## 149                                     <NA> Estuary               Central Bay
## 150                                     <NA> Estuary               Central Bay
## 151                                     <NA> Estuary               Central Bay
## 152                                     <NA> Estuary               Central Bay
## 153                                     <NA> Estuary               Central Bay
## 154                                     <NA> Estuary               Central Bay
## 155                                     <NA> Estuary               Central Bay
## 156                                     <NA> Estuary               Central Bay
## 157                                     <NA> Estuary               Central Bay
## 158                                     <NA> Estuary               Central Bay
## 159                                     <NA> Estuary               Central Bay
## 160                                     <NA> Estuary               Central Bay
## 161                                     <NA> Estuary               Central Bay
## 162                                     <NA> Estuary                      SOSL
## 163                                     <NA> Estuary                      SOSL
## 164                                     <NA> Estuary                      SOSL
## 165                                     <NA> Estuary                      SOSL
## 166                                     <NA> Estuary                      SOSL
## 167                                     <NA> Estuary                      SOSL
## 168                                     <NA> Estuary                      SOSL
## 169                                     <NA> Estuary                      SOSL
## 170                                     <NA> Estuary                      SOSL
## 171                                     <NA> Estuary                      SOSL
## 172                                     <NA> Estuary               Tomales Bay
## 173                                     <NA> Estuary               Tomales Bay
## 174                                     <NA> Estuary               Tomales Bay
## 175                                     <NA> Estuary               Tomales Bay
## 176                                     <NA> Estuary               Tomales Bay
## 177                                     <NA> Estuary               Tomales Bay
## 178                                     <NA> Estuary               Tomales Bay
## 179                                     <NA> Estuary               Tomales Bay
## 180                                     <NA> Estuary               Tomales Bay
## 181                                     <NA> Estuary               Tomales Bay
## 182                                     <NA> Estuary                        SC
## 183                                     <NA> Estuary               Central Bay
## 184                                     <NA> Estuary               Central Bay
## 185                                     <NA> Estuary               Central Bay
## 186                                     <NA> Estuary               Central Bay
## 187                                     <NA> Estuary           Lower South Bay
## 188                                     <NA> Estuary           Lower South Bay
## 189                                     <NA> Estuary           Lower South Bay
## 190                                     <NA> Estuary                        SC
## 191                                     <NA> Estuary                 South Bay
## 192                                     <NA> Estuary                 South Bay
## 193                                     <NA> Estuary                 South Bay
## 194                                     <NA> Estuary                      SOSL
## 195                                     <NA> Estuary                      SOSL
## 196                                     <NA> Estuary                       SPB
## 197                                     <NA> Estuary                       SPB
## 198                                     <NA> Estuary                       SUB
## 199                                     <NA> Estuary                       SUB
## 200                                     <NA> Estuary               Tomales Bay
## 201                                     <NA> Estuary               Tomales Bay
## 202                                     <NA> Estuary               Central Bay
## 203                                     <NA> Estuary               Central Bay
## 204                                     <NA> Estuary               Central Bay
## 205                                     <NA> Estuary               Central Bay
## 206                                     <NA> Estuary               Central Bay
## 207                                     <NA> Estuary               Central Bay
## 208                                     <NA> Estuary               Central Bay
## 209                                     <NA> Estuary               Central Bay
## 210                                     <NA> Estuary               Central Bay
## 211                                     <NA> Estuary               Central Bay
## 212                                     <NA> Estuary               Central Bay
## 213                                     <NA> Estuary               Central Bay
## 214                                     <NA> Estuary               Central Bay
## 215                                     <NA> Estuary National Marine Sancturay
## 216                                     <NA> Estuary National Marine Sancturay
## 217                                     <NA> Estuary National Marine Sancturay
## 218                                     <NA> Estuary National Marine Sancturay
## 219                                     <NA> Estuary National Marine Sancturay
## 220                                     <NA> Estuary National Marine Sancturay
## 221                                     <NA> Estuary National Marine Sancturay
## 222                                     <NA> Estuary National Marine Sancturay
## 223                                     <NA> Estuary National Marine Sancturay
## 224                                     <NA> Estuary National Marine Sancturay
## 225                                     <NA> Estuary National Marine Sancturay
## 226                                     <NA> Estuary National Marine Sancturay
## 227                                     <NA> Estuary National Marine Sancturay
## 228                                     <NA> Estuary National Marine Sancturay
## 229                                     <NA> Estuary           Lower South Bay
## 230                                     <NA> Estuary           Lower South Bay
## 231                                     <NA> Estuary           Lower South Bay
## 232                                     <NA> Estuary           Lower South Bay
## 233                                     <NA> Estuary           Lower South Bay
## 234                                     <NA> Estuary           Lower South Bay
## 235                                     <NA> Estuary National Marine Sancturay
## 236                                     <NA> Estuary National Marine Sancturay
## 237                                     <NA> Estuary National Marine Sancturay
## 238                                     <NA> Estuary National Marine Sancturay
## 239                                     <NA> Estuary National Marine Sancturay
## 240                                     <NA> Estuary National Marine Sancturay
## 241                                     <NA> Estuary National Marine Sancturay
## 242                                     <NA> Estuary National Marine Sancturay
## 243                                     <NA> Estuary National Marine Sancturay
## 244                                     <NA> Estuary National Marine Sancturay
## 245                                     <NA> Estuary                 South Bay
## 246                                     <NA> Estuary                 South Bay
## 247                                     <NA> Estuary                 South Bay
## 248                                     <NA> Estuary                 South Bay
## 249                                     <NA> Estuary                 South Bay
## 250                                     <NA> Estuary                 South Bay
## 251                                     <NA> Estuary                 South Bay
## 252                                     <NA> Estuary                 South Bay
## 253                                     <NA> Estuary           Treasure Island
## 254                                     <NA> Estuary                       SPB
## 255                                     <NA> Estuary                       SPB
## 256                                     <NA> Estuary                       SPB
## 257                                     <NA> Estuary                       SPB
## 258                                     <NA> Estuary                       SUB
## 259                                     <NA> Estuary                       SUB
## 260                                     <NA> Estuary               Central Bay
## 261                                     <NA> Estuary               Central Bay
## 262                                     <NA> Estuary               Central Bay
## 263                                     <NA> Estuary               Central Bay
## 264                                     <NA> Estuary               Central Bay
## 265                                     <NA> Estuary               Central Bay
## 266                                     <NA> Estuary               Central Bay
## 267                                     <NA> Estuary               Central Bay
## 268                                     <NA> Estuary               Central Bay
## 269                                     <NA> Estuary               Central Bay
## 270                                     <NA> Estuary               Central Bay
## 271                                     <NA> Estuary               Central Bay
## 272                                     <NA> Estuary National Marine Sancturay
## 273                                     <NA> Estuary National Marine Sancturay
## 274                                     <NA> Estuary National Marine Sancturay
## 275                                     <NA> Estuary National Marine Sancturay
## 276                                     <NA> Estuary National Marine Sancturay
## 277                                     <NA> Estuary National Marine Sancturay
## 278                                     <NA> Estuary National Marine Sancturay
## 279                                     <NA> Estuary National Marine Sancturay
## 280                                     <NA> Estuary National Marine Sancturay
## 281                                     <NA> Estuary           Lower South Bay
## 282                                     <NA> Estuary           Lower South Bay
## 283                                     <NA> Estuary           Lower South Bay
## 284                                     <NA> Estuary           Lower South Bay
## 285                                     <NA> Estuary National Marine Sancturay
## 286                                     <NA> Estuary National Marine Sancturay
## 287                                     <NA> Estuary National Marine Sancturay
## 288                                     <NA> Estuary National Marine Sancturay
## 289                                     <NA> Estuary National Marine Sancturay
## 290                                     <NA> Estuary National Marine Sancturay
## 291                                     <NA> Estuary National Marine Sancturay
## 292                                     <NA> Estuary National Marine Sancturay
## 293                                     <NA> Estuary National Marine Sancturay
## 294                                     <NA> Estuary National Marine Sancturay
## 295                                     <NA> Estuary National Marine Sancturay
## 296                                     <NA> Estuary                 South Bay
## 297                                     <NA> Estuary                 South Bay
## 298                                     <NA> Estuary                 South Bay
## 299                                     <NA> Estuary                 South Bay
## 300                                     <NA> Estuary                 South Bay
## 301                                     <NA> Estuary                 South Bay
## 302                                     <NA> Estuary                 South Bay
## 303                                     <NA> Estuary                       SPB
## 304                                     <NA> Estuary                       SPB
## 305                                     <NA> Estuary                       SPB
## 306                                     <NA> Estuary                       SPB
## 307                                     <NA> Estuary                       SUB
## 308                                     <NA> Estuary                       SUB
##      latitude   longitude particles.L.blank.corrected
## 1      38.016    -122.254                   1.6300000
## 2      38.018    -122.277                   1.6500000
## 3   37.385832 -121.909581                   7.2000000
## 4       37.65    -122.412                   5.6300000
## 5      37.754    -122.204                   4.9400000
## 6      37.762    -122.214                   8.4300000
## 7      37.755    -122.201                  10.0600000
## 8    37.37356  -121.93283                   2.3100000
## 9   37.572638 -122.310769                   1.0900000
## 10  37.917861  -122.33838                  17.8400000
## 11   37.83429  -122.29349                  12.3600000
## 12  37.746843 -122.200699                  24.4100000
## 13    37.6952   -122.1858                   0.0645000
## 14    37.6952   -122.1858                   0.0115000
## 15    37.8236   -122.2956                   0.1778000
## 16    37.8236   -122.2956                   0.0421000
## 17    37.4527   -122.1108                   0.0030000
## 18    37.4527   -122.1108                   0.0054000
## 19    37.4332   -121.9522                   0.0186000
## 20    37.4332   -121.9522                   0.0233000
## 21    37.4193   -122.0162                   0.0222000
## 22    37.9961   -122.0686                   0.0778000
## 23    38.2233   -122.0829                   0.0037000
## 24    38.2233   -122.0829                   0.0055000
## 25    37.8236   -122.2956                   0.1083000
## 26    37.7476   -122.3728                   0.1593000
## 27    37.7476   -122.3728                   0.1816000
## 28    37.4193   -122.0162                   0.0075000
## 29    37.9961   -122.0686                   0.0683000
## 30    37.4576   -122.0921                          NA
## 31    37.4576   -122.0921                          NA
## 32    37.4576   -122.0921                          NA
## 33    37.4576   -122.0921                          NA
## 34    37.4576   -122.0921                          NA
## 35    37.4576   -122.0921                          NA
## 36    37.4576   -122.0921                          NA
## 37    37.4576   -122.0921                          NA
## 38    37.4576   -122.0921                          NA
## 39    37.4576   -122.0921                          NA
## 40    37.4576   -122.0921                          NA
## 41    37.4576   -122.0921                          NA
## 42    37.4576   -122.0921                          NA
## 43    37.4576   -122.0921                          NA
## 44    38.2093   -122.9292                          NA
## 45    38.2093   -122.9292                          NA
## 46    38.2093   -122.9292                          NA
## 47    38.2093   -122.9292                          NA
## 48    38.2093   -122.9292                          NA
## 49    38.2093   -122.9292                          NA
## 50    38.2093   -122.9292                          NA
## 51    38.2093   -122.9292                          NA
## 52    38.2093   -122.9292                          NA
## 53    38.2093   -122.9292                          NA
## 54    38.0908   -122.8358                          NA
## 55    38.0908   -122.8358                          NA
## 56    38.0908   -122.8358                          NA
## 57    38.0908   -122.8358                          NA
## 58    38.0908   -122.8358                          NA
## 59    38.0908   -122.8358                          NA
## 60    38.0908   -122.8358                          NA
## 61    38.0908   -122.8358                          NA
## 62    38.0908   -122.8358                          NA
## 63    38.0908   -122.8358                          NA
## 64    38.2093   -122.9292                          NA
## 65    38.2093   -122.9292                          NA
## 66    38.2093   -122.9292                          NA
## 67    38.2093   -122.9292                          NA
## 68    38.2093   -122.9292                          NA
## 69    38.2093   -122.9292                          NA
## 70    38.2093   -122.9292                          NA
## 71    38.2093   -122.9292                          NA
## 72    38.2093   -122.9292                          NA
## 73    38.2093   -122.9292                          NA
## 74    37.7579   -122.3055                          NA
## 75    37.7579   -122.3055                          NA
## 76    37.7579   -122.3055                          NA
## 77    37.7579   -122.3055                          NA
## 78    37.7579   -122.3055                          NA
## 79    37.7579   -122.3055                          NA
## 80    37.7579   -122.3055                          NA
## 81    37.7579   -122.3055                          NA
## 82    37.7579   -122.3055                          NA
## 83    37.7579   -122.3055                          NA
## 84    37.7579   -122.3055                          NA
## 85    37.7579   -122.3055                          NA
## 86    37.7579   -122.3055                          NA
## 87    37.7579   -122.3055                          NA
## 88    37.7579   -122.3055                          NA
## 89    37.7579   -122.3055                          NA
## 90    37.7579   -122.3055                          NA
## 91    37.7579   -122.3055                          NA
## 92    37.7579   -122.3055                          NA
## 93    37.7579   -122.3055                          NA
## 94    37.9067   -122.3467                          NA
## 95    37.9067   -122.3467                          NA
## 96    37.9067   -122.3467                          NA
## 97    37.9067   -122.3467                          NA
## 98    37.9067   -122.3467                          NA
## 99    37.9067   -122.3467                          NA
## 100   37.9067   -122.3467                          NA
## 101   37.9067   -122.3467                          NA
## 102   37.9067   -122.3467                          NA
## 103   37.9067   -122.3467                          NA
## 104   37.9067   -122.3467                          NA
## 105   37.9067   -122.3467                          NA
## 106   37.9067   -122.3467                          NA
## 107   37.9067   -122.3467                          NA
## 108   37.9067   -122.3467                          NA
## 109   37.9067   -122.3467                          NA
## 110   37.9067   -122.3467                          NA
## 111   37.9067   -122.3467                          NA
## 112   37.4621   -122.0217                          NA
## 113   37.4621   -122.0217                          NA
## 114   37.4621   -122.0217                          NA
## 115   37.4621   -122.0217                          NA
## 116   37.4621   -122.0217                          NA
## 117   37.4621   -122.0217                          NA
## 118   37.4621   -122.0217                          NA
## 119   37.4621   -122.0217                          NA
## 120   37.4621   -122.0217                          NA
## 121   37.4621   -122.0217                          NA
## 122   37.5277    -122.184                          NA
## 123   37.5277    -122.184                          NA
## 124   37.5277    -122.184                          NA
## 125   37.5277    -122.184                          NA
## 126   37.5277    -122.184                          NA
## 127   37.5277    -122.184                          NA
## 128   37.5277    -122.184                          NA
## 129   37.5277    -122.184                          NA
## 130   37.5277    -122.184                          NA
## 131   37.5277    -122.184                          NA
## 132   37.5277    -122.184                          NA
## 133   37.5277    -122.184                          NA
## 134   37.5277    -122.184                          NA
## 135   37.5277    -122.184                          NA
## 136   37.5277    -122.184                          NA
## 137   37.5277    -122.184                          NA
## 138   37.5277    -122.184                          NA
## 139   37.5277    -122.184                          NA
## 140   37.5277    -122.184                          NA
## 141   37.5277    -122.184                          NA
## 142   37.6414   -122.3945                          NA
## 143   37.6414   -122.3945                          NA
## 144   37.6414   -122.3945                          NA
## 145   37.6414   -122.3945                          NA
## 146   37.6414   -122.3945                          NA
## 147   37.6414   -122.3945                          NA
## 148   37.6414   -122.3945                          NA
## 149   37.6414   -122.3945                          NA
## 150   37.6414   -122.3945                          NA
## 151   37.6414   -122.3945                          NA
## 152   37.6414   -122.3945                          NA
## 153   37.6414   -122.3945                          NA
## 154   37.6414   -122.3945                          NA
## 155   37.6414   -122.3945                          NA
## 156   37.6414   -122.3945                          NA
## 157   37.6414   -122.3945                          NA
## 158   37.6414   -122.3945                          NA
## 159   37.6414   -122.3945                          NA
## 160   37.6414   -122.3945                          NA
## 161   37.6414   -122.3945                          NA
## 162   37.4621   -122.0217                          NA
## 163   37.4621   -122.0217                          NA
## 164   37.4621   -122.0217                          NA
## 165   37.4621   -122.0217                          NA
## 166   37.4621   -122.0217                          NA
## 167   37.4621   -122.0217                          NA
## 168   37.4621   -122.0217                          NA
## 169   37.4621   -122.0217                          NA
## 170   37.4621   -122.0217                          NA
## 171   37.4621   -122.0217                          NA
## 172   38.0908   -122.8358                          NA
## 173   38.0908   -122.8358                          NA
## 174   38.0908   -122.8358                          NA
## 175   38.0908   -122.8358                          NA
## 176   38.0908   -122.8358                          NA
## 177   38.0908   -122.8358                          NA
## 178   38.0908   -122.8358                          NA
## 179   38.0908   -122.8358                          NA
## 180   38.0908   -122.8358                          NA
## 181   38.0908   -122.8358                          NA
## 182   37.8766   -122.3615                          NA
## 183   37.9067   -122.3467                          NA
## 184   37.8279   -122.3034                          NA
## 185   37.7566   -122.2204                          NA
## 186   37.6414   -122.3945                          NA
## 187   37.4628    -122.105                          NA
## 188   37.4864    -122.069                          NA
## 189   37.4576    -122.092                          NA
## 190   37.6104    -122.167                          NA
## 191   37.6018    -122.362                          NA
## 192   37.5605    -122.131                          NA
## 193   37.5277    -122.184                          NA
## 194   37.4576     -122.04                          NA
## 195   37.4621    -122.022                          NA
## 196   38.0157   -122.3002                          NA
## 197   38.1084   -122.4881                          NA
## 198   38.1362    -122.035                          NA
## 199   38.0441   -122.0969                          NA
## 200   38.2093   -122.9292                          NA
## 201   38.0908   -122.8358                          NA
## 202     37.92     -122.44                   0.0000230
## 203     37.92     -122.43                   0.0061140
## 204     37.84     -122.42                   0.0004390
## 205     37.85     -122.41                   0.0018880
## 206     37.85     -122.41                   0.0005110
## 207     37.83     -122.32                   0.0000830
## 208     37.83     -122.32                   0.0004640
## 209       N/A         N/A                   0.0007740
## 210     37.78     -122.35                   0.0007290
## 211     37.75     -122.23                   0.0022650
## 212     37.75     -122.23                   0.0043430
## 213     37.69     -122.29                   0.0001880
## 214     37.69      -122.3                   0.0555910
## 215      38.1     -123.11                   0.0000880
## 216     38.11     -123.11                   0.0001630
## 217     38.02     -123.33                   0.0001260
## 218     38.03     -123.31                   0.0001390
## 219     37.99      -123.5                   0.0000000
## 220       N/A         N/A                   0.0000230
## 221     37.97     -122.93                   0.0002180
## 222     37.97     -122.93                   0.0000200
## 223     37.82     -123.02                   0.0000790
## 224     37.82     -123.01                   0.0001390
## 225     37.75     -123.26                   0.0000780
## 226     37.73     -123.26                   0.0000050
## 227     37.81     -122.76                   0.0000960
## 228     37.81     -122.76                   0.0000560
## 229     37.47     -122.06                   0.0009820
## 230     37.48     -122.08                   0.0002660
## 231     37.46     -122.08                   0.0003570
## 232     37.47     -122.09                   0.0002480
## 233     37.46     -122.03                   0.0001530
## 234     37.45     -122.03                   0.0005160
## 235     37.81     -122.47                   0.0003960
## 236     37.79      -122.5                   0.0002940
## 237      37.8      -122.5                   0.0002730
## 238     37.81     -122.51                   0.0000190
## 239     37.67     -122.61                   0.0000380
## 240     37.67     -122.61                   0.0000680
## 241     37.51     -122.57                   0.0000540
## 242     37.51     -122.58                   0.0000380
## 243     37.44     -122.93                   0.0000680
## 244     37.45     -122.93                   0.0000240
## 245     37.65     -122.24                   0.0001120
## 246     37.65     -122.23                   0.0002360
## 247      37.6     -122.25                   0.0001810
## 248     37.59      -122.2                   0.0026050
## 249     37.59     -122.28                   0.0001280
## 250     37.58     -122.27                   0.0004880
## 251     37.57     -122.21                   0.0028990
## 252     37.56     -122.22                   0.0013840
## 253     37.82     -122.36                   0.0004260
## 254     38.05     -122.42                   0.0000590
## 255     38.06     -122.42                   0.0000920
## 256     38.64     -122.37                   0.0006370
## 257     38.02     -122.37                   0.0014090
## 258     38.11     -122.06                   0.0000810
## 259     38.11     -122.06                   0.0001310
## 260  37.9156   -122.4412                    3.4653465
## 261  37.9229   -122.4330                    2.7348777
## 262  37.8430   -122.4150                    7.4331021
## 263  37.8445   -122.4069                    0.6277464
## 264  37.8342   -122.3204                    1.9509595
## 265  37.8339   -122.3221                    4.9844237
## 266      N/A         N/A                    2.3251073
## 267  37.7795   -122.3537                    1.5827794
## 268  37.7514   -122.2260                    2.7035623
## 269  37.7505   -122.2278                    2.5510204
## 270  37.6872   -122.2909                    6.5789474
## 271  37.6936   -122.2991                   18.7110187
## 272  38.1068   -123.1138                    3.0000000
## 273  38.0346   -123.3131                    1.6404199
## 274  37.9853   -123.4973                    8.6715227
## 275  37.8128   -122.4723                    0.6523157
## 276  37.9670   -122.9272                    0.0000000
## 277  37.9695   -122.9270                    1.8115942
## 278  37.8213   -123.0068                    0.7095745
## 279  37.7327   -123.2630                    1.2626263
## 280  37.8058   -122.7561                    3.6647546
## 281  37.4801   -122.0781                    3.0984997
## 282  37.4654   -122.0912                    1.2795905
## 283  37.4528   -122.0331                    7.6190476
## 284  37.4645   -122.0271                    2.4122807
## 285  37.8208   -123.0177                   13.5732323
## 286  37.8064   -122.7583                    2.3832221
## 287  37.8053   -122.5082                    0.9433962
## 288  37.7985   -122.5049                   35.7031494
## 289  37.7935   -122.5030                    2.2525988
## 290  37.6726   -122.6108                    2.2022684
## 291  37.6718   -122.6110                    1.6056519
## 292  37.5070   -122.5804                    4.2694497
## 293      N/A         N/A                    3.5020694
## 294  37.4504   -122.9320                   18.7659033
## 295  37.4446   -122.9280                    6.2984496
## 296  37.6534   -122.2281                    0.9980040
## 297  37.6500   -122.2433                    6.1443932
## 298  37.5863   -122.2022                    3.3460803
## 299  37.5983   -122.2502                    1.5957447
## 300  37.5829   -122.2708                    2.6666667
## 301  37.5649   -122.2227                    4.3383948
## 302  37.5701   -122.2129                    9.9313832
## 303  38.0513   -122.4218                    3.3333333
## 304  38.0598   -122.4244                    2.8333333
## 305  38.6405   -122.3716                    5.0860720
## 306  38.0239   -122.3682                    5.2430887
## 307  38.1071   -122.0563                    2.7646130
## 308  38.1079   -122.0570                    4.4275775
##     particles.fish.blank.corrected particles.kg.blank.corrected sample.matrix
## 1                               NA                           NA         water
## 2                               NA                           NA         water
## 3                               NA                           NA         water
## 4                               NA                           NA         water
## 5                               NA                           NA         water
## 6                               NA                           NA         water
## 7                               NA                           NA         water
## 8                               NA                           NA         water
## 9                               NA                           NA         water
## 10                              NA                           NA         water
## 11                              NA                           NA         water
## 12                              NA                           NA         water
## 13                              NA                           NA         water
## 14                              NA                           NA         water
## 15                              NA                           NA         water
## 16                              NA                           NA         water
## 17                              NA                           NA         water
## 18                              NA                           NA         water
## 19                              NA                           NA         water
## 20                              NA                           NA         water
## 21                              NA                           NA         water
## 22                              NA                           NA         water
## 23                              NA                           NA         water
## 24                              NA                           NA         water
## 25                              NA                           NA         water
## 26                              NA                           NA         water
## 27                              NA                           NA         water
## 28                              NA                           NA         water
## 29                              NA                           NA         water
## 30                           24.27                           NA          fish
## 31                            6.60                           NA          fish
## 32                            0.87                           NA          fish
## 33                            1.00                           NA          fish
## 34                            0.93                           NA          fish
## 35                            3.53                           NA          fish
## 36                            2.40                           NA          fish
## 37                           45.07                           NA          fish
## 38                            8.00                           NA          fish
## 39                           11.67                           NA          fish
## 40                            5.73                           NA          fish
## 41                            5.87                           NA          fish
## 42                           14.47                           NA          fish
## 43                            1.80                           NA          fish
## 44                            0.00                           NA          fish
## 45                            0.00                           NA          fish
## 46                            1.73                           NA          fish
## 47                            0.13                           NA          fish
## 48                            1.80                           NA          fish
## 49                            1.00                           NA          fish
## 50                            5.47                           NA          fish
## 51                            3.87                           NA          fish
## 52                            7.40                           NA          fish
## 53                            6.00                           NA          fish
## 54                            5.47                           NA          fish
## 55                            3.60                           NA          fish
## 56                            0.00                           NA          fish
## 57                            2.00                           NA          fish
## 58                            2.67                           NA          fish
## 59                            1.60                           NA          fish
## 60                            1.13                           NA          fish
## 61                            1.60                           NA          fish
## 62                            1.60                           NA          fish
## 63                            0.87                           NA          fish
## 64                            6.33                           NA          fish
## 65                            0.13                           NA          fish
## 66                           15.40                           NA          fish
## 67                           11.27                           NA          fish
## 68                           11.40                           NA          fish
## 69                            3.27                           NA          fish
## 70                           11.33                           NA          fish
## 71                            1.87                           NA          fish
## 72                            2.40                           NA          fish
## 73                            1.00                           NA          fish
## 74                           11.13                           NA          fish
## 75                            9.07                           NA          fish
## 76                            3.93                           NA          fish
## 77                            8.87                           NA          fish
## 78                            9.40                           NA          fish
## 79                            3.40                           NA          fish
## 80                            9.00                           NA          fish
## 81                           16.40                           NA          fish
## 82                            6.60                           NA          fish
## 83                            1.80                           NA          fish
## 84                           17.53                           NA          fish
## 85                           17.27                           NA          fish
## 86                           11.07                           NA          fish
## 87                           24.00                           NA          fish
## 88                           20.33                           NA          fish
## 89                           14.53                           NA          fish
## 90                           17.73                           NA          fish
## 91                            9.53                           NA          fish
## 92                           13.47                           NA          fish
## 93                           14.60                           NA          fish
## 94                           35.13                           NA          fish
## 95                           20.40                           NA          fish
## 96                           28.13                           NA          fish
## 97                           13.13                           NA          fish
## 98                           13.13                           NA          fish
## 99                            5.73                           NA          fish
## 100                          14.40                           NA          fish
## 101                          15.07                           NA          fish
## 102                          21.93                           NA          fish
## 103                           7.40                           NA          fish
## 104                          21.60                           NA          fish
## 105                          35.40                           NA          fish
## 106                          22.53                           NA          fish
## 107                           6.67                           NA          fish
## 108                          12.33                           NA          fish
## 109                          18.87                           NA          fish
## 110                           8.40                           NA          fish
## 111                           3.40                           NA          fish
## 112                           9.00                           NA          fish
## 113                           0.73                           NA          fish
## 114                           2.47                           NA          fish
## 115                           7.27                           NA          fish
## 116                           2.40                           NA          fish
## 117                           1.67                           NA          fish
## 118                           2.73                           NA          fish
## 119                           5.40                           NA          fish
## 120                           0.73                           NA          fish
## 121                           1.67                           NA          fish
## 122                           3.60                           NA          fish
## 123                           1.73                           NA          fish
## 124                           1.00                           NA          fish
## 125                           1.67                           NA          fish
## 126                          12.87                           NA          fish
## 127                           4.53                           NA          fish
## 128                           3.40                           NA          fish
## 129                           3.73                           NA          fish
## 130                           1.87                           NA          fish
## 131                           4.73                           NA          fish
## 132                          10.13                           NA          fish
## 133                          27.13                           NA          fish
## 134                          31.20                           NA          fish
## 135                          35.13                           NA          fish
## 136                          27.00                           NA          fish
## 137                          24.00                           NA          fish
## 138                          56.13                           NA          fish
## 139                          16.27                           NA          fish
## 140                          21.13                           NA          fish
## 141                          28.13                           NA          fish
## 142                          22.27                           NA          fish
## 143                           9.27                           NA          fish
## 144                          24.07                           NA          fish
## 145                           7.40                           NA          fish
## 146                          12.27                           NA          fish
## 147                           7.13                           NA          fish
## 148                           7.53                           NA          fish
## 149                           7.87                           NA          fish
## 150                           2.13                           NA          fish
## 151                           1.93                           NA          fish
## 152                           7.87                           NA          fish
## 153                           1.53                           NA          fish
## 154                           2.80                           NA          fish
## 155                           8.40                           NA          fish
## 156                          12.40                           NA          fish
## 157                           3.87                           NA          fish
## 158                           8.87                           NA          fish
## 159                           6.47                           NA          fish
## 160                           4.53                           NA          fish
## 161                           2.87                           NA          fish
## 162                          32.93                           NA          fish
## 163                          15.60                           NA          fish
## 164                          44.13                           NA          fish
## 165                          17.47                           NA          fish
## 166                           4.00                           NA          fish
## 167                           6.53                           NA          fish
## 168                           8.80                           NA          fish
## 169                          10.27                           NA          fish
## 170                           7.80                           NA          fish
## 171                           0.80                           NA          fish
## 172                          20.47                           NA          fish
## 173                          13.33                           NA          fish
## 174                           4.27                           NA          fish
## 175                           2.60                           NA          fish
## 176                           6.40                           NA          fish
## 177                           6.47                           NA          fish
## 178                           1.00                           NA          fish
## 179                           3.73                           NA          fish
## 180                           2.27                           NA          fish
## 181                           5.60                           NA          fish
## 182                             NA                       425.56      sediment
## 183                             NA                      1140.55      sediment
## 184                             NA                      1610.94      sediment
## 185                             NA                     12095.68      sediment
## 186                             NA                      2730.69      sediment
## 187                             NA                     42104.17      sediment
## 188                             NA                      3647.26      sediment
## 189                             NA                      7108.70      sediment
## 190                             NA                      2893.81      sediment
## 191                             NA                       835.84      sediment
## 192                             NA                        26.67      sediment
## 193                             NA                       313.33      sediment
## 194                             NA                      9270.83      sediment
## 195                             NA                      7045.45      sediment
## 196                             NA                       567.78      sediment
## 197                             NA                      1028.07      sediment
## 198                             NA                       250.00      sediment
## 199                             NA                       131.02      sediment
## 200                             NA                       100.07      sediment
## 201                             NA                       216.38      sediment
## 202                             NA                           NA         water
## 203                             NA                           NA         water
## 204                             NA                           NA         water
## 205                             NA                           NA         water
## 206                             NA                           NA         water
## 207                             NA                           NA         water
## 208                             NA                           NA         water
## 209                             NA                           NA         water
## 210                             NA                           NA         water
## 211                             NA                           NA         water
## 212                             NA                           NA         water
## 213                             NA                           NA         water
## 214                             NA                           NA         water
## 215                             NA                           NA         water
## 216                             NA                           NA         water
## 217                             NA                           NA         water
## 218                             NA                           NA         water
## 219                             NA                           NA         water
## 220                             NA                           NA         water
## 221                             NA                           NA         water
## 222                             NA                           NA         water
## 223                             NA                           NA         water
## 224                             NA                           NA         water
## 225                             NA                           NA         water
## 226                             NA                           NA         water
## 227                             NA                           NA         water
## 228                             NA                           NA         water
## 229                             NA                           NA         water
## 230                             NA                           NA         water
## 231                             NA                           NA         water
## 232                             NA                           NA         water
## 233                             NA                           NA         water
## 234                             NA                           NA         water
## 235                             NA                           NA         water
## 236                             NA                           NA         water
## 237                             NA                           NA         water
## 238                             NA                           NA         water
## 239                             NA                           NA         water
## 240                             NA                           NA         water
## 241                             NA                           NA         water
## 242                             NA                           NA         water
## 243                             NA                           NA         water
## 244                             NA                           NA         water
## 245                             NA                           NA         water
## 246                             NA                           NA         water
## 247                             NA                           NA         water
## 248                             NA                           NA         water
## 249                             NA                           NA         water
## 250                             NA                           NA         water
## 251                             NA                           NA         water
## 252                             NA                           NA         water
## 253                             NA                           NA         water
## 254                             NA                           NA         water
## 255                             NA                           NA         water
## 256                             NA                           NA         water
## 257                             NA                           NA         water
## 258                             NA                           NA         water
## 259                             NA                           NA         water
## 260                             NA                           NA         water
## 261                             NA                           NA         water
## 262                             NA                           NA         water
## 263                             NA                           NA         water
## 264                             NA                           NA         water
## 265                             NA                           NA         water
## 266                             NA                           NA         water
## 267                             NA                           NA         water
## 268                             NA                           NA         water
## 269                             NA                           NA         water
## 270                             NA                           NA         water
## 271                             NA                           NA         water
## 272                             NA                           NA         water
## 273                             NA                           NA         water
## 274                             NA                           NA         water
## 275                             NA                           NA         water
## 276                             NA                           NA         water
## 277                             NA                           NA         water
## 278                             NA                           NA         water
## 279                             NA                           NA         water
## 280                             NA                           NA         water
## 281                             NA                           NA         water
## 282                             NA                           NA         water
## 283                             NA                           NA         water
## 284                             NA                           NA         water
## 285                             NA                           NA         water
## 286                             NA                           NA         water
## 287                             NA                           NA         water
## 288                             NA                           NA         water
## 289                             NA                           NA         water
## 290                             NA                           NA         water
## 291                             NA                           NA         water
## 292                             NA                           NA         water
## 293                             NA                           NA         water
## 294                             NA                           NA         water
## 295                             NA                           NA         water
## 296                             NA                           NA         water
## 297                             NA                           NA         water
## 298                             NA                           NA         water
## 299                             NA                           NA         water
## 300                             NA                           NA         water
## 301                             NA                           NA         water
## 302                             NA                           NA         water
## 303                             NA                           NA         water
## 304                             NA                           NA         water
## 305                             NA                           NA         water
## 306                             NA                           NA         water
## 307                             NA                           NA         water
## 308                             NA                           NA         water
##     sample.matrix.specific               Sampling.apparatus x1M  x2M
## 1               stormwater depth-integrated perisaltic pump 106 5000
## 2               stormwater depth-integrated perisaltic pump 106 5000
## 3               stormwater depth-integrated perisaltic pump 106 5000
## 4               stormwater depth-integrated perisaltic pump 106 5000
## 5               stormwater depth-integrated perisaltic pump 106 5000
## 6               stormwater depth-integrated perisaltic pump 106 5000
## 7               stormwater depth-integrated perisaltic pump 106 5000
## 8               stormwater depth-integrated perisaltic pump 106 5000
## 9               stormwater depth-integrated perisaltic pump 106 5000
## 10              stormwater depth-integrated perisaltic pump 106 5000
## 11              stormwater depth-integrated perisaltic pump 106 5000
## 12              stormwater depth-integrated perisaltic pump 106 5000
## 13              wastewater                        Composite 110 5000
## 14              wastewater                        Composite 110 5000
## 15              wastewater                        Composite 110 5000
## 16              wastewater                        Composite 110 5000
## 17              wastewater                        Composite 110 5000
## 18              wastewater                        Composite 110 5000
## 19              wastewater                        Composite 110 5000
## 20              wastewater                        Composite 110 5000
## 21              wastewater                        Composite 110 5000
## 22              wastewater                        Composite 110 5000
## 23              wastewater                        Composite 110 5000
## 24              wastewater                        Composite 110 5000
## 25              wastewater                        Composite 110 5000
## 26              wastewater                        Composite 110 5000
## 27              wastewater                        Composite 110 5000
## 28              wastewater                        Composite 110 5000
## 29              wastewater                        Composite 110 5000
## 30                 anchovy             otter trawl/cast net  25 5000
## 31                 anchovy             otter trawl/cast net  25 5000
## 32                 anchovy             otter trawl/cast net  25 5000
## 33                topsmelt             otter trawl/cast net  25 5000
## 34                topsmelt             otter trawl/cast net  25 5000
## 35                topsmelt             otter trawl/cast net  25 5000
## 36                topsmelt             otter trawl/cast net  25 5000
## 37                 anchovy             otter trawl/cast net  25 5000
## 38                topsmelt             otter trawl/cast net  25 5000
## 39                topsmelt             otter trawl/cast net  25 5000
## 40                topsmelt             otter trawl/cast net  25 5000
## 41                topsmelt             otter trawl/cast net  25 5000
## 42                topsmelt             otter trawl/cast net  25 5000
## 43                topsmelt             otter trawl/cast net  25 5000
## 44                 anchovy             otter trawl/cast net  25 5000
## 45                 anchovy             otter trawl/cast net  25 5000
## 46                 anchovy             otter trawl/cast net  25 5000
## 47                 anchovy             otter trawl/cast net  25 5000
## 48                 anchovy             otter trawl/cast net  25 5000
## 49                 anchovy             otter trawl/cast net  25 5000
## 50                 anchovy             otter trawl/cast net  25 5000
## 51                 anchovy             otter trawl/cast net  25 5000
## 52                 anchovy             otter trawl/cast net  25 5000
## 53                 anchovy             otter trawl/cast net  25 5000
## 54                 anchovy             otter trawl/cast net  25 5000
## 55                 anchovy             otter trawl/cast net  25 5000
## 56                 anchovy             otter trawl/cast net  25 5000
## 57                 anchovy             otter trawl/cast net  25 5000
## 58                 anchovy             otter trawl/cast net  25 5000
## 59                 anchovy             otter trawl/cast net  25 5000
## 60                 anchovy             otter trawl/cast net  25 5000
## 61                 anchovy             otter trawl/cast net  25 5000
## 62                 anchovy             otter trawl/cast net  25 5000
## 63                 anchovy             otter trawl/cast net  25 5000
## 64                topsmelt             otter trawl/cast net  25 5000
## 65                topsmelt             otter trawl/cast net  25 5000
## 66                topsmelt             otter trawl/cast net  25 5000
## 67                topsmelt             otter trawl/cast net  25 5000
## 68                topsmelt             otter trawl/cast net  25 5000
## 69                topsmelt             otter trawl/cast net  25 5000
## 70                topsmelt             otter trawl/cast net  25 5000
## 71                topsmelt             otter trawl/cast net  25 5000
## 72                topsmelt             otter trawl/cast net  25 5000
## 73                topsmelt             otter trawl/cast net  25 5000
## 74                topsmelt             otter trawl/cast net  25 5000
## 75                topsmelt             otter trawl/cast net  25 5000
## 76                topsmelt             otter trawl/cast net  25 5000
## 77                topsmelt             otter trawl/cast net  25 5000
## 78                topsmelt             otter trawl/cast net  25 5000
## 79                topsmelt             otter trawl/cast net  25 5000
## 80                topsmelt             otter trawl/cast net  25 5000
## 81                topsmelt             otter trawl/cast net  25 5000
## 82                topsmelt             otter trawl/cast net  25 5000
## 83                topsmelt             otter trawl/cast net  25 5000
## 84                 anchovy             otter trawl/cast net  25 5000
## 85                 anchovy             otter trawl/cast net  25 5000
## 86                 anchovy             otter trawl/cast net  25 5000
## 87                 anchovy             otter trawl/cast net  25 5000
## 88                 anchovy             otter trawl/cast net  25 5000
## 89                 anchovy             otter trawl/cast net  25 5000
## 90                 anchovy             otter trawl/cast net  25 5000
## 91                 anchovy             otter trawl/cast net  25 5000
## 92                 anchovy             otter trawl/cast net  25 5000
## 93                 anchovy             otter trawl/cast net  25 5000
## 94                 anchovy             otter trawl/cast net  25 5000
## 95                 anchovy             otter trawl/cast net  25 5000
## 96                 anchovy             otter trawl/cast net  25 5000
## 97                 anchovy             otter trawl/cast net  25 5000
## 98                 anchovy             otter trawl/cast net  25 5000
## 99                 anchovy             otter trawl/cast net  25 5000
## 100                anchovy             otter trawl/cast net  25 5000
## 101                anchovy             otter trawl/cast net  25 5000
## 102                anchovy             otter trawl/cast net  25 5000
## 103                anchovy             otter trawl/cast net  25 5000
## 104               topsmelt             otter trawl/cast net  25 5000
## 105               topsmelt             otter trawl/cast net  25 5000
## 106               topsmelt             otter trawl/cast net  25 5000
## 107               topsmelt             otter trawl/cast net  25 5000
## 108               topsmelt             otter trawl/cast net  25 5000
## 109               topsmelt             otter trawl/cast net  25 5000
## 110               topsmelt             otter trawl/cast net  25 5000
## 111               topsmelt             otter trawl/cast net  25 5000
## 112                anchovy             otter trawl/cast net  25 5000
## 113                anchovy             otter trawl/cast net  25 5000
## 114                anchovy             otter trawl/cast net  25 5000
## 115                anchovy             otter trawl/cast net  25 5000
## 116                anchovy             otter trawl/cast net  25 5000
## 117                anchovy             otter trawl/cast net  25 5000
## 118                anchovy             otter trawl/cast net  25 5000
## 119                anchovy             otter trawl/cast net  25 5000
## 120                anchovy             otter trawl/cast net  25 5000
## 121                anchovy             otter trawl/cast net  25 5000
## 122                anchovy             otter trawl/cast net  25 5000
## 123                anchovy             otter trawl/cast net  25 5000
## 124                anchovy             otter trawl/cast net  25 5000
## 125                anchovy             otter trawl/cast net  25 5000
## 126                anchovy             otter trawl/cast net  25 5000
## 127                anchovy             otter trawl/cast net  25 5000
## 128                anchovy             otter trawl/cast net  25 5000
## 129                anchovy             otter trawl/cast net  25 5000
## 130                anchovy             otter trawl/cast net  25 5000
## 131                anchovy             otter trawl/cast net  25 5000
## 132               topsmelt             otter trawl/cast net  25 5000
## 133               topsmelt             otter trawl/cast net  25 5000
## 134               topsmelt             otter trawl/cast net  25 5000
## 135               topsmelt             otter trawl/cast net  25 5000
## 136               topsmelt             otter trawl/cast net  25 5000
## 137               topsmelt             otter trawl/cast net  25 5000
## 138               topsmelt             otter trawl/cast net  25 5000
## 139               topsmelt             otter trawl/cast net  25 5000
## 140               topsmelt             otter trawl/cast net  25 5000
## 141               topsmelt             otter trawl/cast net  25 5000
## 142                anchovy             otter trawl/cast net  25 5000
## 143                anchovy             otter trawl/cast net  25 5000
## 144                anchovy             otter trawl/cast net  25 5000
## 145                anchovy             otter trawl/cast net  25 5000
## 146                anchovy             otter trawl/cast net  25 5000
## 147                anchovy             otter trawl/cast net  25 5000
## 148                anchovy             otter trawl/cast net  25 5000
## 149                anchovy             otter trawl/cast net  25 5000
## 150                anchovy             otter trawl/cast net  25 5000
## 151                anchovy             otter trawl/cast net  25 5000
## 152               topsmelt             otter trawl/cast net  25 5000
## 153               topsmelt             otter trawl/cast net  25 5000
## 154               topsmelt             otter trawl/cast net  25 5000
## 155               topsmelt             otter trawl/cast net  25 5000
## 156               topsmelt             otter trawl/cast net  25 5000
## 157               topsmelt             otter trawl/cast net  25 5000
## 158               topsmelt             otter trawl/cast net  25 5000
## 159               topsmelt             otter trawl/cast net  25 5000
## 160               topsmelt             otter trawl/cast net  25 5000
## 161               topsmelt             otter trawl/cast net  25 5000
## 162               topsmelt             otter trawl/cast net  25 5000
## 163               topsmelt             otter trawl/cast net  25 5000
## 164               topsmelt             otter trawl/cast net  25 5000
## 165               topsmelt             otter trawl/cast net  25 5000
## 166               topsmelt             otter trawl/cast net  25 5000
## 167               topsmelt             otter trawl/cast net  25 5000
## 168               topsmelt             otter trawl/cast net  25 5000
## 169               topsmelt             otter trawl/cast net  25 5000
## 170               topsmelt             otter trawl/cast net  25 5000
## 171               topsmelt             otter trawl/cast net  25 5000
## 172               topsmelt             otter trawl/cast net  25 5000
## 173               topsmelt             otter trawl/cast net  25 5000
## 174               topsmelt             otter trawl/cast net  25 5000
## 175               topsmelt             otter trawl/cast net  25 5000
## 176               topsmelt             otter trawl/cast net  25 5000
## 177               topsmelt             otter trawl/cast net  25 5000
## 178               topsmelt             otter trawl/cast net  25 5000
## 179               topsmelt             otter trawl/cast net  25 5000
## 180               topsmelt             otter trawl/cast net  25 5000
## 181               topsmelt             otter trawl/cast net  25 5000
## 182               sediment                    Van Veen Grab  45 5000
## 183               sediment                    Van Veen Grab  45 5000
## 184               sediment                    Van Veen Grab  45 5000
## 185               sediment                    Van Veen Grab  45 5000
## 186               sediment                    Van Veen Grab  45 5000
## 187               sediment                    Van Veen Grab  45 5000
## 188               sediment                    Van Veen Grab  45 5000
## 189               sediment                    Van Veen Grab  45 5000
## 190               sediment                    Van Veen Grab  45 5000
## 191               sediment                    Van Veen Grab  45 5000
## 192               sediment                    Van Veen Grab  45 5000
## 193               sediment                    Van Veen Grab  45 5000
## 194               sediment                    Van Veen Grab  45 5000
## 195               sediment                    Van Veen Grab  45 5000
## 196               sediment                    Van Veen Grab  45 5000
## 197               sediment                    Van Veen Grab  45 5000
## 198               sediment                    Van Veen Grab  45 5000
## 199               sediment                    Van Veen Grab  45 5000
## 200               sediment                    Van Veen Grab  45 5000
## 201               sediment                    Van Veen Grab  45 5000
## 202          surface water                      Manta Trawl 333 5000
## 203          surface water                      Manta Trawl 333 5000
## 204          surface water                      Manta Trawl 333 5000
## 205          surface water                      Manta Trawl 333 5000
## 206          surface water                      Manta Trawl 333 5000
## 207          surface water                      Manta Trawl 333 5000
## 208          surface water                      Manta Trawl 333 5000
## 209          surface water                      Manta Trawl 333 5000
## 210          surface water                      Manta Trawl 333 5000
## 211          surface water                      Manta Trawl 333 5000
## 212          surface water                      Manta Trawl 333 5000
## 213          surface water                      Manta Trawl 333 5000
## 214          surface water                      Manta Trawl 333 5000
## 215          surface water                      Manta Trawl 333 5000
## 216          surface water                      Manta Trawl 333 5000
## 217          surface water                      Manta Trawl 333 5000
## 218          surface water                      Manta Trawl 333 5000
## 219          surface water                      Manta Trawl 333 5000
## 220          surface water                      Manta Trawl 333 5000
## 221          surface water                      Manta Trawl 333 5000
## 222          surface water                      Manta Trawl 333 5000
## 223          surface water                      Manta Trawl 333 5000
## 224          surface water                      Manta Trawl 333 5000
## 225          surface water                      Manta Trawl 333 5000
## 226          surface water                      Manta Trawl 333 5000
## 227          surface water                      Manta Trawl 333 5000
## 228          surface water                      Manta Trawl 333 5000
## 229          surface water                      Manta Trawl 333 5000
## 230          surface water                      Manta Trawl 333 5000
## 231          surface water                      Manta Trawl 333 5000
## 232          surface water                      Manta Trawl 333 5000
## 233          surface water                      Manta Trawl 333 5000
## 234          surface water                      Manta Trawl 333 5000
## 235          surface water                      Manta Trawl 333 5000
## 236          surface water                      Manta Trawl 333 5000
## 237          surface water                      Manta Trawl 333 5000
## 238          surface water                      Manta Trawl 333 5000
## 239          surface water                      Manta Trawl 333 5000
## 240          surface water                      Manta Trawl 333 5000
## 241          surface water                      Manta Trawl 333 5000
## 242          surface water                      Manta Trawl 333 5000
## 243          surface water                      Manta Trawl 333 5000
## 244          surface water                      Manta Trawl 333 5000
## 245          surface water                      Manta Trawl 333 5000
## 246          surface water                      Manta Trawl 333 5000
## 247          surface water                      Manta Trawl 333 5000
## 248          surface water                      Manta Trawl 333 5000
## 249          surface water                      Manta Trawl 333 5000
## 250          surface water                      Manta Trawl 333 5000
## 251          surface water                      Manta Trawl 333 5000
## 252          surface water                      Manta Trawl 333 5000
## 253          surface water                      Manta Trawl 333 5000
## 254          surface water                      Manta Trawl 333 5000
## 255          surface water                      Manta Trawl 333 5000
## 256          surface water                      Manta Trawl 333 5000
## 257          surface water                      Manta Trawl 333 5000
## 258          surface water                      Manta Trawl 333 5000
## 259          surface water                      Manta Trawl 333 5000
## 260          surface water                         1-L grab  50 5000
## 261          surface water                         1-L grab  50 5000
## 262          surface water                         1-L grab  50 5000
## 263          surface water                         1-L grab  50 5000
## 264          surface water                         1-L grab  50 5000
## 265          surface water                         1-L grab  50 5000
## 266          surface water                         1-L grab  50 5000
## 267          surface water                         1-L grab  50 5000
## 268          surface water                         1-L grab  50 5000
## 269          surface water                         1-L grab  50 5000
## 270          surface water                         1-L grab  50 5000
## 271          surface water                         1-L grab  50 5000
## 272          surface water                         1-L grab  50 5000
## 273          surface water                         1-L grab  50 5000
## 274          surface water                         1-L grab  50 5000
## 275          surface water                         1-L grab  50 5000
## 276          surface water                         1-L grab  50 5000
## 277          surface water                         1-L grab  50 5000
## 278          surface water                         1-L grab  50 5000
## 279          surface water                         1-L grab  50 5000
## 280          surface water                         1-L grab  50 5000
## 281          surface water                         1-L grab  50 5000
## 282          surface water                         1-L grab  50 5000
## 283          surface water                         1-L grab  50 5000
## 284          surface water                         1-L grab  50 5000
## 285          surface water                         1-L grab  50 5000
## 286          surface water                         1-L grab  50 5000
## 287          surface water                         1-L grab  50 5000
## 288          surface water                         1-L grab  50 5000
## 289          surface water                         1-L grab  50 5000
## 290          surface water                         1-L grab  50 5000
## 291          surface water                         1-L grab  50 5000
## 292          surface water                         1-L grab  50 5000
## 293          surface water                         1-L grab  50 5000
## 294          surface water                         1-L grab  50 5000
## 295          surface water                         1-L grab  50 5000
## 296          surface water                         1-L grab  50 5000
## 297          surface water                         1-L grab  50 5000
## 298          surface water                         1-L grab  50 5000
## 299          surface water                         1-L grab  50 5000
## 300          surface water                         1-L grab  50 5000
## 301          surface water                         1-L grab  50 5000
## 302          surface water                         1-L grab  50 5000
## 303          surface water                         1-L grab  50 5000
## 304          surface water                         1-L grab  50 5000
## 305          surface water                         1-L grab  50 5000
## 306          surface water                         1-L grab  50 5000
## 307          surface water                         1-L grab  50 5000
## 308          surface water                         1-L grab  50 5000
##     Sample.Type season fiber.correction.factor fiber.correction.factor.sd
## 1        sample   <NA>                1.000000                         NA
## 2        sample   <NA>                1.000000                         NA
## 3        sample   <NA>                1.000000                         NA
## 4        sample   <NA>                1.000000                         NA
## 5        sample   <NA>                1.000000                         NA
## 6        sample   <NA>                1.000000                         NA
## 7        sample   <NA>                1.000000                         NA
## 8        sample   <NA>                1.000000                         NA
## 9        sample   <NA>                1.000000                         NA
## 10       sample   <NA>                1.000000                         NA
## 11       sample   <NA>                1.000000                         NA
## 12       sample   <NA>                1.000000                         NA
## 13       sample    dry                1.000000                         NA
## 14       sample    dry                1.000000                         NA
## 15       sample    dry                1.000000                         NA
## 16       sample    dry                1.000000                         NA
## 17       sample    dry                1.000000                         NA
## 18       sample   <NA>                1.000000                         NA
## 19       sample    dry                1.000000                         NA
## 20       sample    dry                1.000000                         NA
## 21       sample    dry                1.000000                         NA
## 22       sample    dry                1.000000                         NA
## 23       sample    dry                1.000000                         NA
## 24       sample    dry                1.000000                         NA
## 25       sample   <NA>                1.000000                         NA
## 26       sample    wet                1.000000                         NA
## 27       sample    wet                1.000000                         NA
## 28       sample   <NA>                1.000000                         NA
## 29       sample    wet                1.000000                         NA
## 30       sample   <NA>                1.000000                         NA
## 31       sample   <NA>                1.000000                         NA
## 32       sample   <NA>                1.000000                         NA
## 33       sample   <NA>                1.000000                         NA
## 34       sample   <NA>                1.000000                         NA
## 35       sample   <NA>                1.000000                         NA
## 36       sample   <NA>                1.000000                         NA
## 37       sample   <NA>                1.000000                         NA
## 38       sample   <NA>                1.000000                         NA
## 39       sample   <NA>                1.000000                         NA
## 40       sample   <NA>                1.000000                         NA
## 41       sample   <NA>                1.000000                         NA
## 42       sample   <NA>                1.000000                         NA
## 43       sample   <NA>                1.000000                         NA
## 44       sample   <NA>                1.000000                         NA
## 45       sample   <NA>                1.000000                         NA
## 46       sample   <NA>                1.000000                         NA
## 47       sample   <NA>                1.000000                         NA
## 48       sample   <NA>                1.000000                         NA
## 49       sample   <NA>                1.000000                         NA
## 50       sample   <NA>                1.000000                         NA
## 51       sample   <NA>                1.000000                         NA
## 52       sample   <NA>                1.000000                         NA
## 53       sample   <NA>                1.000000                         NA
## 54       sample   <NA>                1.000000                         NA
## 55       sample   <NA>                1.000000                         NA
## 56       sample   <NA>                1.000000                         NA
## 57       sample   <NA>                1.000000                         NA
## 58       sample   <NA>                1.000000                         NA
## 59       sample   <NA>                1.000000                         NA
## 60       sample   <NA>                1.000000                         NA
## 61       sample   <NA>                1.000000                         NA
## 62       sample   <NA>                1.000000                         NA
## 63       sample   <NA>                1.000000                         NA
## 64       sample   <NA>                1.000000                         NA
## 65       sample   <NA>                1.000000                         NA
## 66       sample   <NA>                1.000000                         NA
## 67       sample   <NA>                1.000000                         NA
## 68       sample   <NA>                1.000000                         NA
## 69       sample   <NA>                1.000000                         NA
## 70       sample   <NA>                1.000000                         NA
## 71       sample   <NA>                1.000000                         NA
## 72       sample   <NA>                1.000000                         NA
## 73       sample   <NA>                1.000000                         NA
## 74       sample   <NA>                1.000000                         NA
## 75       sample   <NA>                1.000000                         NA
## 76       sample   <NA>                1.000000                         NA
## 77       sample   <NA>                1.000000                         NA
## 78       sample   <NA>                1.000000                         NA
## 79       sample   <NA>                1.000000                         NA
## 80       sample   <NA>                1.000000                         NA
## 81       sample   <NA>                1.000000                         NA
## 82       sample   <NA>                1.000000                         NA
## 83       sample   <NA>                1.000000                         NA
## 84       sample   <NA>                1.000000                         NA
## 85       sample   <NA>                1.000000                         NA
## 86       sample   <NA>                1.000000                         NA
## 87       sample   <NA>                1.000000                         NA
## 88       sample   <NA>                1.000000                         NA
## 89       sample   <NA>                1.000000                         NA
## 90       sample   <NA>                1.000000                         NA
## 91       sample   <NA>                1.000000                         NA
## 92       sample   <NA>                1.000000                         NA
## 93       sample   <NA>                1.000000                         NA
## 94       sample   <NA>                1.000000                         NA
## 95       sample   <NA>                1.000000                         NA
## 96       sample   <NA>                1.000000                         NA
## 97       sample   <NA>                1.000000                         NA
## 98       sample   <NA>                1.000000                         NA
## 99       sample   <NA>                1.000000                         NA
## 100      sample   <NA>                1.000000                         NA
## 101      sample   <NA>                1.000000                         NA
## 102      sample   <NA>                1.000000                         NA
## 103      sample   <NA>                1.000000                         NA
## 104      sample   <NA>                1.000000                         NA
## 105      sample   <NA>                1.000000                         NA
## 106      sample   <NA>                1.000000                         NA
## 107      sample   <NA>                1.000000                         NA
## 108      sample   <NA>                1.000000                         NA
## 109      sample   <NA>                1.000000                         NA
## 110      sample   <NA>                1.000000                         NA
## 111      sample   <NA>                1.000000                         NA
## 112      sample   <NA>                1.000000                         NA
## 113      sample   <NA>                1.000000                         NA
## 114      sample   <NA>                1.000000                         NA
## 115      sample   <NA>                1.000000                         NA
## 116      sample   <NA>                1.000000                         NA
## 117      sample   <NA>                1.000000                         NA
## 118      sample   <NA>                1.000000                         NA
## 119      sample   <NA>                1.000000                         NA
## 120      sample   <NA>                1.000000                         NA
## 121      sample   <NA>                1.000000                         NA
## 122      sample   <NA>                1.000000                         NA
## 123      sample   <NA>                1.000000                         NA
## 124      sample   <NA>                1.000000                         NA
## 125      sample   <NA>                1.000000                         NA
## 126      sample   <NA>                1.000000                         NA
## 127      sample   <NA>                1.000000                         NA
## 128      sample   <NA>                1.000000                         NA
## 129      sample   <NA>                1.000000                         NA
## 130      sample   <NA>                1.000000                         NA
## 131      sample   <NA>                1.000000                         NA
## 132      sample   <NA>                1.000000                         NA
## 133      sample   <NA>                1.000000                         NA
## 134      sample   <NA>                1.000000                         NA
## 135      sample   <NA>                1.000000                         NA
## 136      sample   <NA>                1.000000                         NA
## 137      sample   <NA>                1.000000                         NA
## 138      sample   <NA>                1.000000                         NA
## 139      sample   <NA>                1.000000                         NA
## 140      sample   <NA>                1.000000                         NA
## 141      sample   <NA>                1.000000                         NA
## 142      sample   <NA>                1.000000                         NA
## 143      sample   <NA>                1.000000                         NA
## 144      sample   <NA>                1.000000                         NA
## 145      sample   <NA>                1.000000                         NA
## 146      sample   <NA>                1.000000                         NA
## 147      sample   <NA>                1.000000                         NA
## 148      sample   <NA>                1.000000                         NA
## 149      sample   <NA>                1.000000                         NA
## 150      sample   <NA>                1.000000                         NA
## 151      sample   <NA>                1.000000                         NA
## 152      sample   <NA>                1.000000                         NA
## 153      sample   <NA>                1.000000                         NA
## 154      sample   <NA>                1.000000                         NA
## 155      sample   <NA>                1.000000                         NA
## 156      sample   <NA>                1.000000                         NA
## 157      sample   <NA>                1.000000                         NA
## 158      sample   <NA>                1.000000                         NA
## 159      sample   <NA>                1.000000                         NA
## 160      sample   <NA>                1.000000                         NA
## 161      sample   <NA>                1.000000                         NA
## 162      sample   <NA>                1.000000                         NA
## 163      sample   <NA>                1.000000                         NA
## 164      sample   <NA>                1.000000                         NA
## 165      sample   <NA>                1.000000                         NA
## 166      sample   <NA>                1.000000                         NA
## 167      sample   <NA>                1.000000                         NA
## 168      sample   <NA>                1.000000                         NA
## 169      sample   <NA>                1.000000                         NA
## 170      sample   <NA>                1.000000                         NA
## 171      sample   <NA>                1.000000                         NA
## 172      sample   <NA>                1.000000                         NA
## 173      sample   <NA>                1.000000                         NA
## 174      sample   <NA>                1.000000                         NA
## 175      sample   <NA>                1.000000                         NA
## 176      sample   <NA>                1.000000                         NA
## 177      sample   <NA>                1.000000                         NA
## 178      sample   <NA>                1.000000                         NA
## 179      sample   <NA>                1.000000                         NA
## 180      sample   <NA>                1.000000                         NA
## 181      sample   <NA>                1.000000                         NA
## 182      sample   <NA>                1.000000                         NA
## 183      sample   <NA>                1.000000                         NA
## 184      sample   <NA>                1.000000                         NA
## 185      sample   <NA>                1.000000                         NA
## 186      sample   <NA>                1.000000                         NA
## 187      sample   <NA>                1.000000                         NA
## 188      sample   <NA>                1.000000                         NA
## 189      sample   <NA>                1.000000                         NA
## 190      sample   <NA>                1.000000                         NA
## 191      sample   <NA>                1.000000                         NA
## 192      sample   <NA>                1.000000                         NA
## 193      sample   <NA>                1.000000                         NA
## 194      sample   <NA>                1.000000                         NA
## 195      sample   <NA>                1.000000                         NA
## 196      sample   <NA>                1.000000                         NA
## 197      sample   <NA>                1.000000                         NA
## 198      sample   <NA>                1.000000                         NA
## 199      sample   <NA>                1.000000                         NA
## 200      sample   <NA>                1.000000                         NA
## 201      sample   <NA>                1.000000                         NA
## 202      sample    dry                4.598399                   1.393976
## 203      sample    wet                4.598399                   1.393976
## 204      sample    dry                4.598399                   1.393976
## 205      sample    wet                4.598399                   1.393976
## 206      sample    wet                4.598399                   1.393976
## 207      sample    dry                4.598399                   1.393976
## 208      sample    wet                4.598399                   1.393976
## 209      sample    dry                4.598399                   1.393976
## 210      sample    wet                4.598399                   1.393976
## 211      sample    dry                4.598399                   1.393976
## 212      sample    wet                4.598399                   1.393976
## 213      sample    dry                4.598399                   1.393976
## 214      sample    wet                4.598399                   1.393976
## 215      sample    wet                4.598399                   1.393976
## 216      sample    dry                4.598399                   1.393976
## 217      sample    wet                4.598399                   1.393976
## 218      sample    dry                4.598399                   1.393976
## 219      sample    dry                4.598399                   1.393976
## 220      sample    wet                4.598399                   1.393976
## 221      sample    wet                4.598399                   1.393976
## 222      sample    dry                4.598399                   1.393976
## 223      sample    wet                4.598399                   1.393976
## 224      sample    dry                4.598399                   1.393976
## 225      sample    wet                4.598399                   1.393976
## 226      sample    dry                4.598399                   1.393976
## 227      sample    wet                4.598399                   1.393976
## 228      sample    dry                4.598399                   1.393976
## 229      sample    dry                4.598399                   1.393976
## 230      sample    wet                4.598399                   1.393976
## 231      sample    dry                4.598399                   1.393976
## 232      sample    wet                4.598399                   1.393976
## 233      sample    dry                4.598399                   1.393976
## 234      sample    wet                4.598399                   1.393976
## 235      sample    wet                4.598399                   1.393976
## 236      sample    wet                4.598399                   1.393976
## 237      sample    wet                4.598399                   1.393976
## 238      sample    dry                4.598399                   1.393976
## 239      sample    wet                4.598399                   1.393976
## 240      sample    dry                4.598399                   1.393976
## 241      sample    wet                4.598399                   1.393976
## 242      sample    dry                4.598399                   1.393976
## 243      sample    wet                4.598399                   1.393976
## 244      sample    dry                4.598399                   1.393976
## 245      sample    dry                4.598399                   1.393976
## 246      sample    wet                4.598399                   1.393976
## 247      sample    dry                4.598399                   1.393976
## 248      sample    wet                4.598399                   1.393976
## 249      sample    dry                4.598399                   1.393976
## 250      sample    wet                4.598399                   1.393976
## 251      sample    dry                4.598399                   1.393976
## 252      sample    wet                4.598399                   1.393976
## 253      sample    dry                4.598399                   1.393976
## 254      sample    dry                4.598399                   1.393976
## 255      sample    wet                4.598399                   1.393976
## 256      sample    dry                4.598399                   1.393976
## 257      sample    wet                4.598399                   1.393976
## 258      sample    dry                4.598399                   1.393976
## 259      sample    wet                4.598399                   1.393976
## 260      sample    dry                1.000000                         NA
## 261      sample    wet                1.000000                         NA
## 262      sample    dry                1.000000                         NA
## 263      sample    wet                1.000000                         NA
## 264      sample    dry                1.000000                         NA
## 265      sample    wet                1.000000                         NA
## 266      sample    dry                1.000000                         NA
## 267      sample    wet                1.000000                         NA
## 268      sample    dry                1.000000                         NA
## 269      sample    wet                1.000000                         NA
## 270      sample    dry                1.000000                         NA
## 271      sample    wet                1.000000                         NA
## 272      sample    dry                1.000000                         NA
## 273      sample    dry                1.000000                         NA
## 274      sample    dry                1.000000                         NA
## 275      sample    wet                1.000000                         NA
## 276      sample    wet                1.000000                         NA
## 277      sample    dry                1.000000                         NA
## 278      sample    dry                1.000000                         NA
## 279      sample    dry                1.000000                         NA
## 280      sample    dry                1.000000                         NA
## 281      sample    wet                1.000000                         NA
## 282      sample    wet                1.000000                         NA
## 283      sample    dry                1.000000                         NA
## 284      sample    wet                1.000000                         NA
## 285      sample    wet                1.000000                         NA
## 286      sample    wet                1.000000                         NA
## 287      sample    wet                1.000000                         NA
## 288      sample    wet                1.000000                         NA
## 289      sample    dry                1.000000                         NA
## 290      sample    wet                1.000000                         NA
## 291      sample    dry                1.000000                         NA
## 292      sample    wet                1.000000                         NA
## 293      sample    dry                1.000000                         NA
## 294      sample    wet                1.000000                         NA
## 295      sample    dry                1.000000                         NA
## 296      sample    dry                1.000000                         NA
## 297      sample    wet                1.000000                         NA
## 298      sample    dry                1.000000                         NA
## 299      sample    wet                1.000000                         NA
## 300      sample    wet                1.000000                         NA
## 301      sample    dry                1.000000                         NA
## 302      sample    wet                1.000000                         NA
## 303      sample    dry                1.000000                         NA
## 304      sample    wet                1.000000                         NA
## 305      sample    dry                1.000000                         NA
## 306      sample    wet                1.000000                         NA
## 307      sample    dry                1.000000                         NA
## 308      sample    wet                1.000000                         NA
##     fiber.correction.factor.n particles.L.blank.corrected.fiber.corrected
## 1                          NA                                1.630000e+00
## 2                          NA                                1.650000e+00
## 3                          NA                                7.200000e+00
## 4                          NA                                5.630000e+00
## 5                          NA                                4.940000e+00
## 6                          NA                                8.430000e+00
## 7                          NA                                1.006000e+01
## 8                          NA                                2.310000e+00
## 9                          NA                                1.090000e+00
## 10                         NA                                1.784000e+01
## 11                         NA                                1.236000e+01
## 12                         NA                                2.441000e+01
## 13                         NA                                6.450000e-02
## 14                         NA                                1.150000e-02
## 15                         NA                                1.778000e-01
## 16                         NA                                4.210000e-02
## 17                         NA                                3.000000e-03
## 18                         NA                                5.400000e-03
## 19                         NA                                1.860000e-02
## 20                         NA                                2.330000e-02
## 21                         NA                                2.220000e-02
## 22                         NA                                7.780000e-02
## 23                         NA                                3.700000e-03
## 24                         NA                                5.500000e-03
## 25                         NA                                1.083000e-01
## 26                         NA                                1.593000e-01
## 27                         NA                                1.816000e-01
## 28                         NA                                7.500000e-03
## 29                         NA                                6.830000e-02
## 30                         NA                                          NA
## 31                         NA                                          NA
## 32                         NA                                          NA
## 33                         NA                                          NA
## 34                         NA                                          NA
## 35                         NA                                          NA
## 36                         NA                                          NA
## 37                         NA                                          NA
## 38                         NA                                          NA
## 39                         NA                                          NA
## 40                         NA                                          NA
## 41                         NA                                          NA
## 42                         NA                                          NA
## 43                         NA                                          NA
## 44                         NA                                          NA
## 45                         NA                                          NA
## 46                         NA                                          NA
## 47                         NA                                          NA
## 48                         NA                                          NA
## 49                         NA                                          NA
## 50                         NA                                          NA
## 51                         NA                                          NA
## 52                         NA                                          NA
## 53                         NA                                          NA
## 54                         NA                                          NA
## 55                         NA                                          NA
## 56                         NA                                          NA
## 57                         NA                                          NA
## 58                         NA                                          NA
## 59                         NA                                          NA
## 60                         NA                                          NA
## 61                         NA                                          NA
## 62                         NA                                          NA
## 63                         NA                                          NA
## 64                         NA                                          NA
## 65                         NA                                          NA
## 66                         NA                                          NA
## 67                         NA                                          NA
## 68                         NA                                          NA
## 69                         NA                                          NA
## 70                         NA                                          NA
## 71                         NA                                          NA
## 72                         NA                                          NA
## 73                         NA                                          NA
## 74                         NA                                          NA
## 75                         NA                                          NA
## 76                         NA                                          NA
## 77                         NA                                          NA
## 78                         NA                                          NA
## 79                         NA                                          NA
## 80                         NA                                          NA
## 81                         NA                                          NA
## 82                         NA                                          NA
## 83                         NA                                          NA
## 84                         NA                                          NA
## 85                         NA                                          NA
## 86                         NA                                          NA
## 87                         NA                                          NA
## 88                         NA                                          NA
## 89                         NA                                          NA
## 90                         NA                                          NA
## 91                         NA                                          NA
## 92                         NA                                          NA
## 93                         NA                                          NA
## 94                         NA                                          NA
## 95                         NA                                          NA
## 96                         NA                                          NA
## 97                         NA                                          NA
## 98                         NA                                          NA
## 99                         NA                                          NA
## 100                        NA                                          NA
## 101                        NA                                          NA
## 102                        NA                                          NA
## 103                        NA                                          NA
## 104                        NA                                          NA
## 105                        NA                                          NA
## 106                        NA                                          NA
## 107                        NA                                          NA
## 108                        NA                                          NA
## 109                        NA                                          NA
## 110                        NA                                          NA
## 111                        NA                                          NA
## 112                        NA                                          NA
## 113                        NA                                          NA
## 114                        NA                                          NA
## 115                        NA                                          NA
## 116                        NA                                          NA
## 117                        NA                                          NA
## 118                        NA                                          NA
## 119                        NA                                          NA
## 120                        NA                                          NA
## 121                        NA                                          NA
## 122                        NA                                          NA
## 123                        NA                                          NA
## 124                        NA                                          NA
## 125                        NA                                          NA
## 126                        NA                                          NA
## 127                        NA                                          NA
## 128                        NA                                          NA
## 129                        NA                                          NA
## 130                        NA                                          NA
## 131                        NA                                          NA
## 132                        NA                                          NA
## 133                        NA                                          NA
## 134                        NA                                          NA
## 135                        NA                                          NA
## 136                        NA                                          NA
## 137                        NA                                          NA
## 138                        NA                                          NA
## 139                        NA                                          NA
## 140                        NA                                          NA
## 141                        NA                                          NA
## 142                        NA                                          NA
## 143                        NA                                          NA
## 144                        NA                                          NA
## 145                        NA                                          NA
## 146                        NA                                          NA
## 147                        NA                                          NA
## 148                        NA                                          NA
## 149                        NA                                          NA
## 150                        NA                                          NA
## 151                        NA                                          NA
## 152                        NA                                          NA
## 153                        NA                                          NA
## 154                        NA                                          NA
## 155                        NA                                          NA
## 156                        NA                                          NA
## 157                        NA                                          NA
## 158                        NA                                          NA
## 159                        NA                                          NA
## 160                        NA                                          NA
## 161                        NA                                          NA
## 162                        NA                                          NA
## 163                        NA                                          NA
## 164                        NA                                          NA
## 165                        NA                                          NA
## 166                        NA                                          NA
## 167                        NA                                          NA
## 168                        NA                                          NA
## 169                        NA                                          NA
## 170                        NA                                          NA
## 171                        NA                                          NA
## 172                        NA                                          NA
## 173                        NA                                          NA
## 174                        NA                                          NA
## 175                        NA                                          NA
## 176                        NA                                          NA
## 177                        NA                                          NA
## 178                        NA                                          NA
## 179                        NA                                          NA
## 180                        NA                                          NA
## 181                        NA                                          NA
## 182                        NA                                          NA
## 183                        NA                                          NA
## 184                        NA                                          NA
## 185                        NA                                          NA
## 186                        NA                                          NA
## 187                        NA                                          NA
## 188                        NA                                          NA
## 189                        NA                                          NA
## 190                        NA                                          NA
## 191                        NA                                          NA
## 192                        NA                                          NA
## 193                        NA                                          NA
## 194                        NA                                          NA
## 195                        NA                                          NA
## 196                        NA                                          NA
## 197                        NA                                          NA
## 198                        NA                                          NA
## 199                        NA                                          NA
## 200                        NA                                          NA
## 201                        NA                                          NA
## 202                         9                                1.057632e-04
## 203                         9                                2.811461e-02
## 204                         9                                2.018697e-03
## 205                         9                                8.681777e-03
## 206                         9                                2.349782e-03
## 207                         9                                3.816671e-04
## 208                         9                                2.133657e-03
## 209                         9                                3.559161e-03
## 210                         9                                3.352233e-03
## 211                         9                                1.041537e-02
## 212                         9                                1.997085e-02
## 213                         9                                8.644990e-04
## 214                         9                                2.556296e-01
## 215                         9                                4.046591e-04
## 216                         9                                7.495391e-04
## 217                         9                                5.793983e-04
## 218                         9                                6.391775e-04
## 219                         9                                0.000000e+00
## 220                         9                                1.057632e-04
## 221                         9                                1.002451e-03
## 222                         9                                9.196798e-05
## 223                         9                                3.632735e-04
## 224                         9                                6.391775e-04
## 225                         9                                3.586751e-04
## 226                         9                                2.299200e-05
## 227                         9                                4.414463e-04
## 228                         9                                2.575103e-04
## 229                         9                                4.515628e-03
## 230                         9                                1.223174e-03
## 231                         9                                1.641628e-03
## 232                         9                                1.140403e-03
## 233                         9                                7.035551e-04
## 234                         9                                2.372774e-03
## 235                         9                                1.820966e-03
## 236                         9                                1.351929e-03
## 237                         9                                1.255363e-03
## 238                         9                                8.736958e-05
## 239                         9                                1.747392e-04
## 240                         9                                3.126911e-04
## 241                         9                                2.483136e-04
## 242                         9                                1.747392e-04
## 243                         9                                3.126911e-04
## 244                         9                                1.103616e-04
## 245                         9                                5.150207e-04
## 246                         9                                1.085222e-03
## 247                         9                                8.323102e-04
## 248                         9                                1.197883e-02
## 249                         9                                5.885951e-04
## 250                         9                                2.244019e-03
## 251                         9                                1.333076e-02
## 252                         9                                6.364184e-03
## 253                         9                                1.958918e-03
## 254                         9                                2.713055e-04
## 255                         9                                4.230527e-04
## 256                         9                                2.929180e-03
## 257                         9                                6.479144e-03
## 258                         9                                3.724703e-04
## 259                         9                                6.023903e-04
## 260                        NA                                3.465347e+00
## 261                        NA                                2.734878e+00
## 262                        NA                                7.433102e+00
## 263                        NA                                6.277464e-01
## 264                        NA                                1.950959e+00
## 265                        NA                                4.984424e+00
## 266                        NA                                2.325107e+00
## 267                        NA                                1.582779e+00
## 268                        NA                                2.703562e+00
## 269                        NA                                2.551020e+00
## 270                        NA                                6.578947e+00
## 271                        NA                                1.871102e+01
## 272                        NA                                3.000000e+00
## 273                        NA                                1.640420e+00
## 274                        NA                                8.671523e+00
## 275                        NA                                6.523157e-01
## 276                        NA                                0.000000e+00
## 277                        NA                                1.811594e+00
## 278                        NA                                7.095745e-01
## 279                        NA                                1.262626e+00
## 280                        NA                                3.664755e+00
## 281                        NA                                3.098500e+00
## 282                        NA                                1.279591e+00
## 283                        NA                                7.619048e+00
## 284                        NA                                2.412281e+00
## 285                        NA                                1.357323e+01
## 286                        NA                                2.383222e+00
## 287                        NA                                9.433962e-01
## 288                        NA                                3.570315e+01
## 289                        NA                                2.252599e+00
## 290                        NA                                2.202268e+00
## 291                        NA                                1.605652e+00
## 292                        NA                                4.269450e+00
## 293                        NA                                3.502069e+00
## 294                        NA                                1.876590e+01
## 295                        NA                                6.298450e+00
## 296                        NA                                9.980040e-01
## 297                        NA                                6.144393e+00
## 298                        NA                                3.346080e+00
## 299                        NA                                1.595745e+00
## 300                        NA                                2.666667e+00
## 301                        NA                                4.338395e+00
## 302                        NA                                9.931383e+00
## 303                        NA                                3.333333e+00
## 304                        NA                                2.833333e+00
## 305                        NA                                5.086072e+00
## 306                        NA                                5.243089e+00
## 307                        NA                                2.764613e+00
## 308                        NA                                4.427577e+00
##                   locationNew                matrix
## 1                     general                 Storm
## 2                     general                 Storm
## 3                     general                 Storm
## 4                     general                 Storm
## 5                     general                 Storm
## 6                     general                 Storm
## 7                     general                 Storm
## 8                     general                 Storm
## 9                     general                 Storm
## 10                    general                 Storm
## 11                    general                 Storm
## 12                    general                 Storm
## 13                    general                  WWTP
## 14                    general                  WWTP
## 15                    general                  WWTP
## 16                    general                  WWTP
## 17                    general                  WWTP
## 18                    general                  WWTP
## 19                    general                  WWTP
## 20                    general                  WWTP
## 21                    general                  WWTP
## 22                    general                  WWTP
## 23                    general                  WWTP
## 24                    general                  WWTP
## 25                    general                  WWTP
## 26                    general                  WWTP
## 27                    general                  WWTP
## 28                    general                  WWTP
## 29                    general                  WWTP
## 30            Lower South Bay                  Fish
## 31            Lower South Bay                  Fish
## 32            Lower South Bay                  Fish
## 33            Lower South Bay                  Fish
## 34            Lower South Bay                  Fish
## 35            Lower South Bay                  Fish
## 36            Lower South Bay                  Fish
## 37            Lower South Bay                  Fish
## 38            Lower South Bay                  Fish
## 39            Lower South Bay                  Fish
## 40            Lower South Bay                  Fish
## 41            Lower South Bay                  Fish
## 42            Lower South Bay                  Fish
## 43            Lower South Bay                  Fish
## 44                Tomales Bay                  Fish
## 45                Tomales Bay                  Fish
## 46                Tomales Bay                  Fish
## 47                Tomales Bay                  Fish
## 48                Tomales Bay                  Fish
## 49                Tomales Bay                  Fish
## 50                Tomales Bay                  Fish
## 51                Tomales Bay                  Fish
## 52                Tomales Bay                  Fish
## 53                Tomales Bay                  Fish
## 54                Tomales Bay                  Fish
## 55                Tomales Bay                  Fish
## 56                Tomales Bay                  Fish
## 57                Tomales Bay                  Fish
## 58                Tomales Bay                  Fish
## 59                Tomales Bay                  Fish
## 60                Tomales Bay                  Fish
## 61                Tomales Bay                  Fish
## 62                Tomales Bay                  Fish
## 63                Tomales Bay                  Fish
## 64                Tomales Bay                  Fish
## 65                Tomales Bay                  Fish
## 66                Tomales Bay                  Fish
## 67                Tomales Bay                  Fish
## 68                Tomales Bay                  Fish
## 69                Tomales Bay                  Fish
## 70                Tomales Bay                  Fish
## 71                Tomales Bay                  Fish
## 72                Tomales Bay                  Fish
## 73                Tomales Bay                  Fish
## 74                Central Bay                  Fish
## 75                Central Bay                  Fish
## 76                Central Bay                  Fish
## 77                Central Bay                  Fish
## 78                Central Bay                  Fish
## 79                Central Bay                  Fish
## 80                Central Bay                  Fish
## 81                Central Bay                  Fish
## 82                Central Bay                  Fish
## 83                Central Bay                  Fish
## 84                Central Bay                  Fish
## 85                Central Bay                  Fish
## 86                Central Bay                  Fish
## 87                Central Bay                  Fish
## 88                Central Bay                  Fish
## 89                Central Bay                  Fish
## 90                Central Bay                  Fish
## 91                Central Bay                  Fish
## 92                Central Bay                  Fish
## 93                Central Bay                  Fish
## 94                Central Bay                  Fish
## 95                Central Bay                  Fish
## 96                Central Bay                  Fish
## 97                Central Bay                  Fish
## 98                Central Bay                  Fish
## 99                Central Bay                  Fish
## 100               Central Bay                  Fish
## 101               Central Bay                  Fish
## 102               Central Bay                  Fish
## 103               Central Bay                  Fish
## 104               Central Bay                  Fish
## 105               Central Bay                  Fish
## 106               Central Bay                  Fish
## 107               Central Bay                  Fish
## 108               Central Bay                  Fish
## 109               Central Bay                  Fish
## 110               Central Bay                  Fish
## 111               Central Bay                  Fish
## 112                   general                  Fish
## 113                   general                  Fish
## 114                   general                  Fish
## 115                   general                  Fish
## 116                   general                  Fish
## 117                   general                  Fish
## 118                   general                  Fish
## 119                   general                  Fish
## 120                   general                  Fish
## 121                   general                  Fish
## 122                 South Bay                  Fish
## 123                 South Bay                  Fish
## 124                 South Bay                  Fish
## 125                 South Bay                  Fish
## 126                 South Bay                  Fish
## 127                 South Bay                  Fish
## 128                 South Bay                  Fish
## 129                 South Bay                  Fish
## 130                 South Bay                  Fish
## 131                 South Bay                  Fish
## 132                 South Bay                  Fish
## 133                 South Bay                  Fish
## 134                 South Bay                  Fish
## 135                 South Bay                  Fish
## 136                 South Bay                  Fish
## 137                 South Bay                  Fish
## 138                 South Bay                  Fish
## 139                 South Bay                  Fish
## 140                 South Bay                  Fish
## 141                 South Bay                  Fish
## 142               Central Bay                  Fish
## 143               Central Bay                  Fish
## 144               Central Bay                  Fish
## 145               Central Bay                  Fish
## 146               Central Bay                  Fish
## 147               Central Bay                  Fish
## 148               Central Bay                  Fish
## 149               Central Bay                  Fish
## 150               Central Bay                  Fish
## 151               Central Bay                  Fish
## 152               Central Bay                  Fish
## 153               Central Bay                  Fish
## 154               Central Bay                  Fish
## 155               Central Bay                  Fish
## 156               Central Bay                  Fish
## 157               Central Bay                  Fish
## 158               Central Bay                  Fish
## 159               Central Bay                  Fish
## 160               Central Bay                  Fish
## 161               Central Bay                  Fish
## 162                   general                  Fish
## 163                   general                  Fish
## 164                   general                  Fish
## 165                   general                  Fish
## 166                   general                  Fish
## 167                   general                  Fish
## 168                   general                  Fish
## 169                   general                  Fish
## 170                   general                  Fish
## 171                   general                  Fish
## 172               Tomales Bay                  Fish
## 173               Tomales Bay                  Fish
## 174               Tomales Bay                  Fish
## 175               Tomales Bay                  Fish
## 176               Tomales Bay                  Fish
## 177               Tomales Bay                  Fish
## 178               Tomales Bay                  Fish
## 179               Tomales Bay                  Fish
## 180               Tomales Bay                  Fish
## 181               Tomales Bay                  Fish
## 182                   general              Sediment
## 183               Central Bay              Sediment
## 184               Central Bay              Sediment
## 185               Central Bay              Sediment
## 186               Central Bay              Sediment
## 187           Lower South Bay              Sediment
## 188           Lower South Bay              Sediment
## 189           Lower South Bay              Sediment
## 190                   general              Sediment
## 191                 South Bay              Sediment
## 192                 South Bay              Sediment
## 193                 South Bay              Sediment
## 194                   general              Sediment
## 195                   general              Sediment
## 196                   general              Sediment
## 197                   general              Sediment
## 198                   general              Sediment
## 199                   general              Sediment
## 200               Tomales Bay              Sediment
## 201               Tomales Bay              Sediment
## 202               Central Bay Surface (Manta Trawl)
## 203               Central Bay Surface (Manta Trawl)
## 204               Central Bay Surface (Manta Trawl)
## 205               Central Bay Surface (Manta Trawl)
## 206               Central Bay Surface (Manta Trawl)
## 207               Central Bay Surface (Manta Trawl)
## 208               Central Bay Surface (Manta Trawl)
## 209               Central Bay Surface (Manta Trawl)
## 210               Central Bay Surface (Manta Trawl)
## 211               Central Bay Surface (Manta Trawl)
## 212               Central Bay Surface (Manta Trawl)
## 213               Central Bay Surface (Manta Trawl)
## 214               Central Bay Surface (Manta Trawl)
## 215 National Marine Sanctuary Surface (Manta Trawl)
## 216 National Marine Sanctuary Surface (Manta Trawl)
## 217 National Marine Sanctuary Surface (Manta Trawl)
## 218 National Marine Sanctuary Surface (Manta Trawl)
## 219 National Marine Sanctuary Surface (Manta Trawl)
## 220 National Marine Sanctuary Surface (Manta Trawl)
## 221 National Marine Sanctuary Surface (Manta Trawl)
## 222 National Marine Sanctuary Surface (Manta Trawl)
## 223 National Marine Sanctuary Surface (Manta Trawl)
## 224 National Marine Sanctuary Surface (Manta Trawl)
## 225 National Marine Sanctuary Surface (Manta Trawl)
## 226 National Marine Sanctuary Surface (Manta Trawl)
## 227 National Marine Sanctuary Surface (Manta Trawl)
## 228 National Marine Sanctuary Surface (Manta Trawl)
## 229           Lower South Bay Surface (Manta Trawl)
## 230           Lower South Bay Surface (Manta Trawl)
## 231           Lower South Bay Surface (Manta Trawl)
## 232           Lower South Bay Surface (Manta Trawl)
## 233           Lower South Bay Surface (Manta Trawl)
## 234           Lower South Bay Surface (Manta Trawl)
## 235 National Marine Sanctuary Surface (Manta Trawl)
## 236 National Marine Sanctuary Surface (Manta Trawl)
## 237 National Marine Sanctuary Surface (Manta Trawl)
## 238 National Marine Sanctuary Surface (Manta Trawl)
## 239 National Marine Sanctuary Surface (Manta Trawl)
## 240 National Marine Sanctuary Surface (Manta Trawl)
## 241 National Marine Sanctuary Surface (Manta Trawl)
## 242 National Marine Sanctuary Surface (Manta Trawl)
## 243 National Marine Sanctuary Surface (Manta Trawl)
## 244 National Marine Sanctuary Surface (Manta Trawl)
## 245                 South Bay Surface (Manta Trawl)
## 246                 South Bay Surface (Manta Trawl)
## 247                 South Bay Surface (Manta Trawl)
## 248                 South Bay Surface (Manta Trawl)
## 249                 South Bay Surface (Manta Trawl)
## 250                 South Bay Surface (Manta Trawl)
## 251                 South Bay Surface (Manta Trawl)
## 252                 South Bay Surface (Manta Trawl)
## 253                   general Surface (Manta Trawl)
## 254                   general Surface (Manta Trawl)
## 255                   general Surface (Manta Trawl)
## 256                   general Surface (Manta Trawl)
## 257                   general Surface (Manta Trawl)
## 258                   general Surface (Manta Trawl)
## 259                   general Surface (Manta Trawl)
## 260               Central Bay     Surface (1L-grab)
## 261               Central Bay     Surface (1L-grab)
## 262               Central Bay     Surface (1L-grab)
## 263               Central Bay     Surface (1L-grab)
## 264               Central Bay     Surface (1L-grab)
## 265               Central Bay     Surface (1L-grab)
## 266               Central Bay     Surface (1L-grab)
## 267               Central Bay     Surface (1L-grab)
## 268               Central Bay     Surface (1L-grab)
## 269               Central Bay     Surface (1L-grab)
## 270               Central Bay     Surface (1L-grab)
## 271               Central Bay     Surface (1L-grab)
## 272 National Marine Sanctuary     Surface (1L-grab)
## 273 National Marine Sanctuary     Surface (1L-grab)
## 274 National Marine Sanctuary     Surface (1L-grab)
## 275 National Marine Sanctuary     Surface (1L-grab)
## 276 National Marine Sanctuary     Surface (1L-grab)
## 277 National Marine Sanctuary     Surface (1L-grab)
## 278 National Marine Sanctuary     Surface (1L-grab)
## 279 National Marine Sanctuary     Surface (1L-grab)
## 280 National Marine Sanctuary     Surface (1L-grab)
## 281           Lower South Bay     Surface (1L-grab)
## 282           Lower South Bay     Surface (1L-grab)
## 283           Lower South Bay     Surface (1L-grab)
## 284           Lower South Bay     Surface (1L-grab)
## 285 National Marine Sanctuary     Surface (1L-grab)
## 286 National Marine Sanctuary     Surface (1L-grab)
## 287 National Marine Sanctuary     Surface (1L-grab)
## 288 National Marine Sanctuary     Surface (1L-grab)
## 289 National Marine Sanctuary     Surface (1L-grab)
## 290 National Marine Sanctuary     Surface (1L-grab)
## 291 National Marine Sanctuary     Surface (1L-grab)
## 292 National Marine Sanctuary     Surface (1L-grab)
## 293 National Marine Sanctuary     Surface (1L-grab)
## 294 National Marine Sanctuary     Surface (1L-grab)
## 295 National Marine Sanctuary     Surface (1L-grab)
## 296                 South Bay     Surface (1L-grab)
## 297                 South Bay     Surface (1L-grab)
## 298                 South Bay     Surface (1L-grab)
## 299                 South Bay     Surface (1L-grab)
## 300                 South Bay     Surface (1L-grab)
## 301                 South Bay     Surface (1L-grab)
## 302                 South Bay     Surface (1L-grab)
## 303                   general     Surface (1L-grab)
## 304                   general     Surface (1L-grab)
## 305                   general     Surface (1L-grab)
## 306                   general     Surface (1L-grab)
## 307                   general     Surface (1L-grab)
## 308                   general     Surface (1L-grab)
##                                      locationMatrix proportion
## 1                                     general Storm  0.4675000
## 2                                     general Storm  0.4675000
## 3                                     general Storm  0.4675000
## 4                                     general Storm  0.4675000
## 5                                     general Storm  0.4675000
## 6                                     general Storm  0.4675000
## 7                                     general Storm  0.4675000
## 8                                     general Storm  0.4675000
## 9                                     general Storm  0.4675000
## 10                                    general Storm  0.4675000
## 11                                    general Storm  0.4675000
## 12                                    general Storm  0.4675000
## 13                                     general WWTP  0.2833333
## 14                                     general WWTP  0.2833333
## 15                                     general WWTP  0.2833333
## 16                                     general WWTP  0.2833333
## 17                                     general WWTP  0.2833333
## 18                                     general WWTP  0.2833333
## 19                                     general WWTP  0.2833333
## 20                                     general WWTP  0.2833333
## 21                                     general WWTP  0.2833333
## 22                                     general WWTP  0.2833333
## 23                                     general WWTP  0.2833333
## 24                                     general WWTP  0.2833333
## 25                                     general WWTP  0.2833333
## 26                                     general WWTP  0.2833333
## 27                                     general WWTP  0.2833333
## 28                                     general WWTP  0.2833333
## 29                                     general WWTP  0.2833333
## 30                             Lower South Bay Fish  0.1500000
## 31                             Lower South Bay Fish  0.1500000
## 32                             Lower South Bay Fish  0.1500000
## 33                             Lower South Bay Fish  0.1500000
## 34                             Lower South Bay Fish  0.1500000
## 35                             Lower South Bay Fish  0.1500000
## 36                             Lower South Bay Fish  0.1500000
## 37                             Lower South Bay Fish  0.1500000
## 38                             Lower South Bay Fish  0.1500000
## 39                             Lower South Bay Fish  0.1500000
## 40                             Lower South Bay Fish  0.1500000
## 41                             Lower South Bay Fish  0.1500000
## 42                             Lower South Bay Fish  0.1500000
## 43                             Lower South Bay Fish  0.1500000
## 44                                 Tomales Bay Fish  0.1300000
## 45                                 Tomales Bay Fish  0.1300000
## 46                                 Tomales Bay Fish  0.1300000
## 47                                 Tomales Bay Fish  0.1300000
## 48                                 Tomales Bay Fish  0.1300000
## 49                                 Tomales Bay Fish  0.1300000
## 50                                 Tomales Bay Fish  0.1300000
## 51                                 Tomales Bay Fish  0.1300000
## 52                                 Tomales Bay Fish  0.1300000
## 53                                 Tomales Bay Fish  0.1300000
## 54                                 Tomales Bay Fish  0.1300000
## 55                                 Tomales Bay Fish  0.1300000
## 56                                 Tomales Bay Fish  0.1300000
## 57                                 Tomales Bay Fish  0.1300000
## 58                                 Tomales Bay Fish  0.1300000
## 59                                 Tomales Bay Fish  0.1300000
## 60                                 Tomales Bay Fish  0.1300000
## 61                                 Tomales Bay Fish  0.1300000
## 62                                 Tomales Bay Fish  0.1300000
## 63                                 Tomales Bay Fish  0.1300000
## 64                                 Tomales Bay Fish  0.1300000
## 65                                 Tomales Bay Fish  0.1300000
## 66                                 Tomales Bay Fish  0.1300000
## 67                                 Tomales Bay Fish  0.1300000
## 68                                 Tomales Bay Fish  0.1300000
## 69                                 Tomales Bay Fish  0.1300000
## 70                                 Tomales Bay Fish  0.1300000
## 71                                 Tomales Bay Fish  0.1300000
## 72                                 Tomales Bay Fish  0.1300000
## 73                                 Tomales Bay Fish  0.1300000
## 74                                 Central Bay Fish  0.2100000
## 75                                 Central Bay Fish  0.2100000
## 76                                 Central Bay Fish  0.2100000
## 77                                 Central Bay Fish  0.2100000
## 78                                 Central Bay Fish  0.2100000
## 79                                 Central Bay Fish  0.2100000
## 80                                 Central Bay Fish  0.2100000
## 81                                 Central Bay Fish  0.2100000
## 82                                 Central Bay Fish  0.2100000
## 83                                 Central Bay Fish  0.2100000
## 84                                 Central Bay Fish  0.2100000
## 85                                 Central Bay Fish  0.2100000
## 86                                 Central Bay Fish  0.2100000
## 87                                 Central Bay Fish  0.2100000
## 88                                 Central Bay Fish  0.2100000
## 89                                 Central Bay Fish  0.2100000
## 90                                 Central Bay Fish  0.2100000
## 91                                 Central Bay Fish  0.2100000
## 92                                 Central Bay Fish  0.2100000
## 93                                 Central Bay Fish  0.2100000
## 94                                 Central Bay Fish  0.2100000
## 95                                 Central Bay Fish  0.2100000
## 96                                 Central Bay Fish  0.2100000
## 97                                 Central Bay Fish  0.2100000
## 98                                 Central Bay Fish  0.2100000
## 99                                 Central Bay Fish  0.2100000
## 100                                Central Bay Fish  0.2100000
## 101                                Central Bay Fish  0.2100000
## 102                                Central Bay Fish  0.2100000
## 103                                Central Bay Fish  0.2100000
## 104                                Central Bay Fish  0.2100000
## 105                                Central Bay Fish  0.2100000
## 106                                Central Bay Fish  0.2100000
## 107                                Central Bay Fish  0.2100000
## 108                                Central Bay Fish  0.2100000
## 109                                Central Bay Fish  0.2100000
## 110                                Central Bay Fish  0.2100000
## 111                                Central Bay Fish  0.2100000
## 112                                    general Fish  0.1775000
## 113                                    general Fish  0.1775000
## 114                                    general Fish  0.1775000
## 115                                    general Fish  0.1775000
## 116                                    general Fish  0.1775000
## 117                                    general Fish  0.1775000
## 118                                    general Fish  0.1775000
## 119                                    general Fish  0.1775000
## 120                                    general Fish  0.1775000
## 121                                    general Fish  0.1775000
## 122                                  South Bay Fish  0.2200000
## 123                                  South Bay Fish  0.2200000
## 124                                  South Bay Fish  0.2200000
## 125                                  South Bay Fish  0.2200000
## 126                                  South Bay Fish  0.2200000
## 127                                  South Bay Fish  0.2200000
## 128                                  South Bay Fish  0.2200000
## 129                                  South Bay Fish  0.2200000
## 130                                  South Bay Fish  0.2200000
## 131                                  South Bay Fish  0.2200000
## 132                                  South Bay Fish  0.2200000
## 133                                  South Bay Fish  0.2200000
## 134                                  South Bay Fish  0.2200000
## 135                                  South Bay Fish  0.2200000
## 136                                  South Bay Fish  0.2200000
## 137                                  South Bay Fish  0.2200000
## 138                                  South Bay Fish  0.2200000
## 139                                  South Bay Fish  0.2200000
## 140                                  South Bay Fish  0.2200000
## 141                                  South Bay Fish  0.2200000
## 142                                Central Bay Fish  0.2100000
## 143                                Central Bay Fish  0.2100000
## 144                                Central Bay Fish  0.2100000
## 145                                Central Bay Fish  0.2100000
## 146                                Central Bay Fish  0.2100000
## 147                                Central Bay Fish  0.2100000
## 148                                Central Bay Fish  0.2100000
## 149                                Central Bay Fish  0.2100000
## 150                                Central Bay Fish  0.2100000
## 151                                Central Bay Fish  0.2100000
## 152                                Central Bay Fish  0.2100000
## 153                                Central Bay Fish  0.2100000
## 154                                Central Bay Fish  0.2100000
## 155                                Central Bay Fish  0.2100000
## 156                                Central Bay Fish  0.2100000
## 157                                Central Bay Fish  0.2100000
## 158                                Central Bay Fish  0.2100000
## 159                                Central Bay Fish  0.2100000
## 160                                Central Bay Fish  0.2100000
## 161                                Central Bay Fish  0.2100000
## 162                                    general Fish  0.1775000
## 163                                    general Fish  0.1775000
## 164                                    general Fish  0.1775000
## 165                                    general Fish  0.1775000
## 166                                    general Fish  0.1775000
## 167                                    general Fish  0.1775000
## 168                                    general Fish  0.1775000
## 169                                    general Fish  0.1775000
## 170                                    general Fish  0.1775000
## 171                                    general Fish  0.1775000
## 172                                Tomales Bay Fish  0.1300000
## 173                                Tomales Bay Fish  0.1300000
## 174                                Tomales Bay Fish  0.1300000
## 175                                Tomales Bay Fish  0.1300000
## 176                                Tomales Bay Fish  0.1300000
## 177                                Tomales Bay Fish  0.1300000
## 178                                Tomales Bay Fish  0.1300000
## 179                                Tomales Bay Fish  0.1300000
## 180                                Tomales Bay Fish  0.1300000
## 181                                Tomales Bay Fish  0.1300000
## 182                                general Sediment  0.3800000
## 183                            Central Bay Sediment  0.4400000
## 184                            Central Bay Sediment  0.4400000
## 185                            Central Bay Sediment  0.4400000
## 186                            Central Bay Sediment  0.4400000
## 187                        Lower South Bay Sediment  0.5000000
## 188                        Lower South Bay Sediment  0.5000000
## 189                        Lower South Bay Sediment  0.5000000
## 190                                general Sediment  0.3800000
## 191                              South Bay Sediment  0.3900000
## 192                              South Bay Sediment  0.3900000
## 193                              South Bay Sediment  0.3900000
## 194                                general Sediment  0.3800000
## 195                                general Sediment  0.3800000
## 196                                general Sediment  0.3800000
## 197                                general Sediment  0.3800000
## 198                                general Sediment  0.3800000
## 199                                general Sediment  0.3800000
## 200                            Tomales Bay Sediment  0.1800000
## 201                            Tomales Bay Sediment  0.1800000
## 202               Central Bay Surface (Manta Trawl)  0.7321263
## 203               Central Bay Surface (Manta Trawl)  0.7321263
## 204               Central Bay Surface (Manta Trawl)  0.7321263
## 205               Central Bay Surface (Manta Trawl)  0.7321263
## 206               Central Bay Surface (Manta Trawl)  0.7321263
## 207               Central Bay Surface (Manta Trawl)  0.7321263
## 208               Central Bay Surface (Manta Trawl)  0.7321263
## 209               Central Bay Surface (Manta Trawl)  0.7321263
## 210               Central Bay Surface (Manta Trawl)  0.7321263
## 211               Central Bay Surface (Manta Trawl)  0.7321263
## 212               Central Bay Surface (Manta Trawl)  0.7321263
## 213               Central Bay Surface (Manta Trawl)  0.7321263
## 214               Central Bay Surface (Manta Trawl)  0.7321263
## 215 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 216 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 217 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 218 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 219 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 220 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 221 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 222 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 223 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 224 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 225 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 226 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 227 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 228 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 229           Lower South Bay Surface (Manta Trawl)  0.7321263
## 230           Lower South Bay Surface (Manta Trawl)  0.7321263
## 231           Lower South Bay Surface (Manta Trawl)  0.7321263
## 232           Lower South Bay Surface (Manta Trawl)  0.7321263
## 233           Lower South Bay Surface (Manta Trawl)  0.7321263
## 234           Lower South Bay Surface (Manta Trawl)  0.7321263
## 235 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 236 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 237 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 238 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 239 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 240 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 241 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 242 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 243 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 244 National Marine Sanctuary Surface (Manta Trawl)  0.7321263
## 245                 South Bay Surface (Manta Trawl)  0.7321263
## 246                 South Bay Surface (Manta Trawl)  0.7321263
## 247                 South Bay Surface (Manta Trawl)  0.7321263
## 248                 South Bay Surface (Manta Trawl)  0.7321263
## 249                 South Bay Surface (Manta Trawl)  0.7321263
## 250                 South Bay Surface (Manta Trawl)  0.7321263
## 251                 South Bay Surface (Manta Trawl)  0.7321263
## 252                 South Bay Surface (Manta Trawl)  0.7321263
## 253                   general Surface (Manta Trawl)  0.7321263
## 254                   general Surface (Manta Trawl)  0.7321263
## 255                   general Surface (Manta Trawl)  0.7321263
## 256                   general Surface (Manta Trawl)  0.7321263
## 257                   general Surface (Manta Trawl)  0.7321263
## 258                   general Surface (Manta Trawl)  0.7321263
## 259                   general Surface (Manta Trawl)  0.7321263
## 260                   Central Bay Surface (1L-grab)  0.6200000
## 261                   Central Bay Surface (1L-grab)  0.6200000
## 262                   Central Bay Surface (1L-grab)  0.6200000
## 263                   Central Bay Surface (1L-grab)  0.6200000
## 264                   Central Bay Surface (1L-grab)  0.6200000
## 265                   Central Bay Surface (1L-grab)  0.6200000
## 266                   Central Bay Surface (1L-grab)  0.6200000
## 267                   Central Bay Surface (1L-grab)  0.6200000
## 268                   Central Bay Surface (1L-grab)  0.6200000
## 269                   Central Bay Surface (1L-grab)  0.6200000
## 270                   Central Bay Surface (1L-grab)  0.6200000
## 271                   Central Bay Surface (1L-grab)  0.6200000
## 272     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 273     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 274     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 275     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 276     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 277     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 278     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 279     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 280     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 281               Lower South Bay Surface (1L-grab)  0.7200000
## 282               Lower South Bay Surface (1L-grab)  0.7200000
## 283               Lower South Bay Surface (1L-grab)  0.7200000
## 284               Lower South Bay Surface (1L-grab)  0.7200000
## 285     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 286     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 287     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 288     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 289     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 290     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 291     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 292     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 293     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 294     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 295     National Marine Sanctuary Surface (1L-grab)  0.3400000
## 296                     South Bay Surface (1L-grab)  0.4500000
## 297                     South Bay Surface (1L-grab)  0.4500000
## 298                     South Bay Surface (1L-grab)  0.4500000
## 299                     South Bay Surface (1L-grab)  0.4500000
## 300                     South Bay Surface (1L-grab)  0.4500000
## 301                     South Bay Surface (1L-grab)  0.4500000
## 302                     South Bay Surface (1L-grab)  0.4500000
## 303                       general Surface (1L-grab)  0.4900000
## 304                       general Surface (1L-grab)  0.4900000
## 305                       general Surface (1L-grab)  0.4900000
## 306                       general Surface (1L-grab)  0.4900000
## 307                       general Surface (1L-grab)  0.4900000
## 308                       general Surface (1L-grab)  0.4900000
##     proportion.upper95 proportion.lower95 proportion.sd proportion.n
## 1                   NA                 NA            NA           NA
## 2                   NA                 NA            NA           NA
## 3                   NA                 NA            NA           NA
## 4                   NA                 NA            NA           NA
## 5                   NA                 NA            NA           NA
## 6                   NA                 NA            NA           NA
## 7                   NA                 NA            NA           NA
## 8                   NA                 NA            NA           NA
## 9                   NA                 NA            NA           NA
## 10                  NA                 NA            NA           NA
## 11                  NA                 NA            NA           NA
## 12                  NA                 NA            NA           NA
## 13                  NA                 NA            NA           NA
## 14                  NA                 NA            NA           NA
## 15                  NA                 NA            NA           NA
## 16                  NA                 NA            NA           NA
## 17                  NA                 NA            NA           NA
## 18                  NA                 NA            NA           NA
## 19                  NA                 NA            NA           NA
## 20                  NA                 NA            NA           NA
## 21                  NA                 NA            NA           NA
## 22                  NA                 NA            NA           NA
## 23                  NA                 NA            NA           NA
## 24                  NA                 NA            NA           NA
## 25                  NA                 NA            NA           NA
## 26                  NA                 NA            NA           NA
## 27                  NA                 NA            NA           NA
## 28                  NA                 NA            NA           NA
## 29                  NA                 NA            NA           NA
## 30                  NA                 NA            NA           NA
## 31                  NA                 NA            NA           NA
## 32                  NA                 NA            NA           NA
## 33                  NA                 NA            NA           NA
## 34                  NA                 NA            NA           NA
## 35                  NA                 NA            NA           NA
## 36                  NA                 NA            NA           NA
## 37                  NA                 NA            NA           NA
## 38                  NA                 NA            NA           NA
## 39                  NA                 NA            NA           NA
## 40                  NA                 NA            NA           NA
## 41                  NA                 NA            NA           NA
## 42                  NA                 NA            NA           NA
## 43                  NA                 NA            NA           NA
## 44                  NA                 NA            NA           NA
## 45                  NA                 NA            NA           NA
## 46                  NA                 NA            NA           NA
## 47                  NA                 NA            NA           NA
## 48                  NA                 NA            NA           NA
## 49                  NA                 NA            NA           NA
## 50                  NA                 NA            NA           NA
## 51                  NA                 NA            NA           NA
## 52                  NA                 NA            NA           NA
## 53                  NA                 NA            NA           NA
## 54                  NA                 NA            NA           NA
## 55                  NA                 NA            NA           NA
## 56                  NA                 NA            NA           NA
## 57                  NA                 NA            NA           NA
## 58                  NA                 NA            NA           NA
## 59                  NA                 NA            NA           NA
## 60                  NA                 NA            NA           NA
## 61                  NA                 NA            NA           NA
## 62                  NA                 NA            NA           NA
## 63                  NA                 NA            NA           NA
## 64                  NA                 NA            NA           NA
## 65                  NA                 NA            NA           NA
## 66                  NA                 NA            NA           NA
## 67                  NA                 NA            NA           NA
## 68                  NA                 NA            NA           NA
## 69                  NA                 NA            NA           NA
## 70                  NA                 NA            NA           NA
## 71                  NA                 NA            NA           NA
## 72                  NA                 NA            NA           NA
## 73                  NA                 NA            NA           NA
## 74                  NA                 NA            NA           NA
## 75                  NA                 NA            NA           NA
## 76                  NA                 NA            NA           NA
## 77                  NA                 NA            NA           NA
## 78                  NA                 NA            NA           NA
## 79                  NA                 NA            NA           NA
## 80                  NA                 NA            NA           NA
## 81                  NA                 NA            NA           NA
## 82                  NA                 NA            NA           NA
## 83                  NA                 NA            NA           NA
## 84                  NA                 NA            NA           NA
## 85                  NA                 NA            NA           NA
## 86                  NA                 NA            NA           NA
## 87                  NA                 NA            NA           NA
## 88                  NA                 NA            NA           NA
## 89                  NA                 NA            NA           NA
## 90                  NA                 NA            NA           NA
## 91                  NA                 NA            NA           NA
## 92                  NA                 NA            NA           NA
## 93                  NA                 NA            NA           NA
## 94                  NA                 NA            NA           NA
## 95                  NA                 NA            NA           NA
## 96                  NA                 NA            NA           NA
## 97                  NA                 NA            NA           NA
## 98                  NA                 NA            NA           NA
## 99                  NA                 NA            NA           NA
## 100                 NA                 NA            NA           NA
## 101                 NA                 NA            NA           NA
## 102                 NA                 NA            NA           NA
## 103                 NA                 NA            NA           NA
## 104                 NA                 NA            NA           NA
## 105                 NA                 NA            NA           NA
## 106                 NA                 NA            NA           NA
## 107                 NA                 NA            NA           NA
## 108                 NA                 NA            NA           NA
## 109                 NA                 NA            NA           NA
## 110                 NA                 NA            NA           NA
## 111                 NA                 NA            NA           NA
## 112                 NA                 NA            NA           NA
## 113                 NA                 NA            NA           NA
## 114                 NA                 NA            NA           NA
## 115                 NA                 NA            NA           NA
## 116                 NA                 NA            NA           NA
## 117                 NA                 NA            NA           NA
## 118                 NA                 NA            NA           NA
## 119                 NA                 NA            NA           NA
## 120                 NA                 NA            NA           NA
## 121                 NA                 NA            NA           NA
## 122                 NA                 NA            NA           NA
## 123                 NA                 NA            NA           NA
## 124                 NA                 NA            NA           NA
## 125                 NA                 NA            NA           NA
## 126                 NA                 NA            NA           NA
## 127                 NA                 NA            NA           NA
## 128                 NA                 NA            NA           NA
## 129                 NA                 NA            NA           NA
## 130                 NA                 NA            NA           NA
## 131                 NA                 NA            NA           NA
## 132                 NA                 NA            NA           NA
## 133                 NA                 NA            NA           NA
## 134                 NA                 NA            NA           NA
## 135                 NA                 NA            NA           NA
## 136                 NA                 NA            NA           NA
## 137                 NA                 NA            NA           NA
## 138                 NA                 NA            NA           NA
## 139                 NA                 NA            NA           NA
## 140                 NA                 NA            NA           NA
## 141                 NA                 NA            NA           NA
## 142                 NA                 NA            NA           NA
## 143                 NA                 NA            NA           NA
## 144                 NA                 NA            NA           NA
## 145                 NA                 NA            NA           NA
## 146                 NA                 NA            NA           NA
## 147                 NA                 NA            NA           NA
## 148                 NA                 NA            NA           NA
## 149                 NA                 NA            NA           NA
## 150                 NA                 NA            NA           NA
## 151                 NA                 NA            NA           NA
## 152                 NA                 NA            NA           NA
## 153                 NA                 NA            NA           NA
## 154                 NA                 NA            NA           NA
## 155                 NA                 NA            NA           NA
## 156                 NA                 NA            NA           NA
## 157                 NA                 NA            NA           NA
## 158                 NA                 NA            NA           NA
## 159                 NA                 NA            NA           NA
## 160                 NA                 NA            NA           NA
## 161                 NA                 NA            NA           NA
## 162                 NA                 NA            NA           NA
## 163                 NA                 NA            NA           NA
## 164                 NA                 NA            NA           NA
## 165                 NA                 NA            NA           NA
## 166                 NA                 NA            NA           NA
## 167                 NA                 NA            NA           NA
## 168                 NA                 NA            NA           NA
## 169                 NA                 NA            NA           NA
## 170                 NA                 NA            NA           NA
## 171                 NA                 NA            NA           NA
## 172                 NA                 NA            NA           NA
## 173                 NA                 NA            NA           NA
## 174                 NA                 NA            NA           NA
## 175                 NA                 NA            NA           NA
## 176                 NA                 NA            NA           NA
## 177                 NA                 NA            NA           NA
## 178                 NA                 NA            NA           NA
## 179                 NA                 NA            NA           NA
## 180                 NA                 NA            NA           NA
## 181                 NA                 NA            NA           NA
## 182                 NA                 NA            NA           NA
## 183                 NA                 NA            NA           NA
## 184                 NA                 NA            NA           NA
## 185                 NA                 NA            NA           NA
## 186                 NA                 NA            NA           NA
## 187                 NA                 NA            NA           NA
## 188                 NA                 NA            NA           NA
## 189                 NA                 NA            NA           NA
## 190                 NA                 NA            NA           NA
## 191                 NA                 NA            NA           NA
## 192                 NA                 NA            NA           NA
## 193                 NA                 NA            NA           NA
## 194                 NA                 NA            NA           NA
## 195                 NA                 NA            NA           NA
## 196                 NA                 NA            NA           NA
## 197                 NA                 NA            NA           NA
## 198                 NA                 NA            NA           NA
## 199                 NA                 NA            NA           NA
## 200                 NA                 NA            NA           NA
## 201                 NA                 NA            NA           NA
## 202          0.7929707          0.6712818      0.236417           58
## 203          0.7929707          0.6712818      0.236417           58
## 204          0.7929707          0.6712818      0.236417           58
## 205          0.7929707          0.6712818      0.236417           58
## 206          0.7929707          0.6712818      0.236417           58
## 207          0.7929707          0.6712818      0.236417           58
## 208          0.7929707          0.6712818      0.236417           58
## 209          0.7929707          0.6712818      0.236417           58
## 210          0.7929707          0.6712818      0.236417           58
## 211          0.7929707          0.6712818      0.236417           58
## 212          0.7929707          0.6712818      0.236417           58
## 213          0.7929707          0.6712818      0.236417           58
## 214          0.7929707          0.6712818      0.236417           58
## 215          0.7929707          0.6712818      0.236417           58
## 216          0.7929707          0.6712818      0.236417           58
## 217          0.7929707          0.6712818      0.236417           58
## 218          0.7929707          0.6712818      0.236417           58
## 219          0.7929707          0.6712818      0.236417           58
## 220          0.7929707          0.6712818      0.236417           58
## 221          0.7929707          0.6712818      0.236417           58
## 222          0.7929707          0.6712818      0.236417           58
## 223          0.7929707          0.6712818      0.236417           58
## 224          0.7929707          0.6712818      0.236417           58
## 225          0.7929707          0.6712818      0.236417           58
## 226          0.7929707          0.6712818      0.236417           58
## 227          0.7929707          0.6712818      0.236417           58
## 228          0.7929707          0.6712818      0.236417           58
## 229          0.7929707          0.6712818      0.236417           58
## 230          0.7929707          0.6712818      0.236417           58
## 231          0.7929707          0.6712818      0.236417           58
## 232          0.7929707          0.6712818      0.236417           58
## 233          0.7929707          0.6712818      0.236417           58
## 234          0.7929707          0.6712818      0.236417           58
## 235          0.7929707          0.6712818      0.236417           58
## 236          0.7929707          0.6712818      0.236417           58
## 237          0.7929707          0.6712818      0.236417           58
## 238          0.7929707          0.6712818      0.236417           58
## 239          0.7929707          0.6712818      0.236417           58
## 240          0.7929707          0.6712818      0.236417           58
## 241          0.7929707          0.6712818      0.236417           58
## 242          0.7929707          0.6712818      0.236417           58
## 243          0.7929707          0.6712818      0.236417           58
## 244          0.7929707          0.6712818      0.236417           58
## 245          0.7929707          0.6712818      0.236417           58
## 246          0.7929707          0.6712818      0.236417           58
## 247          0.7929707          0.6712818      0.236417           58
## 248          0.7929707          0.6712818      0.236417           58
## 249          0.7929707          0.6712818      0.236417           58
## 250          0.7929707          0.6712818      0.236417           58
## 251          0.7929707          0.6712818      0.236417           58
## 252          0.7929707          0.6712818      0.236417           58
## 253          0.7929707          0.6712818      0.236417           58
## 254          0.7929707          0.6712818      0.236417           58
## 255          0.7929707          0.6712818      0.236417           58
## 256          0.7929707          0.6712818      0.236417           58
## 257          0.7929707          0.6712818      0.236417           58
## 258          0.7929707          0.6712818      0.236417           58
## 259          0.7929707          0.6712818      0.236417           58
## 260                 NA                 NA            NA           NA
## 261                 NA                 NA            NA           NA
## 262                 NA                 NA            NA           NA
## 263                 NA                 NA            NA           NA
## 264                 NA                 NA            NA           NA
## 265                 NA                 NA            NA           NA
## 266                 NA                 NA            NA           NA
## 267                 NA                 NA            NA           NA
## 268                 NA                 NA            NA           NA
## 269                 NA                 NA            NA           NA
## 270                 NA                 NA            NA           NA
## 271                 NA                 NA            NA           NA
## 272                 NA                 NA            NA           NA
## 273                 NA                 NA            NA           NA
## 274                 NA                 NA            NA           NA
## 275                 NA                 NA            NA           NA
## 276                 NA                 NA            NA           NA
## 277                 NA                 NA            NA           NA
## 278                 NA                 NA            NA           NA
## 279                 NA                 NA            NA           NA
## 280                 NA                 NA            NA           NA
## 281                 NA                 NA            NA           NA
## 282                 NA                 NA            NA           NA
## 283                 NA                 NA            NA           NA
## 284                 NA                 NA            NA           NA
## 285                 NA                 NA            NA           NA
## 286                 NA                 NA            NA           NA
## 287                 NA                 NA            NA           NA
## 288                 NA                 NA            NA           NA
## 289                 NA                 NA            NA           NA
## 290                 NA                 NA            NA           NA
## 291                 NA                 NA            NA           NA
## 292                 NA                 NA            NA           NA
## 293                 NA                 NA            NA           NA
## 294                 NA                 NA            NA           NA
## 295                 NA                 NA            NA           NA
## 296                 NA                 NA            NA           NA
## 297                 NA                 NA            NA           NA
## 298                 NA                 NA            NA           NA
## 299                 NA                 NA            NA           NA
## 300                 NA                 NA            NA           NA
## 301                 NA                 NA            NA           NA
## 302                 NA                 NA            NA           NA
## 303                 NA                 NA            NA           NA
## 304                 NA                 NA            NA           NA
## 305                 NA                 NA            NA           NA
## 306                 NA                 NA            NA           NA
## 307                 NA                 NA            NA           NA
## 308                 NA                 NA            NA           NA
##     unaligned.particle.L.master
## 1                  7.620250e-01
## 2                  7.713750e-01
## 3                  3.366000e+00
## 4                  2.632025e+00
## 5                  2.309450e+00
## 6                  3.941025e+00
## 7                  4.703050e+00
## 8                  1.079925e+00
## 9                  5.095750e-01
## 10                 8.340200e+00
## 11                 5.778300e+00
## 12                 1.141168e+01
## 13                 1.827500e-02
## 14                 3.258333e-03
## 15                 5.037667e-02
## 16                 1.192833e-02
## 17                 8.500000e-04
## 18                 1.530000e-03
## 19                 5.270000e-03
## 20                 6.601667e-03
## 21                 6.290000e-03
## 22                 2.204333e-02
## 23                 1.048333e-03
## 24                 1.558333e-03
## 25                 3.068500e-02
## 26                 4.513500e-02
## 27                 5.145333e-02
## 28                 2.125000e-03
## 29                 1.935167e-02
## 30                           NA
## 31                           NA
## 32                           NA
## 33                           NA
## 34                           NA
## 35                           NA
## 36                           NA
## 37                           NA
## 38                           NA
## 39                           NA
## 40                           NA
## 41                           NA
## 42                           NA
## 43                           NA
## 44                           NA
## 45                           NA
## 46                           NA
## 47                           NA
## 48                           NA
## 49                           NA
## 50                           NA
## 51                           NA
## 52                           NA
## 53                           NA
## 54                           NA
## 55                           NA
## 56                           NA
## 57                           NA
## 58                           NA
## 59                           NA
## 60                           NA
## 61                           NA
## 62                           NA
## 63                           NA
## 64                           NA
## 65                           NA
## 66                           NA
## 67                           NA
## 68                           NA
## 69                           NA
## 70                           NA
## 71                           NA
## 72                           NA
## 73                           NA
## 74                           NA
## 75                           NA
## 76                           NA
## 77                           NA
## 78                           NA
## 79                           NA
## 80                           NA
## 81                           NA
## 82                           NA
## 83                           NA
## 84                           NA
## 85                           NA
## 86                           NA
## 87                           NA
## 88                           NA
## 89                           NA
## 90                           NA
## 91                           NA
## 92                           NA
## 93                           NA
## 94                           NA
## 95                           NA
## 96                           NA
## 97                           NA
## 98                           NA
## 99                           NA
## 100                          NA
## 101                          NA
## 102                          NA
## 103                          NA
## 104                          NA
## 105                          NA
## 106                          NA
## 107                          NA
## 108                          NA
## 109                          NA
## 110                          NA
## 111                          NA
## 112                          NA
## 113                          NA
## 114                          NA
## 115                          NA
## 116                          NA
## 117                          NA
## 118                          NA
## 119                          NA
## 120                          NA
## 121                          NA
## 122                          NA
## 123                          NA
## 124                          NA
## 125                          NA
## 126                          NA
## 127                          NA
## 128                          NA
## 129                          NA
## 130                          NA
## 131                          NA
## 132                          NA
## 133                          NA
## 134                          NA
## 135                          NA
## 136                          NA
## 137                          NA
## 138                          NA
## 139                          NA
## 140                          NA
## 141                          NA
## 142                          NA
## 143                          NA
## 144                          NA
## 145                          NA
## 146                          NA
## 147                          NA
## 148                          NA
## 149                          NA
## 150                          NA
## 151                          NA
## 152                          NA
## 153                          NA
## 154                          NA
## 155                          NA
## 156                          NA
## 157                          NA
## 158                          NA
## 159                          NA
## 160                          NA
## 161                          NA
## 162                          NA
## 163                          NA
## 164                          NA
## 165                          NA
## 166                          NA
## 167                          NA
## 168                          NA
## 169                          NA
## 170                          NA
## 171                          NA
## 172                          NA
## 173                          NA
## 174                          NA
## 175                          NA
## 176                          NA
## 177                          NA
## 178                          NA
## 179                          NA
## 180                          NA
## 181                          NA
## 182                          NA
## 183                          NA
## 184                          NA
## 185                          NA
## 186                          NA
## 187                          NA
## 188                          NA
## 189                          NA
## 190                          NA
## 191                          NA
## 192                          NA
## 193                          NA
## 194                          NA
## 195                          NA
## 196                          NA
## 197                          NA
## 198                          NA
## 199                          NA
## 200                          NA
## 201                          NA
## 202                1.683890e-05
## 203                4.476220e-03
## 204                3.214034e-04
## 205                1.382254e-03
## 206                3.741165e-04
## 207                6.076648e-05
## 208                3.397066e-04
## 209                5.666657e-04
## 210                5.337200e-04
## 211                1.658266e-03
## 212                3.179624e-03
## 213                1.376397e-04
## 214                4.069963e-02
## 215                6.442711e-05
## 216                1.193366e-04
## 217                9.224791e-05
## 218                1.017655e-04
## 219                0.000000e+00
## 220                1.683890e-05
## 221                1.596035e-04
## 222                1.464253e-05
## 223                5.783797e-05
## 224                1.017655e-04
## 225                5.710585e-05
## 226                3.660631e-06
## 227                7.028412e-05
## 228                4.099907e-05
## 229                7.189480e-04
## 230                1.947456e-04
## 231                2.613691e-04
## 232                1.815673e-04
## 233                1.120153e-04
## 234                3.777771e-04
## 235                2.899220e-04
## 236                2.152451e-04
## 237                1.998705e-04
## 238                1.391040e-05
## 239                2.782080e-05
## 240                4.978459e-05
## 241                3.953482e-05
## 242                2.782080e-05
## 243                4.978459e-05
## 244                1.757103e-05
## 245                8.199814e-05
## 246                1.727818e-04
## 247                1.325149e-04
## 248                1.907189e-03
## 249                9.371216e-05
## 250                3.572776e-04
## 251                2.122434e-03
## 252                1.013263e-03
## 253                3.118858e-04
## 254                4.319545e-05
## 255                6.735562e-05
## 256                4.663644e-04
## 257                1.031566e-03
## 258                5.930223e-05
## 259                9.590854e-05
## 260                2.148515e+00
## 261                1.695624e+00
## 262                4.608523e+00
## 263                3.892028e-01
## 264                1.209595e+00
## 265                3.090343e+00
## 266                1.441567e+00
## 267                9.813232e-01
## 268                1.676209e+00
## 269                1.581633e+00
## 270                4.078947e+00
## 271                1.160083e+01
## 272                1.020000e+00
## 273                5.577428e-01
## 274                2.948318e+00
## 275                2.217873e-01
## 276                0.000000e+00
## 277                6.159420e-01
## 278                2.412553e-01
## 279                4.292929e-01
## 280                1.246017e+00
## 281                2.230920e+00
## 282                9.213052e-01
## 283                5.485714e+00
## 284                1.736842e+00
## 285                4.614899e+00
## 286                8.102955e-01
## 287                3.207547e-01
## 288                1.213907e+01
## 289                7.658836e-01
## 290                7.487713e-01
## 291                5.459216e-01
## 292                1.451613e+00
## 293                1.190704e+00
## 294                6.380407e+00
## 295                2.141473e+00
## 296                4.491018e-01
## 297                2.764977e+00
## 298                1.505736e+00
## 299                7.180851e-01
## 300                1.200000e+00
## 301                1.952278e+00
## 302                4.469122e+00
## 303                1.633333e+00
## 304                1.388333e+00
## 305                2.492175e+00
## 306                2.569113e+00
## 307                1.354660e+00
## 308                2.169513e+00
##     particles.fish.blank.corrected.particle.corrected
## 1                                                  NA
## 2                                                  NA
## 3                                                  NA
## 4                                                  NA
## 5                                                  NA
## 6                                                  NA
## 7                                                  NA
## 8                                                  NA
## 9                                                  NA
## 10                                                 NA
## 11                                                 NA
## 12                                                 NA
## 13                                                 NA
## 14                                                 NA
## 15                                                 NA
## 16                                                 NA
## 17                                                 NA
## 18                                                 NA
## 19                                                 NA
## 20                                                 NA
## 21                                                 NA
## 22                                                 NA
## 23                                                 NA
## 24                                                 NA
## 25                                                 NA
## 26                                                 NA
## 27                                                 NA
## 28                                                 NA
## 29                                                 NA
## 30                                           3.640500
## 31                                           0.990000
## 32                                           0.130500
## 33                                           0.150000
## 34                                           0.139500
## 35                                           0.529500
## 36                                           0.360000
## 37                                           6.760500
## 38                                           1.200000
## 39                                           1.750500
## 40                                           0.859500
## 41                                           0.880500
## 42                                           2.170500
## 43                                           0.270000
## 44                                           0.000000
## 45                                           0.000000
## 46                                           0.224900
## 47                                           0.016900
## 48                                           0.234000
## 49                                           0.130000
## 50                                           0.711100
## 51                                           0.503100
## 52                                           0.962000
## 53                                           0.780000
## 54                                           0.711100
## 55                                           0.468000
## 56                                           0.000000
## 57                                           0.260000
## 58                                           0.347100
## 59                                           0.208000
## 60                                           0.146900
## 61                                           0.208000
## 62                                           0.208000
## 63                                           0.113100
## 64                                           0.822900
## 65                                           0.016900
## 66                                           2.002000
## 67                                           1.465100
## 68                                           1.482000
## 69                                           0.425100
## 70                                           1.472900
## 71                                           0.243100
## 72                                           0.312000
## 73                                           0.130000
## 74                                           2.337300
## 75                                           1.904700
## 76                                           0.825300
## 77                                           1.862700
## 78                                           1.974000
## 79                                           0.714000
## 80                                           1.890000
## 81                                           3.444000
## 82                                           1.386000
## 83                                           0.378000
## 84                                           3.681300
## 85                                           3.626700
## 86                                           2.324700
## 87                                           5.040000
## 88                                           4.269300
## 89                                           3.051300
## 90                                           3.723300
## 91                                           2.001300
## 92                                           2.828700
## 93                                           3.066000
## 94                                           7.377300
## 95                                           4.284000
## 96                                           5.907300
## 97                                           2.757300
## 98                                           2.757300
## 99                                           1.203300
## 100                                          3.024000
## 101                                          3.164700
## 102                                          4.605300
## 103                                          1.554000
## 104                                          4.536000
## 105                                          7.434000
## 106                                          4.731300
## 107                                          1.400700
## 108                                          2.589300
## 109                                          3.962700
## 110                                          1.764000
## 111                                          0.714000
## 112                                          1.597500
## 113                                          0.129575
## 114                                          0.438425
## 115                                          1.290425
## 116                                          0.426000
## 117                                          0.296425
## 118                                          0.484575
## 119                                          0.958500
## 120                                          0.129575
## 121                                          0.296425
## 122                                          0.792000
## 123                                          0.380600
## 124                                          0.220000
## 125                                          0.367400
## 126                                          2.831400
## 127                                          0.996600
## 128                                          0.748000
## 129                                          0.820600
## 130                                          0.411400
## 131                                          1.040600
## 132                                          2.228600
## 133                                          5.968600
## 134                                          6.864000
## 135                                          7.728600
## 136                                          5.940000
## 137                                          5.280000
## 138                                         12.348600
## 139                                          3.579400
## 140                                          4.648600
## 141                                          6.188600
## 142                                          4.676700
## 143                                          1.946700
## 144                                          5.054700
## 145                                          1.554000
## 146                                          2.576700
## 147                                          1.497300
## 148                                          1.581300
## 149                                          1.652700
## 150                                          0.447300
## 151                                          0.405300
## 152                                          1.652700
## 153                                          0.321300
## 154                                          0.588000
## 155                                          1.764000
## 156                                          2.604000
## 157                                          0.812700
## 158                                          1.862700
## 159                                          1.358700
## 160                                          0.951300
## 161                                          0.602700
## 162                                          5.845075
## 163                                          2.769000
## 164                                          7.833075
## 165                                          3.100925
## 166                                          0.710000
## 167                                          1.159075
## 168                                          1.562000
## 169                                          1.822925
## 170                                          1.384500
## 171                                          0.142000
## 172                                          2.661100
## 173                                          1.732900
## 174                                          0.555100
## 175                                          0.338000
## 176                                          0.832000
## 177                                          0.841100
## 178                                          0.130000
## 179                                          0.484900
## 180                                          0.295100
## 181                                          0.728000
## 182                                                NA
## 183                                                NA
## 184                                                NA
## 185                                                NA
## 186                                                NA
## 187                                                NA
## 188                                                NA
## 189                                                NA
## 190                                                NA
## 191                                                NA
## 192                                                NA
## 193                                                NA
## 194                                                NA
## 195                                                NA
## 196                                                NA
## 197                                                NA
## 198                                                NA
## 199                                                NA
## 200                                                NA
## 201                                                NA
## 202                                                NA
## 203                                                NA
## 204                                                NA
## 205                                                NA
## 206                                                NA
## 207                                                NA
## 208                                                NA
## 209                                                NA
## 210                                                NA
## 211                                                NA
## 212                                                NA
## 213                                                NA
## 214                                                NA
## 215                                                NA
## 216                                                NA
## 217                                                NA
## 218                                                NA
## 219                                                NA
## 220                                                NA
## 221                                                NA
## 222                                                NA
## 223                                                NA
## 224                                                NA
## 225                                                NA
## 226                                                NA
## 227                                                NA
## 228                                                NA
## 229                                                NA
## 230                                                NA
## 231                                                NA
## 232                                                NA
## 233                                                NA
## 234                                                NA
## 235                                                NA
## 236                                                NA
## 237                                                NA
## 238                                                NA
## 239                                                NA
## 240                                                NA
## 241                                                NA
## 242                                                NA
## 243                                                NA
## 244                                                NA
## 245                                                NA
## 246                                                NA
## 247                                                NA
## 248                                                NA
## 249                                                NA
## 250                                                NA
## 251                                                NA
## 252                                                NA
## 253                                                NA
## 254                                                NA
## 255                                                NA
## 256                                                NA
## 257                                                NA
## 258                                                NA
## 259                                                NA
## 260                                                NA
## 261                                                NA
## 262                                                NA
## 263                                                NA
## 264                                                NA
## 265                                                NA
## 266                                                NA
## 267                                                NA
## 268                                                NA
## 269                                                NA
## 270                                                NA
## 271                                                NA
## 272                                                NA
## 273                                                NA
## 274                                                NA
## 275                                                NA
## 276                                                NA
## 277                                                NA
## 278                                                NA
## 279                                                NA
## 280                                                NA
## 281                                                NA
## 282                                                NA
## 283                                                NA
## 284                                                NA
## 285                                                NA
## 286                                                NA
## 287                                                NA
## 288                                                NA
## 289                                                NA
## 290                                                NA
## 291                                                NA
## 292                                                NA
## 293                                                NA
## 294                                                NA
## 295                                                NA
## 296                                                NA
## 297                                                NA
## 298                                                NA
## 299                                                NA
## 300                                                NA
## 301                                                NA
## 302                                                NA
## 303                                                NA
## 304                                                NA
## 305                                                NA
## 306                                                NA
## 307                                                NA
## 308                                                NA
##     particles.kg.blank.corrected.particle.corrected
## 1                                                NA
## 2                                                NA
## 3                                                NA
## 4                                                NA
## 5                                                NA
## 6                                                NA
## 7                                                NA
## 8                                                NA
## 9                                                NA
## 10                                               NA
## 11                                               NA
## 12                                               NA
## 13                                               NA
## 14                                               NA
## 15                                               NA
## 16                                               NA
## 17                                               NA
## 18                                               NA
## 19                                               NA
## 20                                               NA
## 21                                               NA
## 22                                               NA
## 23                                               NA
## 24                                               NA
## 25                                               NA
## 26                                               NA
## 27                                               NA
## 28                                               NA
## 29                                               NA
## 30                                               NA
## 31                                               NA
## 32                                               NA
## 33                                               NA
## 34                                               NA
## 35                                               NA
## 36                                               NA
## 37                                               NA
## 38                                               NA
## 39                                               NA
## 40                                               NA
## 41                                               NA
## 42                                               NA
## 43                                               NA
## 44                                               NA
## 45                                               NA
## 46                                               NA
## 47                                               NA
## 48                                               NA
## 49                                               NA
## 50                                               NA
## 51                                               NA
## 52                                               NA
## 53                                               NA
## 54                                               NA
## 55                                               NA
## 56                                               NA
## 57                                               NA
## 58                                               NA
## 59                                               NA
## 60                                               NA
## 61                                               NA
## 62                                               NA
## 63                                               NA
## 64                                               NA
## 65                                               NA
## 66                                               NA
## 67                                               NA
## 68                                               NA
## 69                                               NA
## 70                                               NA
## 71                                               NA
## 72                                               NA
## 73                                               NA
## 74                                               NA
## 75                                               NA
## 76                                               NA
## 77                                               NA
## 78                                               NA
## 79                                               NA
## 80                                               NA
## 81                                               NA
## 82                                               NA
## 83                                               NA
## 84                                               NA
## 85                                               NA
## 86                                               NA
## 87                                               NA
## 88                                               NA
## 89                                               NA
## 90                                               NA
## 91                                               NA
## 92                                               NA
## 93                                               NA
## 94                                               NA
## 95                                               NA
## 96                                               NA
## 97                                               NA
## 98                                               NA
## 99                                               NA
## 100                                              NA
## 101                                              NA
## 102                                              NA
## 103                                              NA
## 104                                              NA
## 105                                              NA
## 106                                              NA
## 107                                              NA
## 108                                              NA
## 109                                              NA
## 110                                              NA
## 111                                              NA
## 112                                              NA
## 113                                              NA
## 114                                              NA
## 115                                              NA
## 116                                              NA
## 117                                              NA
## 118                                              NA
## 119                                              NA
## 120                                              NA
## 121                                              NA
## 122                                              NA
## 123                                              NA
## 124                                              NA
## 125                                              NA
## 126                                              NA
## 127                                              NA
## 128                                              NA
## 129                                              NA
## 130                                              NA
## 131                                              NA
## 132                                              NA
## 133                                              NA
## 134                                              NA
## 135                                              NA
## 136                                              NA
## 137                                              NA
## 138                                              NA
## 139                                              NA
## 140                                              NA
## 141                                              NA
## 142                                              NA
## 143                                              NA
## 144                                              NA
## 145                                              NA
## 146                                              NA
## 147                                              NA
## 148                                              NA
## 149                                              NA
## 150                                              NA
## 151                                              NA
## 152                                              NA
## 153                                              NA
## 154                                              NA
## 155                                              NA
## 156                                              NA
## 157                                              NA
## 158                                              NA
## 159                                              NA
## 160                                              NA
## 161                                              NA
## 162                                              NA
## 163                                              NA
## 164                                              NA
## 165                                              NA
## 166                                              NA
## 167                                              NA
## 168                                              NA
## 169                                              NA
## 170                                              NA
## 171                                              NA
## 172                                              NA
## 173                                              NA
## 174                                              NA
## 175                                              NA
## 176                                              NA
## 177                                              NA
## 178                                              NA
## 179                                              NA
## 180                                              NA
## 181                                              NA
## 182                                        161.7128
## 183                                        501.8420
## 184                                        708.8136
## 185                                       5322.0992
## 186                                       1201.5036
## 187                                      21052.0850
## 188                                       1823.6300
## 189                                       3554.3500
## 190                                       1099.6478
## 191                                        325.9776
## 192                                         10.4013
## 193                                        122.1987
## 194                                       3522.9154
## 195                                       2677.2710
## 196                                        215.7564
## 197                                        390.6666
## 198                                         95.0000
## 199                                         49.7876
## 200                                         18.0126
## 201                                         38.9484
## 202                                              NA
## 203                                              NA
## 204                                              NA
## 205                                              NA
## 206                                              NA
## 207                                              NA
## 208                                              NA
## 209                                              NA
## 210                                              NA
## 211                                              NA
## 212                                              NA
## 213                                              NA
## 214                                              NA
## 215                                              NA
## 216                                              NA
## 217                                              NA
## 218                                              NA
## 219                                              NA
## 220                                              NA
## 221                                              NA
## 222                                              NA
## 223                                              NA
## 224                                              NA
## 225                                              NA
## 226                                              NA
## 227                                              NA
## 228                                              NA
## 229                                              NA
## 230                                              NA
## 231                                              NA
## 232                                              NA
## 233                                              NA
## 234                                              NA
## 235                                              NA
## 236                                              NA
## 237                                              NA
## 238                                              NA
## 239                                              NA
## 240                                              NA
## 241                                              NA
## 242                                              NA
## 243                                              NA
## 244                                              NA
## 245                                              NA
## 246                                              NA
## 247                                              NA
## 248                                              NA
## 249                                              NA
## 250                                              NA
## 251                                              NA
## 252                                              NA
## 253                                              NA
## 254                                              NA
## 255                                              NA
## 256                                              NA
## 257                                              NA
## 258                                              NA
## 259                                              NA
## 260                                              NA
## 261                                              NA
## 262                                              NA
## 263                                              NA
## 264                                              NA
## 265                                              NA
## 266                                              NA
## 267                                              NA
## 268                                              NA
## 269                                              NA
## 270                                              NA
## 271                                              NA
## 272                                              NA
## 273                                              NA
## 274                                              NA
## 275                                              NA
## 276                                              NA
## 277                                              NA
## 278                                              NA
## 279                                              NA
## 280                                              NA
## 281                                              NA
## 282                                              NA
## 283                                              NA
## 284                                              NA
## 285                                              NA
## 286                                              NA
## 287                                              NA
## 288                                              NA
## 289                                              NA
## 290                                              NA
## 291                                              NA
## 292                                              NA
## 293                                              NA
## 294                                              NA
## 295                                              NA
## 296                                              NA
## 297                                              NA
## 298                                              NA
## 299                                              NA
## 300                                              NA
## 301                                              NA
## 302                                              NA
## 303                                              NA
## 304                                              NA
## 305                                              NA
## 306                                              NA
## 307                                              NA
## 308                                              NA
##     particles.L.blank.corrected.particle.corrected.upper95
## 1                                                       NA
## 2                                                       NA
## 3                                                       NA
## 4                                                       NA
## 5                                                       NA
## 6                                                       NA
## 7                                                       NA
## 8                                                       NA
## 9                                                       NA
## 10                                                      NA
## 11                                                      NA
## 12                                                      NA
## 13                                                      NA
## 14                                                      NA
## 15                                                      NA
## 16                                                      NA
## 17                                                      NA
## 18                                                      NA
## 19                                                      NA
## 20                                                      NA
## 21                                                      NA
## 22                                                      NA
## 23                                                      NA
## 24                                                      NA
## 25                                                      NA
## 26                                                      NA
## 27                                                      NA
## 28                                                      NA
## 29                                                      NA
## 30                                                      NA
## 31                                                      NA
## 32                                                      NA
## 33                                                      NA
## 34                                                      NA
## 35                                                      NA
## 36                                                      NA
## 37                                                      NA
## 38                                                      NA
## 39                                                      NA
## 40                                                      NA
## 41                                                      NA
## 42                                                      NA
## 43                                                      NA
## 44                                                      NA
## 45                                                      NA
## 46                                                      NA
## 47                                                      NA
## 48                                                      NA
## 49                                                      NA
## 50                                                      NA
## 51                                                      NA
## 52                                                      NA
## 53                                                      NA
## 54                                                      NA
## 55                                                      NA
## 56                                                      NA
## 57                                                      NA
## 58                                                      NA
## 59                                                      NA
## 60                                                      NA
## 61                                                      NA
## 62                                                      NA
## 63                                                      NA
## 64                                                      NA
## 65                                                      NA
## 66                                                      NA
## 67                                                      NA
## 68                                                      NA
## 69                                                      NA
## 70                                                      NA
## 71                                                      NA
## 72                                                      NA
## 73                                                      NA
## 74                                                      NA
## 75                                                      NA
## 76                                                      NA
## 77                                                      NA
## 78                                                      NA
## 79                                                      NA
## 80                                                      NA
## 81                                                      NA
## 82                                                      NA
## 83                                                      NA
## 84                                                      NA
## 85                                                      NA
## 86                                                      NA
## 87                                                      NA
## 88                                                      NA
## 89                                                      NA
## 90                                                      NA
## 91                                                      NA
## 92                                                      NA
## 93                                                      NA
## 94                                                      NA
## 95                                                      NA
## 96                                                      NA
## 97                                                      NA
## 98                                                      NA
## 99                                                      NA
## 100                                                     NA
## 101                                                     NA
## 102                                                     NA
## 103                                                     NA
## 104                                                     NA
## 105                                                     NA
## 106                                                     NA
## 107                                                     NA
## 108                                                     NA
## 109                                                     NA
## 110                                                     NA
## 111                                                     NA
## 112                                                     NA
## 113                                                     NA
## 114                                                     NA
## 115                                                     NA
## 116                                                     NA
## 117                                                     NA
## 118                                                     NA
## 119                                                     NA
## 120                                                     NA
## 121                                                     NA
## 122                                                     NA
## 123                                                     NA
## 124                                                     NA
## 125                                                     NA
## 126                                                     NA
## 127                                                     NA
## 128                                                     NA
## 129                                                     NA
## 130                                                     NA
## 131                                                     NA
## 132                                                     NA
## 133                                                     NA
## 134                                                     NA
## 135                                                     NA
## 136                                                     NA
## 137                                                     NA
## 138                                                     NA
## 139                                                     NA
## 140                                                     NA
## 141                                                     NA
## 142                                                     NA
## 143                                                     NA
## 144                                                     NA
## 145                                                     NA
## 146                                                     NA
## 147                                                     NA
## 148                                                     NA
## 149                                                     NA
## 150                                                     NA
## 151                                                     NA
## 152                                                     NA
## 153                                                     NA
## 154                                                     NA
## 155                                                     NA
## 156                                                     NA
## 157                                                     NA
## 158                                                     NA
## 159                                                     NA
## 160                                                     NA
## 161                                                     NA
## 162                                                     NA
## 163                                                     NA
## 164                                                     NA
## 165                                                     NA
## 166                                                     NA
## 167                                                     NA
## 168                                                     NA
## 169                                                     NA
## 170                                                     NA
## 171                                                     NA
## 172                                                     NA
## 173                                                     NA
## 174                                                     NA
## 175                                                     NA
## 176                                                     NA
## 177                                                     NA
## 178                                                     NA
## 179                                                     NA
## 180                                                     NA
## 181                                                     NA
## 182                                                     NA
## 183                                                     NA
## 184                                                     NA
## 185                                                     NA
## 186                                                     NA
## 187                                                     NA
## 188                                                     NA
## 189                                                     NA
## 190                                                     NA
## 191                                                     NA
## 192                                                     NA
## 193                                                     NA
## 194                                                     NA
## 195                                                     NA
## 196                                                     NA
## 197                                                     NA
## 198                                                     NA
## 199                                                     NA
## 200                                                     NA
## 201                                                     NA
## 202                                           1.823833e-05
## 203                                           4.848223e-03
## 204                                           3.481141e-04
## 205                                           1.497129e-03
## 206                                           4.052080e-04
## 207                                           6.581657e-05
## 208                                           3.679384e-04
## 209                                           6.137593e-04
## 210                                           5.780756e-04
## 211                                           1.796079e-03
## 212                                           3.443872e-03
## 213                                           1.490785e-04
## 214                                           4.408203e-02
## 215                                           6.978142e-05
## 216                                           1.292542e-04
## 217                                           9.991431e-05
## 218                                           1.102229e-04
## 219                                           0.000000e+00
## 220                                           1.823833e-05
## 221                                           1.728676e-04
## 222                                           1.585941e-05
## 223                                           6.264468e-05
## 224                                           1.102229e-04
## 225                                           6.185171e-05
## 226                                           3.964853e-06
## 227                                           7.612519e-05
## 228                                           4.440636e-05
## 229                                           7.786972e-04
## 230                                           2.109302e-04
## 231                                           2.830905e-04
## 232                                           1.966567e-04
## 233                                           1.213245e-04
## 234                                           4.091729e-04
## 235                                           3.140164e-04
## 236                                           2.331334e-04
## 237                                           2.164810e-04
## 238                                           1.506644e-05
## 239                                           3.013289e-05
## 240                                           5.392201e-05
## 241                                           4.282042e-05
## 242                                           3.013289e-05
## 243                                           5.392201e-05
## 244                                           1.903130e-05
## 245                                           8.881272e-05
## 246                                           1.871411e-04
## 247                                           1.435277e-04
## 248                                           2.065689e-03
## 249                                           1.015002e-04
## 250                                           3.869697e-04
## 251                                           2.298822e-03
## 252                                           1.097471e-03
## 253                                           3.378055e-04
## 254                                           4.678527e-05
## 255                                           7.295330e-05
## 256                                           5.051223e-04
## 257                                           1.117296e-03
## 258                                           6.423063e-05
## 259                                           1.038792e-04
## 260                                                     NA
## 261                                                     NA
## 262                                                     NA
## 263                                                     NA
## 264                                                     NA
## 265                                                     NA
## 266                                                     NA
## 267                                                     NA
## 268                                                     NA
## 269                                                     NA
## 270                                                     NA
## 271                                                     NA
## 272                                                     NA
## 273                                                     NA
## 274                                                     NA
## 275                                                     NA
## 276                                                     NA
## 277                                                     NA
## 278                                                     NA
## 279                                                     NA
## 280                                                     NA
## 281                                                     NA
## 282                                                     NA
## 283                                                     NA
## 284                                                     NA
## 285                                                     NA
## 286                                                     NA
## 287                                                     NA
## 288                                                     NA
## 289                                                     NA
## 290                                                     NA
## 291                                                     NA
## 292                                                     NA
## 293                                                     NA
## 294                                                     NA
## 295                                                     NA
## 296                                                     NA
## 297                                                     NA
## 298                                                     NA
## 299                                                     NA
## 300                                                     NA
## 301                                                     NA
## 302                                                     NA
## 303                                                     NA
## 304                                                     NA
## 305                                                     NA
## 306                                                     NA
## 307                                                     NA
## 308                                                     NA
##     particles.L.blank.corrected.particle.corrected.lower95
## 1                                                       NA
## 2                                                       NA
## 3                                                       NA
## 4                                                       NA
## 5                                                       NA
## 6                                                       NA
## 7                                                       NA
## 8                                                       NA
## 9                                                       NA
## 10                                                      NA
## 11                                                      NA
## 12                                                      NA
## 13                                                      NA
## 14                                                      NA
## 15                                                      NA
## 16                                                      NA
## 17                                                      NA
## 18                                                      NA
## 19                                                      NA
## 20                                                      NA
## 21                                                      NA
## 22                                                      NA
## 23                                                      NA
## 24                                                      NA
## 25                                                      NA
## 26                                                      NA
## 27                                                      NA
## 28                                                      NA
## 29                                                      NA
## 30                                                      NA
## 31                                                      NA
## 32                                                      NA
## 33                                                      NA
## 34                                                      NA
## 35                                                      NA
## 36                                                      NA
## 37                                                      NA
## 38                                                      NA
## 39                                                      NA
## 40                                                      NA
## 41                                                      NA
## 42                                                      NA
## 43                                                      NA
## 44                                                      NA
## 45                                                      NA
## 46                                                      NA
## 47                                                      NA
## 48                                                      NA
## 49                                                      NA
## 50                                                      NA
## 51                                                      NA
## 52                                                      NA
## 53                                                      NA
## 54                                                      NA
## 55                                                      NA
## 56                                                      NA
## 57                                                      NA
## 58                                                      NA
## 59                                                      NA
## 60                                                      NA
## 61                                                      NA
## 62                                                      NA
## 63                                                      NA
## 64                                                      NA
## 65                                                      NA
## 66                                                      NA
## 67                                                      NA
## 68                                                      NA
## 69                                                      NA
## 70                                                      NA
## 71                                                      NA
## 72                                                      NA
## 73                                                      NA
## 74                                                      NA
## 75                                                      NA
## 76                                                      NA
## 77                                                      NA
## 78                                                      NA
## 79                                                      NA
## 80                                                      NA
## 81                                                      NA
## 82                                                      NA
## 83                                                      NA
## 84                                                      NA
## 85                                                      NA
## 86                                                      NA
## 87                                                      NA
## 88                                                      NA
## 89                                                      NA
## 90                                                      NA
## 91                                                      NA
## 92                                                      NA
## 93                                                      NA
## 94                                                      NA
## 95                                                      NA
## 96                                                      NA
## 97                                                      NA
## 98                                                      NA
## 99                                                      NA
## 100                                                     NA
## 101                                                     NA
## 102                                                     NA
## 103                                                     NA
## 104                                                     NA
## 105                                                     NA
## 106                                                     NA
## 107                                                     NA
## 108                                                     NA
## 109                                                     NA
## 110                                                     NA
## 111                                                     NA
## 112                                                     NA
## 113                                                     NA
## 114                                                     NA
## 115                                                     NA
## 116                                                     NA
## 117                                                     NA
## 118                                                     NA
## 119                                                     NA
## 120                                                     NA
## 121                                                     NA
## 122                                                     NA
## 123                                                     NA
## 124                                                     NA
## 125                                                     NA
## 126                                                     NA
## 127                                                     NA
## 128                                                     NA
## 129                                                     NA
## 130                                                     NA
## 131                                                     NA
## 132                                                     NA
## 133                                                     NA
## 134                                                     NA
## 135                                                     NA
## 136                                                     NA
## 137                                                     NA
## 138                                                     NA
## 139                                                     NA
## 140                                                     NA
## 141                                                     NA
## 142                                                     NA
## 143                                                     NA
## 144                                                     NA
## 145                                                     NA
## 146                                                     NA
## 147                                                     NA
## 148                                                     NA
## 149                                                     NA
## 150                                                     NA
## 151                                                     NA
## 152                                                     NA
## 153                                                     NA
## 154                                                     NA
## 155                                                     NA
## 156                                                     NA
## 157                                                     NA
## 158                                                     NA
## 159                                                     NA
## 160                                                     NA
## 161                                                     NA
## 162                                                     NA
## 163                                                     NA
## 164                                                     NA
## 165                                                     NA
## 166                                                     NA
## 167                                                     NA
## 168                                                     NA
## 169                                                     NA
## 170                                                     NA
## 171                                                     NA
## 172                                                     NA
## 173                                                     NA
## 174                                                     NA
## 175                                                     NA
## 176                                                     NA
## 177                                                     NA
## 178                                                     NA
## 179                                                     NA
## 180                                                     NA
## 181                                                     NA
## 182                                                     NA
## 183                                                     NA
## 184                                                     NA
## 185                                                     NA
## 186                                                     NA
## 187                                                     NA
## 188                                                     NA
## 189                                                     NA
## 190                                                     NA
## 191                                                     NA
## 192                                                     NA
## 193                                                     NA
## 194                                                     NA
## 195                                                     NA
## 196                                                     NA
## 197                                                     NA
## 198                                                     NA
## 199                                                     NA
## 200                                                     NA
## 201                                                     NA
## 202                                           1.543948e-05
## 203                                           4.104217e-03
## 204                                           2.946927e-04
## 205                                           1.267380e-03
## 206                                           3.430250e-04
## 207                                           5.571639e-05
## 208                                           3.114748e-04
## 209                                           5.195721e-04
## 210                                           4.893644e-04
## 211                                           1.520453e-03
## 212                                           2.915377e-03
## 213                                           1.262010e-04
## 214                                           3.731723e-02
## 215                                           5.907280e-05
## 216                                           1.094189e-04
## 217                                           8.458151e-05
## 218                                           9.330817e-05
## 219                                           0.000000e+00
## 220                                           1.543948e-05
## 221                                           1.463394e-04
## 222                                           1.342564e-05
## 223                                           5.303126e-05
## 224                                           9.330817e-05
## 225                                           5.235998e-05
## 226                                           3.356409e-06
## 227                                           6.444305e-05
## 228                                           3.759178e-05
## 229                                           6.591987e-04
## 230                                           1.785610e-04
## 231                                           2.396476e-04
## 232                                           1.664779e-04
## 233                                           1.027061e-04
## 234                                           3.463814e-04
## 235                                           2.658276e-04
## 236                                           1.973569e-04
## 237                                           1.832599e-04
## 238                                           1.275435e-05
## 239                                           2.550871e-05
## 240                                           4.564716e-05
## 241                                           3.624922e-05
## 242                                           2.550871e-05
## 243                                           4.564716e-05
## 244                                           1.611076e-05
## 245                                           7.518356e-05
## 246                                           1.584225e-04
## 247                                           1.215020e-04
## 248                                           1.748689e-03
## 249                                           8.592407e-05
## 250                                           3.275855e-04
## 251                                           1.946046e-03
## 252                                           9.290540e-04
## 253                                           2.859661e-04
## 254                                           3.960563e-05
## 255                                           6.175793e-05
## 256                                           4.276065e-04
## 257                                           9.458361e-04
## 258                                           5.437383e-05
## 259                                           8.793792e-05
## 260                                                     NA
## 261                                                     NA
## 262                                                     NA
## 263                                                     NA
## 264                                                     NA
## 265                                                     NA
## 266                                                     NA
## 267                                                     NA
## 268                                                     NA
## 269                                                     NA
## 270                                                     NA
## 271                                                     NA
## 272                                                     NA
## 273                                                     NA
## 274                                                     NA
## 275                                                     NA
## 276                                                     NA
## 277                                                     NA
## 278                                                     NA
## 279                                                     NA
## 280                                                     NA
## 281                                                     NA
## 282                                                     NA
## 283                                                     NA
## 284                                                     NA
## 285                                                     NA
## 286                                                     NA
## 287                                                     NA
## 288                                                     NA
## 289                                                     NA
## 290                                                     NA
## 291                                                     NA
## 292                                                     NA
## 293                                                     NA
## 294                                                     NA
## 295                                                     NA
## 296                                                     NA
## 297                                                     NA
## 298                                                     NA
## 299                                                     NA
## 300                                                     NA
## 301                                                     NA
## 302                                                     NA
## 303                                                     NA
## 304                                                     NA
## 305                                                     NA
## 306                                                     NA
## 307                                                     NA
## 308                                                     NA
##     particles.L.blank.corrected.particle.corrected.sd
## 1                                                  NA
## 2                                                  NA
## 3                                                  NA
## 4                                                  NA
## 5                                                  NA
## 6                                                  NA
## 7                                                  NA
## 8                                                  NA
## 9                                                  NA
## 10                                                 NA
## 11                                                 NA
## 12                                                 NA
## 13                                                 NA
## 14                                                 NA
## 15                                                 NA
## 16                                                 NA
## 17                                                 NA
## 18                                                 NA
## 19                                                 NA
## 20                                                 NA
## 21                                                 NA
## 22                                                 NA
## 23                                                 NA
## 24                                                 NA
## 25                                                 NA
## 26                                                 NA
## 27                                                 NA
## 28                                                 NA
## 29                                                 NA
## 30                                                 NA
## 31                                                 NA
## 32                                                 NA
## 33                                                 NA
## 34                                                 NA
## 35                                                 NA
## 36                                                 NA
## 37                                                 NA
## 38                                                 NA
## 39                                                 NA
## 40                                                 NA
## 41                                                 NA
## 42                                                 NA
## 43                                                 NA
## 44                                                 NA
## 45                                                 NA
## 46                                                 NA
## 47                                                 NA
## 48                                                 NA
## 49                                                 NA
## 50                                                 NA
## 51                                                 NA
## 52                                                 NA
## 53                                                 NA
## 54                                                 NA
## 55                                                 NA
## 56                                                 NA
## 57                                                 NA
## 58                                                 NA
## 59                                                 NA
## 60                                                 NA
## 61                                                 NA
## 62                                                 NA
## 63                                                 NA
## 64                                                 NA
## 65                                                 NA
## 66                                                 NA
## 67                                                 NA
## 68                                                 NA
## 69                                                 NA
## 70                                                 NA
## 71                                                 NA
## 72                                                 NA
## 73                                                 NA
## 74                                                 NA
## 75                                                 NA
## 76                                                 NA
## 77                                                 NA
## 78                                                 NA
## 79                                                 NA
## 80                                                 NA
## 81                                                 NA
## 82                                                 NA
## 83                                                 NA
## 84                                                 NA
## 85                                                 NA
## 86                                                 NA
## 87                                                 NA
## 88                                                 NA
## 89                                                 NA
## 90                                                 NA
## 91                                                 NA
## 92                                                 NA
## 93                                                 NA
## 94                                                 NA
## 95                                                 NA
## 96                                                 NA
## 97                                                 NA
## 98                                                 NA
## 99                                                 NA
## 100                                                NA
## 101                                                NA
## 102                                                NA
## 103                                                NA
## 104                                                NA
## 105                                                NA
## 106                                                NA
## 107                                                NA
## 108                                                NA
## 109                                                NA
## 110                                                NA
## 111                                                NA
## 112                                                NA
## 113                                                NA
## 114                                                NA
## 115                                                NA
## 116                                                NA
## 117                                                NA
## 118                                                NA
## 119                                                NA
## 120                                                NA
## 121                                                NA
## 122                                                NA
## 123                                                NA
## 124                                                NA
## 125                                                NA
## 126                                                NA
## 127                                                NA
## 128                                                NA
## 129                                                NA
## 130                                                NA
## 131                                                NA
## 132                                                NA
## 133                                                NA
## 134                                                NA
## 135                                                NA
## 136                                                NA
## 137                                                NA
## 138                                                NA
## 139                                                NA
## 140                                                NA
## 141                                                NA
## 142                                                NA
## 143                                                NA
## 144                                                NA
## 145                                                NA
## 146                                                NA
## 147                                                NA
## 148                                                NA
## 149                                                NA
## 150                                                NA
## 151                                                NA
## 152                                                NA
## 153                                                NA
## 154                                                NA
## 155                                                NA
## 156                                                NA
## 157                                                NA
## 158                                                NA
## 159                                                NA
## 160                                                NA
## 161                                                NA
## 162                                                NA
## 163                                                NA
## 164                                                NA
## 165                                                NA
## 166                                                NA
## 167                                                NA
## 168                                                NA
## 169                                                NA
## 170                                                NA
## 171                                                NA
## 172                                                NA
## 173                                                NA
## 174                                                NA
## 175                                                NA
## 176                                                NA
## 177                                                NA
## 178                                                NA
## 179                                                NA
## 180                                                NA
## 181                                                NA
## 182                                                NA
## 183                                                NA
## 184                                                NA
## 185                                                NA
## 186                                                NA
## 187                                                NA
## 188                                                NA
## 189                                                NA
## 190                                                NA
## 191                                                NA
## 192                                                NA
## 193                                                NA
## 194                                                NA
## 195                                                NA
## 196                                                NA
## 197                                                NA
## 198                                                NA
## 199                                                NA
## 200                                                NA
## 201                                                NA
## 202                                      5.437592e-06
## 203                                      1.445454e-03
## 204                                      1.037871e-04
## 205                                      4.463554e-04
## 206                                      1.208091e-04
## 207                                      1.962261e-05
## 208                                      1.096975e-04
## 209                                      1.829868e-04
## 210                                      1.723480e-04
## 211                                      5.354846e-04
## 212                                      1.026759e-03
## 213                                      4.444640e-05
## 214                                      1.314266e-02
## 215                                      2.080470e-05
## 216                                      3.853598e-05
## 217                                      2.978855e-05
## 218                                      3.286197e-05
## 219                                      0.000000e+00
## 220                                      5.437592e-06
## 221                                      5.153892e-05
## 222                                      4.728341e-06
## 223                                      1.867695e-05
## 224                                      3.286197e-05
## 225                                      1.844053e-05
## 226                                      1.182085e-06
## 227                                      2.269604e-05
## 228                                      1.323935e-05
## 229                                      2.321615e-04
## 230                                      6.288693e-05
## 231                                      8.440088e-05
## 232                                      5.863143e-05
## 233                                      3.617181e-05
## 234                                      1.219912e-04
## 235                                      9.362115e-05
## 236                                      6.950661e-05
## 237                                      6.454185e-05
## 238                                      4.491924e-06
## 239                                      8.983848e-06
## 240                                      1.607636e-05
## 241                                      1.276652e-05
## 242                                      8.983848e-06
## 243                                      1.607636e-05
## 244                                      5.674009e-06
## 245                                      2.647871e-05
## 246                                      5.579442e-05
## 247                                      4.279148e-05
## 248                                      6.158664e-04
## 249                                      3.026138e-05
## 250                                      1.153715e-04
## 251                                      6.853730e-04
## 252                                      3.272012e-04
## 253                                      1.007137e-04
## 254                                      1.394861e-05
## 255                                      2.175037e-05
## 256                                      1.505977e-04
## 257                                      3.331116e-04
## 258                                      1.914978e-05
## 259                                      3.097063e-05
## 260                                                NA
## 261                                                NA
## 262                                                NA
## 263                                                NA
## 264                                                NA
## 265                                                NA
## 266                                                NA
## 267                                                NA
## 268                                                NA
## 269                                                NA
## 270                                                NA
## 271                                                NA
## 272                                                NA
## 273                                                NA
## 274                                                NA
## 275                                                NA
## 276                                                NA
## 277                                                NA
## 278                                                NA
## 279                                                NA
## 280                                                NA
## 281                                                NA
## 282                                                NA
## 283                                                NA
## 284                                                NA
## 285                                                NA
## 286                                                NA
## 287                                                NA
## 288                                                NA
## 289                                                NA
## 290                                                NA
## 291                                                NA
## 292                                                NA
## 293                                                NA
## 294                                                NA
## 295                                                NA
## 296                                                NA
## 297                                                NA
## 298                                                NA
## 299                                                NA
## 300                                                NA
## 301                                                NA
## 302                                                NA
## 303                                                NA
## 304                                                NA
## 305                                                NA
## 306                                                NA
## 307                                                NA
## 308                                                NA
##     particles.L.blank.corrected.particle.corrected.fiber.corrected        CF
## 1                                                     3.504095e+00  59.87151
## 2                                                     3.547090e+00  59.87151
## 3                                                     1.547821e+01  59.87151
## 4                                                     1.210310e+01  59.87151
## 5                                                     1.061977e+01  59.87151
## 6                                                     1.812241e+01  59.87151
## 7                                                     2.162650e+01  59.87151
## 8                                                     4.965926e+00  59.87151
## 9                                                     2.343229e+00  59.87151
## 10                                                    3.835157e+01  59.87151
## 11                                                    2.657093e+01  59.87151
## 12                                                    5.247544e+01  59.87151
## 13                                                    8.403574e-02  17.02770
## 14                                                    1.498312e-02  17.02770
## 15                                                    2.316520e-01  17.02770
## 16                                                    5.485124e-02  17.02770
## 17                                                    3.908639e-03  17.02770
## 18                                                    7.035551e-03  17.02770
## 19                                                    2.423356e-02  17.02770
## 20                                                    3.035710e-02  17.02770
## 21                                                    2.892393e-02  17.02770
## 22                                                    1.013640e-01  17.02770
## 23                                                    4.820655e-03  17.02770
## 24                                                    7.165839e-03  17.02770
## 25                                                    1.411019e-01  17.02770
## 26                                                    2.075487e-01  17.02770
## 27                                                    2.366030e-01  17.02770
## 28                                                    9.771598e-03  17.02770
## 29                                                    8.898669e-02  17.02770
## 30                                                              NA  11.37543
## 31                                                              NA  11.37543
## 32                                                              NA  11.37543
## 33                                                              NA  11.37543
## 34                                                              NA  11.37543
## 35                                                              NA  11.37543
## 36                                                              NA  11.37543
## 37                                                              NA  11.37543
## 38                                                              NA  11.37543
## 39                                                              NA  11.37543
## 40                                                              NA  11.37543
## 41                                                              NA  11.37543
## 42                                                              NA  11.37543
## 43                                                              NA  11.37543
## 44                                                              NA  11.37543
## 45                                                              NA  11.37543
## 46                                                              NA  11.37543
## 47                                                              NA  11.37543
## 48                                                              NA  11.37543
## 49                                                              NA  11.37543
## 50                                                              NA  11.37543
## 51                                                              NA  11.37543
## 52                                                              NA  11.37543
## 53                                                              NA  11.37543
## 54                                                              NA  11.37543
## 55                                                              NA  11.37543
## 56                                                              NA  11.37543
## 57                                                              NA  11.37543
## 58                                                              NA  11.37543
## 59                                                              NA  11.37543
## 60                                                              NA  11.37543
## 61                                                              NA  11.37543
## 62                                                              NA  11.37543
## 63                                                              NA  11.37543
## 64                                                              NA  11.37543
## 65                                                              NA  11.37543
## 66                                                              NA  11.37543
## 67                                                              NA  11.37543
## 68                                                              NA  11.37543
## 69                                                              NA  11.37543
## 70                                                              NA  11.37543
## 71                                                              NA  11.37543
## 72                                                              NA  11.37543
## 73                                                              NA  11.37543
## 74                                                              NA  11.37543
## 75                                                              NA  11.37543
## 76                                                              NA  11.37543
## 77                                                              NA  11.37543
## 78                                                              NA  11.37543
## 79                                                              NA  11.37543
## 80                                                              NA  11.37543
## 81                                                              NA  11.37543
## 82                                                              NA  11.37543
## 83                                                              NA  11.37543
## 84                                                              NA  11.37543
## 85                                                              NA  11.37543
## 86                                                              NA  11.37543
## 87                                                              NA  11.37543
## 88                                                              NA  11.37543
## 89                                                              NA  11.37543
## 90                                                              NA  11.37543
## 91                                                              NA  11.37543
## 92                                                              NA  11.37543
## 93                                                              NA  11.37543
## 94                                                              NA  11.37543
## 95                                                              NA  11.37543
## 96                                                              NA  11.37543
## 97                                                              NA  11.37543
## 98                                                              NA  11.37543
## 99                                                              NA  11.37543
## 100                                                             NA  11.37543
## 101                                                             NA  11.37543
## 102                                                             NA  11.37543
## 103                                                             NA  11.37543
## 104                                                             NA  11.37543
## 105                                                             NA  11.37543
## 106                                                             NA  11.37543
## 107                                                             NA  11.37543
## 108                                                             NA  11.37543
## 109                                                             NA  11.37543
## 110                                                             NA  11.37543
## 111                                                             NA  11.37543
## 112                                                             NA  11.37543
## 113                                                             NA  11.37543
## 114                                                             NA  11.37543
## 115                                                             NA  11.37543
## 116                                                             NA  11.37543
## 117                                                             NA  11.37543
## 118                                                             NA  11.37543
## 119                                                             NA  11.37543
## 120                                                             NA  11.37543
## 121                                                             NA  11.37543
## 122                                                             NA  11.37543
## 123                                                             NA  11.37543
## 124                                                             NA  11.37543
## 125                                                             NA  11.37543
## 126                                                             NA  11.37543
## 127                                                             NA  11.37543
## 128                                                             NA  11.37543
## 129                                                             NA  11.37543
## 130                                                             NA  11.37543
## 131                                                             NA  11.37543
## 132                                                             NA  11.37543
## 133                                                             NA  11.37543
## 134                                                             NA  11.37543
## 135                                                             NA  11.37543
## 136                                                             NA  11.37543
## 137                                                             NA  11.37543
## 138                                                             NA  11.37543
## 139                                                             NA  11.37543
## 140                                                             NA  11.37543
## 141                                                             NA  11.37543
## 142                                                             NA  11.37543
## 143                                                             NA  11.37543
## 144                                                             NA  11.37543
## 145                                                             NA  11.37543
## 146                                                             NA  11.37543
## 147                                                             NA  11.37543
## 148                                                             NA  11.37543
## 149                                                             NA  11.37543
## 150                                                             NA  11.37543
## 151                                                             NA  11.37543
## 152                                                             NA  11.37543
## 153                                                             NA  11.37543
## 154                                                             NA  11.37543
## 155                                                             NA  11.37543
## 156                                                             NA  11.37543
## 157                                                             NA  11.37543
## 158                                                             NA  11.37543
## 159                                                             NA  11.37543
## 160                                                             NA  11.37543
## 161                                                             NA  11.37543
## 162                                                             NA  11.37543
## 163                                                             NA  11.37543
## 164                                                             NA  11.37543
## 165                                                             NA  11.37543
## 166                                                             NA  11.37543
## 167                                                             NA  11.37543
## 168                                                             NA  11.37543
## 169                                                             NA  11.37543
## 170                                                             NA  11.37543
## 171                                                             NA  11.37543
## 172                                                             NA  11.37543
## 173                                                             NA  11.37543
## 174                                                             NA  11.37543
## 175                                                             NA  11.37543
## 176                                                             NA  11.37543
## 177                                                             NA  11.37543
## 178                                                             NA  11.37543
## 179                                                             NA  11.37543
## 180                                                             NA  11.37543
## 181                                                             NA  11.37543
## 182                                                             NA  66.21310
## 183                                                             NA  66.21310
## 184                                                             NA  66.21310
## 185                                                             NA  66.21310
## 186                                                             NA  66.21310
## 187                                                             NA  66.21310
## 188                                                             NA  66.21310
## 189                                                             NA  66.21310
## 190                                                             NA  66.21310
## 191                                                             NA  66.21310
## 192                                                             NA  66.21310
## 193                                                             NA  66.21310
## 194                                                             NA  66.21310
## 195                                                             NA  66.21310
## 196                                                             NA  66.21310
## 197                                                             NA  66.21310
## 198                                                             NA  66.21310
## 199                                                             NA  66.21310
## 200                                                             NA  66.21310
## 201                                                             NA  66.21310
## 202                                                   7.743200e-05 356.68888
## 203                                                   2.058345e-02 356.68888
## 204                                                   1.477941e-03 356.68888
## 205                                                   6.356157e-03 356.68888
## 206                                                   1.720337e-03 356.68888
## 207                                                   2.794285e-04 356.68888
## 208                                                   1.562106e-03 356.68888
## 209                                                   2.605755e-03 356.68888
## 210                                                   2.454258e-03 356.68888
## 211                                                   7.625369e-03 356.68888
## 212                                                   1.462118e-02 356.68888
## 213                                                   6.329224e-04 356.68888
## 214                                                   1.871531e-01 356.68888
## 215                                                   2.962616e-04 356.68888
## 216                                                   5.487572e-04 356.68888
## 217                                                   4.241927e-04 356.68888
## 218                                                   4.679586e-04 356.68888
## 219                                                   0.000000e+00 356.68888
## 220                                                   7.743200e-05 356.68888
## 221                                                   7.339207e-04 356.68888
## 222                                                   6.733217e-05 356.68888
## 223                                                   2.659621e-04 356.68888
## 224                                                   4.679586e-04 356.68888
## 225                                                   2.625955e-04 356.68888
## 226                                                   1.683304e-05 356.68888
## 227                                                   3.231944e-04 356.68888
## 228                                                   1.885301e-04 356.68888
## 229                                                   3.306010e-03 356.68888
## 230                                                   8.955179e-04 356.68888
## 231                                                   1.201879e-03 356.68888
## 232                                                   8.349190e-04 356.68888
## 233                                                   5.150911e-04 356.68888
## 234                                                   1.737170e-03 356.68888
## 235                                                   1.333177e-03 356.68888
## 236                                                   9.897830e-04 356.68888
## 237                                                   9.190842e-04 356.68888
## 238                                                   6.396557e-05 356.68888
## 239                                                   1.279311e-04 356.68888
## 240                                                   2.289294e-04 356.68888
## 241                                                   1.817969e-04 356.68888
## 242                                                   1.279311e-04 356.68888
## 243                                                   2.289294e-04 356.68888
## 244                                                   8.079861e-05 356.68888
## 245                                                   3.770602e-04 356.68888
## 246                                                   7.945197e-04 356.68888
## 247                                                   6.093562e-04 356.68888
## 248                                                   8.770016e-03 356.68888
## 249                                                   4.309259e-04 356.68888
## 250                                                   1.642905e-03 356.68888
## 251                                                   9.759799e-03 356.68888
## 252                                                   4.659386e-03 356.68888
## 253                                                   1.434175e-03 356.68888
## 254                                                   1.986299e-04 356.68888
## 255                                                   3.097280e-04 356.68888
## 256                                                   2.144530e-03 356.68888
## 257                                                   4.743552e-03 356.68888
## 258                                                   2.726953e-04 356.68888
## 259                                                   4.410257e-04 356.68888
## 260                                                   9.879729e+00  50.49495
## 261                                                   7.797157e+00  50.49495
## 262                                                   2.119183e+01  50.49495
## 263                                                   1.789710e+00  50.49495
## 264                                                   5.562200e+00  50.49495
## 265                                                   1.421063e+01  50.49495
## 266                                                   6.628898e+00  50.49495
## 267                                                   4.512516e+00  50.49495
## 268                                                   7.707876e+00  50.49495
## 269                                                   7.272978e+00  50.49495
## 270                                                   1.875663e+01  50.49495
## 271                                                   5.334525e+01  50.49495
## 272                                                   4.690367e+00  50.49495
## 273                                                   2.564724e+00  50.49495
## 274                                                   1.355754e+01  50.49495
## 275                                                   1.019867e+00  50.49495
## 276                                                   0.000000e+00  50.49495
## 277                                                   2.832347e+00  50.49495
## 278                                                   1.109388e+00  50.49495
## 279                                                   1.974060e+00  50.49495
## 280                                                   5.729681e+00  50.49495
## 281                                                   1.025866e+01  50.49495
## 282                                                   4.236529e+00  50.49495
## 283                                                   2.522550e+01  50.49495
## 284                                                   7.986693e+00  50.49495
## 285                                                   2.122115e+01  50.49495
## 286                                                   3.726062e+00  50.49495
## 287                                                   1.474958e+00  50.49495
## 288                                                   5.582029e+01  50.49495
## 289                                                   3.521838e+00  50.49495
## 290                                                   3.443149e+00  50.49495
## 291                                                   2.510366e+00  50.49495
## 292                                                   6.675095e+00  50.49495
## 293                                                   5.475330e+00  50.49495
## 294                                                   2.933966e+01  50.49495
## 295                                                   9.847347e+00  50.49495
## 296                                                   2.065149e+00  50.49495
## 297                                                   1.271447e+01  50.49495
## 298                                                   6.923976e+00  50.49495
## 299                                                   3.302042e+00  50.49495
## 300                                                   5.518079e+00  50.49495
## 301                                                   8.977352e+00  50.49495
## 302                                                   2.055081e+01  50.49495
## 303                                                   7.510719e+00  50.49495
## 304                                                   6.384111e+00  50.49495
## 305                                                   1.146002e+01  50.49495
## 306                                                   1.181381e+01  50.49495
## 307                                                   6.229269e+00  50.49495
## 308                                                   9.976286e+00  50.49495
##     particle.L.master.05 particle.L.master.25 particle.L.master.50
## 1                     NA                   NA                   NA
## 2                     NA                   NA                   NA
## 3                     NA                   NA                   NA
## 4                     NA                   NA                   NA
## 5                     NA                   NA                   NA
## 6                     NA                   NA                   NA
## 7                     NA                   NA                   NA
## 8                     NA                   NA                   NA
## 9                     NA                   NA                   NA
## 10                    NA                   NA                   NA
## 11                    NA                   NA                   NA
## 12                    NA                   NA                   NA
## 13                    NA                   NA                   NA
## 14                    NA                   NA                   NA
## 15                    NA                   NA                   NA
## 16                    NA                   NA                   NA
## 17                    NA                   NA                   NA
## 18                    NA                   NA                   NA
## 19                    NA                   NA                   NA
## 20                    NA                   NA                   NA
## 21                    NA                   NA                   NA
## 22                    NA                   NA                   NA
## 23                    NA                   NA                   NA
## 24                    NA                   NA                   NA
## 25                    NA                   NA                   NA
## 26                    NA                   NA                   NA
## 27                    NA                   NA                   NA
## 28                    NA                   NA                   NA
## 29                    NA                   NA                   NA
## 30                    NA                   NA                   NA
## 31                    NA                   NA                   NA
## 32                    NA                   NA                   NA
## 33                    NA                   NA                   NA
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## 35                    NA                   NA                   NA
## 36                    NA                   NA                   NA
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## 185                   NA                   NA                   NA
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## 195                   NA                   NA                   NA
## 196                   NA                   NA                   NA
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## 200                   NA                   NA                   NA
## 201                   NA                   NA                   NA
## 202         0.0036296467          0.015366338         4.269176e-02
## 203         0.9648547824          4.084773614         1.134858e+01
## 204         0.0692789090          0.293296633         8.148559e-01
## 205         0.2979466518          1.261375954         3.504437e+00
## 206         0.0806412813          0.341399954         9.484996e-01
## 207         0.0130982903          0.055452439         1.540616e-01
## 208         0.0732241771          0.309999175         8.612599e-01
## 209         0.1221455024          0.517110693         1.436671e+00
## 210         0.1150440197          0.487046118         1.353143e+00
## 211         0.3574412957          1.513250284         4.204211e+00
## 212         0.6853719856          2.901565555         8.061319e+00
## 213         0.0296684166          0.125603114         3.489588e-01
## 214         8.7728561022         37.140439970         1.031860e+02
## 215         0.0138873439          0.058792947         1.633424e-01
## 216         0.0257231484          0.108900572         3.025547e-01
## 217         0.0198841516          0.084180810         2.338766e-01
## 218         0.0219356910          0.092866132         2.580067e-01
## 219         0.0000000000          0.000000000         0.000000e+00
## 220         0.0036296467          0.015366338         4.269176e-02
## 221         0.0344027384          0.145646164         4.046437e-01
## 222         0.0031562145          0.013362033         3.712327e-02
## 223         0.0124670474          0.052780032         1.466369e-01
## 224         0.0219356910          0.092866132         2.580067e-01
## 225         0.0123092367          0.052111930         1.447808e-01
## 226         0.0007890536          0.003340508         9.280818e-03
## 227         0.0151498298          0.064137760         1.781917e-01
## 228         0.0088374007          0.037413694         1.039452e-01
## 229         0.1549701335          0.656075841         1.822753e+00
## 230         0.0419776533          0.177715044         4.937395e-01
## 231         0.0563384294          0.238512296         6.626504e-01
## 232         0.0391370602          0.165689214         4.603286e-01
## 233         0.0241450412          0.102219556         2.839930e-01
## 234         0.0814303349          0.344740462         9.577805e-01
## 235         0.0624930477          0.264568262         7.350408e-01
## 236         0.0463963536          0.196421891         5.457121e-01
## 237         0.0430823284          0.182391756         5.067327e-01
## 238         0.0029984038          0.012693932         3.526711e-02
## 239         0.0059968076          0.025387863         7.053422e-02
## 240         0.0107311294          0.045430914         1.262191e-01
## 241         0.0085217792          0.036077490         1.002328e-01
## 242         0.0059968076          0.025387863         7.053422e-02
## 243         0.0107311294          0.045430914         1.262191e-01
## 244         0.0037874574          0.016034440         4.454793e-02
## 245         0.0176748014          0.074827387         2.078903e-01
## 246         0.0372433315          0.157671994         4.380546e-01
## 247         0.0285637415          0.120926402         3.359656e-01
## 248         0.4110969428          1.740404852         4.835306e+00
## 249         0.0201997730          0.085517014         2.375889e-01
## 250         0.0770116346          0.326033615         9.058079e-01
## 251         0.4574932964          1.936826743         5.381018e+00
## 252         0.2184100456          0.924652712         2.568931e+00
## 253         0.0672273695          0.284611312         7.907257e-01
## 254         0.0093108329          0.039417999         1.095137e-01
## 255         0.0145185868          0.061465354         1.707671e-01
## 256         0.1005254328          0.425580764         1.182376e+00
## 257         0.2223553138          0.941355254         2.615335e+00
## 258         0.0127826689          0.054116235         1.503493e-01
## 259         0.0206732052          0.087521319         2.431574e-01
## 260                   NA                   NA         1.749825e+02
## 261                   NA                   NA         1.380975e+02
## 262                   NA                   NA         3.753341e+02
## 263                   NA                   NA         3.169802e+01
## 264                   NA                   NA         9.851360e+01
## 265                   NA                   NA         2.516882e+02
## 266                   NA                   NA         1.174062e+02
## 267                   NA                   NA         7.992236e+01
## 268                   NA                   NA         1.365162e+02
## 269                   NA                   NA         1.288136e+02
## 270                   NA                   NA         3.322036e+02
## 271                   NA                   NA         9.448119e+02
## 272                   NA                   NA         1.514848e+02
## 273                   NA                   NA         8.283292e+01
## 274                   NA                   NA         4.378681e+02
## 275                   NA                   NA         3.293865e+01
## 276                   NA                   NA         0.000000e+00
## 277                   NA                   NA         9.147636e+01
## 278                   NA                   NA         3.582993e+01
## 279                   NA                   NA         6.375625e+01
## 280                   NA                   NA         1.850516e+02
## 281                   NA                   NA         1.564586e+02
## 282                   NA                   NA         6.461286e+01
## 283                   NA                   NA         3.847234e+02
## 284                   NA                   NA         1.218080e+02
## 285                   NA                   NA         6.853797e+02
## 286                   NA                   NA         1.203407e+02
## 287                   NA                   NA         4.763674e+01
## 288                   NA                   NA         1.802829e+03
## 289                   NA                   NA         1.137449e+02
## 290                   NA                   NA         1.112034e+02
## 291                   NA                   NA         8.107731e+01
## 292                   NA                   NA         2.155856e+02
## 293                   NA                   NA         1.768368e+02
## 294                   NA                   NA         9.475833e+02
## 295                   NA                   NA         3.180399e+02
## 296                   NA                   NA         5.039416e+01
## 297                   NA                   NA         3.102608e+02
## 298                   NA                   NA         1.689602e+02
## 299                   NA                   NA         8.057705e+01
## 300                   NA                   NA         1.346532e+02
## 301                   NA                   NA         2.190670e+02
## 302                   NA                   NA         5.014847e+02
## 303                   NA                   NA         1.683165e+02
## 304                   NA                   NA         1.430690e+02
## 305                   NA                   NA         2.568209e+02
## 306                   NA                   NA         2.647495e+02
## 307                   NA                   NA         1.395990e+02
## 308                   NA                   NA         2.235703e+02
##     particle.L.master.75 particle.L.master.95
## 1                     NA                   NA
## 2                     NA                   NA
## 3                     NA                   NA
## 4                     NA                   NA
## 5                     NA                   NA
## 6                     NA                   NA
## 7                     NA                   NA
## 8                     NA                   NA
## 9                     NA                   NA
## 10                    NA                   NA
## 11                    NA                   NA
## 12                    NA                   NA
## 13                    NA                   NA
## 14                    NA                   NA
## 15                    NA                   NA
## 16                    NA                   NA
## 17                    NA                   NA
## 18                    NA                   NA
## 19                    NA                   NA
## 20                    NA                   NA
## 21                    NA                   NA
## 22                    NA                   NA
## 23                    NA                   NA
## 24                    NA                   NA
## 25                    NA                   NA
## 26                    NA                   NA
## 27                    NA                   NA
## 28                    NA                   NA
## 29                    NA                   NA
## 30                    NA                   NA
## 31                    NA                   NA
## 32                    NA                   NA
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## 35                    NA                   NA
## 36                    NA                   NA
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## 40                    NA                   NA
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## 42                    NA                   NA
## 43                    NA                   NA
## 44                    NA                   NA
## 45                    NA                   NA
## 46                    NA                   NA
## 47                    NA                   NA
## 48                    NA                   NA
## 49                    NA                   NA
## 50                    NA                   NA
## 51                    NA                   NA
## 52                    NA                   NA
## 53                    NA                   NA
## 54                    NA                   NA
## 55                    NA                   NA
## 56                    NA                   NA
## 57                    NA                   NA
## 58                    NA                   NA
## 59                    NA                   NA
## 60                    NA                   NA
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## 62                    NA                   NA
## 63                    NA                   NA
## 64                    NA                   NA
## 65                    NA                   NA
## 66                    NA                   NA
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## 68                    NA                   NA
## 69                    NA                   NA
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## 72                    NA                   NA
## 73                    NA                   NA
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## 75                    NA                   NA
## 76                    NA                   NA
## 77                    NA                   NA
## 78                    NA                   NA
## 79                    NA                   NA
## 80                    NA                   NA
## 81                    NA                   NA
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## 83                    NA                   NA
## 84                    NA                   NA
## 85                    NA                   NA
## 86                    NA                   NA
## 87                    NA                   NA
## 88                    NA                   NA
## 89                    NA                   NA
## 90                    NA                   NA
## 91                    NA                   NA
## 92                    NA                   NA
## 93                    NA                   NA
## 94                    NA                   NA
## 95                    NA                   NA
## 96                    NA                   NA
## 97                    NA                   NA
## 98                    NA                   NA
## 99                    NA                   NA
## 100                   NA                   NA
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## 103                   NA                   NA
## 104                   NA                   NA
## 105                   NA                   NA
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## 114                   NA                   NA
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## 119                   NA                   NA
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## 122                   NA                   NA
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## 124                   NA                   NA
## 125                   NA                   NA
## 126                   NA                   NA
## 127                   NA                   NA
## 128                   NA                   NA
## 129                   NA                   NA
## 130                   NA                   NA
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## 132                   NA                   NA
## 133                   NA                   NA
## 134                   NA                   NA
## 135                   NA                   NA
## 136                   NA                   NA
## 137                   NA                   NA
## 138                   NA                   NA
## 139                   NA                   NA
## 140                   NA                   NA
## 141                   NA                   NA
## 142                   NA                   NA
## 143                   NA                   NA
## 144                   NA                   NA
## 145                   NA                   NA
## 146                   NA                   NA
## 147                   NA                   NA
## 148                   NA                   NA
## 149                   NA                   NA
## 150                   NA                   NA
## 151                   NA                   NA
## 152                   NA                   NA
## 153                   NA                   NA
## 154                   NA                   NA
## 155                   NA                   NA
## 156                   NA                   NA
## 157                   NA                   NA
## 158                   NA                   NA
## 159                   NA                   NA
## 160                   NA                   NA
## 161                   NA                   NA
## 162                   NA                   NA
## 163                   NA                   NA
## 164                   NA                   NA
## 165                   NA                   NA
## 166                   NA                   NA
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## 168                   NA                   NA
## 169                   NA                   NA
## 170                   NA                   NA
## 171                   NA                   NA
## 172                   NA                   NA
## 173                   NA                   NA
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## 175                   NA                   NA
## 176                   NA                   NA
## 177                   NA                   NA
## 178                   NA                   NA
## 179                   NA                   NA
## 180                   NA                   NA
## 181                   NA                   NA
## 182                   NA                   NA
## 183                   NA                   NA
## 184                   NA                   NA
## 185                   NA                   NA
## 186                   NA                   NA
## 187                   NA                   NA
## 188                   NA                   NA
## 189                   NA                   NA
## 190                   NA                   NA
## 191                   NA                   NA
## 192                   NA                   NA
## 193                   NA                   NA
## 194                   NA                   NA
## 195                   NA                   NA
## 196                   NA                   NA
## 197                   NA                   NA
## 198                   NA                   NA
## 199                   NA                   NA
## 200                   NA                   NA
## 201                   NA                   NA
## 202           0.11377462         4.440542e-01
## 203          30.24426261         1.180412e+02
## 204           2.17161127         8.475644e+00
## 205           9.33941246         3.645106e+01
## 206           2.52777530         9.865727e+00
## 207           0.41057798         1.602457e+00
## 208           2.29527933         8.958311e+00
## 209           3.82876337         1.494339e+01
## 210           3.60616085         1.407459e+01
## 211          11.20432692         4.372969e+01
## 212          21.48361670         8.384902e+01
## 213           0.92998387         3.629661e+00
## 214         274.99326178         1.073279e+03
## 215           0.43531160         1.698990e+00
## 216           0.80631580         3.146993e+00
## 217           0.62328706         2.432645e+00
## 218           0.68759446         2.683632e+00
## 219           0.00000000         0.000000e+00
## 220           0.11377462         4.440542e-01
## 221           1.07838555         4.208862e+00
## 222           0.09893445         3.861341e-01
## 223           0.39079109         1.525230e+00
## 224           0.68759446         2.683632e+00
## 225           0.38584437         1.505923e+00
## 226           0.02473361         9.653353e-02
## 227           0.47488538         1.853444e+00
## 228           0.27701647         1.081176e+00
## 229           4.85768169         1.895918e+01
## 230           1.31582824         5.135584e+00
## 231           1.76598000         6.892494e+00
## 232           1.22678723         4.788063e+00
## 233           0.75684857         2.953926e+00
## 234           2.55250891         9.962260e+00
## 235           1.95890219         7.645455e+00
## 236           1.45433647         5.676171e+00
## 237           1.35045530         5.270731e+00
## 238           0.09398773         3.668274e-01
## 239           0.18797546         7.336548e-01
## 240           0.33637714         1.312856e+00
## 241           0.26712303         1.042562e+00
## 242           0.18797546         7.336548e-01
## 243           0.33637714         1.312856e+00
## 244           0.11872134         4.633609e-01
## 245           0.55403294         2.162351e+00
## 246           1.16742656         4.556383e+00
## 247           0.89535681         3.494514e+00
## 248          12.88621264         5.029397e+01
## 249           0.63318051         2.471258e+00
## 250           2.41400068         9.421672e+00
## 251          14.34054912         5.597014e+01
## 252           6.84626422         2.672048e+01
## 253           2.10730387         8.224657e+00
## 254           0.29185664         1.139096e+00
## 255           0.45509849         1.776217e+00
## 256           3.15106236         1.229837e+01
## 257           6.96993229         2.720315e+01
## 258           0.40068454         1.563843e+00
## 259           0.64802067         2.529178e+00
## 260                   NA                   NA
## 261                   NA                   NA
## 262                   NA                   NA
## 263                   NA                   NA
## 264                   NA                   NA
## 265                   NA                   NA
## 266                   NA                   NA
## 267                   NA                   NA
## 268                   NA                   NA
## 269                   NA                   NA
## 270                   NA                   NA
## 271                   NA                   NA
## 272                   NA                   NA
## 273                   NA                   NA
## 274                   NA                   NA
## 275                   NA                   NA
## 276                   NA                   NA
## 277                   NA                   NA
## 278                   NA                   NA
## 279                   NA                   NA
## 280                   NA                   NA
## 281                   NA                   NA
## 282                   NA                   NA
## 283                   NA                   NA
## 284                   NA                   NA
## 285                   NA                   NA
## 286                   NA                   NA
## 287                   NA                   NA
## 288                   NA                   NA
## 289                   NA                   NA
## 290                   NA                   NA
## 291                   NA                   NA
## 292                   NA                   NA
## 293                   NA                   NA
## 294                   NA                   NA
## 295                   NA                   NA
## 296                   NA                   NA
## 297                   NA                   NA
## 298                   NA                   NA
## 299                   NA                   NA
## 300                   NA                   NA
## 301                   NA                   NA
## 302                   NA                   NA
## 303                   NA                   NA
## 304                   NA                   NA
## 305                   NA                   NA
## 306                   NA                   NA
## 307                   NA                   NA
## 308                   NA                   NA
##     particle.L.master.05.noFiberCorrection
## 1                                       NA
## 2                                       NA
## 3                                       NA
## 4                                       NA
## 5                                       NA
## 6                                       NA
## 7                                       NA
## 8                                       NA
## 9                                       NA
## 10                                      NA
## 11                                      NA
## 12                                      NA
## 13                                      NA
## 14                                      NA
## 15                                      NA
## 16                                      NA
## 17                                      NA
## 18                                      NA
## 19                                      NA
## 20                                      NA
## 21                                      NA
## 22                                      NA
## 23                                      NA
## 24                                      NA
## 25                                      NA
## 26                                      NA
## 27                                      NA
## 28                                      NA
## 29                                      NA
## 30                                      NA
## 31                                      NA
## 32                                      NA
## 33                                      NA
## 34                                      NA
## 35                                      NA
## 36                                      NA
## 37                                      NA
## 38                                      NA
## 39                                      NA
## 40                                      NA
## 41                                      NA
## 42                                      NA
## 43                                      NA
## 44                                      NA
## 45                                      NA
## 46                                      NA
## 47                                      NA
## 48                                      NA
## 49                                      NA
## 50                                      NA
## 51                                      NA
## 52                                      NA
## 53                                      NA
## 54                                      NA
## 55                                      NA
## 56                                      NA
## 57                                      NA
## 58                                      NA
## 59                                      NA
## 60                                      NA
## 61                                      NA
## 62                                      NA
## 63                                      NA
## 64                                      NA
## 65                                      NA
## 66                                      NA
## 67                                      NA
## 68                                      NA
## 69                                      NA
## 70                                      NA
## 71                                      NA
## 72                                      NA
## 73                                      NA
## 74                                      NA
## 75                                      NA
## 76                                      NA
## 77                                      NA
## 78                                      NA
## 79                                      NA
## 80                                      NA
## 81                                      NA
## 82                                      NA
## 83                                      NA
## 84                                      NA
## 85                                      NA
## 86                                      NA
## 87                                      NA
## 88                                      NA
## 89                                      NA
## 90                                      NA
## 91                                      NA
## 92                                      NA
## 93                                      NA
## 94                                      NA
## 95                                      NA
## 96                                      NA
## 97                                      NA
## 98                                      NA
## 99                                      NA
## 100                                     NA
## 101                                     NA
## 102                                     NA
## 103                                     NA
## 104                                     NA
## 105                                     NA
## 106                                     NA
## 107                                     NA
## 108                                     NA
## 109                                     NA
## 110                                     NA
## 111                                     NA
## 112                                     NA
## 113                                     NA
## 114                                     NA
## 115                                     NA
## 116                                     NA
## 117                                     NA
## 118                                     NA
## 119                                     NA
## 120                                     NA
## 121                                     NA
## 122                                     NA
## 123                                     NA
## 124                                     NA
## 125                                     NA
## 126                                     NA
## 127                                     NA
## 128                                     NA
## 129                                     NA
## 130                                     NA
## 131                                     NA
## 132                                     NA
## 133                                     NA
## 134                                     NA
## 135                                     NA
## 136                                     NA
## 137                                     NA
## 138                                     NA
## 139                                     NA
## 140                                     NA
## 141                                     NA
## 142                                     NA
## 143                                     NA
## 144                                     NA
## 145                                     NA
## 146                                     NA
## 147                                     NA
## 148                                     NA
## 149                                     NA
## 150                                     NA
## 151                                     NA
## 152                                     NA
## 153                                     NA
## 154                                     NA
## 155                                     NA
## 156                                     NA
## 157                                     NA
## 158                                     NA
## 159                                     NA
## 160                                     NA
## 161                                     NA
## 162                                     NA
## 163                                     NA
## 164                                     NA
## 165                                     NA
## 166                                     NA
## 167                                     NA
## 168                                     NA
## 169                                     NA
## 170                                     NA
## 171                                     NA
## 172                                     NA
## 173                                     NA
## 174                                     NA
## 175                                     NA
## 176                                     NA
## 177                                     NA
## 178                                     NA
## 179                                     NA
## 180                                     NA
## 181                                     NA
## 182                                     NA
## 183                                     NA
## 184                                     NA
## 185                                     NA
## 186                                     NA
## 187                                     NA
## 188                                     NA
## 189                                     NA
## 190                                     NA
## 191                                     NA
## 192                                     NA
## 193                                     NA
## 194                                     NA
## 195                                     NA
## 196                                     NA
## 197                                     NA
## 198                                     NA
## 199                                     NA
## 200                                     NA
## 201                                     NA
## 202                           0.0011142610
## 203                           0.2961996289
## 204                           0.0212678504
## 205                           0.0914662904
## 206                           0.0247559716
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## 255                           0.0044570438
## 256                           0.0308601838
## 257                           0.0682605949
## 258                           0.0039241364
## 259                           0.0063464428
## 260                                     NA
## 261                                     NA
## 262                                     NA
## 263                                     NA
## 264                                     NA
## 265                                     NA
## 266                                     NA
## 267                                     NA
## 268                                     NA
## 269                                     NA
## 270                                     NA
## 271                                     NA
## 272                                     NA
## 273                                     NA
## 274                                     NA
## 275                                     NA
## 276                                     NA
## 277                                     NA
## 278                                     NA
## 279                                     NA
## 280                                     NA
## 281                                     NA
## 282                                     NA
## 283                                     NA
## 284                                     NA
## 285                                     NA
## 286                                     NA
## 287                                     NA
## 288                                     NA
## 289                                     NA
## 290                                     NA
## 291                                     NA
## 292                                     NA
## 293                                     NA
## 294                                     NA
## 295                                     NA
## 296                                     NA
## 297                                     NA
## 298                                     NA
## 299                                     NA
## 300                                     NA
## 301                                     NA
## 302                                     NA
## 303                                     NA
## 304                                     NA
## 305                                     NA
## 306                                     NA
## 307                                     NA
## 308                                     NA
##     particle.L.master.25.noFiberCorrection
## 1                                       NA
## 2                                       NA
## 3                                       NA
## 4                                       NA
## 5                                       NA
## 6                                       NA
## 7                                       NA
## 8                                       NA
## 9                                       NA
## 10                                      NA
## 11                                      NA
## 12                                      NA
## 13                                      NA
## 14                                      NA
## 15                                      NA
## 16                                      NA
## 17                                      NA
## 18                                      NA
## 19                                      NA
## 20                                      NA
## 21                                      NA
## 22                                      NA
## 23                                      NA
## 24                                      NA
## 25                                      NA
## 26                                      NA
## 27                                      NA
## 28                                      NA
## 29                                      NA
## 30                                      NA
## 31                                      NA
## 32                                      NA
## 33                                      NA
## 34                                      NA
## 35                                      NA
## 36                                      NA
## 37                                      NA
## 38                                      NA
## 39                                      NA
## 40                                      NA
## 41                                      NA
## 42                                      NA
## 43                                      NA
## 44                                      NA
## 45                                      NA
## 46                                      NA
## 47                                      NA
## 48                                      NA
## 49                                      NA
## 50                                      NA
## 51                                      NA
## 52                                      NA
## 53                                      NA
## 54                                      NA
## 55                                      NA
## 56                                      NA
## 57                                      NA
## 58                                      NA
## 59                                      NA
## 60                                      NA
## 61                                      NA
## 62                                      NA
## 63                                      NA
## 64                                      NA
## 65                                      NA
## 66                                      NA
## 67                                      NA
## 68                                      NA
## 69                                      NA
## 70                                      NA
## 71                                      NA
## 72                                      NA
## 73                                      NA
## 74                                      NA
## 75                                      NA
## 76                                      NA
## 77                                      NA
## 78                                      NA
## 79                                      NA
## 80                                      NA
## 81                                      NA
## 82                                      NA
## 83                                      NA
## 84                                      NA
## 85                                      NA
## 86                                      NA
## 87                                      NA
## 88                                      NA
## 89                                      NA
## 90                                      NA
## 91                                      NA
## 92                                      NA
## 93                                      NA
## 94                                      NA
## 95                                      NA
## 96                                      NA
## 97                                      NA
## 98                                      NA
## 99                                      NA
## 100                                     NA
## 101                                     NA
## 102                                     NA
## 103                                     NA
## 104                                     NA
## 105                                     NA
## 106                                     NA
## 107                                     NA
## 108                                     NA
## 109                                     NA
## 110                                     NA
## 111                                     NA
## 112                                     NA
## 113                                     NA
## 114                                     NA
## 115                                     NA
## 116                                     NA
## 117                                     NA
## 118                                     NA
## 119                                     NA
## 120                                     NA
## 121                                     NA
## 122                                     NA
## 123                                     NA
## 124                                     NA
## 125                                     NA
## 126                                     NA
## 127                                     NA
## 128                                     NA
## 129                                     NA
## 130                                     NA
## 131                                     NA
## 132                                     NA
## 133                                     NA
## 134                                     NA
## 135                                     NA
## 136                                     NA
## 137                                     NA
## 138                                     NA
## 139                                     NA
## 140                                     NA
## 141                                     NA
## 142                                     NA
## 143                                     NA
## 144                                     NA
## 145                                     NA
## 146                                     NA
## 147                                     NA
## 148                                     NA
## 149                                     NA
## 150                                     NA
## 151                                     NA
## 152                                     NA
## 153                                     NA
## 154                                     NA
## 155                                     NA
## 156                                     NA
## 157                                     NA
## 158                                     NA
## 159                                     NA
## 160                                     NA
## 161                                     NA
## 162                                     NA
## 163                                     NA
## 164                                     NA
## 165                                     NA
## 166                                     NA
## 167                                     NA
## 168                                     NA
## 169                                     NA
## 170                                     NA
## 171                                     NA
## 172                                     NA
## 173                                     NA
## 174                                     NA
## 175                                     NA
## 176                                     NA
## 177                                     NA
## 178                                     NA
## 179                                     NA
## 180                                     NA
## 181                                     NA
## 182                                     NA
## 183                                     NA
## 184                                     NA
## 185                                     NA
## 186                                     NA
## 187                                     NA
## 188                                     NA
## 189                                     NA
## 190                                     NA
## 191                                     NA
## 192                                     NA
## 193                                     NA
## 194                                     NA
## 195                                     NA
## 196                                     NA
## 197                                     NA
## 198                                     NA
## 199                                     NA
## 200                                     NA
## 201                                     NA
## 202                           0.0026203615
## 203                           0.6965604462
## 204                           0.0500147262
## 205                           0.2150975012
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## 227                           0.0109371611
## 228                           0.0063800106
## 229                           0.1118780435
## 230                           0.0303050505
## 231                           0.0406725678
## 232                           0.0282543328
## 233                           0.0174311005
## 234                           0.0587872408
## 235                           0.0451157894
## 236                           0.0334950558
## 237                           0.0311025518
## 238                           0.0021646465
## 239                           0.0043292929
## 240                           0.0077471558
## 241                           0.0061521531
## 242                           0.0043292929
## 243                           0.0077471558
## 244                           0.0027342903
## 245                           0.0127600213
## 246                           0.0268871877
## 247                           0.0206211058
## 248                           0.2967844230
## 249                           0.0145828814
## 250                           0.0555972355
## 251                           0.3302794788
## 252                           0.1576774055
## 253                           0.0485336523
## 254                           0.0067217969
## 255                           0.0104814460
## 256                           0.0725726209
## 257                           0.1605256246
## 258                           0.0092282297
## 259                           0.0149246677
## 260                                     NA
## 261                                     NA
## 262                                     NA
## 263                                     NA
## 264                                     NA
## 265                                     NA
## 266                                     NA
## 267                                     NA
## 268                                     NA
## 269                                     NA
## 270                                     NA
## 271                                     NA
## 272                                     NA
## 273                                     NA
## 274                                     NA
## 275                                     NA
## 276                                     NA
## 277                                     NA
## 278                                     NA
## 279                                     NA
## 280                                     NA
## 281                                     NA
## 282                                     NA
## 283                                     NA
## 284                                     NA
## 285                                     NA
## 286                                     NA
## 287                                     NA
## 288                                     NA
## 289                                     NA
## 290                                     NA
## 291                                     NA
## 292                                     NA
## 293                                     NA
## 294                                     NA
## 295                                     NA
## 296                                     NA
## 297                                     NA
## 298                                     NA
## 299                                     NA
## 300                                     NA
## 301                                     NA
## 302                                     NA
## 303                                     NA
## 304                                     NA
## 305                                     NA
## 306                                     NA
## 307                                     NA
## 308                                     NA
##     particle.L.master.50.noFiberCorrection
## 1                                       NA
## 2                                       NA
## 3                                       NA
## 4                                       NA
## 5                                       NA
## 6                                       NA
## 7                                       NA
## 8                                       NA
## 9                                       NA
## 10                                      NA
## 11                                      NA
## 12                                      NA
## 13                                      NA
## 14                                      NA
## 15                                      NA
## 16                                      NA
## 17                                      NA
## 18                                      NA
## 19                                      NA
## 20                                      NA
## 21                                      NA
## 22                                      NA
## 23                                      NA
## 24                                      NA
## 25                                      NA
## 26                                      NA
## 27                                      NA
## 28                                      NA
## 29                                      NA
## 30                                      NA
## 31                                      NA
## 32                                      NA
## 33                                      NA
## 34                                      NA
## 35                                      NA
## 36                                      NA
## 37                                      NA
## 38                                      NA
## 39                                      NA
## 40                                      NA
## 41                                      NA
## 42                                      NA
## 43                                      NA
## 44                                      NA
## 45                                      NA
## 46                                      NA
## 47                                      NA
## 48                                      NA
## 49                                      NA
## 50                                      NA
## 51                                      NA
## 52                                      NA
## 53                                      NA
## 54                                      NA
## 55                                      NA
## 56                                      NA
## 57                                      NA
## 58                                      NA
## 59                                      NA
## 60                                      NA
## 61                                      NA
## 62                                      NA
## 63                                      NA
## 64                                      NA
## 65                                      NA
## 66                                      NA
## 67                                      NA
## 68                                      NA
## 69                                      NA
## 70                                      NA
## 71                                      NA
## 72                                      NA
## 73                                      NA
## 74                                      NA
## 75                                      NA
## 76                                      NA
## 77                                      NA
## 78                                      NA
## 79                                      NA
## 80                                      NA
## 81                                      NA
## 82                                      NA
## 83                                      NA
## 84                                      NA
## 85                                      NA
## 86                                      NA
## 87                                      NA
## 88                                      NA
## 89                                      NA
## 90                                      NA
## 91                                      NA
## 92                                      NA
## 93                                      NA
## 94                                      NA
## 95                                      NA
## 96                                      NA
## 97                                      NA
## 98                                      NA
## 99                                      NA
## 100                                     NA
## 101                                     NA
## 102                                     NA
## 103                                     NA
## 104                                     NA
## 105                                     NA
## 106                                     NA
## 107                                     NA
## 108                                     NA
## 109                                     NA
## 110                                     NA
## 111                                     NA
## 112                                     NA
## 113                                     NA
## 114                                     NA
## 115                                     NA
## 116                                     NA
## 117                                     NA
## 118                                     NA
## 119                                     NA
## 120                                     NA
## 121                                     NA
## 122                                     NA
## 123                                     NA
## 124                                     NA
## 125                                     NA
## 126                                     NA
## 127                                     NA
## 128                                     NA
## 129                                     NA
## 130                                     NA
## 131                                     NA
## 132                                     NA
## 133                                     NA
## 134                                     NA
## 135                                     NA
## 136                                     NA
## 137                                     NA
## 138                                     NA
## 139                                     NA
## 140                                     NA
## 141                                     NA
## 142                                     NA
## 143                                     NA
## 144                                     NA
## 145                                     NA
## 146                                     NA
## 147                                     NA
## 148                                     NA
## 149                                     NA
## 150                                     NA
## 151                                     NA
## 152                                     NA
## 153                                     NA
## 154                                     NA
## 155                                     NA
## 156                                     NA
## 157                                     NA
## 158                                     NA
## 159                                     NA
## 160                                     NA
## 161                                     NA
## 162                                     NA
## 163                                     NA
## 164                                     NA
## 165                                     NA
## 166                                     NA
## 167                                     NA
## 168                                     NA
## 169                                     NA
## 170                                     NA
## 171                                     NA
## 172                                     NA
## 173                                     NA
## 174                                     NA
## 175                                     NA
## 176                                     NA
## 177                                     NA
## 178                                     NA
## 179                                     NA
## 180                                     NA
## 181                                     NA
## 182                                     NA
## 183                                     NA
## 184                                     NA
## 185                                     NA
## 186                                     NA
## 187                                     NA
## 188                                     NA
## 189                                     NA
## 190                                     NA
## 191                                     NA
## 192                                     NA
## 193                                     NA
## 194                                     NA
## 195                                     NA
## 196                                     NA
## 197                                     NA
## 198                                     NA
## 199                                     NA
## 200                                     NA
## 201                                     NA
## 202                           4.839982e-03
## 203                           1.286593e+00
## 204                           9.238052e-02
## 205                           3.972994e-01
## 206                           1.075318e-01
## 207                           1.746602e-02
## 208                           9.764137e-02
## 209                           1.628759e-01
## 210                           1.534064e-01
## 211                           4.766330e-01
## 212                           9.139148e-01
## 213                           3.956159e-02
## 214                           1.169824e+01
## 215                           1.851819e-02
## 216                           3.430074e-02
## 217                           2.651468e-02
## 218                           2.925032e-02
## 219                           0.000000e+00
## 220                           4.839982e-03
## 221                           4.587461e-02
## 222                           4.208680e-03
## 223                           1.662428e-02
## 224                           2.925032e-02
## 225                           1.641385e-02
## 226                           1.052170e-03
## 227                           2.020166e-02
## 228                           1.178430e-02
## 229                           2.066462e-01
## 230                           5.597544e-02
## 231                           7.512493e-02
## 232                           5.218763e-02
## 233                           3.219640e-02
## 234                           1.085839e-01
## 235                           8.333186e-02
## 236                           6.186759e-02
## 237                           5.744848e-02
## 238                           3.998246e-03
## 239                           7.996492e-03
## 240                           1.430951e-02
## 241                           1.136344e-02
## 242                           7.996492e-03
## 243                           1.430951e-02
## 244                           5.050416e-03
## 245                           2.356861e-02
## 246                           4.966242e-02
## 247                           3.808855e-02
## 248                           5.481805e-01
## 249                           2.693555e-02
## 250                           1.026918e-01
## 251                           6.100481e-01
## 252                           2.912406e-01
## 253                           8.964488e-02
## 254                           1.241561e-02
## 255                           1.935993e-02
## 256                           1.340464e-01
## 257                           2.965015e-01
## 258                           1.704515e-02
## 259                           2.756685e-02
## 260                           1.749825e+02
## 261                           1.380975e+02
## 262                           3.753341e+02
## 263                           3.169802e+01
## 264                           9.851360e+01
## 265                           2.516882e+02
## 266                           1.174062e+02
## 267                           7.992236e+01
## 268                           1.365162e+02
## 269                           1.288136e+02
## 270                           3.322036e+02
## 271                           9.448119e+02
## 272                           1.514848e+02
## 273                           8.283292e+01
## 274                           4.378681e+02
## 275                           3.293865e+01
## 276                           0.000000e+00
## 277                           9.147636e+01
## 278                           3.582993e+01
## 279                           6.375625e+01
## 280                           1.850516e+02
## 281                           1.564586e+02
## 282                           6.461286e+01
## 283                           3.847234e+02
## 284                           1.218080e+02
## 285                           6.853797e+02
## 286                           1.203407e+02
## 287                           4.763674e+01
## 288                           1.802829e+03
## 289                           1.137449e+02
## 290                           1.112034e+02
## 291                           8.107731e+01
## 292                           2.155856e+02
## 293                           1.768368e+02
## 294                           9.475833e+02
## 295                           3.180399e+02
## 296                           5.039416e+01
## 297                           3.102608e+02
## 298                           1.689602e+02
## 299                           8.057705e+01
## 300                           1.346532e+02
## 301                           2.190670e+02
## 302                           5.014847e+02
## 303                           1.683165e+02
## 304                           1.430690e+02
## 305                           2.568209e+02
## 306                           2.647495e+02
## 307                           1.395990e+02
## 308                           2.235703e+02
##     particle.L.master.75.noFiberCorrection
## 1                                       NA
## 2                                       NA
## 3                                       NA
## 4                                       NA
## 5                                       NA
## 6                                       NA
## 7                                       NA
## 8                                       NA
## 9                                       NA
## 10                                      NA
## 11                                      NA
## 12                                      NA
## 13                                      NA
## 14                                      NA
## 15                                      NA
## 16                                      NA
## 17                                      NA
## 18                                      NA
## 19                                      NA
## 20                                      NA
## 21                                      NA
## 22                                      NA
## 23                                      NA
## 24                                      NA
## 25                                      NA
## 26                                      NA
## 27                                      NA
## 28                                      NA
## 29                                      NA
## 30                                      NA
## 31                                      NA
## 32                                      NA
## 33                                      NA
## 34                                      NA
## 35                                      NA
## 36                                      NA
## 37                                      NA
## 38                                      NA
## 39                                      NA
## 40                                      NA
## 41                                      NA
## 42                                      NA
## 43                                      NA
## 44                                      NA
## 45                                      NA
## 46                                      NA
## 47                                      NA
## 48                                      NA
## 49                                      NA
## 50                                      NA
## 51                                      NA
## 52                                      NA
## 53                                      NA
## 54                                      NA
## 55                                      NA
## 56                                      NA
## 57                                      NA
## 58                                      NA
## 59                                      NA
## 60                                      NA
## 61                                      NA
## 62                                      NA
## 63                                      NA
## 64                                      NA
## 65                                      NA
## 66                                      NA
## 67                                      NA
## 68                                      NA
## 69                                      NA
## 70                                      NA
## 71                                      NA
## 72                                      NA
## 73                                      NA
## 74                                      NA
## 75                                      NA
## 76                                      NA
## 77                                      NA
## 78                                      NA
## 79                                      NA
## 80                                      NA
## 81                                      NA
## 82                                      NA
## 83                                      NA
## 84                                      NA
## 85                                      NA
## 86                                      NA
## 87                                      NA
## 88                                      NA
## 89                                      NA
## 90                                      NA
## 91                                      NA
## 92                                      NA
## 93                                      NA
## 94                                      NA
## 95                                      NA
## 96                                      NA
## 97                                      NA
## 98                                      NA
## 99                                      NA
## 100                                     NA
## 101                                     NA
## 102                                     NA
## 103                                     NA
## 104                                     NA
## 105                                     NA
## 106                                     NA
## 107                                     NA
## 108                                     NA
## 109                                     NA
## 110                                     NA
## 111                                     NA
## 112                                     NA
## 113                                     NA
## 114                                     NA
## 115                                     NA
## 116                                     NA
## 117                                     NA
## 118                                     NA
## 119                                     NA
## 120                                     NA
## 121                                     NA
## 122                                     NA
## 123                                     NA
## 124                                     NA
## 125                                     NA
## 126                                     NA
## 127                                     NA
## 128                                     NA
## 129                                     NA
## 130                                     NA
## 131                                     NA
## 132                                     NA
## 133                                     NA
## 134                                     NA
## 135                                     NA
## 136                                     NA
## 137                                     NA
## 138                                     NA
## 139                                     NA
## 140                                     NA
## 141                                     NA
## 142                                     NA
## 143                                     NA
## 144                                     NA
## 145                                     NA
## 146                                     NA
## 147                                     NA
## 148                                     NA
## 149                                     NA
## 150                                     NA
## 151                                     NA
## 152                                     NA
## 153                                     NA
## 154                                     NA
## 155                                     NA
## 156                                     NA
## 157                                     NA
## 158                                     NA
## 159                                     NA
## 160                                     NA
## 161                                     NA
## 162                                     NA
## 163                                     NA
## 164                                     NA
## 165                                     NA
## 166                                     NA
## 167                                     NA
## 168                                     NA
## 169                                     NA
## 170                                     NA
## 171                                     NA
## 172                                     NA
## 173                                     NA
## 174                                     NA
## 175                                     NA
## 176                                     NA
## 177                                     NA
## 178                                     NA
## 179                                     NA
## 180                                     NA
## 181                                     NA
## 182                                     NA
## 183                                     NA
## 184                                     NA
## 185                                     NA
## 186                                     NA
## 187                                     NA
## 188                                     NA
## 189                                     NA
## 190                                     NA
## 191                                     NA
## 192                                     NA
## 193                                     NA
## 194                                     NA
## 195                                     NA
## 196                                     NA
## 197                                     NA
## 198                                     NA
## 199                                     NA
## 200                                     NA
## 201                                     NA
## 202                            0.008984217
## 203                            2.388239259
## 204                            0.171481360
## 205                            0.737487033
## 206                            0.199605865
## 207                            0.032421305
## 208                            0.181246813
## 209                            0.302338434
## 210                            0.284760618
## 211                            0.884750069
## 212                            1.696454547
## 213                            0.073436209
## 214                           21.714852578
## 215                            0.034374396
## 216                            0.063670756
## 217                            0.049217885
## 218                            0.054295920
## 219                            0.000000000
## 220                            0.008984217
## 221                            0.085154753
## 222                            0.007812363
## 223                            0.030858832
## 224                            0.054295920
## 225                            0.030468214
## 226                            0.001953091
## 227                            0.037499341
## 228                            0.021874615
## 229                            0.383587006
## 230                            0.103904423
## 231                            0.139450673
## 232                            0.096873297
## 233                            0.059764574
## 234                            0.201558956
## 235                            0.154684780
## 236                            0.114841731
## 237                            0.106638750
## 238                            0.007421745
## 239                            0.014843489
## 240                            0.026562033
## 241                            0.021093379
## 242                            0.014843489
## 243                            0.026562033
## 244                            0.009374835
## 245                            0.043749231
## 246                            0.092185879
## 247                            0.070701882
## 248                            1.017560234
## 249                            0.049999121
## 250                            0.190621648
## 251                            1.132401965
## 252                            0.540615495
## 253                            0.166403324
## 254                            0.023046470
## 255                            0.035936868
## 256                            0.248823750
## 257                            0.550380948
## 258                            0.031640069
## 259                            0.051170975
## 260                                     NA
## 261                                     NA
## 262                                     NA
## 263                                     NA
## 264                                     NA
## 265                                     NA
## 266                                     NA
## 267                                     NA
## 268                                     NA
## 269                                     NA
## 270                                     NA
## 271                                     NA
## 272                                     NA
## 273                                     NA
## 274                                     NA
## 275                                     NA
## 276                                     NA
## 277                                     NA
## 278                                     NA
## 279                                     NA
## 280                                     NA
## 281                                     NA
## 282                                     NA
## 283                                     NA
## 284                                     NA
## 285                                     NA
## 286                                     NA
## 287                                     NA
## 288                                     NA
## 289                                     NA
## 290                                     NA
## 291                                     NA
## 292                                     NA
## 293                                     NA
## 294                                     NA
## 295                                     NA
## 296                                     NA
## 297                                     NA
## 298                                     NA
## 299                                     NA
## 300                                     NA
## 301                                     NA
## 302                                     NA
## 303                                     NA
## 304                                     NA
## 305                                     NA
## 306                                     NA
## 307                                     NA
## 308                                     NA
##     particle.L.master.95.noFiberCorrection particle.L.master
## 1                                       NA      4.562359e+01
## 2                                       NA      4.618339e+01
## 3                                       NA      2.015275e+02
## 4                                       NA      1.575833e+02
## 5                                       NA      1.382703e+02
## 6                                       NA      2.359551e+02
## 7                                       NA      2.815787e+02
## 8                                       NA      6.465674e+01
## 9                                       NA      3.050903e+01
## 10                                      NA      4.993404e+02
## 11                                      NA      3.459556e+02
## 12                                      NA      6.832342e+02
## 13                                      NA      3.111812e-01
## 14                                      NA      5.548192e-02
## 15                                      NA      8.577988e-01
## 16                                      NA      2.031121e-01
## 17                                      NA      1.447355e-02
## 18                                      NA      2.605238e-02
## 19                                      NA      8.973598e-02
## 20                                      NA      1.124112e-01
## 21                                      NA      1.071042e-01
## 22                                      NA      3.753473e-01
## 23                                      NA      1.785071e-02
## 24                                      NA      2.653483e-02
## 25                                      NA      5.224950e-01
## 26                                      NA      7.685453e-01
## 27                                      NA      8.761320e-01
## 28                                      NA      3.618386e-02
## 29                                      NA      3.295144e-01
## 30                                      NA                NA
## 31                                      NA                NA
## 32                                      NA                NA
## 33                                      NA                NA
## 34                                      NA                NA
## 35                                      NA                NA
## 36                                      NA                NA
## 37                                      NA                NA
## 38                                      NA                NA
## 39                                      NA                NA
## 40                                      NA                NA
## 41                                      NA                NA
## 42                                      NA                NA
## 43                                      NA                NA
## 44                                      NA                NA
## 45                                      NA                NA
## 46                                      NA                NA
## 47                                      NA                NA
## 48                                      NA                NA
## 49                                      NA                NA
## 50                                      NA                NA
## 51                                      NA                NA
## 52                                      NA                NA
## 53                                      NA                NA
## 54                                      NA                NA
## 55                                      NA                NA
## 56                                      NA                NA
## 57                                      NA                NA
## 58                                      NA                NA
## 59                                      NA                NA
## 60                                      NA                NA
## 61                                      NA                NA
## 62                                      NA                NA
## 63                                      NA                NA
## 64                                      NA                NA
## 65                                      NA                NA
## 66                                      NA                NA
## 67                                      NA                NA
## 68                                      NA                NA
## 69                                      NA                NA
## 70                                      NA                NA
## 71                                      NA                NA
## 72                                      NA                NA
## 73                                      NA                NA
## 74                                      NA                NA
## 75                                      NA                NA
## 76                                      NA                NA
## 77                                      NA                NA
## 78                                      NA                NA
## 79                                      NA                NA
## 80                                      NA                NA
## 81                                      NA                NA
## 82                                      NA                NA
## 83                                      NA                NA
## 84                                      NA                NA
## 85                                      NA                NA
## 86                                      NA                NA
## 87                                      NA                NA
## 88                                      NA                NA
## 89                                      NA                NA
## 90                                      NA                NA
## 91                                      NA                NA
## 92                                      NA                NA
## 93                                      NA                NA
## 94                                      NA                NA
## 95                                      NA                NA
## 96                                      NA                NA
## 97                                      NA                NA
## 98                                      NA                NA
## 99                                      NA                NA
## 100                                     NA                NA
## 101                                     NA                NA
## 102                                     NA                NA
## 103                                     NA                NA
## 104                                     NA                NA
## 105                                     NA                NA
## 106                                     NA                NA
## 107                                     NA                NA
## 108                                     NA                NA
## 109                                     NA                NA
## 110                                     NA                NA
## 111                                     NA                NA
## 112                                     NA                NA
## 113                                     NA                NA
## 114                                     NA                NA
## 115                                     NA                NA
## 116                                     NA                NA
## 117                                     NA                NA
## 118                                     NA                NA
## 119                                     NA                NA
## 120                                     NA                NA
## 121                                     NA                NA
## 122                                     NA                NA
## 123                                     NA                NA
## 124                                     NA                NA
## 125                                     NA                NA
## 126                                     NA                NA
## 127                                     NA                NA
## 128                                     NA                NA
## 129                                     NA                NA
## 130                                     NA                NA
## 131                                     NA                NA
## 132                                     NA                NA
## 133                                     NA                NA
## 134                                     NA                NA
## 135                                     NA                NA
## 136                                     NA                NA
## 137                                     NA                NA
## 138                                     NA                NA
## 139                                     NA                NA
## 140                                     NA                NA
## 141                                     NA                NA
## 142                                     NA                NA
## 143                                     NA                NA
## 144                                     NA                NA
## 145                                     NA                NA
## 146                                     NA                NA
## 147                                     NA                NA
## 148                                     NA                NA
## 149                                     NA                NA
## 150                                     NA                NA
## 151                                     NA                NA
## 152                                     NA                NA
## 153                                     NA                NA
## 154                                     NA                NA
## 155                                     NA                NA
## 156                                     NA                NA
## 157                                     NA                NA
## 158                                     NA                NA
## 159                                     NA                NA
## 160                                     NA                NA
## 161                                     NA                NA
## 162                                     NA                NA
## 163                                     NA                NA
## 164                                     NA                NA
## 165                                     NA                NA
## 166                                     NA                NA
## 167                                     NA                NA
## 168                                     NA                NA
## 169                                     NA                NA
## 170                                     NA                NA
## 171                                     NA                NA
## 172                                     NA                NA
## 173                                     NA                NA
## 174                                     NA                NA
## 175                                     NA                NA
## 176                                     NA                NA
## 177                                     NA                NA
## 178                                     NA                NA
## 179                                     NA                NA
## 180                                     NA                NA
## 181                                     NA                NA
## 182                                     NA                NA
## 183                                     NA                NA
## 184                                     NA                NA
## 185                                     NA                NA
## 186                                     NA                NA
## 187                                     NA                NA
## 188                                     NA                NA
## 189                                     NA                NA
## 190                                     NA                NA
## 191                                     NA                NA
## 192                                     NA                NA
## 193                                     NA                NA
## 194                                     NA                NA
## 195                                     NA                NA
## 196                                     NA                NA
## 197                                     NA                NA
## 198                                     NA                NA
## 199                                     NA                NA
## 200                                     NA                NA
## 201                                     NA                NA
## 202                            0.022584423      4.269176e-02
## 203                            6.003528734      1.134858e+01
## 204                            0.431067896      8.148559e-01
## 205                            1.853886531      3.504437e+00
## 206                            0.501766958      9.484996e-01
## 207                            0.081500308      1.540616e-01
## 208                            0.455616181      8.612599e-01
## 209                            0.760014923      1.436671e+00
## 210                            0.715828009      1.353143e+00
## 211                            2.224074678      4.204211e+00
## 212                            4.264528180      8.061319e+00
## 213                            0.184603108      3.489588e-01
## 214                           54.586549865      1.031860e+02
## 215                            0.086409965      1.633424e-01
## 216                            0.160054822      3.025547e-01
## 217                            0.123723360      2.338766e-01
## 218                            0.136488468      2.580067e-01
## 219                            0.000000000      0.000000e+00
## 220                            0.022584423      4.269176e-02
## 221                            0.214061051      4.046437e-01
## 222                            0.019638629      3.712327e-02
## 223                            0.077572583      1.466369e-01
## 224                            0.136488468      2.580067e-01
## 225                            0.076590651      1.447808e-01
## 226                            0.004909657      9.280818e-03
## 227                            0.094265417      1.781917e-01
## 228                            0.054988160      1.039452e-01
## 229                            0.964256660      1.822753e+00
## 230                            0.261193759      4.937395e-01
## 231                            0.350549519      6.626504e-01
## 232                            0.243518993      4.603286e-01
## 233                            0.150235508      2.839930e-01
## 234                            0.506676615      9.577805e-01
## 235                            0.388844844      7.350408e-01
## 236                            0.288687839      5.457121e-01
## 237                            0.268067279      5.067327e-01
## 238                            0.018656697      3.526711e-02
## 239                            0.037313394      7.053422e-02
## 240                            0.066771337      1.262191e-01
## 241                            0.053024297      1.002328e-01
## 242                            0.037313394      7.053422e-02
## 243                            0.066771337      1.262191e-01
## 244                            0.023566354      4.454793e-02
## 245                            0.109976320      2.078903e-01
## 246                            0.231735816      4.380546e-01
## 247                            0.177729588      3.359656e-01
## 248                            2.557931363      4.835306e+00
## 249                            0.125687222      2.375889e-01
## 250                            0.479182536      9.058079e-01
## 251                            2.846619202      5.381018e+00
## 252                            1.358993093      2.568931e+00
## 253                            0.418302787      7.907257e-01
## 254                            0.057933954      1.095137e-01
## 255                            0.090337691      1.707671e-01
## 256                            0.625490318      1.182376e+00
## 257                            1.383541378      2.615335e+00
## 258                            0.079536445      1.503493e-01
## 259                            0.128633017      2.431574e-01
## 260                                     NA      1.749825e+02
## 261                                     NA      1.380975e+02
## 262                                     NA      3.753341e+02
## 263                                     NA      3.169802e+01
## 264                                     NA      9.851360e+01
## 265                                     NA      2.516882e+02
## 266                                     NA      1.174062e+02
## 267                                     NA      7.992236e+01
## 268                                     NA      1.365162e+02
## 269                                     NA      1.288136e+02
## 270                                     NA      3.322036e+02
## 271                                     NA      9.448119e+02
## 272                                     NA      1.514848e+02
## 273                                     NA      8.283292e+01
## 274                                     NA      4.378681e+02
## 275                                     NA      3.293865e+01
## 276                                     NA      0.000000e+00
## 277                                     NA      9.147636e+01
## 278                                     NA      3.582993e+01
## 279                                     NA      6.375625e+01
## 280                                     NA      1.850516e+02
## 281                                     NA      1.564586e+02
## 282                                     NA      6.461286e+01
## 283                                     NA      3.847234e+02
## 284                                     NA      1.218080e+02
## 285                                     NA      6.853797e+02
## 286                                     NA      1.203407e+02
## 287                                     NA      4.763674e+01
## 288                                     NA      1.802829e+03
## 289                                     NA      1.137449e+02
## 290                                     NA      1.112034e+02
## 291                                     NA      8.107731e+01
## 292                                     NA      2.155856e+02
## 293                                     NA      1.768368e+02
## 294                                     NA      9.475833e+02
## 295                                     NA      3.180399e+02
## 296                                     NA      5.039416e+01
## 297                                     NA      3.102608e+02
## 298                                     NA      1.689602e+02
## 299                                     NA      8.057705e+01
## 300                                     NA      1.346532e+02
## 301                                     NA      2.190670e+02
## 302                                     NA      5.014847e+02
## 303                                     NA      1.683165e+02
## 304                                     NA      1.430690e+02
## 305                                     NA      2.568209e+02
## 306                                     NA      2.647495e+02
## 307                                     NA      1.395990e+02
## 308                                     NA      2.235703e+02
##     particle.fish.master particles.kg.master source       Reference compartment
## 1                     NA                  NA   SFEI Zhu et. al 2021      marine
## 2                     NA                  NA   SFEI Zhu et. al 2021      marine
## 3                     NA                  NA   SFEI Zhu et. al 2021      marine
## 4                     NA                  NA   SFEI Zhu et. al 2021      marine
## 5                     NA                  NA   SFEI Zhu et. al 2021      marine
## 6                     NA                  NA   SFEI Zhu et. al 2021      marine
## 7                     NA                  NA   SFEI Zhu et. al 2021      marine
## 8                     NA                  NA   SFEI Zhu et. al 2021      marine
## 9                     NA                  NA   SFEI Zhu et. al 2021      marine
## 10                    NA                  NA   SFEI Zhu et. al 2021      marine
## 11                    NA                  NA   SFEI Zhu et. al 2021      marine
## 12                    NA                  NA   SFEI Zhu et. al 2021      marine
## 13                    NA                  NA   SFEI Zhu et. al 2021      marine
## 14                    NA                  NA   SFEI Zhu et. al 2021      marine
## 15                    NA                  NA   SFEI Zhu et. al 2021      marine
## 16                    NA                  NA   SFEI Zhu et. al 2021      marine
## 17                    NA                  NA   SFEI Zhu et. al 2021      marine
## 18                    NA                  NA   SFEI Zhu et. al 2021      marine
## 19                    NA                  NA   SFEI Zhu et. al 2021      marine
## 20                    NA                  NA   SFEI Zhu et. al 2021      marine
## 21                    NA                  NA   SFEI Zhu et. al 2021      marine
## 22                    NA                  NA   SFEI Zhu et. al 2021      marine
## 23                    NA                  NA   SFEI Zhu et. al 2021      marine
## 24                    NA                  NA   SFEI Zhu et. al 2021      marine
## 25                    NA                  NA   SFEI Zhu et. al 2021      marine
## 26                    NA                  NA   SFEI Zhu et. al 2021      marine
## 27                    NA                  NA   SFEI Zhu et. al 2021      marine
## 28                    NA                  NA   SFEI Zhu et. al 2021      marine
## 29                    NA                  NA   SFEI Zhu et. al 2021      marine
## 30            41.4122502                  NA   SFEI Zhu et. al 2021      marine
## 31            11.2616750                  NA   SFEI Zhu et. al 2021      marine
## 32             1.4844935                  NA   SFEI Zhu et. al 2021      marine
## 33             1.7063144                  NA   SFEI Zhu et. al 2021      marine
## 34             1.5868724                  NA   SFEI Zhu et. al 2021      marine
## 35             6.0232898                  NA   SFEI Zhu et. al 2021      marine
## 36             4.0951545                  NA   SFEI Zhu et. al 2021      marine
## 37            76.9035894                  NA   SFEI Zhu et. al 2021      marine
## 38            13.6505151                  NA   SFEI Zhu et. al 2021      marine
## 39            19.9126889                  NA   SFEI Zhu et. al 2021      marine
## 40             9.7771814                  NA   SFEI Zhu et. al 2021      marine
## 41            10.0160654                  NA   SFEI Zhu et. al 2021      marine
## 42            24.6903692                  NA   SFEI Zhu et. al 2021      marine
## 43             3.0713659                  NA   SFEI Zhu et. al 2021      marine
## 44             0.0000000                  NA   SFEI Zhu et. al 2021      marine
## 45             0.0000000                  NA   SFEI Zhu et. al 2021      marine
## 46             2.5583340                  NA   SFEI Zhu et. al 2021      marine
## 47             0.1922448                  NA   SFEI Zhu et. al 2021      marine
## 48             2.6618504                  NA   SFEI Zhu et. al 2021      marine
## 49             1.4788058                  NA   SFEI Zhu et. al 2021      marine
## 50             8.0890677                  NA   SFEI Zhu et. al 2021      marine
## 51             5.7229785                  NA   SFEI Zhu et. al 2021      marine
## 52            10.9431629                  NA   SFEI Zhu et. al 2021      marine
## 53             8.8728348                  NA   SFEI Zhu et. al 2021      marine
## 54             8.0890677                  NA   SFEI Zhu et. al 2021      marine
## 55             5.3237009                  NA   SFEI Zhu et. al 2021      marine
## 56             0.0000000                  NA   SFEI Zhu et. al 2021      marine
## 57             2.9576116                  NA   SFEI Zhu et. al 2021      marine
## 58             3.9484115                  NA   SFEI Zhu et. al 2021      marine
## 59             2.3660893                  NA   SFEI Zhu et. al 2021      marine
## 60             1.6710506                  NA   SFEI Zhu et. al 2021      marine
## 61             2.3660893                  NA   SFEI Zhu et. al 2021      marine
## 62             2.3660893                  NA   SFEI Zhu et. al 2021      marine
## 63             1.2865610                  NA   SFEI Zhu et. al 2021      marine
## 64             9.3608407                  NA   SFEI Zhu et. al 2021      marine
## 65             0.1922448                  NA   SFEI Zhu et. al 2021      marine
## 66            22.7736093                  NA   SFEI Zhu et. al 2021      marine
## 67            16.6661414                  NA   SFEI Zhu et. al 2021      marine
## 68            16.8583861                  NA   SFEI Zhu et. al 2021      marine
## 69             4.8356950                  NA   SFEI Zhu et. al 2021      marine
## 70            16.7548697                  NA   SFEI Zhu et. al 2021      marine
## 71             2.7653668                  NA   SFEI Zhu et. al 2021      marine
## 72             3.5491339                  NA   SFEI Zhu et. al 2021      marine
## 73             1.4788058                  NA   SFEI Zhu et. al 2021      marine
## 74            26.5877908                  NA   SFEI Zhu et. al 2021      marine
## 75            21.6667801                  NA   SFEI Zhu et. al 2021      marine
## 76             9.3881418                  NA   SFEI Zhu et. al 2021      marine
## 77            21.1890121                  NA   SFEI Zhu et. al 2021      marine
## 78            22.4550973                  NA   SFEI Zhu et. al 2021      marine
## 79             8.1220565                  NA   SFEI Zhu et. al 2021      marine
## 80            21.4995613                  NA   SFEI Zhu et. al 2021      marine
## 81            39.1769783                  NA   SFEI Zhu et. al 2021      marine
## 82            15.7663449                  NA   SFEI Zhu et. al 2021      marine
## 83             4.2999123                  NA   SFEI Zhu et. al 2021      marine
## 84            41.8763677                  NA   SFEI Zhu et. al 2021      marine
## 85            41.2552692                  NA   SFEI Zhu et. al 2021      marine
## 86            26.4444604                  NA   SFEI Zhu et. al 2021      marine
## 87            57.3321634                  NA   SFEI Zhu et. al 2021      marine
## 88            48.5651201                  NA   SFEI Zhu et. al 2021      marine
## 89            34.7098473                  NA   SFEI Zhu et. al 2021      marine
## 90            42.3541357                  NA   SFEI Zhu et. al 2021      marine
## 91            22.7656465                  NA   SFEI Zhu et. al 2021      marine
## 92            32.1776767                  NA   SFEI Zhu et. al 2021      marine
## 93            34.8770661                  NA   SFEI Zhu et. al 2021      marine
## 94            83.9199542                  NA   SFEI Zhu et. al 2021      marine
## 95            48.7323389                  NA   SFEI Zhu et. al 2021      marine
## 96            67.1980732                  NA   SFEI Zhu et. al 2021      marine
## 97            31.3654711                  NA   SFEI Zhu et. al 2021      marine
## 98            31.3654711                  NA   SFEI Zhu et. al 2021      marine
## 99            13.6880540                  NA   SFEI Zhu et. al 2021      marine
## 100           34.3992980                  NA   SFEI Zhu et. al 2021      marine
## 101           35.9998209                  NA   SFEI Zhu et. al 2021      marine
## 102           52.3872643                  NA   SFEI Zhu et. al 2021      marine
## 103           17.6774170                  NA   SFEI Zhu et. al 2021      marine
## 104           51.5989471                  NA   SFEI Zhu et. al 2021      marine
## 105           84.5649410                  NA   SFEI Zhu et. al 2021      marine
## 106           53.8205684                  NA   SFEI Zhu et. al 2021      marine
## 107           15.9335637                  NA   SFEI Zhu et. al 2021      marine
## 108           29.4543989                  NA   SFEI Zhu et. al 2021      marine
## 109           45.0774135                  NA   SFEI Zhu et. al 2021      marine
## 110           20.0662572                  NA   SFEI Zhu et. al 2021      marine
## 111            8.1220565                  NA   SFEI Zhu et. al 2021      marine
## 112           18.1722482                  NA   SFEI Zhu et. al 2021      marine
## 113            1.4739712                  NA   SFEI Zhu et. al 2021      marine
## 114            4.9872726                  NA   SFEI Zhu et. al 2021      marine
## 115           14.6791383                  NA   SFEI Zhu et. al 2021      marine
## 116            4.8459329                  NA   SFEI Zhu et. al 2021      marine
## 117            3.3719616                  NA   SFEI Zhu et. al 2021      marine
## 118            5.5122486                  NA   SFEI Zhu et. al 2021      marine
## 119           10.9033489                  NA   SFEI Zhu et. al 2021      marine
## 120            1.4739712                  NA   SFEI Zhu et. al 2021      marine
## 121            3.3719616                  NA   SFEI Zhu et. al 2021      marine
## 122            9.0093400                  NA   SFEI Zhu et. al 2021      marine
## 123            4.3294884                  NA   SFEI Zhu et. al 2021      marine
## 124            2.5025944                  NA   SFEI Zhu et. al 2021      marine
## 125            4.1793327                  NA   SFEI Zhu et. al 2021      marine
## 126           32.2083904                  NA   SFEI Zhu et. al 2021      marine
## 127           11.3367528                  NA   SFEI Zhu et. al 2021      marine
## 128            8.5088211                  NA   SFEI Zhu et. al 2021      marine
## 129            9.3346772                  NA   SFEI Zhu et. al 2021      marine
## 130            4.6798516                  NA   SFEI Zhu et. al 2021      marine
## 131           11.8372717                  NA   SFEI Zhu et. al 2021      marine
## 132           25.3512816                  NA   SFEI Zhu et. al 2021      marine
## 133           67.8953870                  NA   SFEI Zhu et. al 2021      marine
## 134           78.0809463                  NA   SFEI Zhu et. al 2021      marine
## 135           87.9161425                  NA   SFEI Zhu et. al 2021      marine
## 136           67.5700497                  NA   SFEI Zhu et. al 2021      marine
## 137           60.0622664                  NA   SFEI Zhu et. al 2021      marine
## 138          140.4706256                  NA   SFEI Zhu et. al 2021      marine
## 139           40.7172114                  NA   SFEI Zhu et. al 2021      marine
## 140           52.8798204                  NA   SFEI Zhu et. al 2021      marine
## 141           70.3979814                  NA   SFEI Zhu et. al 2021      marine
## 142           53.1994699                  NA   SFEI Zhu et. al 2021      marine
## 143           22.1445481                  NA   SFEI Zhu et. al 2021      marine
## 144           57.4993822                  NA   SFEI Zhu et. al 2021      marine
## 145           17.6774170                  NA   SFEI Zhu et. al 2021      marine
## 146           29.3110685                  NA   SFEI Zhu et. al 2021      marine
## 147           17.0324302                  NA   SFEI Zhu et. al 2021      marine
## 148           17.9879663                  NA   SFEI Zhu et. al 2021      marine
## 149           18.8001719                  NA   SFEI Zhu et. al 2021      marine
## 150            5.0882295                  NA   SFEI Zhu et. al 2021      marine
## 151            4.6104615                  NA   SFEI Zhu et. al 2021      marine
## 152           18.8001719                  NA   SFEI Zhu et. al 2021      marine
## 153            3.6549254                  NA   SFEI Zhu et. al 2021      marine
## 154            6.6887524                  NA   SFEI Zhu et. al 2021      marine
## 155           20.0662572                  NA   SFEI Zhu et. al 2021      marine
## 156           29.6216178                  NA   SFEI Zhu et. al 2021      marine
## 157            9.2448113                  NA   SFEI Zhu et. al 2021      marine
## 158           21.1890121                  NA   SFEI Zhu et. al 2021      marine
## 159           15.4557957                  NA   SFEI Zhu et. al 2021      marine
## 160           10.8214458                  NA   SFEI Zhu et. al 2021      marine
## 161            6.8559712                  NA   SFEI Zhu et. al 2021      marine
## 162           66.4902371                  NA   SFEI Zhu et. al 2021      marine
## 163           31.4985636                  NA   SFEI Zhu et. al 2021      marine
## 164           89.1045904                  NA   SFEI Zhu et. al 2021      marine
## 165           35.2743529                  NA   SFEI Zhu et. al 2021      marine
## 166            8.0765548                  NA   SFEI Zhu et. al 2021      marine
## 167           13.1849757                  NA   SFEI Zhu et. al 2021      marine
## 168           17.7684205                  NA   SFEI Zhu et. al 2021      marine
## 169           20.7365544                  NA   SFEI Zhu et. al 2021      marine
## 170           15.7492818                  NA   SFEI Zhu et. al 2021      marine
## 171            1.6153110                  NA   SFEI Zhu et. al 2021      marine
## 172           30.2711548                  NA   SFEI Zhu et. al 2021      marine
## 173           19.7124813                  NA   SFEI Zhu et. al 2021      marine
## 174            6.3145008                  NA   SFEI Zhu et. al 2021      marine
## 175            3.8448951                  NA   SFEI Zhu et. al 2021      marine
## 176            9.4643571                  NA   SFEI Zhu et. al 2021      marine
## 177            9.5678735                  NA   SFEI Zhu et. al 2021      marine
## 178            1.4788058                  NA   SFEI Zhu et. al 2021      marine
## 179            5.5159456                  NA   SFEI Zhu et. al 2021      marine
## 180            3.3568892                  NA   SFEI Zhu et. al 2021      marine
## 181            8.2813125                  NA   SFEI Zhu et. al 2021      marine
## 182                   NA          10707.5060   SFEI Zhu et. al 2021      marine
## 183                   NA          33228.5151   SFEI Zhu et. al 2021      marine
## 184                   NA          46932.7466   SFEI Zhu et. al 2021      marine
## 185                   NA         352392.6925   SFEI Zhu et. al 2021      marine
## 186                   NA          79555.2794   SFEI Zhu et. al 2021      marine
## 187                   NA        1393923.8329   SFEI Zhu et. al 2021      marine
## 188                   NA         120748.1976   SFEI Zhu et. al 2021      marine
## 189                   NA         235344.5360   SFEI Zhu et. al 2021      marine
## 190                   NA          72811.0910   SFEI Zhu et. al 2021      marine
## 191                   NA          21583.9878   SFEI Zhu et. al 2021      marine
## 192                   NA            688.7023   SFEI Zhu et. al 2021      marine
## 193                   NA           8091.1549   SFEI Zhu et. al 2021      marine
## 194                   NA         233263.1536   SFEI Zhu et. al 2021      marine
## 195                   NA         177270.4155   SFEI Zhu et. al 2021      marine
## 196                   NA          14285.9003   SFEI Zhu et. al 2021      marine
## 197                   NA          25867.2471   SFEI Zhu et. al 2021      marine
## 198                   NA           6290.2446   SFEI Zhu et. al 2021      marine
## 199                   NA           3296.5914   SFEI Zhu et. al 2021      marine
## 200                   NA           1192.6701   SFEI Zhu et. al 2021      marine
## 201                   NA           2578.8943   SFEI Zhu et. al 2021      marine
## 202                   NA                  NA   SFEI Zhu et. al 2021      marine
## 203                   NA                  NA   SFEI Zhu et. al 2021      marine
## 204                   NA                  NA   SFEI Zhu et. al 2021      marine
## 205                   NA                  NA   SFEI Zhu et. al 2021      marine
## 206                   NA                  NA   SFEI Zhu et. al 2021      marine
## 207                   NA                  NA   SFEI Zhu et. al 2021      marine
## 208                   NA                  NA   SFEI Zhu et. al 2021      marine
## 209                   NA                  NA   SFEI Zhu et. al 2021      marine
## 210                   NA                  NA   SFEI Zhu et. al 2021      marine
## 211                   NA                  NA   SFEI Zhu et. al 2021      marine
## 212                   NA                  NA   SFEI Zhu et. al 2021      marine
## 213                   NA                  NA   SFEI Zhu et. al 2021      marine
## 214                   NA                  NA   SFEI Zhu et. al 2021      marine
## 215                   NA                  NA   SFEI Zhu et. al 2021      marine
## 216                   NA                  NA   SFEI Zhu et. al 2021      marine
## 217                   NA                  NA   SFEI Zhu et. al 2021      marine
## 218                   NA                  NA   SFEI Zhu et. al 2021      marine
## 219                   NA                  NA   SFEI Zhu et. al 2021      marine
## 220                   NA                  NA   SFEI Zhu et. al 2021      marine
## 221                   NA                  NA   SFEI Zhu et. al 2021      marine
## 222                   NA                  NA   SFEI Zhu et. al 2021      marine
## 223                   NA                  NA   SFEI Zhu et. al 2021      marine
## 224                   NA                  NA   SFEI Zhu et. al 2021      marine
## 225                   NA                  NA   SFEI Zhu et. al 2021      marine
## 226                   NA                  NA   SFEI Zhu et. al 2021      marine
## 227                   NA                  NA   SFEI Zhu et. al 2021      marine
## 228                   NA                  NA   SFEI Zhu et. al 2021      marine
## 229                   NA                  NA   SFEI Zhu et. al 2021      marine
## 230                   NA                  NA   SFEI Zhu et. al 2021      marine
## 231                   NA                  NA   SFEI Zhu et. al 2021      marine
## 232                   NA                  NA   SFEI Zhu et. al 2021      marine
## 233                   NA                  NA   SFEI Zhu et. al 2021      marine
## 234                   NA                  NA   SFEI Zhu et. al 2021      marine
## 235                   NA                  NA   SFEI Zhu et. al 2021      marine
## 236                   NA                  NA   SFEI Zhu et. al 2021      marine
## 237                   NA                  NA   SFEI Zhu et. al 2021      marine
## 238                   NA                  NA   SFEI Zhu et. al 2021      marine
## 239                   NA                  NA   SFEI Zhu et. al 2021      marine
## 240                   NA                  NA   SFEI Zhu et. al 2021      marine
## 241                   NA                  NA   SFEI Zhu et. al 2021      marine
## 242                   NA                  NA   SFEI Zhu et. al 2021      marine
## 243                   NA                  NA   SFEI Zhu et. al 2021      marine
## 244                   NA                  NA   SFEI Zhu et. al 2021      marine
## 245                   NA                  NA   SFEI Zhu et. al 2021      marine
## 246                   NA                  NA   SFEI Zhu et. al 2021      marine
## 247                   NA                  NA   SFEI Zhu et. al 2021      marine
## 248                   NA                  NA   SFEI Zhu et. al 2021      marine
## 249                   NA                  NA   SFEI Zhu et. al 2021      marine
## 250                   NA                  NA   SFEI Zhu et. al 2021      marine
## 251                   NA                  NA   SFEI Zhu et. al 2021      marine
## 252                   NA                  NA   SFEI Zhu et. al 2021      marine
## 253                   NA                  NA   SFEI Zhu et. al 2021      marine
## 254                   NA                  NA   SFEI Zhu et. al 2021      marine
## 255                   NA                  NA   SFEI Zhu et. al 2021      marine
## 256                   NA                  NA   SFEI Zhu et. al 2021      marine
## 257                   NA                  NA   SFEI Zhu et. al 2021      marine
## 258                   NA                  NA   SFEI Zhu et. al 2021      marine
## 259                   NA                  NA   SFEI Zhu et. al 2021      marine
## 260                   NA                  NA   SFEI Zhu et. al 2021      marine
## 261                   NA                  NA   SFEI Zhu et. al 2021      marine
## 262                   NA                  NA   SFEI Zhu et. al 2021      marine
## 263                   NA                  NA   SFEI Zhu et. al 2021      marine
## 264                   NA                  NA   SFEI Zhu et. al 2021      marine
## 265                   NA                  NA   SFEI Zhu et. al 2021      marine
## 266                   NA                  NA   SFEI Zhu et. al 2021      marine
## 267                   NA                  NA   SFEI Zhu et. al 2021      marine
## 268                   NA                  NA   SFEI Zhu et. al 2021      marine
## 269                   NA                  NA   SFEI Zhu et. al 2021      marine
## 270                   NA                  NA   SFEI Zhu et. al 2021      marine
## 271                   NA                  NA   SFEI Zhu et. al 2021      marine
## 272                   NA                  NA   SFEI Zhu et. al 2021      marine
## 273                   NA                  NA   SFEI Zhu et. al 2021      marine
## 274                   NA                  NA   SFEI Zhu et. al 2021      marine
## 275                   NA                  NA   SFEI Zhu et. al 2021      marine
## 276                   NA                  NA   SFEI Zhu et. al 2021      marine
## 277                   NA                  NA   SFEI Zhu et. al 2021      marine
## 278                   NA                  NA   SFEI Zhu et. al 2021      marine
## 279                   NA                  NA   SFEI Zhu et. al 2021      marine
## 280                   NA                  NA   SFEI Zhu et. al 2021      marine
## 281                   NA                  NA   SFEI Zhu et. al 2021      marine
## 282                   NA                  NA   SFEI Zhu et. al 2021      marine
## 283                   NA                  NA   SFEI Zhu et. al 2021      marine
## 284                   NA                  NA   SFEI Zhu et. al 2021      marine
## 285                   NA                  NA   SFEI Zhu et. al 2021      marine
## 286                   NA                  NA   SFEI Zhu et. al 2021      marine
## 287                   NA                  NA   SFEI Zhu et. al 2021      marine
## 288                   NA                  NA   SFEI Zhu et. al 2021      marine
## 289                   NA                  NA   SFEI Zhu et. al 2021      marine
## 290                   NA                  NA   SFEI Zhu et. al 2021      marine
## 291                   NA                  NA   SFEI Zhu et. al 2021      marine
## 292                   NA                  NA   SFEI Zhu et. al 2021      marine
## 293                   NA                  NA   SFEI Zhu et. al 2021      marine
## 294                   NA                  NA   SFEI Zhu et. al 2021      marine
## 295                   NA                  NA   SFEI Zhu et. al 2021      marine
## 296                   NA                  NA   SFEI Zhu et. al 2021      marine
## 297                   NA                  NA   SFEI Zhu et. al 2021      marine
## 298                   NA                  NA   SFEI Zhu et. al 2021      marine
## 299                   NA                  NA   SFEI Zhu et. al 2021      marine
## 300                   NA                  NA   SFEI Zhu et. al 2021      marine
## 301                   NA                  NA   SFEI Zhu et. al 2021      marine
## 302                   NA                  NA   SFEI Zhu et. al 2021      marine
## 303                   NA                  NA   SFEI Zhu et. al 2021      marine
## 304                   NA                  NA   SFEI Zhu et. al 2021      marine
## 305                   NA                  NA   SFEI Zhu et. al 2021      marine
## 306                   NA                  NA   SFEI Zhu et. al 2021      marine
## 307                   NA                  NA   SFEI Zhu et. al 2021      marine
## 308                   NA                  NA   SFEI Zhu et. al 2021      marine
##             Conc  CF.sd alpha alpha.sd alpha.n   alpha.se alpha.upper.68
## 1   4.562359e+01   5.50  1.87     0.13      22 0.02771609       1.897716
## 2   4.618339e+01   5.50  1.87     0.13      22 0.02771609       1.897716
## 3   2.015275e+02   5.50  1.87     0.13      22 0.02771609       1.897716
## 4   1.575833e+02   5.50  1.87     0.13      22 0.02771609       1.897716
## 5   1.382703e+02   5.50  1.87     0.13      22 0.02771609       1.897716
## 6   2.359551e+02   5.50  1.87     0.13      22 0.02771609       1.897716
## 7   2.815787e+02   5.50  1.87     0.13      22 0.02771609       1.897716
## 8   6.465674e+01   5.50  1.87     0.13      22 0.02771609       1.897716
## 9   3.050903e+01   5.50  1.87     0.13      22 0.02771609       1.897716
## 10  4.993404e+02   5.50  1.87     0.13      22 0.02771609       1.897716
## 11  3.459556e+02   5.50  1.87     0.13      22 0.02771609       1.897716
## 12  6.832342e+02   5.50  1.87     0.13      22 0.02771609       1.897716
## 13  3.111812e-01   7.80  1.58     0.11      20 0.02459675       1.604597
## 14  5.548192e-02   7.80  1.58     0.11      20 0.02459675       1.604597
## 15  8.577988e-01   7.80  1.58     0.11      20 0.02459675       1.604597
## 16  2.031121e-01   7.80  1.58     0.11      20 0.02459675       1.604597
## 17  1.447355e-02   7.80  1.58     0.11      20 0.02459675       1.604597
## 18  2.605238e-02   7.80  1.58     0.11      20 0.02459675       1.604597
## 19  8.973598e-02   7.80  1.58     0.11      20 0.02459675       1.604597
## 20  1.124112e-01   7.80  1.58     0.11      20 0.02459675       1.604597
## 21  1.071042e-01   7.80  1.58     0.11      20 0.02459675       1.604597
## 22  3.753473e-01   7.80  1.58     0.11      20 0.02459675       1.604597
## 23  1.785071e-02   7.80  1.58     0.11      20 0.02459675       1.604597
## 24  2.653483e-02   7.80  1.58     0.11      20 0.02459675       1.604597
## 25  5.224950e-01   7.80  1.58     0.11      20 0.02459675       1.604597
## 26  7.685453e-01   7.80  1.58     0.11      20 0.02459675       1.604597
## 27  8.761320e-01   7.80  1.58     0.11      20 0.02459675       1.604597
## 28  3.618386e-02   7.80  1.58     0.11      20 0.02459675       1.604597
## 29  3.295144e-01   7.80  1.58     0.11      20 0.02459675       1.604597
## 30            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 31            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 32            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 33            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 34            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 35            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 36            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 37            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 38            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 39            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 40            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 41            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 42            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 43            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 44            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 45            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 46            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 47            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 48            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 49            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 50            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 51            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 52            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 53            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 54            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 55            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 56            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 57            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 58            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 59            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 60            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 61            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 62            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 63            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 64            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 65            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 66            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 67            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 68            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 69            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 70            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 71            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 72            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 73            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 74            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 75            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 76            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 77            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 78            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 79            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 80            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 81            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 82            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 83            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 84            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 85            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 86            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 87            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 88            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 89            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 90            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 91            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 92            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 93            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 94            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 95            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 96            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 97            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 98            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 99            NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 100           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 101           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 102           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 103           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 104           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 105           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 106           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 107           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 108           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 109           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 110           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 111           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 112           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 113           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 114           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 115           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 116           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 117           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 118           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 119           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 120           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 121           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 122           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 123           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 124           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 125           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 126           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 127           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 128           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 129           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 130           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 131           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 132           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 133           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 134           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 135           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 136           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 137           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 138           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 139           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 140           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 141           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 142           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 143           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 144           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 145           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 146           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 147           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 148           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 149           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 150           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 151           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 152           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 153           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 154           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 155           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 156           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 157           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 158           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 159           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 160           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 161           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 162           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 163           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 164           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 165           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 166           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 167           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 168           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 169           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 170           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 171           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 172           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 173           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 174           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 175           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 176           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 177           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 178           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 179           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 180           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 181           NA   6.06  1.75     0.17      15 0.04389381       1.793894
## 182           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 183           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 184           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 185           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 186           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 187           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 188           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 189           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 190           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 191           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 192           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 193           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 194           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 195           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 196           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 197           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 198           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 199           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 200           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 201           NA  30.00  2.10     0.12      17 0.02910428       2.129104
## 202 4.269176e-02 356.70  2.00     0.15      23 0.03127716       2.031277
## 203 1.134858e+01 356.70  2.00     0.15      23 0.03127716       2.031277
## 204 8.148559e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 205 3.504437e+00 356.70  2.00     0.15      23 0.03127716       2.031277
## 206 9.484996e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 207 1.540616e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 208 8.612599e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 209 1.436671e+00 356.70  2.00     0.15      23 0.03127716       2.031277
## 210 1.353143e+00 356.70  2.00     0.15      23 0.03127716       2.031277
## 211 4.204211e+00 356.70  2.00     0.15      23 0.03127716       2.031277
## 212 8.061319e+00 356.70  2.00     0.15      23 0.03127716       2.031277
## 213 3.489588e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 214 1.031860e+02 356.70  2.00     0.15      23 0.03127716       2.031277
## 215 1.633424e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 216 3.025547e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 217 2.338766e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 218 2.580067e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 219 0.000000e+00 356.70  2.00     0.15      23 0.03127716       2.031277
## 220 4.269176e-02 356.70  2.00     0.15      23 0.03127716       2.031277
## 221 4.046437e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 222 3.712327e-02 356.70  2.00     0.15      23 0.03127716       2.031277
## 223 1.466369e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 224 2.580067e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 225 1.447808e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 226 9.280818e-03 356.70  2.00     0.15      23 0.03127716       2.031277
## 227 1.781917e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 228 1.039452e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 229 1.822753e+00 356.70  2.00     0.15      23 0.03127716       2.031277
## 230 4.937395e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 231 6.626504e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 232 4.603286e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 233 2.839930e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 234 9.577805e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 235 7.350408e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 236 5.457121e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 237 5.067327e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 238 3.526711e-02 356.70  2.00     0.15      23 0.03127716       2.031277
## 239 7.053422e-02 356.70  2.00     0.15      23 0.03127716       2.031277
## 240 1.262191e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 241 1.002328e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 242 7.053422e-02 356.70  2.00     0.15      23 0.03127716       2.031277
## 243 1.262191e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 244 4.454793e-02 356.70  2.00     0.15      23 0.03127716       2.031277
## 245 2.078903e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 246 4.380546e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 247 3.359656e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 248 4.835306e+00 356.70  2.00     0.15      23 0.03127716       2.031277
## 249 2.375889e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 250 9.058079e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 251 5.381018e+00 356.70  2.00     0.15      23 0.03127716       2.031277
## 252 2.568931e+00 356.70  2.00     0.15      23 0.03127716       2.031277
## 253 7.907257e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 254 1.095137e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 255 1.707671e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 256 1.182376e+00 356.70  2.00     0.15      23 0.03127716       2.031277
## 257 2.615335e+00 356.70  2.00     0.15      23 0.03127716       2.031277
## 258 1.503493e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 259 2.431574e-01 356.70  2.00     0.15      23 0.03127716       2.031277
## 260 1.749825e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 261 1.380975e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 262 3.753341e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 263 3.169802e+01  29.30  2.00     0.15      23 0.03127716       2.031277
## 264 9.851360e+01  29.30  2.00     0.15      23 0.03127716       2.031277
## 265 2.516882e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 266 1.174062e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 267 7.992236e+01  29.30  2.00     0.15      23 0.03127716       2.031277
## 268 1.365162e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 269 1.288136e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 270 3.322036e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 271 9.448119e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 272 1.514848e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 273 8.283292e+01  29.30  2.00     0.15      23 0.03127716       2.031277
## 274 4.378681e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 275 3.293865e+01  29.30  2.00     0.15      23 0.03127716       2.031277
## 276 0.000000e+00  29.30  2.00     0.15      23 0.03127716       2.031277
## 277 9.147636e+01  29.30  2.00     0.15      23 0.03127716       2.031277
## 278 3.582993e+01  29.30  2.00     0.15      23 0.03127716       2.031277
## 279 6.375625e+01  29.30  2.00     0.15      23 0.03127716       2.031277
## 280 1.850516e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 281 1.564586e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 282 6.461286e+01  29.30  2.00     0.15      23 0.03127716       2.031277
## 283 3.847234e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 284 1.218080e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 285 6.853797e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 286 1.203407e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 287 4.763674e+01  29.30  2.00     0.15      23 0.03127716       2.031277
## 288 1.802829e+03  29.30  2.00     0.15      23 0.03127716       2.031277
## 289 1.137449e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 290 1.112034e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 291 8.107731e+01  29.30  2.00     0.15      23 0.03127716       2.031277
## 292 2.155856e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 293 1.768368e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 294 9.475833e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 295 3.180399e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 296 5.039416e+01  29.30  2.00     0.15      23 0.03127716       2.031277
## 297 3.102608e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 298 1.689602e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 299 8.057705e+01  29.30  2.00     0.15      23 0.03127716       2.031277
## 300 1.346532e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 301 2.190670e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 302 5.014847e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 303 1.683165e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 304 1.430690e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 305 2.568209e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 306 2.647495e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 307 1.395990e+02  29.30  2.00     0.15      23 0.03127716       2.031277
## 308 2.235703e+02  29.30  2.00     0.15      23 0.03127716       2.031277
##     alpha.lower.68 alpha.upper.95 alpha.lower.95 alpha.upper.99 alpha.lower.99
## 1         1.842284       1.924324       1.815676       1.953148       1.786852
## 2         1.842284       1.924324       1.815676       1.953148       1.786852
## 3         1.842284       1.924324       1.815676       1.953148       1.786852
## 4         1.842284       1.924324       1.815676       1.953148       1.786852
## 5         1.842284       1.924324       1.815676       1.953148       1.786852
## 6         1.842284       1.924324       1.815676       1.953148       1.786852
## 7         1.842284       1.924324       1.815676       1.953148       1.786852
## 8         1.842284       1.924324       1.815676       1.953148       1.786852
## 9         1.842284       1.924324       1.815676       1.953148       1.786852
## 10        1.842284       1.924324       1.815676       1.953148       1.786852
## 11        1.842284       1.924324       1.815676       1.953148       1.786852
## 12        1.842284       1.924324       1.815676       1.953148       1.786852
## 13        1.555403       1.628210       1.531790       1.653790       1.506210
## 14        1.555403       1.628210       1.531790       1.653790       1.506210
## 15        1.555403       1.628210       1.531790       1.653790       1.506210
## 16        1.555403       1.628210       1.531790       1.653790       1.506210
## 17        1.555403       1.628210       1.531790       1.653790       1.506210
## 18        1.555403       1.628210       1.531790       1.653790       1.506210
## 19        1.555403       1.628210       1.531790       1.653790       1.506210
## 20        1.555403       1.628210       1.531790       1.653790       1.506210
## 21        1.555403       1.628210       1.531790       1.653790       1.506210
## 22        1.555403       1.628210       1.531790       1.653790       1.506210
## 23        1.555403       1.628210       1.531790       1.653790       1.506210
## 24        1.555403       1.628210       1.531790       1.653790       1.506210
## 25        1.555403       1.628210       1.531790       1.653790       1.506210
## 26        1.555403       1.628210       1.531790       1.653790       1.506210
## 27        1.555403       1.628210       1.531790       1.653790       1.506210
## 28        1.555403       1.628210       1.531790       1.653790       1.506210
## 29        1.555403       1.628210       1.531790       1.653790       1.506210
## 30        1.706106       1.836032       1.663968       1.881681       1.618319
## 31        1.706106       1.836032       1.663968       1.881681       1.618319
## 32        1.706106       1.836032       1.663968       1.881681       1.618319
## 33        1.706106       1.836032       1.663968       1.881681       1.618319
## 34        1.706106       1.836032       1.663968       1.881681       1.618319
## 35        1.706106       1.836032       1.663968       1.881681       1.618319
## 36        1.706106       1.836032       1.663968       1.881681       1.618319
## 37        1.706106       1.836032       1.663968       1.881681       1.618319
## 38        1.706106       1.836032       1.663968       1.881681       1.618319
## 39        1.706106       1.836032       1.663968       1.881681       1.618319
## 40        1.706106       1.836032       1.663968       1.881681       1.618319
## 41        1.706106       1.836032       1.663968       1.881681       1.618319
## 42        1.706106       1.836032       1.663968       1.881681       1.618319
## 43        1.706106       1.836032       1.663968       1.881681       1.618319
## 44        1.706106       1.836032       1.663968       1.881681       1.618319
## 45        1.706106       1.836032       1.663968       1.881681       1.618319
## 46        1.706106       1.836032       1.663968       1.881681       1.618319
## 47        1.706106       1.836032       1.663968       1.881681       1.618319
## 48        1.706106       1.836032       1.663968       1.881681       1.618319
## 49        1.706106       1.836032       1.663968       1.881681       1.618319
## 50        1.706106       1.836032       1.663968       1.881681       1.618319
## 51        1.706106       1.836032       1.663968       1.881681       1.618319
## 52        1.706106       1.836032       1.663968       1.881681       1.618319
## 53        1.706106       1.836032       1.663968       1.881681       1.618319
## 54        1.706106       1.836032       1.663968       1.881681       1.618319
## 55        1.706106       1.836032       1.663968       1.881681       1.618319
## 56        1.706106       1.836032       1.663968       1.881681       1.618319
## 57        1.706106       1.836032       1.663968       1.881681       1.618319
## 58        1.706106       1.836032       1.663968       1.881681       1.618319
## 59        1.706106       1.836032       1.663968       1.881681       1.618319
## 60        1.706106       1.836032       1.663968       1.881681       1.618319
## 61        1.706106       1.836032       1.663968       1.881681       1.618319
## 62        1.706106       1.836032       1.663968       1.881681       1.618319
## 63        1.706106       1.836032       1.663968       1.881681       1.618319
## 64        1.706106       1.836032       1.663968       1.881681       1.618319
## 65        1.706106       1.836032       1.663968       1.881681       1.618319
## 66        1.706106       1.836032       1.663968       1.881681       1.618319
## 67        1.706106       1.836032       1.663968       1.881681       1.618319
## 68        1.706106       1.836032       1.663968       1.881681       1.618319
## 69        1.706106       1.836032       1.663968       1.881681       1.618319
## 70        1.706106       1.836032       1.663968       1.881681       1.618319
## 71        1.706106       1.836032       1.663968       1.881681       1.618319
## 72        1.706106       1.836032       1.663968       1.881681       1.618319
## 73        1.706106       1.836032       1.663968       1.881681       1.618319
## 74        1.706106       1.836032       1.663968       1.881681       1.618319
## 75        1.706106       1.836032       1.663968       1.881681       1.618319
## 76        1.706106       1.836032       1.663968       1.881681       1.618319
## 77        1.706106       1.836032       1.663968       1.881681       1.618319
## 78        1.706106       1.836032       1.663968       1.881681       1.618319
## 79        1.706106       1.836032       1.663968       1.881681       1.618319
## 80        1.706106       1.836032       1.663968       1.881681       1.618319
## 81        1.706106       1.836032       1.663968       1.881681       1.618319
## 82        1.706106       1.836032       1.663968       1.881681       1.618319
## 83        1.706106       1.836032       1.663968       1.881681       1.618319
## 84        1.706106       1.836032       1.663968       1.881681       1.618319
## 85        1.706106       1.836032       1.663968       1.881681       1.618319
## 86        1.706106       1.836032       1.663968       1.881681       1.618319
## 87        1.706106       1.836032       1.663968       1.881681       1.618319
## 88        1.706106       1.836032       1.663968       1.881681       1.618319
## 89        1.706106       1.836032       1.663968       1.881681       1.618319
## 90        1.706106       1.836032       1.663968       1.881681       1.618319
## 91        1.706106       1.836032       1.663968       1.881681       1.618319
## 92        1.706106       1.836032       1.663968       1.881681       1.618319
## 93        1.706106       1.836032       1.663968       1.881681       1.618319
## 94        1.706106       1.836032       1.663968       1.881681       1.618319
## 95        1.706106       1.836032       1.663968       1.881681       1.618319
## 96        1.706106       1.836032       1.663968       1.881681       1.618319
## 97        1.706106       1.836032       1.663968       1.881681       1.618319
## 98        1.706106       1.836032       1.663968       1.881681       1.618319
## 99        1.706106       1.836032       1.663968       1.881681       1.618319
## 100       1.706106       1.836032       1.663968       1.881681       1.618319
## 101       1.706106       1.836032       1.663968       1.881681       1.618319
## 102       1.706106       1.836032       1.663968       1.881681       1.618319
## 103       1.706106       1.836032       1.663968       1.881681       1.618319
## 104       1.706106       1.836032       1.663968       1.881681       1.618319
## 105       1.706106       1.836032       1.663968       1.881681       1.618319
## 106       1.706106       1.836032       1.663968       1.881681       1.618319
## 107       1.706106       1.836032       1.663968       1.881681       1.618319
## 108       1.706106       1.836032       1.663968       1.881681       1.618319
## 109       1.706106       1.836032       1.663968       1.881681       1.618319
## 110       1.706106       1.836032       1.663968       1.881681       1.618319
## 111       1.706106       1.836032       1.663968       1.881681       1.618319
## 112       1.706106       1.836032       1.663968       1.881681       1.618319
## 113       1.706106       1.836032       1.663968       1.881681       1.618319
## 114       1.706106       1.836032       1.663968       1.881681       1.618319
## 115       1.706106       1.836032       1.663968       1.881681       1.618319
## 116       1.706106       1.836032       1.663968       1.881681       1.618319
## 117       1.706106       1.836032       1.663968       1.881681       1.618319
## 118       1.706106       1.836032       1.663968       1.881681       1.618319
## 119       1.706106       1.836032       1.663968       1.881681       1.618319
## 120       1.706106       1.836032       1.663968       1.881681       1.618319
## 121       1.706106       1.836032       1.663968       1.881681       1.618319
## 122       1.706106       1.836032       1.663968       1.881681       1.618319
## 123       1.706106       1.836032       1.663968       1.881681       1.618319
## 124       1.706106       1.836032       1.663968       1.881681       1.618319
## 125       1.706106       1.836032       1.663968       1.881681       1.618319
## 126       1.706106       1.836032       1.663968       1.881681       1.618319
## 127       1.706106       1.836032       1.663968       1.881681       1.618319
## 128       1.706106       1.836032       1.663968       1.881681       1.618319
## 129       1.706106       1.836032       1.663968       1.881681       1.618319
## 130       1.706106       1.836032       1.663968       1.881681       1.618319
## 131       1.706106       1.836032       1.663968       1.881681       1.618319
## 132       1.706106       1.836032       1.663968       1.881681       1.618319
## 133       1.706106       1.836032       1.663968       1.881681       1.618319
## 134       1.706106       1.836032       1.663968       1.881681       1.618319
## 135       1.706106       1.836032       1.663968       1.881681       1.618319
## 136       1.706106       1.836032       1.663968       1.881681       1.618319
## 137       1.706106       1.836032       1.663968       1.881681       1.618319
## 138       1.706106       1.836032       1.663968       1.881681       1.618319
## 139       1.706106       1.836032       1.663968       1.881681       1.618319
## 140       1.706106       1.836032       1.663968       1.881681       1.618319
## 141       1.706106       1.836032       1.663968       1.881681       1.618319
## 142       1.706106       1.836032       1.663968       1.881681       1.618319
## 143       1.706106       1.836032       1.663968       1.881681       1.618319
## 144       1.706106       1.836032       1.663968       1.881681       1.618319
## 145       1.706106       1.836032       1.663968       1.881681       1.618319
## 146       1.706106       1.836032       1.663968       1.881681       1.618319
## 147       1.706106       1.836032       1.663968       1.881681       1.618319
## 148       1.706106       1.836032       1.663968       1.881681       1.618319
## 149       1.706106       1.836032       1.663968       1.881681       1.618319
## 150       1.706106       1.836032       1.663968       1.881681       1.618319
## 151       1.706106       1.836032       1.663968       1.881681       1.618319
## 152       1.706106       1.836032       1.663968       1.881681       1.618319
## 153       1.706106       1.836032       1.663968       1.881681       1.618319
## 154       1.706106       1.836032       1.663968       1.881681       1.618319
## 155       1.706106       1.836032       1.663968       1.881681       1.618319
## 156       1.706106       1.836032       1.663968       1.881681       1.618319
## 157       1.706106       1.836032       1.663968       1.881681       1.618319
## 158       1.706106       1.836032       1.663968       1.881681       1.618319
## 159       1.706106       1.836032       1.663968       1.881681       1.618319
## 160       1.706106       1.836032       1.663968       1.881681       1.618319
## 161       1.706106       1.836032       1.663968       1.881681       1.618319
## 162       1.706106       1.836032       1.663968       1.881681       1.618319
## 163       1.706106       1.836032       1.663968       1.881681       1.618319
## 164       1.706106       1.836032       1.663968       1.881681       1.618319
## 165       1.706106       1.836032       1.663968       1.881681       1.618319
## 166       1.706106       1.836032       1.663968       1.881681       1.618319
## 167       1.706106       1.836032       1.663968       1.881681       1.618319
## 168       1.706106       1.836032       1.663968       1.881681       1.618319
## 169       1.706106       1.836032       1.663968       1.881681       1.618319
## 170       1.706106       1.836032       1.663968       1.881681       1.618319
## 171       1.706106       1.836032       1.663968       1.881681       1.618319
## 172       1.706106       1.836032       1.663968       1.881681       1.618319
## 173       1.706106       1.836032       1.663968       1.881681       1.618319
## 174       1.706106       1.836032       1.663968       1.881681       1.618319
## 175       1.706106       1.836032       1.663968       1.881681       1.618319
## 176       1.706106       1.836032       1.663968       1.881681       1.618319
## 177       1.706106       1.836032       1.663968       1.881681       1.618319
## 178       1.706106       1.836032       1.663968       1.881681       1.618319
## 179       1.706106       1.836032       1.663968       1.881681       1.618319
## 180       1.706106       1.836032       1.663968       1.881681       1.618319
## 181       1.706106       1.836032       1.663968       1.881681       1.618319
## 182       2.070896       2.157044       2.042956       2.187313       2.012687
## 183       2.070896       2.157044       2.042956       2.187313       2.012687
## 184       2.070896       2.157044       2.042956       2.187313       2.012687
## 185       2.070896       2.157044       2.042956       2.187313       2.012687
## 186       2.070896       2.157044       2.042956       2.187313       2.012687
## 187       2.070896       2.157044       2.042956       2.187313       2.012687
## 188       2.070896       2.157044       2.042956       2.187313       2.012687
## 189       2.070896       2.157044       2.042956       2.187313       2.012687
## 190       2.070896       2.157044       2.042956       2.187313       2.012687
## 191       2.070896       2.157044       2.042956       2.187313       2.012687
## 192       2.070896       2.157044       2.042956       2.187313       2.012687
## 193       2.070896       2.157044       2.042956       2.187313       2.012687
## 194       2.070896       2.157044       2.042956       2.187313       2.012687
## 195       2.070896       2.157044       2.042956       2.187313       2.012687
## 196       2.070896       2.157044       2.042956       2.187313       2.012687
## 197       2.070896       2.157044       2.042956       2.187313       2.012687
## 198       2.070896       2.157044       2.042956       2.187313       2.012687
## 199       2.070896       2.157044       2.042956       2.187313       2.012687
## 200       2.070896       2.157044       2.042956       2.187313       2.012687
## 201       2.070896       2.157044       2.042956       2.187313       2.012687
## 202       1.968723       2.061303       1.938697       2.093831       1.906169
## 203       1.968723       2.061303       1.938697       2.093831       1.906169
## 204       1.968723       2.061303       1.938697       2.093831       1.906169
## 205       1.968723       2.061303       1.938697       2.093831       1.906169
## 206       1.968723       2.061303       1.938697       2.093831       1.906169
## 207       1.968723       2.061303       1.938697       2.093831       1.906169
## 208       1.968723       2.061303       1.938697       2.093831       1.906169
## 209       1.968723       2.061303       1.938697       2.093831       1.906169
## 210       1.968723       2.061303       1.938697       2.093831       1.906169
## 211       1.968723       2.061303       1.938697       2.093831       1.906169
## 212       1.968723       2.061303       1.938697       2.093831       1.906169
## 213       1.968723       2.061303       1.938697       2.093831       1.906169
## 214       1.968723       2.061303       1.938697       2.093831       1.906169
## 215       1.968723       2.061303       1.938697       2.093831       1.906169
## 216       1.968723       2.061303       1.938697       2.093831       1.906169
## 217       1.968723       2.061303       1.938697       2.093831       1.906169
## 218       1.968723       2.061303       1.938697       2.093831       1.906169
## 219       1.968723       2.061303       1.938697       2.093831       1.906169
## 220       1.968723       2.061303       1.938697       2.093831       1.906169
## 221       1.968723       2.061303       1.938697       2.093831       1.906169
## 222       1.968723       2.061303       1.938697       2.093831       1.906169
## 223       1.968723       2.061303       1.938697       2.093831       1.906169
## 224       1.968723       2.061303       1.938697       2.093831       1.906169
## 225       1.968723       2.061303       1.938697       2.093831       1.906169
## 226       1.968723       2.061303       1.938697       2.093831       1.906169
## 227       1.968723       2.061303       1.938697       2.093831       1.906169
## 228       1.968723       2.061303       1.938697       2.093831       1.906169
## 229       1.968723       2.061303       1.938697       2.093831       1.906169
## 230       1.968723       2.061303       1.938697       2.093831       1.906169
## 231       1.968723       2.061303       1.938697       2.093831       1.906169
## 232       1.968723       2.061303       1.938697       2.093831       1.906169
## 233       1.968723       2.061303       1.938697       2.093831       1.906169
## 234       1.968723       2.061303       1.938697       2.093831       1.906169
## 235       1.968723       2.061303       1.938697       2.093831       1.906169
## 236       1.968723       2.061303       1.938697       2.093831       1.906169
## 237       1.968723       2.061303       1.938697       2.093831       1.906169
## 238       1.968723       2.061303       1.938697       2.093831       1.906169
## 239       1.968723       2.061303       1.938697       2.093831       1.906169
## 240       1.968723       2.061303       1.938697       2.093831       1.906169
## 241       1.968723       2.061303       1.938697       2.093831       1.906169
## 242       1.968723       2.061303       1.938697       2.093831       1.906169
## 243       1.968723       2.061303       1.938697       2.093831       1.906169
## 244       1.968723       2.061303       1.938697       2.093831       1.906169
## 245       1.968723       2.061303       1.938697       2.093831       1.906169
## 246       1.968723       2.061303       1.938697       2.093831       1.906169
## 247       1.968723       2.061303       1.938697       2.093831       1.906169
## 248       1.968723       2.061303       1.938697       2.093831       1.906169
## 249       1.968723       2.061303       1.938697       2.093831       1.906169
## 250       1.968723       2.061303       1.938697       2.093831       1.906169
## 251       1.968723       2.061303       1.938697       2.093831       1.906169
## 252       1.968723       2.061303       1.938697       2.093831       1.906169
## 253       1.968723       2.061303       1.938697       2.093831       1.906169
## 254       1.968723       2.061303       1.938697       2.093831       1.906169
## 255       1.968723       2.061303       1.938697       2.093831       1.906169
## 256       1.968723       2.061303       1.938697       2.093831       1.906169
## 257       1.968723       2.061303       1.938697       2.093831       1.906169
## 258       1.968723       2.061303       1.938697       2.093831       1.906169
## 259       1.968723       2.061303       1.938697       2.093831       1.906169
## 260       1.968723       2.061303       1.938697       2.093831       1.906169
## 261       1.968723       2.061303       1.938697       2.093831       1.906169
## 262       1.968723       2.061303       1.938697       2.093831       1.906169
## 263       1.968723       2.061303       1.938697       2.093831       1.906169
## 264       1.968723       2.061303       1.938697       2.093831       1.906169
## 265       1.968723       2.061303       1.938697       2.093831       1.906169
## 266       1.968723       2.061303       1.938697       2.093831       1.906169
## 267       1.968723       2.061303       1.938697       2.093831       1.906169
## 268       1.968723       2.061303       1.938697       2.093831       1.906169
## 269       1.968723       2.061303       1.938697       2.093831       1.906169
## 270       1.968723       2.061303       1.938697       2.093831       1.906169
## 271       1.968723       2.061303       1.938697       2.093831       1.906169
## 272       1.968723       2.061303       1.938697       2.093831       1.906169
## 273       1.968723       2.061303       1.938697       2.093831       1.906169
## 274       1.968723       2.061303       1.938697       2.093831       1.906169
## 275       1.968723       2.061303       1.938697       2.093831       1.906169
## 276       1.968723       2.061303       1.938697       2.093831       1.906169
## 277       1.968723       2.061303       1.938697       2.093831       1.906169
## 278       1.968723       2.061303       1.938697       2.093831       1.906169
## 279       1.968723       2.061303       1.938697       2.093831       1.906169
## 280       1.968723       2.061303       1.938697       2.093831       1.906169
## 281       1.968723       2.061303       1.938697       2.093831       1.906169
## 282       1.968723       2.061303       1.938697       2.093831       1.906169
## 283       1.968723       2.061303       1.938697       2.093831       1.906169
## 284       1.968723       2.061303       1.938697       2.093831       1.906169
## 285       1.968723       2.061303       1.938697       2.093831       1.906169
## 286       1.968723       2.061303       1.938697       2.093831       1.906169
## 287       1.968723       2.061303       1.938697       2.093831       1.906169
## 288       1.968723       2.061303       1.938697       2.093831       1.906169
## 289       1.968723       2.061303       1.938697       2.093831       1.906169
## 290       1.968723       2.061303       1.938697       2.093831       1.906169
## 291       1.968723       2.061303       1.938697       2.093831       1.906169
## 292       1.968723       2.061303       1.938697       2.093831       1.906169
## 293       1.968723       2.061303       1.938697       2.093831       1.906169
## 294       1.968723       2.061303       1.938697       2.093831       1.906169
## 295       1.968723       2.061303       1.938697       2.093831       1.906169
## 296       1.968723       2.061303       1.938697       2.093831       1.906169
## 297       1.968723       2.061303       1.938697       2.093831       1.906169
## 298       1.968723       2.061303       1.938697       2.093831       1.906169
## 299       1.968723       2.061303       1.938697       2.093831       1.906169
## 300       1.968723       2.061303       1.938697       2.093831       1.906169
## 301       1.968723       2.061303       1.938697       2.093831       1.906169
## 302       1.968723       2.061303       1.938697       2.093831       1.906169
## 303       1.968723       2.061303       1.938697       2.093831       1.906169
## 304       1.968723       2.061303       1.938697       2.093831       1.906169
## 305       1.968723       2.061303       1.938697       2.093831       1.906169
## 306       1.968723       2.061303       1.938697       2.093831       1.906169
## 307       1.968723       2.061303       1.938697       2.093831       1.906169
## 308       1.968723       2.061303       1.938697       2.093831       1.906169
##      alpha.rsd CF.upper.95 CF.lower.95 conc.upper.95 conc.lower.95     CF.rsd
## 1   0.01482144    62.16982   57.573208  2.178489e+02  2.017420e+02 0.09186339
## 2   0.01482144    62.16982   57.573208  2.205219e+02  2.042174e+02 0.09186339
## 3   0.01482144    62.16982   57.573208  9.622775e+02  8.911303e+02 0.09186339
## 4   0.01482144    62.16982   57.573208  7.524476e+02  6.968144e+02 0.09186339
## 5   0.01482144    62.16982   57.573208  6.602293e+02  6.114144e+02 0.09186339
## 6   0.01482144    62.16982   57.573208  1.126667e+03  1.043365e+03 0.09186339
## 7   0.01482144    62.16982   57.573208  1.344516e+03  1.245107e+03 0.09186339
## 8   0.01482144    62.16982   57.573208  3.087307e+02  2.859043e+02 0.09186339
## 9   0.01482144    62.16982   57.573208  1.456781e+02  1.349072e+02 0.09186339
## 10  0.01482144    62.16982   57.573208  2.384310e+03  2.208023e+03 0.09186339
## 11  0.01482144    62.16982   57.573208  1.651910e+03  1.529774e+03 0.09186339
## 12  0.01482144    62.16982   57.573208  3.262388e+03  3.021179e+03 0.09186339
## 13  0.01556756    20.44620   13.609200  1.718212e+00  1.143659e+00 0.45807712
## 14  0.01556756    20.44620   13.609200  3.063478e-01  2.039082e-01 0.45807712
## 15  0.01556756    20.44620   13.609200  4.736404e+00  3.152599e+00 0.45807712
## 16  0.01556756    20.44620   13.609200  1.121499e+00  7.464814e-01 0.45807712
## 17  0.01556756    20.44620   13.609200  7.991682e-02  5.319345e-02 0.45807712
## 18  0.01556756    20.44620   13.609200  1.438503e-01  9.574821e-02 0.45807712
## 19  0.01556756    20.44620   13.609200  4.954843e-01  3.297994e-01 0.45807712
## 20  0.01556756    20.44620   13.609200  6.206873e-01  4.131358e-01 0.45807712
## 21  0.01556756    20.44620   13.609200  5.913845e-01  3.936315e-01 0.45807712
## 22  0.01556756    20.44620   13.609200  2.072510e+00  1.379484e+00 0.45807712
## 23  0.01556756    20.44620   13.609200  9.856408e-02  6.560526e-02 0.45807712
## 24  0.01556756    20.44620   13.609200  1.465142e-01  9.752133e-02 0.45807712
## 25  0.01556756    20.44620   13.609200  2.884997e+00  1.920284e+00 0.45807712
## 26  0.01556756    20.44620   13.609200  4.243583e+00  2.824572e+00 0.45807712
## 27  0.01556756    20.44620   13.609200  4.837632e+00  3.219977e+00 0.45807712
## 28  0.01556756    20.44620   13.609200  1.997921e-01  1.329836e-01 0.45807712
## 29  0.01556756    20.44620   13.609200  1.819440e+00  1.211038e+00 0.45807712
## 30  0.02508218    14.44221    8.308646  5.257687e+01  3.024763e+01 0.53272715
## 31  0.02508218    14.44221    8.308646  1.429779e+01  8.225560e+00 0.53272715
## 32  0.02508218    14.44221    8.308646  1.884709e+00  1.084278e+00 0.53272715
## 33  0.02508218    14.44221    8.308646  2.166332e+00  1.246297e+00 0.53272715
## 34  0.02508218    14.44221    8.308646  2.014689e+00  1.159056e+00 0.53272715
## 35  0.02508218    14.44221    8.308646  7.647151e+00  4.399428e+00 0.53272715
## 36  0.02508218    14.44221    8.308646  5.199196e+00  2.991113e+00 0.53272715
## 37  0.02508218    14.44221    8.308646  9.763658e+01  5.617060e+01 0.53272715
## 38  0.02508218    14.44221    8.308646  1.733065e+01  9.970375e+00 0.53272715
## 39  0.02508218    14.44221    8.308646  2.528109e+01  1.454429e+01 0.53272715
## 40  0.02508218    14.44221    8.308646  1.241308e+01  7.141281e+00 0.53272715
## 41  0.02508218    14.44221    8.308646  1.271637e+01  7.315763e+00 0.53272715
## 42  0.02508218    14.44221    8.308646  3.134682e+01  1.803392e+01 0.53272715
## 43  0.02508218    14.44221    8.308646  3.899397e+00  2.243334e+00 0.53272715
## 44  0.02508218    14.44221    8.308646  0.000000e+00  0.000000e+00 0.53272715
## 45  0.02508218    14.44221    8.308646  0.000000e+00  0.000000e+00 0.53272715
## 46  0.02508218    14.44221    8.308646  3.248054e+00  1.868615e+00 0.53272715
## 47  0.02508218    14.44221    8.308646  2.440734e-01  1.404161e-01 0.53272715
## 48  0.02508218    14.44221    8.308646  3.379478e+00  1.944223e+00 0.53272715
## 49  0.02508218    14.44221    8.308646  1.877488e+00  1.080124e+00 0.53272715
## 50  0.02508218    14.44221    8.308646  1.026986e+01  5.908278e+00 0.53272715
## 51  0.02508218    14.44221    8.308646  7.265877e+00  4.180080e+00 0.53272715
## 52  0.02508218    14.44221    8.308646  1.389341e+01  7.992918e+00 0.53272715
## 53  0.02508218    14.44221    8.308646  1.126493e+01  6.480744e+00 0.53272715
## 54  0.02508218    14.44221    8.308646  1.026986e+01  5.908278e+00 0.53272715
## 55  0.02508218    14.44221    8.308646  6.758955e+00  3.888446e+00 0.53272715
## 56  0.02508218    14.44221    8.308646  0.000000e+00  0.000000e+00 0.53272715
## 57  0.02508218    14.44221    8.308646  3.754975e+00  2.160248e+00 0.53272715
## 58  0.02508218    14.44221    8.308646  5.012892e+00  2.883931e+00 0.53272715
## 59  0.02508218    14.44221    8.308646  3.003980e+00  1.728198e+00 0.53272715
## 60  0.02508218    14.44221    8.308646  2.121561e+00  1.220540e+00 0.53272715
## 61  0.02508218    14.44221    8.308646  3.003980e+00  1.728198e+00 0.53272715
## 62  0.02508218    14.44221    8.308646  3.003980e+00  1.728198e+00 0.53272715
## 63  0.02508218    14.44221    8.308646  1.633414e+00  9.397079e-01 0.53272715
## 64  0.02508218    14.44221    8.308646  1.188450e+01  6.837185e+00 0.53272715
## 65  0.02508218    14.44221    8.308646  2.440734e-01  1.404161e-01 0.53272715
## 66  0.02508218    14.44221    8.308646  2.891331e+01  1.663391e+01 0.53272715
## 67  0.02508218    14.44221    8.308646  2.115929e+01  1.217300e+01 0.53272715
## 68  0.02508218    14.44221    8.308646  2.140336e+01  1.231341e+01 0.53272715
## 69  0.02508218    14.44221    8.308646  6.139384e+00  3.532005e+00 0.53272715
## 70  0.02508218    14.44221    8.308646  2.127193e+01  1.223780e+01 0.53272715
## 71  0.02508218    14.44221    8.308646  3.510902e+00  2.019832e+00 0.53272715
## 72  0.02508218    14.44221    8.308646  4.505970e+00  2.592298e+00 0.53272715
## 73  0.02508218    14.44221    8.308646  1.877488e+00  1.080124e+00 0.53272715
## 74  0.02508218    14.44221    8.308646  3.375578e+01  1.941980e+01 0.53272715
## 75  0.02508218    14.44221    8.308646  2.750808e+01  1.582548e+01 0.53272715
## 76  0.02508218    14.44221    8.308646  1.191916e+01  6.857126e+00 0.53272715
## 77  0.02508218    14.44221    8.308646  2.690151e+01  1.547652e+01 0.53272715
## 78  0.02508218    14.44221    8.308646  2.850893e+01  1.640127e+01 0.53272715
## 79  0.02508218    14.44221    8.308646  1.031174e+01  5.932373e+00 0.53272715
## 80  0.02508218    14.44221    8.308646  2.729578e+01  1.570334e+01 0.53272715
## 81  0.02508218    14.44221    8.308646  4.973898e+01  2.861498e+01 0.53272715
## 82  0.02508218    14.44221    8.308646  2.001691e+01  1.151578e+01 0.53272715
## 83  0.02508218    14.44221    8.308646  5.459156e+00  3.140668e+00 0.53272715
## 84  0.02508218    14.44221    8.308646  5.316612e+01  3.058662e+01 0.53272715
## 85  0.02508218    14.44221    8.308646  5.237757e+01  3.013297e+01 0.53272715
## 86  0.02508218    14.44221    8.308646  3.357381e+01  1.931511e+01 0.53272715
## 87  0.02508218    14.44221    8.308646  7.278875e+01  4.187558e+01 0.53272715
## 88  0.02508218    14.44221    8.308646  6.165814e+01  3.547210e+01 0.53272715
## 89  0.02508218    14.44221    8.308646  4.406752e+01  2.535217e+01 0.53272715
## 90  0.02508218    14.44221    8.308646  5.377269e+01  3.093558e+01 0.53272715
## 91  0.02508218    14.44221    8.308646  2.890320e+01  1.662809e+01 0.53272715
## 92  0.02508218    14.44221    8.308646  4.085269e+01  2.350267e+01 0.53272715
## 93  0.02508218    14.44221    8.308646  4.427982e+01  2.547431e+01 0.53272715
## 94  0.02508218    14.44221    8.308646  1.065445e+02  6.129537e+01 0.53272715
## 95  0.02508218    14.44221    8.308646  6.187044e+01  3.559424e+01 0.53272715
## 96  0.02508218    14.44221    8.308646  8.531448e+01  4.908167e+01 0.53272715
## 97  0.02508218    14.44221    8.308646  3.982151e+01  2.290943e+01 0.53272715
## 98  0.02508218    14.44221    8.308646  3.982151e+01  2.290943e+01 0.53272715
## 99  0.02508218    14.44221    8.308646  1.737831e+01  9.997794e+00 0.53272715
## 100 0.02508218    14.44221    8.308646  4.367325e+01  2.512535e+01 0.53272715
## 101 0.02508218    14.44221    8.308646  4.570527e+01  2.629437e+01 0.53272715
## 102 0.02508218    14.44221    8.308646  6.651072e+01  3.826381e+01 0.53272715
## 103 0.02508218    14.44221    8.308646  2.244320e+01  1.291164e+01 0.53272715
## 104 0.02508218    14.44221    8.308646  6.550988e+01  3.768802e+01 0.53272715
## 105 0.02508218    14.44221    8.308646  1.073634e+02  6.176648e+01 0.53272715
## 106 0.02508218    14.44221    8.308646  6.833044e+01  3.931070e+01 0.53272715
## 107 0.02508218    14.44221    8.308646  2.022921e+01  1.163792e+01 0.53272715
## 108 0.02508218    14.44221    8.308646  3.739522e+01  2.151358e+01 0.53272715
## 109 0.02508218    14.44221    8.308646  5.723015e+01  3.292467e+01 0.53272715
## 110 0.02508218    14.44221    8.308646  2.547606e+01  1.465645e+01 0.53272715
## 111 0.02508218    14.44221    8.308646  1.031174e+01  5.932373e+00 0.53272715
## 112 0.02508218    14.44221    8.308646  2.307143e+01  1.327306e+01 0.53272715
## 113 0.02508218    14.44221    8.308646  1.871350e+00  1.076593e+00 0.53272715
## 114 0.02508218    14.44221    8.308646  6.331827e+00  3.642718e+00 0.53272715
## 115 0.02508218    14.44221    8.308646  1.863659e+01  1.072168e+01 0.53272715
## 116 0.02508218    14.44221    8.308646  6.152382e+00  3.539483e+00 0.53272715
## 117 0.02508218    14.44221    8.308646  4.281033e+00  2.462890e+00 0.53272715
## 118 0.02508218    14.44221    8.308646  6.998335e+00  4.026162e+00 0.53272715
## 119 0.02508218    14.44221    8.308646  1.384286e+01  7.963837e+00 0.53272715
## 120 0.02508218    14.44221    8.308646  1.871350e+00  1.076593e+00 0.53272715
## 121 0.02508218    14.44221    8.308646  4.281033e+00  2.462890e+00 0.53272715
## 122 0.02508218    14.44221    8.308646  1.143823e+01  6.580448e+00 0.53272715
## 123 0.02508218    14.44221    8.308646  5.496706e+00  3.162271e+00 0.53272715
## 124 0.02508218    14.44221    8.308646  3.177287e+00  1.827902e+00 0.53272715
## 125 0.02508218    14.44221    8.308646  5.306069e+00  3.052597e+00 0.53272715
## 126 0.02508218    14.44221    8.308646  4.089168e+01  2.352510e+01 0.53272715
## 127 0.02508218    14.44221    8.308646  1.439311e+01  8.280397e+00 0.53272715
## 128 0.02508218    14.44221    8.308646  1.080277e+01  6.214867e+00 0.53272715
## 129 0.02508218    14.44221    8.308646  1.185128e+01  6.818075e+00 0.53272715
## 130 0.02508218    14.44221    8.308646  5.941526e+00  3.418177e+00 0.53272715
## 131 0.02508218    14.44221    8.308646  1.502857e+01  8.645977e+00 0.53272715
## 132 0.02508218    14.44221    8.308646  3.218591e+01  1.851665e+01 0.53272715
## 133 0.02508218    14.44221    8.308646  8.619979e+01  4.959099e+01 0.53272715
## 134 0.02508218    14.44221    8.308646  9.913135e+01  5.703055e+01 0.53272715
## 135 0.02508218    14.44221    8.308646  1.116181e+02  6.421420e+01 0.53272715
## 136 0.02508218    14.44221    8.308646  8.578674e+01  4.935336e+01 0.53272715
## 137 0.02508218    14.44221    8.308646  7.625488e+01  4.386965e+01 0.53272715
## 138 0.02508218    14.44221    8.308646  1.783411e+02  1.026001e+02 0.53272715
## 139 0.02508218    14.44221    8.308646  5.169445e+01  2.973997e+01 0.53272715
## 140 0.02508218    14.44221    8.308646  6.713607e+01  3.862357e+01 0.53272715
## 141 0.02508218    14.44221    8.308646  8.937708e+01  5.141889e+01 0.53272715
## 142 0.02508218    14.44221    8.308646  6.754189e+01  3.885705e+01 0.53272715
## 143 0.02508218    14.44221    8.308646  2.811465e+01  1.617444e+01 0.53272715
## 144 0.02508218    14.44221    8.308646  7.300105e+01  4.199771e+01 0.53272715
## 145 0.02508218    14.44221    8.308646  2.244320e+01  1.291164e+01 0.53272715
## 146 0.02508218    14.44221    8.308646  3.721325e+01  2.140889e+01 0.53272715
## 147 0.02508218    14.44221    8.308646  2.162432e+01  1.244054e+01 0.53272715
## 148 0.02508218    14.44221    8.308646  2.283747e+01  1.313846e+01 0.53272715
## 149 0.02508218    14.44221    8.308646  2.386864e+01  1.373170e+01 0.53272715
## 150 0.02508218    14.44221    8.308646  6.460002e+00  3.716457e+00 0.53272715
## 151 0.02508218    14.44221    8.308646  5.853429e+00  3.367494e+00 0.53272715
## 152 0.02508218    14.44221    8.308646  2.386864e+01  1.373170e+01 0.53272715
## 153 0.02508218    14.44221    8.308646  4.640283e+00  2.669568e+00 0.53272715
## 154 0.02508218    14.44221    8.308646  8.492021e+00  4.885484e+00 0.53272715
## 155 0.02508218    14.44221    8.308646  2.547606e+01  1.465645e+01 0.53272715
## 156 0.02508218    14.44221    8.308646  3.760752e+01  2.163571e+01 0.53272715
## 157 0.02508218    14.44221    8.308646  1.173719e+01  6.752437e+00 0.53272715
## 158 0.02508218    14.44221    8.308646  2.690151e+01  1.547652e+01 0.53272715
## 159 0.02508218    14.44221    8.308646  1.962263e+01  1.128896e+01 0.53272715
## 160 0.02508218    14.44221    8.308646  1.373888e+01  7.904015e+00 0.53272715
## 161 0.02508218    14.44221    8.308646  8.704321e+00  5.007621e+00 0.53272715
## 162 0.02508218    14.44221    8.308646  8.441581e+01  4.856466e+01 0.53272715
## 163 0.02508218    14.44221    8.308646  3.999049e+01  2.300664e+01 0.53272715
## 164 0.02508218    14.44221    8.308646  1.131269e+02  6.508225e+01 0.53272715
## 165 0.02508218    14.44221    8.308646  4.478422e+01  2.576449e+01 0.53272715
## 166 0.02508218    14.44221    8.308646  1.025397e+01  5.899139e+00 0.53272715
## 167 0.02508218    14.44221    8.308646  1.673961e+01  9.630344e+00 0.53272715
## 168 0.02508218    14.44221    8.308646  2.255874e+01  1.297811e+01 0.53272715
## 169 0.02508218    14.44221    8.308646  2.632707e+01  1.514604e+01 0.53272715
## 170 0.02508218    14.44221    8.308646  1.999524e+01  1.150332e+01 0.53272715
## 171 0.02508218    14.44221    8.308646  2.050794e+00  1.179828e+00 0.53272715
## 172 0.02508218    14.44221    8.308646  3.843217e+01  2.211014e+01 0.53272715
## 173 0.02508218    14.44221    8.308646  2.502691e+01  1.439805e+01 0.53272715
## 174 0.02508218    14.44221    8.308646  8.016872e+00  4.612129e+00 0.53272715
## 175 0.02508218    14.44221    8.308646  4.881468e+00  2.808322e+00 0.53272715
## 176 0.02508218    14.44221    8.308646  1.201592e+01  6.912794e+00 0.53272715
## 177 0.02508218    14.44221    8.308646  1.214734e+01  6.988402e+00 0.53272715
## 178 0.02508218    14.44221    8.308646  1.877488e+00  1.080124e+00 0.53272715
## 179 0.02508218    14.44221    8.308646  7.003029e+00  4.028862e+00 0.53272715
## 180 0.02508218    14.44221    8.308646  4.261897e+00  2.451881e+00 0.53272715
## 181 0.02508218    14.44221    8.308646  1.051393e+01  6.048694e+00 0.53272715
## 182 0.01385918    80.47420   51.952006  1.301371e+04  8.401304e+03 0.45308254
## 183 0.01385918    80.47420   51.952006  4.038533e+04  2.607170e+04 0.45308254
## 184 0.01385918    80.47420   51.952006  5.704120e+04  3.682429e+04 0.45308254
## 185 0.01385918    80.47420   51.952006  4.282917e+05  2.764937e+05 0.45308254
## 186 0.01385918    80.47420   51.952006  9.669004e+04  6.242052e+04 0.45308254
## 187 0.01385918    80.47420   51.952006  1.694150e+06  1.093698e+06 0.45308254
## 188 0.01385918    80.47420   51.952006  1.467552e+05  9.474124e+04 0.45308254
## 189 0.01385918    80.47420   51.952006  2.860335e+05  1.846556e+05 0.45308254
## 190 0.01385918    80.47420   51.952006  8.849327e+04  5.712891e+04 0.45308254
## 191 0.01385918    80.47420   51.952006  2.623279e+04  1.693519e+04 0.45308254
## 192 0.01385918    80.47420   51.952006  8.370363e+02  5.403684e+02 0.45308254
## 193 0.01385918    80.47420   51.952006  9.833842e+03  6.348468e+03 0.45308254
## 194 0.01385918    80.47420   51.952006  2.835038e+05  1.830225e+05 0.45308254
## 195 0.01385918    80.47420   51.952006  2.154512e+05  1.390896e+05 0.45308254
## 196 0.01385918    80.47420   51.952006  1.736282e+04  1.120898e+04 0.45308254
## 197 0.01385918    80.47420   51.952006  3.143858e+04  2.029591e+04 0.45308254
## 198 0.01385918    80.47420   51.952006  7.645049e+03  4.935441e+03 0.45308254
## 199 0.01385918    80.47420   51.952006  4.006617e+03  2.586566e+03 0.45308254
## 200 0.01385918    80.47420   51.952006  1.449550e+03  9.357907e+02 0.45308254
## 201 0.01385918    80.47420   51.952006  3.134341e+03  2.023448e+03 0.45308254
## 202 0.01563858   502.46798  210.909780  3.890710e-02  1.633117e-02 1.00003118
## 203 0.01563858   502.46798  210.909780  1.034252e+01  4.341250e+00 1.00003118
## 204 0.01563858   502.46798  210.909780  7.426181e-01  3.117123e-01 1.00003118
## 205 0.01563858   502.46798  210.909780  3.193765e+00  1.340576e+00 1.00003118
## 206 0.01563858   502.46798  210.909780  8.644143e-01  3.628359e-01 1.00003118
## 207 0.01563858   502.46798  210.909780  1.404039e-01  5.893421e-02 1.00003118
## 208 0.01563858   502.46798  210.909780  7.849085e-01  3.294635e-01 1.00003118
## 209 0.01563858   502.46798  210.909780  1.309309e+00  5.495792e-01 1.00003118
## 210 0.01563858   502.46798  210.909780  1.233186e+00  5.176270e-01 1.00003118
## 211 0.01563858   502.46798  210.909780  3.831504e+00  1.608265e+00 1.00003118
## 212 0.01563858   502.46798  210.909780  7.346676e+00  3.083750e+00 1.00003118
## 213 0.01563858   502.46798  210.909780  3.180233e-01  1.334895e-01 1.00003118
## 214 0.01563858   502.46798  210.909780  9.403846e+01  3.947243e+01 1.00003118
## 215 0.01563858   502.46798  210.909780  1.488619e-01  6.248446e-02 1.00003118
## 216 0.01563858   502.46798  210.909780  2.757329e-01  1.157383e-01 1.00003118
## 217 0.01563858   502.46798  210.909780  2.131432e-01  8.946639e-02 1.00003118
## 218 0.01563858   502.46798  210.909780  2.351342e-01  9.869705e-02 1.00003118
## 219 0.01563858   502.46798  210.909780  0.000000e+00  0.000000e+00 1.00003118
## 220 0.01563858   502.46798  210.909780  3.890710e-02  1.633117e-02 1.00003118
## 221 0.01563858   502.46798  210.909780  3.687716e-01  1.547911e-01 1.00003118
## 222 0.01563858   502.46798  210.909780  3.383226e-02  1.420101e-02 1.00003118
## 223 0.01563858   502.46798  210.909780  1.336374e-01  5.609401e-02 1.00003118
## 224 0.01563858   502.46798  210.909780  2.351342e-01  9.869705e-02 1.00003118
## 225 0.01563858   502.46798  210.909780  1.319458e-01  5.538395e-02 1.00003118
## 226 0.01563858   502.46798  210.909780  8.458065e-03  3.550254e-03 1.00003118
## 227 0.01563858   502.46798  210.909780  1.623949e-01  6.816487e-02 1.00003118
## 228 0.01563858   502.46798  210.909780  9.473033e-02  3.976284e-02 1.00003118
## 229 0.01563858   502.46798  210.909780  1.661164e+00  6.972698e-01 1.00003118
## 230 0.01563858   502.46798  210.909780  4.499691e-01  1.888735e-01 1.00003118
## 231 0.01563858   502.46798  210.909780  6.039059e-01  2.534881e-01 1.00003118
## 232 0.01563858   502.46798  210.909780  4.195200e-01  1.760926e-01 1.00003118
## 233 0.01563858   502.46798  210.909780  2.588168e-01  1.086378e-01 1.00003118
## 234 0.01563858   502.46798  210.909780  8.728723e-01  3.663862e-01 1.00003118
## 235 0.01563858   502.46798  210.909780  6.698788e-01  2.811801e-01 1.00003118
## 236 0.01563858   502.46798  210.909780  4.973342e-01  2.087549e-01 1.00003118
## 237 0.01563858   502.46798  210.909780  4.618104e-01  1.938438e-01 1.00003118
## 238 0.01563858   502.46798  210.909780  3.214065e-02  1.349096e-02 1.00003118
## 239 0.01563858   502.46798  210.909780  6.428130e-02  2.698193e-02 1.00003118
## 240 0.01563858   502.46798  210.909780  1.150297e-01  4.828345e-02 1.00003118
## 241 0.01563858   502.46798  210.909780  9.134711e-02  3.834274e-02 1.00003118
## 242 0.01563858   502.46798  210.909780  6.428130e-02  2.698193e-02 1.00003118
## 243 0.01563858   502.46798  210.909780  1.150297e-01  4.828345e-02 1.00003118
## 244 0.01563858   502.46798  210.909780  4.059871e-02  1.704122e-02 1.00003118
## 245 0.01563858   502.46798  210.909780  1.894607e-01  7.952568e-02 1.00003118
## 246 0.01563858   502.46798  210.909780  3.992207e-01  1.675720e-01 1.00003118
## 247 0.01563858   502.46798  210.909780  3.061820e-01  1.285192e-01 1.00003118
## 248 0.01563858   502.46798  210.909780  4.406652e+00  1.849682e+00 1.00003118
## 249 0.01563858   502.46798  210.909780  2.165265e-01  9.088649e-02 1.00003118
## 250 0.01563858   502.46798  210.909780  8.255072e-01  3.465047e-01 1.00003118
## 251 0.01563858   502.46798  210.909780  4.903986e+00  2.058437e+00 1.00003118
## 252 0.01563858   502.46798  210.909780  2.341192e+00  9.827102e-01 1.00003118
## 253 0.01563858   502.46798  210.909780  7.206272e-01  3.024816e-01 1.00003118
## 254 0.01563858   502.46798  210.909780  9.980517e-02  4.189299e-02 1.00003118
## 255 0.01563858   502.46798  210.909780  1.556284e-01  6.532466e-02 1.00003118
## 256 0.01563858   502.46798  210.909780  1.077558e+00  4.523023e-01 1.00003118
## 257 0.01563858   502.46798  210.909780  2.383483e+00  1.000461e+00 1.00003118
## 258 0.01563858   502.46798  210.909780  1.370207e-01  5.751411e-02 1.00003118
## 259 0.01563858   502.46798  210.909780  2.216013e-01  9.301664e-02 1.00003118
## 260 0.01563858    62.46952   38.520384  6.171819e+02  3.805709e+02 0.58025605
## 261 0.01563858    62.46952   38.520384  4.870846e+02  3.003495e+02 0.58025605
## 262 0.01563858    62.46952   38.520384  1.323843e+03  8.163174e+02 0.58025605
## 263 0.01563858    62.46952   38.520384  1.118023e+02  6.894030e+01 0.58025605
## 264 0.01563858    62.46952   38.520384  3.474679e+02  2.142581e+02 0.58025605
## 265 0.01563858    62.46952   38.520384  8.877311e+02  5.473989e+02 0.58025605
## 266 0.01563858    62.46952   38.520384  4.141041e+02  2.553477e+02 0.58025605
## 267 0.01563858    62.46952   38.520384  2.818947e+02  1.738238e+02 0.58025605
## 268 0.01563858    62.46952   38.520384  4.815073e+02  2.969104e+02 0.58025605
## 269 0.01563858    62.46952   38.520384  4.543394e+02  2.801579e+02 0.58025605
## 270 0.01563858    62.46952   38.520384  1.171717e+03  7.225125e+02 0.58025605
## 271 0.01563858    62.46952   38.520384  3.332452e+03  2.054880e+03 0.58025605
## 272 0.01563858    62.46952   38.520384  2.930050e+02  1.806747e+02 0.58025605
## 273 0.01563858    62.46952   38.520384  1.602171e+02  9.879415e+01 0.58025605
## 274 0.01563858    62.46952   38.520384  8.469330e+02  5.222417e+02 0.58025605
## 275 0.01563858    62.46952   38.520384  6.371058e+01  3.928566e+01 0.58025605
## 276 0.01563858    62.46952   38.520384  0.000000e+00  0.000000e+00 0.58025605
## 277 0.01563858    62.46952   38.520384  1.769354e+02  1.091031e+02 0.58025605
## 278 0.01563858    62.46952   38.520384  6.930295e+01  4.273406e+01 0.58025605
## 279 0.01563858    62.46952   38.520384  1.233186e+02  7.604156e+01 0.58025605
## 280 0.01563858    62.46952   38.520384  3.579304e+02  2.207095e+02 0.58025605
## 281 0.01563858    62.46952   38.520384  6.408535e+02  3.951675e+02 0.58025605
## 282 0.01563858    62.46952   38.520384  2.646539e+02  1.631927e+02 0.58025605
## 283 0.01563858    62.46952   38.520384  1.575825e+03  9.716961e+02 0.58025605
## 284 0.01563858    62.46952   38.520384  4.989248e+02  3.076505e+02 0.58025605
## 285 0.01563858    62.46952   38.520384  1.325675e+03  8.174467e+02 0.58025605
## 286 0.01563858    62.46952   38.520384  2.327653e+02  1.435293e+02 0.58025605
## 287 0.01563858    62.46952   38.520384  9.213992e+01  5.681596e+01 0.58025605
## 288 0.01563858    62.46952   38.520384  3.487067e+03  2.150219e+03 0.58025605
## 289 0.01563858    62.46952   38.520384  2.200075e+02  1.356626e+02 0.58025605
## 290 0.01563858    62.46952   38.520384  2.150919e+02  1.326314e+02 0.58025605
## 291 0.01563858    62.46952   38.520384  1.568213e+02  9.670025e+01 0.58025605
## 292 0.01563858    62.46952   38.520384  4.169900e+02  2.571272e+02 0.58025605
## 293 0.01563858    62.46952   38.520384  3.420412e+02  2.109118e+02 0.58025605
## 294 0.01563858    62.46952   38.520384  1.832834e+03  1.130175e+03 0.58025605
## 295 0.01563858    62.46952   38.520384  6.151590e+02  3.793236e+02 0.58025605
## 296 0.01563858    62.46952   38.520384  1.290089e+02  7.955034e+01 0.58025605
## 297 0.01563858    62.46952   38.520384  7.942666e+02  4.897662e+02 0.58025605
## 298 0.01563858    62.46952   38.520384  4.325374e+02  2.667142e+02 0.58025605
## 299 0.01563858    62.46952   38.520384  2.062770e+02  1.271959e+02 0.58025605
## 300 0.01563858    62.46952   38.520384  3.447117e+02  2.125585e+02 0.58025605
## 301 0.01563858    62.46952   38.520384  5.608108e+02  3.458110e+02 0.58025605
## 302 0.01563858    62.46952   38.520384  1.283799e+03  7.916250e+02 0.58025605
## 303 0.01563858    62.46952   38.520384  4.691909e+02  2.893158e+02 0.58025605
## 304 0.01563858    62.46952   38.520384  3.988123e+02  2.459184e+02 0.58025605
## 305 0.01563858    62.46952   38.520384  7.159017e+02  4.414442e+02 0.58025605
## 306 0.01563858    62.46952   38.520384  7.380029e+02  4.550725e+02 0.58025605
## 307 0.01563858    62.46952   38.520384  3.891394e+02  2.399538e+02 0.58025605
## 308 0.01563858    62.46952   38.520384  6.232138e+02  3.842904e+02 0.58025605
##     proportion.rsd fiber.correction.rsd combined.rsd conc.combined.sd
## 1               NA            0.3031438           NA               NA
## 2               NA            0.3031438           NA               NA
## 3               NA            0.3031438           NA               NA
## 4               NA            0.3031438           NA               NA
## 5               NA            0.3031438           NA               NA
## 6               NA            0.3031438           NA               NA
## 7               NA            0.3031438           NA               NA
## 8               NA            0.3031438           NA               NA
## 9               NA            0.3031438           NA               NA
## 10              NA            0.3031438           NA               NA
## 11              NA            0.3031438           NA               NA
## 12              NA            0.3031438           NA               NA
## 13              NA            0.3031438           NA               NA
## 14              NA            0.3031438           NA               NA
## 15              NA            0.3031438           NA               NA
## 16              NA            0.3031438           NA               NA
## 17              NA            0.3031438           NA               NA
## 18              NA            0.3031438           NA               NA
## 19              NA            0.3031438           NA               NA
## 20              NA            0.3031438           NA               NA
## 21              NA            0.3031438           NA               NA
## 22              NA            0.3031438           NA               NA
## 23              NA            0.3031438           NA               NA
## 24              NA            0.3031438           NA               NA
## 25              NA            0.3031438           NA               NA
## 26              NA            0.3031438           NA               NA
## 27              NA            0.3031438           NA               NA
## 28              NA            0.3031438           NA               NA
## 29              NA            0.3031438           NA               NA
## 30              NA            0.3031438           NA               NA
## 31              NA            0.3031438           NA               NA
## 32              NA            0.3031438           NA               NA
## 33              NA            0.3031438           NA               NA
## 34              NA            0.3031438           NA               NA
## 35              NA            0.3031438           NA               NA
## 36              NA            0.3031438           NA               NA
## 37              NA            0.3031438           NA               NA
## 38              NA            0.3031438           NA               NA
## 39              NA            0.3031438           NA               NA
## 40              NA            0.3031438           NA               NA
## 41              NA            0.3031438           NA               NA
## 42              NA            0.3031438           NA               NA
## 43              NA            0.3031438           NA               NA
## 44              NA            0.3031438           NA               NA
## 45              NA            0.3031438           NA               NA
## 46              NA            0.3031438           NA               NA
## 47              NA            0.3031438           NA               NA
## 48              NA            0.3031438           NA               NA
## 49              NA            0.3031438           NA               NA
## 50              NA            0.3031438           NA               NA
## 51              NA            0.3031438           NA               NA
## 52              NA            0.3031438           NA               NA
## 53              NA            0.3031438           NA               NA
## 54              NA            0.3031438           NA               NA
## 55              NA            0.3031438           NA               NA
## 56              NA            0.3031438           NA               NA
## 57              NA            0.3031438           NA               NA
## 58              NA            0.3031438           NA               NA
## 59              NA            0.3031438           NA               NA
## 60              NA            0.3031438           NA               NA
## 61              NA            0.3031438           NA               NA
## 62              NA            0.3031438           NA               NA
## 63              NA            0.3031438           NA               NA
## 64              NA            0.3031438           NA               NA
## 65              NA            0.3031438           NA               NA
## 66              NA            0.3031438           NA               NA
## 67              NA            0.3031438           NA               NA
## 68              NA            0.3031438           NA               NA
## 69              NA            0.3031438           NA               NA
## 70              NA            0.3031438           NA               NA
## 71              NA            0.3031438           NA               NA
## 72              NA            0.3031438           NA               NA
## 73              NA            0.3031438           NA               NA
## 74              NA            0.3031438           NA               NA
## 75              NA            0.3031438           NA               NA
## 76              NA            0.3031438           NA               NA
## 77              NA            0.3031438           NA               NA
## 78              NA            0.3031438           NA               NA
## 79              NA            0.3031438           NA               NA
## 80              NA            0.3031438           NA               NA
## 81              NA            0.3031438           NA               NA
## 82              NA            0.3031438           NA               NA
## 83              NA            0.3031438           NA               NA
## 84              NA            0.3031438           NA               NA
## 85              NA            0.3031438           NA               NA
## 86              NA            0.3031438           NA               NA
## 87              NA            0.3031438           NA               NA
## 88              NA            0.3031438           NA               NA
## 89              NA            0.3031438           NA               NA
## 90              NA            0.3031438           NA               NA
## 91              NA            0.3031438           NA               NA
## 92              NA            0.3031438           NA               NA
## 93              NA            0.3031438           NA               NA
## 94              NA            0.3031438           NA               NA
## 95              NA            0.3031438           NA               NA
## 96              NA            0.3031438           NA               NA
## 97              NA            0.3031438           NA               NA
## 98              NA            0.3031438           NA               NA
## 99              NA            0.3031438           NA               NA
## 100             NA            0.3031438           NA               NA
## 101             NA            0.3031438           NA               NA
## 102             NA            0.3031438           NA               NA
## 103             NA            0.3031438           NA               NA
## 104             NA            0.3031438           NA               NA
## 105             NA            0.3031438           NA               NA
## 106             NA            0.3031438           NA               NA
## 107             NA            0.3031438           NA               NA
## 108             NA            0.3031438           NA               NA
## 109             NA            0.3031438           NA               NA
## 110             NA            0.3031438           NA               NA
## 111             NA            0.3031438           NA               NA
## 112             NA            0.3031438           NA               NA
## 113             NA            0.3031438           NA               NA
## 114             NA            0.3031438           NA               NA
## 115             NA            0.3031438           NA               NA
## 116             NA            0.3031438           NA               NA
## 117             NA            0.3031438           NA               NA
## 118             NA            0.3031438           NA               NA
## 119             NA            0.3031438           NA               NA
## 120             NA            0.3031438           NA               NA
## 121             NA            0.3031438           NA               NA
## 122             NA            0.3031438           NA               NA
## 123             NA            0.3031438           NA               NA
## 124             NA            0.3031438           NA               NA
## 125             NA            0.3031438           NA               NA
## 126             NA            0.3031438           NA               NA
## 127             NA            0.3031438           NA               NA
## 128             NA            0.3031438           NA               NA
## 129             NA            0.3031438           NA               NA
## 130             NA            0.3031438           NA               NA
## 131             NA            0.3031438           NA               NA
## 132             NA            0.3031438           NA               NA
## 133             NA            0.3031438           NA               NA
## 134             NA            0.3031438           NA               NA
## 135             NA            0.3031438           NA               NA
## 136             NA            0.3031438           NA               NA
## 137             NA            0.3031438           NA               NA
## 138             NA            0.3031438           NA               NA
## 139             NA            0.3031438           NA               NA
## 140             NA            0.3031438           NA               NA
## 141             NA            0.3031438           NA               NA
## 142             NA            0.3031438           NA               NA
## 143             NA            0.3031438           NA               NA
## 144             NA            0.3031438           NA               NA
## 145             NA            0.3031438           NA               NA
## 146             NA            0.3031438           NA               NA
## 147             NA            0.3031438           NA               NA
## 148             NA            0.3031438           NA               NA
## 149             NA            0.3031438           NA               NA
## 150             NA            0.3031438           NA               NA
## 151             NA            0.3031438           NA               NA
## 152             NA            0.3031438           NA               NA
## 153             NA            0.3031438           NA               NA
## 154             NA            0.3031438           NA               NA
## 155             NA            0.3031438           NA               NA
## 156             NA            0.3031438           NA               NA
## 157             NA            0.3031438           NA               NA
## 158             NA            0.3031438           NA               NA
## 159             NA            0.3031438           NA               NA
## 160             NA            0.3031438           NA               NA
## 161             NA            0.3031438           NA               NA
## 162             NA            0.3031438           NA               NA
## 163             NA            0.3031438           NA               NA
## 164             NA            0.3031438           NA               NA
## 165             NA            0.3031438           NA               NA
## 166             NA            0.3031438           NA               NA
## 167             NA            0.3031438           NA               NA
## 168             NA            0.3031438           NA               NA
## 169             NA            0.3031438           NA               NA
## 170             NA            0.3031438           NA               NA
## 171             NA            0.3031438           NA               NA
## 172             NA            0.3031438           NA               NA
## 173             NA            0.3031438           NA               NA
## 174             NA            0.3031438           NA               NA
## 175             NA            0.3031438           NA               NA
## 176             NA            0.3031438           NA               NA
## 177             NA            0.3031438           NA               NA
## 178             NA            0.3031438           NA               NA
## 179             NA            0.3031438           NA               NA
## 180             NA            0.3031438           NA               NA
## 181             NA            0.3031438           NA               NA
## 182             NA            0.3031438           NA               NA
## 183             NA            0.3031438           NA               NA
## 184             NA            0.3031438           NA               NA
## 185             NA            0.3031438           NA               NA
## 186             NA            0.3031438           NA               NA
## 187             NA            0.3031438           NA               NA
## 188             NA            0.3031438           NA               NA
## 189             NA            0.3031438           NA               NA
## 190             NA            0.3031438           NA               NA
## 191             NA            0.3031438           NA               NA
## 192             NA            0.3031438           NA               NA
## 193             NA            0.3031438           NA               NA
## 194             NA            0.3031438           NA               NA
## 195             NA            0.3031438           NA               NA
## 196             NA            0.3031438           NA               NA
## 197             NA            0.3031438           NA               NA
## 198             NA            0.3031438           NA               NA
## 199             NA            0.3031438           NA               NA
## 200             NA            0.3031438           NA               NA
## 201             NA            0.3031438           NA               NA
## 202      0.3229184            0.3031438     1.093725       0.04669306
## 203      0.3229184            0.3031438     1.093725      12.41223317
## 204      0.3229184            0.3031438     1.093725       0.89122839
## 205      0.3229184            0.3031438     1.093725       3.83289111
## 206      0.3229184            0.3031438     1.093725       1.03739796
## 207      0.3229184            0.3031438     1.093725       0.16850104
## 208      0.3229184            0.3031438     1.093725       0.94198171
## 209      0.3229184            0.3031438     1.093725       1.57132294
## 210      0.3229184            0.3031438     1.093725       1.47996696
## 211      0.3229184            0.3031438     1.093725       4.59825125
## 212      0.3229184            0.3031438     1.093725       8.81686762
## 213      0.3229184            0.3031438     1.093725       0.38166500
## 214      0.3229184            0.3031438     1.093725     112.85712364
## 215      0.3229184            0.3031438     1.093725       0.17865170
## 216      0.3229184            0.3031438     1.093725       0.33091168
## 217      0.3229184            0.3031438     1.093725       0.25579676
## 218      0.3229184            0.3031438     1.093725       0.28218849
## 219      0.3229184            0.3031438     1.093725       0.00000000
## 220      0.3229184            0.3031438     1.093725       0.04669306
## 221      0.3229184            0.3031438     1.093725       0.44256899
## 222      0.3229184            0.3031438     1.093725       0.04060266
## 223      0.3229184            0.3031438     1.093725       0.16038051
## 224      0.3229184            0.3031438     1.093725       0.28218849
## 225      0.3229184            0.3031438     1.093725       0.15835037
## 226      0.3229184            0.3031438     1.093725       0.01015067
## 227      0.3229184            0.3031438     1.093725       0.19489277
## 228      0.3229184            0.3031438     1.093725       0.11368745
## 229      0.3229184            0.3031438     1.093725       1.99359061
## 230      0.3229184            0.3031438     1.093725       0.54001538
## 231      0.3229184            0.3031438     1.093725       0.72475748
## 232      0.3229184            0.3031438     1.093725       0.50347298
## 233      0.3229184            0.3031438     1.093725       0.31061035
## 234      0.3229184            0.3031438     1.093725       1.04754863
## 235      0.3229184            0.3031438     1.093725       0.80393267
## 236      0.3229184            0.3031438     1.093725       0.59685910
## 237      0.3229184            0.3031438     1.093725       0.55422631
## 238      0.3229184            0.3031438     1.093725       0.03857253
## 239      0.3229184            0.3031438     1.093725       0.07714505
## 240      0.3229184            0.3031438     1.093725       0.13804904
## 241      0.3229184            0.3031438     1.093725       0.10962718
## 242      0.3229184            0.3031438     1.093725       0.07714505
## 243      0.3229184            0.3031438     1.093725       0.13804904
## 244      0.3229184            0.3031438     1.093725       0.04872319
## 245      0.3229184            0.3031438     1.093725       0.22737490
## 246      0.3229184            0.3031438     1.093725       0.47911139
## 247      0.3229184            0.3031438     1.093725       0.36745407
## 248      0.3229184            0.3031438     1.093725       5.28849647
## 249      0.3229184            0.3031438     1.093725       0.25985702
## 250      0.3229184            0.3031438     1.093725       0.99070490
## 251      0.3229184            0.3031438     1.093725       5.88535557
## 252      0.3229184            0.3031438     1.093725       2.80970407
## 253      0.3229184            0.3031438     1.093725       0.86483666
## 254      0.3229184            0.3031438     1.093725       0.11977785
## 255      0.3229184            0.3031438     1.093725       0.18677224
## 256      0.3229184            0.3031438     1.093725       1.29319472
## 257      0.3229184            0.3031438     1.093725       2.86045740
## 258      0.3229184            0.3031438     1.093725       0.16444077
## 259      0.3229184            0.3031438     1.093725       0.26594742
## 260             NA            0.3031438           NA               NA
## 261             NA            0.3031438           NA               NA
## 262             NA            0.3031438           NA               NA
## 263             NA            0.3031438           NA               NA
## 264             NA            0.3031438           NA               NA
## 265             NA            0.3031438           NA               NA
## 266             NA            0.3031438           NA               NA
## 267             NA            0.3031438           NA               NA
## 268             NA            0.3031438           NA               NA
## 269             NA            0.3031438           NA               NA
## 270             NA            0.3031438           NA               NA
## 271             NA            0.3031438           NA               NA
## 272             NA            0.3031438           NA               NA
## 273             NA            0.3031438           NA               NA
## 274             NA            0.3031438           NA               NA
## 275             NA            0.3031438           NA               NA
## 276             NA            0.3031438           NA               NA
## 277             NA            0.3031438           NA               NA
## 278             NA            0.3031438           NA               NA
## 279             NA            0.3031438           NA               NA
## 280             NA            0.3031438           NA               NA
## 281             NA            0.3031438           NA               NA
## 282             NA            0.3031438           NA               NA
## 283             NA            0.3031438           NA               NA
## 284             NA            0.3031438           NA               NA
## 285             NA            0.3031438           NA               NA
## 286             NA            0.3031438           NA               NA
## 287             NA            0.3031438           NA               NA
## 288             NA            0.3031438           NA               NA
## 289             NA            0.3031438           NA               NA
## 290             NA            0.3031438           NA               NA
## 291             NA            0.3031438           NA               NA
## 292             NA            0.3031438           NA               NA
## 293             NA            0.3031438           NA               NA
## 294             NA            0.3031438           NA               NA
## 295             NA            0.3031438           NA               NA
## 296             NA            0.3031438           NA               NA
## 297             NA            0.3031438           NA               NA
## 298             NA            0.3031438           NA               NA
## 299             NA            0.3031438           NA               NA
## 300             NA            0.3031438           NA               NA
## 301             NA            0.3031438           NA               NA
## 302             NA            0.3031438           NA               NA
## 303             NA            0.3031438           NA               NA
## 304             NA            0.3031438           NA               NA
## 305             NA            0.3031438           NA               NA
## 306             NA            0.3031438           NA               NA
## 307             NA            0.3031438           NA               NA
## 308             NA            0.3031438           NA               NA
##     conc.combined.upper.95 conc.combined.lower.95 conc.upper.95.proportion
## 1                       NA                     NA                       NA
## 2                       NA                     NA                       NA
## 3                       NA                     NA                       NA
## 4                       NA                     NA                       NA
## 5                       NA                     NA                       NA
## 6                       NA                     NA                       NA
## 7                       NA                     NA                       NA
## 8                       NA                     NA                       NA
## 9                       NA                     NA                       NA
## 10                      NA                     NA                       NA
## 11                      NA                     NA                       NA
## 12                      NA                     NA                       NA
## 13                      NA                     NA                       NA
## 14                      NA                     NA                       NA
## 15                      NA                     NA                       NA
## 16                      NA                     NA                       NA
## 17                      NA                     NA                       NA
## 18                      NA                     NA                       NA
## 19                      NA                     NA                       NA
## 20                      NA                     NA                       NA
## 21                      NA                     NA                       NA
## 22                      NA                     NA                       NA
## 23                      NA                     NA                       NA
## 24                      NA                     NA                       NA
## 25                      NA                     NA                       NA
## 26                      NA                     NA                       NA
## 27                      NA                     NA                       NA
## 28                      NA                     NA                       NA
## 29                      NA                     NA                       NA
## 30                      NA                     NA                       NA
## 31                      NA                     NA                       NA
## 32                      NA                     NA                       NA
## 33                      NA                     NA                       NA
## 34                      NA                     NA                       NA
## 35                      NA                     NA                       NA
## 36                      NA                     NA                       NA
## 37                      NA                     NA                       NA
## 38                      NA                     NA                       NA
## 39                      NA                     NA                       NA
## 40                      NA                     NA                       NA
## 41                      NA                     NA                       NA
## 42                      NA                     NA                       NA
## 43                      NA                     NA                       NA
## 44                      NA                     NA                       NA
## 45                      NA                     NA                       NA
## 46                      NA                     NA                       NA
## 47                      NA                     NA                       NA
## 48                      NA                     NA                       NA
## 49                      NA                     NA                       NA
## 50                      NA                     NA                       NA
## 51                      NA                     NA                       NA
## 52                      NA                     NA                       NA
## 53                      NA                     NA                       NA
## 54                      NA                     NA                       NA
## 55                      NA                     NA                       NA
## 56                      NA                     NA                       NA
## 57                      NA                     NA                       NA
## 58                      NA                     NA                       NA
## 59                      NA                     NA                       NA
## 60                      NA                     NA                       NA
## 61                      NA                     NA                       NA
## 62                      NA                     NA                       NA
## 63                      NA                     NA                       NA
## 64                      NA                     NA                       NA
## 65                      NA                     NA                       NA
## 66                      NA                     NA                       NA
## 67                      NA                     NA                       NA
## 68                      NA                     NA                       NA
## 69                      NA                     NA                       NA
## 70                      NA                     NA                       NA
## 71                      NA                     NA                       NA
## 72                      NA                     NA                       NA
## 73                      NA                     NA                       NA
## 74                      NA                     NA                       NA
## 75                      NA                     NA                       NA
## 76                      NA                     NA                       NA
## 77                      NA                     NA                       NA
## 78                      NA                     NA                       NA
## 79                      NA                     NA                       NA
## 80                      NA                     NA                       NA
## 81                      NA                     NA                       NA
## 82                      NA                     NA                       NA
## 83                      NA                     NA                       NA
## 84                      NA                     NA                       NA
## 85                      NA                     NA                       NA
## 86                      NA                     NA                       NA
## 87                      NA                     NA                       NA
## 88                      NA                     NA                       NA
## 89                      NA                     NA                       NA
## 90                      NA                     NA                       NA
## 91                      NA                     NA                       NA
## 92                      NA                     NA                       NA
## 93                      NA                     NA                       NA
## 94                      NA                     NA                       NA
## 95                      NA                     NA                       NA
## 96                      NA                     NA                       NA
## 97                      NA                     NA                       NA
## 98                      NA                     NA                       NA
## 99                      NA                     NA                       NA
## 100                     NA                     NA                       NA
## 101                     NA                     NA                       NA
## 102                     NA                     NA                       NA
## 103                     NA                     NA                       NA
## 104                     NA                     NA                       NA
## 105                     NA                     NA                       NA
## 106                     NA                     NA                       NA
## 107                     NA                     NA                       NA
## 108                     NA                     NA                       NA
## 109                     NA                     NA                       NA
## 110                     NA                     NA                       NA
## 111                     NA                     NA                       NA
## 112                     NA                     NA                       NA
## 113                     NA                     NA                       NA
## 114                     NA                     NA                       NA
## 115                     NA                     NA                       NA
## 116                     NA                     NA                       NA
## 117                     NA                     NA                       NA
## 118                     NA                     NA                       NA
## 119                     NA                     NA                       NA
## 120                     NA                     NA                       NA
## 121                     NA                     NA                       NA
## 122                     NA                     NA                       NA
## 123                     NA                     NA                       NA
## 124                     NA                     NA                       NA
## 125                     NA                     NA                       NA
## 126                     NA                     NA                       NA
## 127                     NA                     NA                       NA
## 128                     NA                     NA                       NA
## 129                     NA                     NA                       NA
## 130                     NA                     NA                       NA
## 131                     NA                     NA                       NA
## 132                     NA                     NA                       NA
## 133                     NA                     NA                       NA
## 134                     NA                     NA                       NA
## 135                     NA                     NA                       NA
## 136                     NA                     NA                       NA
## 137                     NA                     NA                       NA
## 138                     NA                     NA                       NA
## 139                     NA                     NA                       NA
## 140                     NA                     NA                       NA
## 141                     NA                     NA                       NA
## 142                     NA                     NA                       NA
## 143                     NA                     NA                       NA
## 144                     NA                     NA                       NA
## 145                     NA                     NA                       NA
## 146                     NA                     NA                       NA
## 147                     NA                     NA                       NA
## 148                     NA                     NA                       NA
## 149                     NA                     NA                       NA
## 150                     NA                     NA                       NA
## 151                     NA                     NA                       NA
## 152                     NA                     NA                       NA
## 153                     NA                     NA                       NA
## 154                     NA                     NA                       NA
## 155                     NA                     NA                       NA
## 156                     NA                     NA                       NA
## 157                     NA                     NA                       NA
## 158                     NA                     NA                       NA
## 159                     NA                     NA                       NA
## 160                     NA                     NA                       NA
## 161                     NA                     NA                       NA
## 162                     NA                     NA                       NA
## 163                     NA                     NA                       NA
## 164                     NA                     NA                       NA
## 165                     NA                     NA                       NA
## 166                     NA                     NA                       NA
## 167                     NA                     NA                       NA
## 168                     NA                     NA                       NA
## 169                     NA                     NA                       NA
## 170                     NA                     NA                       NA
## 171                     NA                     NA                       NA
## 172                     NA                     NA                       NA
## 173                     NA                     NA                       NA
## 174                     NA                     NA                       NA
## 175                     NA                     NA                       NA
## 176                     NA                     NA                       NA
## 177                     NA                     NA                       NA
## 178                     NA                     NA                       NA
## 179                     NA                     NA                       NA
## 180                     NA                     NA                       NA
## 181                     NA                     NA                       NA
## 182                     NA                     NA                       NA
## 183                     NA                     NA                       NA
## 184                     NA                     NA                       NA
## 185                     NA                     NA                       NA
## 186                     NA                     NA                       NA
## 187                     NA                     NA                       NA
## 188                     NA                     NA                       NA
## 189                     NA                     NA                       NA
## 190                     NA                     NA                       NA
## 191                     NA                     NA                       NA
## 192                     NA                     NA                       NA
## 193                     NA                     NA                       NA
## 194                     NA                     NA                       NA
## 195                     NA                     NA                       NA
## 196                     NA                     NA                       NA
## 197                     NA                     NA                       NA
## 198                     NA                     NA                       NA
## 199                     NA                     NA                       NA
## 200                     NA                     NA                       NA
## 201                     NA                     NA                       NA
## 202             0.07319790            0.012185632               0.04623973
## 203            19.45791034            3.239259002              12.29172557
## 204             1.39712506            0.232586638               0.88257565
## 205             6.00859253            1.000281484               3.79567842
## 206             1.62626630            0.270732965               1.02732610
## 207             0.26414893            0.043974239               0.16686510
## 208             1.47668799            0.245831890               0.93283622
## 209             2.46326834            0.410073024               1.55606732
## 210             2.32005506            0.386231569               1.46559829
## 211             7.20840152            1.200019895               4.55360785
## 212            13.82167233            2.300965300               8.73126662
## 213             0.59831324            0.099604300               0.37795950
## 214           176.91931528           29.452673727             111.76141905
## 215             0.28006152            0.046623290               0.17691721
## 216             0.51875031            0.086359048               0.32769893
## 217             0.40099717            0.066756074               0.25331328
## 218             0.44236989            0.073643605               0.27944878
## 219             0.00000000            0.000000000               0.00000000
## 220             0.07319790            0.012185632               0.04623973
## 221             0.69378876            0.115498604               0.43827219
## 222             0.06365034            0.010596202               0.04020846
## 223             0.25141886            0.041854999               0.15882341
## 224             0.44236989            0.073643605               0.27944878
## 225             0.24823634            0.041325188               0.15681299
## 226             0.01591259            0.002649051               0.01005211
## 227             0.30552165            0.050861770               0.19300060
## 228             0.17822096            0.029669366               0.11258368
## 229             3.12523192            0.520273526               1.97423528
## 230             0.84654958            0.140929489               0.53477249
## 231             1.13615865            0.189142209               0.71772097
## 232             0.78926427            0.131392907               0.49858488
## 233             0.48692514            0.081060947               0.30759470
## 234             1.64217889            0.273382016               1.03737821
## 235             1.26027682            0.209804803               0.79612747
## 236             0.93566007            0.155764172               0.59106433
## 237             0.86882720            0.144638160               0.54884545
## 238             0.06046783            0.010066392               0.03819803
## 239             0.12093565            0.020132784               0.07639607
## 240             0.21641117            0.036027087               0.13670876
## 241             0.17185593            0.028609746               0.10856284
## 242             0.12093565            0.020132784               0.07639607
## 243             0.21641117            0.036027087               0.13670876
## 244             0.07638041            0.012715443               0.04825015
## 245             0.35644193            0.059338732               0.22516736
## 246             0.75107407            0.125035186               0.47445980
## 247             0.57603562            0.095895630               0.36388654
## 248             8.29045738            1.380155332               5.23715164
## 249             0.40736221            0.067815694               0.25733413
## 250             1.55306841            0.258547333               0.98108637
## 251             9.22611745            1.535919504               5.82821597
## 252             4.40460384            0.733257190               2.78242528
## 253             1.35575234            0.225699106               0.85644015
## 254             0.18776852            0.031258796               0.11861495
## 255             0.29279159            0.048742530               0.18495891
## 256             2.02726347            0.337489039               1.28063938
## 257             4.48416678            0.746502443               2.83268586
## 258             0.25778390            0.042914619               0.16284425
## 259             0.41690976            0.069405124               0.26336540
## 260                     NA                     NA                       NA
## 261                     NA                     NA                       NA
## 262                     NA                     NA                       NA
## 263                     NA                     NA                       NA
## 264                     NA                     NA                       NA
## 265                     NA                     NA                       NA
## 266                     NA                     NA                       NA
## 267                     NA                     NA                       NA
## 268                     NA                     NA                       NA
## 269                     NA                     NA                       NA
## 270                     NA                     NA                       NA
## 271                     NA                     NA                       NA
## 272                     NA                     NA                       NA
## 273                     NA                     NA                       NA
## 274                     NA                     NA                       NA
## 275                     NA                     NA                       NA
## 276                     NA                     NA                       NA
## 277                     NA                     NA                       NA
## 278                     NA                     NA                       NA
## 279                     NA                     NA                       NA
## 280                     NA                     NA                       NA
## 281                     NA                     NA                       NA
## 282                     NA                     NA                       NA
## 283                     NA                     NA                       NA
## 284                     NA                     NA                       NA
## 285                     NA                     NA                       NA
## 286                     NA                     NA                       NA
## 287                     NA                     NA                       NA
## 288                     NA                     NA                       NA
## 289                     NA                     NA                       NA
## 290                     NA                     NA                       NA
## 291                     NA                     NA                       NA
## 292                     NA                     NA                       NA
## 293                     NA                     NA                       NA
## 294                     NA                     NA                       NA
## 295                     NA                     NA                       NA
## 296                     NA                     NA                       NA
## 297                     NA                     NA                       NA
## 298                     NA                     NA                       NA
## 299                     NA                     NA                       NA
## 300                     NA                     NA                       NA
## 301                     NA                     NA                       NA
## 302                     NA                     NA                       NA
## 303                     NA                     NA                       NA
## 304                     NA                     NA                       NA
## 305                     NA                     NA                       NA
## 306                     NA                     NA                       NA
## 307                     NA                     NA                       NA
## 308                     NA                     NA                       NA
##     conc.lower.95.proportion conc.upper.95.fiber conc.lower.95.fiber
## 1                         NA                  NA        3.658766e+01
## 2                         NA                  NA        3.703658e+01
## 3                         NA                  NA        1.616142e+02
## 4                         NA                  NA        1.263733e+02
## 5                         NA                  NA        1.108853e+02
## 6                         NA                  NA        1.892233e+02
## 7                         NA                  NA        2.258109e+02
## 8                         NA                  NA        5.185122e+01
## 9                         NA                  NA        2.446659e+01
## 10                        NA                  NA        4.004440e+02
## 11                        NA                  NA        2.774377e+02
## 12                        NA                  NA        5.479170e+02
## 13                        NA                  NA        2.495505e-01
## 14                        NA                  NA        4.449351e-02
## 15                        NA                  NA        6.879083e-01
## 16                        NA                  NA        1.628849e-01
## 17                        NA                  NA        1.160700e-02
## 18                        NA                  NA        2.089260e-02
## 19                        NA                  NA        7.196341e-02
## 20                        NA                  NA        9.014772e-02
## 21                        NA                  NA        8.589182e-02
## 22                        NA                  NA        3.010083e-01
## 23                        NA                  NA        1.431530e-02
## 24                        NA                  NA        2.127950e-02
## 25                        NA                  NA        4.190128e-01
## 26                        NA                  NA        6.163318e-01
## 27                        NA                  NA        7.026105e-01
## 28                        NA                  NA        2.901751e-02
## 29                        NA                  NA        2.642528e-01
## 30                        NA                  NA                  NA
## 31                        NA                  NA                  NA
## 32                        NA                  NA                  NA
## 33                        NA                  NA                  NA
## 34                        NA                  NA                  NA
## 35                        NA                  NA                  NA
## 36                        NA                  NA                  NA
## 37                        NA                  NA                  NA
## 38                        NA                  NA                  NA
## 39                        NA                  NA                  NA
## 40                        NA                  NA                  NA
## 41                        NA                  NA                  NA
## 42                        NA                  NA                  NA
## 43                        NA                  NA                  NA
## 44                        NA                  NA                  NA
## 45                        NA                  NA                  NA
## 46                        NA                  NA                  NA
## 47                        NA                  NA                  NA
## 48                        NA                  NA                  NA
## 49                        NA                  NA                  NA
## 50                        NA                  NA                  NA
## 51                        NA                  NA                  NA
## 52                        NA                  NA                  NA
## 53                        NA                  NA                  NA
## 54                        NA                  NA                  NA
## 55                        NA                  NA                  NA
## 56                        NA                  NA                  NA
## 57                        NA                  NA                  NA
## 58                        NA                  NA                  NA
## 59                        NA                  NA                  NA
## 60                        NA                  NA                  NA
## 61                        NA                  NA                  NA
## 62                        NA                  NA                  NA
## 63                        NA                  NA                  NA
## 64                        NA                  NA                  NA
## 65                        NA                  NA                  NA
## 66                        NA                  NA                  NA
## 67                        NA                  NA                  NA
## 68                        NA                  NA                  NA
## 69                        NA                  NA                  NA
## 70                        NA                  NA                  NA
## 71                        NA                  NA                  NA
## 72                        NA                  NA                  NA
## 73                        NA                  NA                  NA
## 74                        NA                  NA                  NA
## 75                        NA                  NA                  NA
## 76                        NA                  NA                  NA
## 77                        NA                  NA                  NA
## 78                        NA                  NA                  NA
## 79                        NA                  NA                  NA
## 80                        NA                  NA                  NA
## 81                        NA                  NA                  NA
## 82                        NA                  NA                  NA
## 83                        NA                  NA                  NA
## 84                        NA                  NA                  NA
## 85                        NA                  NA                  NA
## 86                        NA                  NA                  NA
## 87                        NA                  NA                  NA
## 88                        NA                  NA                  NA
## 89                        NA                  NA                  NA
## 90                        NA                  NA                  NA
## 91                        NA                  NA                  NA
## 92                        NA                  NA                  NA
## 93                        NA                  NA                  NA
## 94                        NA                  NA                  NA
## 95                        NA                  NA                  NA
## 96                        NA                  NA                  NA
## 97                        NA                  NA                  NA
## 98                        NA                  NA                  NA
## 99                        NA                  NA                  NA
## 100                       NA                  NA                  NA
## 101                       NA                  NA                  NA
## 102                       NA                  NA                  NA
## 103                       NA                  NA                  NA
## 104                       NA                  NA                  NA
## 105                       NA                  NA                  NA
## 106                       NA                  NA                  NA
## 107                       NA                  NA                  NA
## 108                       NA                  NA                  NA
## 109                       NA                  NA                  NA
## 110                       NA                  NA                  NA
## 111                       NA                  NA                  NA
## 112                       NA                  NA                  NA
## 113                       NA                  NA                  NA
## 114                       NA                  NA                  NA
## 115                       NA                  NA                  NA
## 116                       NA                  NA                  NA
## 117                       NA                  NA                  NA
## 118                       NA                  NA                  NA
## 119                       NA                  NA                  NA
## 120                       NA                  NA                  NA
## 121                       NA                  NA                  NA
## 122                       NA                  NA                  NA
## 123                       NA                  NA                  NA
## 124                       NA                  NA                  NA
## 125                       NA                  NA                  NA
## 126                       NA                  NA                  NA
## 127                       NA                  NA                  NA
## 128                       NA                  NA                  NA
## 129                       NA                  NA                  NA
## 130                       NA                  NA                  NA
## 131                       NA                  NA                  NA
## 132                       NA                  NA                  NA
## 133                       NA                  NA                  NA
## 134                       NA                  NA                  NA
## 135                       NA                  NA                  NA
## 136                       NA                  NA                  NA
## 137                       NA                  NA                  NA
## 138                       NA                  NA                  NA
## 139                       NA                  NA                  NA
## 140                       NA                  NA                  NA
## 141                       NA                  NA                  NA
## 142                       NA                  NA                  NA
## 143                       NA                  NA                  NA
## 144                       NA                  NA                  NA
## 145                       NA                  NA                  NA
## 146                       NA                  NA                  NA
## 147                       NA                  NA                  NA
## 148                       NA                  NA                  NA
## 149                       NA                  NA                  NA
## 150                       NA                  NA                  NA
## 151                       NA                  NA                  NA
## 152                       NA                  NA                  NA
## 153                       NA                  NA                  NA
## 154                       NA                  NA                  NA
## 155                       NA                  NA                  NA
## 156                       NA                  NA                  NA
## 157                       NA                  NA                  NA
## 158                       NA                  NA                  NA
## 159                       NA                  NA                  NA
## 160                       NA                  NA                  NA
## 161                       NA                  NA                  NA
## 162                       NA                  NA                  NA
## 163                       NA                  NA                  NA
## 164                       NA                  NA                  NA
## 165                       NA                  NA                  NA
## 166                       NA                  NA                  NA
## 167                       NA                  NA                  NA
## 168                       NA                  NA                  NA
## 169                       NA                  NA                  NA
## 170                       NA                  NA                  NA
## 171                       NA                  NA                  NA
## 172                       NA                  NA                  NA
## 173                       NA                  NA                  NA
## 174                       NA                  NA                  NA
## 175                       NA                  NA                  NA
## 176                       NA                  NA                  NA
## 177                       NA                  NA                  NA
## 178                       NA                  NA                  NA
## 179                       NA                  NA                  NA
## 180                       NA                  NA                  NA
## 181                       NA                  NA                  NA
## 182                       NA                  NA                  NA
## 183                       NA                  NA                  NA
## 184                       NA                  NA                  NA
## 185                       NA                  NA                  NA
## 186                       NA                  NA                  NA
## 187                       NA                  NA                  NA
## 188                       NA                  NA                  NA
## 189                       NA                  NA                  NA
## 190                       NA                  NA                  NA
## 191                       NA                  NA                  NA
## 192                       NA                  NA                  NA
## 193                       NA                  NA                  NA
## 194                       NA                  NA                  NA
## 195                       NA                  NA                  NA
## 196                       NA                  NA                  NA
## 197                       NA                  NA                  NA
## 198                       NA                  NA                  NA
## 199                       NA                  NA                  NA
## 200                       NA                  NA                  NA
## 201                       NA                  NA                  NA
## 202              0.039143802          0.04623973        3.423649e-02
## 203             10.405443771         12.29172557        9.100952e+00
## 204              0.747136051          0.88257565        6.534704e-01
## 205              3.213195590          3.79567842        2.810369e+00
## 206              0.869673171          1.02732610        7.606455e-01
## 207              0.141258069          0.16686510        1.235491e-01
## 208              0.789683662          0.93283622        6.906840e-01
## 209              1.317274040          1.55606732        1.152132e+00
## 210              1.240688340          1.46559829        1.085148e+00
## 211              3.854813566          4.55360785        3.371550e+00
## 212              7.391371001          8.73126662        6.464743e+00
## 213              0.319958035          0.37795950        2.798461e-01
## 214             94.610569952        111.76141905        8.274960e+01
## 215              0.149767591          0.17691721        1.309918e-01
## 216              0.277410424          0.32769893        2.426325e-01
## 217              0.214439960          0.25331328        1.875564e-01
## 218              0.236564718          0.27944878        2.069075e-01
## 219              0.000000000          0.00000000        0.000000e+00
## 220              0.039143802          0.04623973        3.423649e-02
## 221              0.371015169          0.43827219        3.245024e-01
## 222              0.034038089          0.04020846        2.977086e-02
## 223              0.134450451          0.15882341        1.175949e-01
## 224              0.236564718          0.27944878        2.069075e-01
## 225              0.132748547          0.15681299        1.161064e-01
## 226              0.008509522          0.01005211        7.442715e-03
## 227              0.163382827          0.19300060        1.429001e-01
## 228              0.095306649          0.11258368        8.335841e-02
## 229              1.671270164          1.97423528        1.461749e+00
## 230              0.452706582          0.53477249        3.959525e-01
## 231              0.607579887          0.71772097        5.314099e-01
## 232              0.422072302          0.49858488        3.691587e-01
## 233              0.260391380          0.30759470        2.277471e-01
## 234              0.878182693          1.03737821        7.680882e-01
## 235              0.673954160          0.79612747        5.894631e-01
## 236              0.500359907          0.59106433        4.376317e-01
## 237              0.464619913          0.54884545        4.063723e-01
## 238              0.032336184          0.03819803        2.828232e-02
## 239              0.064672369          0.07639607        5.656464e-02
## 240              0.115729502          0.13670876        1.012209e-01
## 241              0.091902840          0.10856284        8.038133e-02
## 242              0.064672369          0.07639607        5.656464e-02
## 243              0.115729502          0.13670876        1.012209e-01
## 244              0.040845707          0.04825015        3.572503e-02
## 245              0.190613298          0.22516736        1.667168e-01
## 246              0.401649449          0.47445980        3.512962e-01
## 247              0.308044704          0.36388654        2.694263e-01
## 248              4.433461077          5.23715164        3.877655e+00
## 249              0.217843769          0.25733413        1.905335e-01
## 250              0.830529369          0.98108637        7.264090e-01
## 251              4.933820983          5.82821597        4.315286e+00
## 252              2.355435751          2.78242528        2.060144e+00
## 253              0.725011293          0.85644015        6.341194e-01
## 254              0.100412362          0.11861495        8.782404e-02
## 255              0.156575209          0.18495891        1.369460e-01
## 256              1.084113131          1.28063938        9.482019e-01
## 257              2.397983362          2.83268586        2.097357e+00
## 258              0.137854260          0.16284425        1.205720e-01
## 259              0.222949482          0.26336540        1.949991e-01
## 260                       NA                  NA        1.403265e+02
## 261                       NA                  NA        1.107468e+02
## 262                       NA                  NA        3.009977e+02
## 263                       NA                  NA        2.542010e+01
## 264                       NA                  NA        7.900259e+01
## 265                       NA                  NA        2.018404e+02
## 266                       NA                  NA        9.415342e+01
## 267                       NA                  NA        6.409342e+01
## 268                       NA                  NA        1.094787e+02
## 269                       NA                  NA        1.033016e+02
## 270                       NA                  NA        2.664094e+02
## 271                       NA                  NA        7.576882e+02
## 272                       NA                  NA        1.214827e+02
## 273                       NA                  NA        6.642753e+01
## 274                       NA                  NA        3.511466e+02
## 275                       NA                  NA        2.641502e+01
## 276                       NA                  NA        0.000000e+00
## 277                       NA                  NA        7.335910e+01
## 278                       NA                  NA        2.873367e+01
## 279                       NA                  NA        5.112907e+01
## 280                       NA                  NA        1.484014e+02
## 281                       NA                  NA        1.254713e+02
## 282                       NA                  NA        5.181603e+01
## 283                       NA                  NA        3.085274e+02
## 284                       NA                  NA        9.768344e+01
## 285                       NA                  NA        5.496375e+02
## 286                       NA                  NA        9.650673e+01
## 287                       NA                  NA        3.820210e+01
## 288                       NA                  NA        1.445771e+03
## 289                       NA                  NA        9.121724e+01
## 290                       NA                  NA        8.917915e+01
## 291                       NA                  NA        6.501963e+01
## 292                       NA                  NA        1.728881e+02
## 293                       NA                  NA        1.418136e+02
## 294                       NA                  NA        7.599107e+02
## 295                       NA                  NA        2.550508e+02
## 296                       NA                  NA        4.041340e+01
## 297                       NA                  NA        2.488124e+02
## 298                       NA                  NA        1.354969e+02
## 299                       NA                  NA        6.461844e+01
## 300                       NA                  NA        1.079846e+02
## 301                       NA                  NA        1.756799e+02
## 302                       NA                  NA        4.021637e+02
## 303                       NA                  NA        1.349807e+02
## 304                       NA                  NA        1.147336e+02
## 305                       NA                  NA        2.059565e+02
## 306                       NA                  NA        2.123148e+02
## 307                       NA                  NA        1.119509e+02
## 308                       NA                  NA        1.792913e+02
6.0.0.0.1.1 EXPORT FINAL DATASET
write.csv(sensitivity,
          "output/data/final_aligned_dataset.csv"
          )

###Export table showing correction factors

CF_table <- sensitivity %>% 
  group_by(Sampling.apparatus, matrix) %>% 
  summarize(mesh_size = mean(x1M),
            CF = round(mean(CF),2), 
            CF.lower.95 = round(mean(CF.lower.95),2),
            CF.upper.95 = round(mean(CF.upper.95),2))

write.csv(CF_table,
          "output/data/CF_table.csv")

CF_table
## # A tibble: 6 x 6
## # Groups:   Sampling.apparatus [6]
##   Sampling.apparatus       matrix        mesh_size    CF CF.lower.95 CF.upper.95
##   <fct>                    <chr>             <dbl> <dbl>       <dbl>       <dbl>
## 1 1-L grab                 Surface (1L-~        50  50.5       38.5         62.5
## 2 Composite                WWTP                110  17.0       13.6         20.4
## 3 depth-integrated perisa~ Storm               106  59.9       57.6         62.2
## 4 Manta Trawl              Surface (Man~       333 357.       211.         502. 
## 5 otter trawl/cast net     Fish                 25  11.4        8.31        14.4
## 6 Van Veen Grab            Sediment             45  66.2       52.0         80.5

6.0.1 RSD

sensitivity %>% 
  filter(Sampling.apparatus == "Manta Trawl") %>% 
  dplyr::select(c(CF.rsd,
                  proportion.rsd,
                  fiber.correction.rsd,
                  combined.rsd,
                  sampleID)) %>% 
  summarize(CF.rsd = mean(CF.rsd), proportion.rsd = mean(proportion.rsd),  fiber.correction.rsd = mean(fiber.correction.rsd), combined.rsd = mean(combined.rsd))
##     CF.rsd proportion.rsd fiber.correction.rsd combined.rsd
## 1 1.000031      0.3229184            0.3031438     1.093725

6.0.2 Comparison of Sensitivities

6.0.2.1 Matrix of uncertainties for corrections

correction_factors <- data.frame(factor = c("fiber", "plastic", "size", "combined"),
                                 percentile.5th = c(fiber5, plastic5, CF5, combined.corrections5),
                                 median = c(fiber50, plastic50, CF50, combined.corrections50),
                                 percentile.95th = c(fiber95, plastic95, CF95, combined.corrections95))

correction_factors
##     factor percentile.5th       median percentile.95th
## 1    fiber      1.1905934    8.9109466    5.197383e+01
## 2  plastic      0.3043084    0.6327774    9.469945e-01
## 3     size     91.3531930  354.9395184    1.490064e+03
## 4 combined    157.8107266 1856.1636686    1.930671e+04
sfBay_aligned_sensitivity <- sfBay_aligned %>% 
  ## hold everything constant except one variable
  mutate(fiber5.sensitivity = fiber5 * plastic50 * CF50,
         fiber95.sensitivity = fiber95 * plastic50 * CF50,
         plastic5.sensitivity = fiber50 * plastic5 * CF50,
         plastic95.sensitivity = fiber50 * plastic95 * CF50,
         CF5.sensitivity = fiber50 * plastic50 * CF5,
         CF95.sensitivity = fiber50 * plastic50 * CF95) %>% 
  #multiply blank-corrected particles by correction factors
  mutate(conc.fiber.05 = particles.L.blank.corrected * fiber5.sensitivity,
         conc.fiber.95 = particles.L.blank.corrected * fiber95.sensitivity,
         conc.plastic.05 = particles.L.blank.corrected * plastic5.sensitivity,
         conc.plastic.95 = particles.L.blank.corrected * plastic95.sensitivity,
         conc.CF.05 = particles.L.blank.corrected * CF5.sensitivity,
         conc.CF.95 = particles.L.blank.corrected * CF95.sensitivity,
         conc.combined.05 = particles.L.blank.corrected * combined.corrections5,
         conc.combined.95 = particles.L.blank.corrected * combined.corrections95)
#prep rest
wide.sensitivity.exceedances <- sfBay_aligned_sensitivity %>% 
  # remove non-bay samples
  filter(!locationNew %in% c("National Marine Sanctuary")) %>% 
  # only manta trawl
  filter(Sampling.apparatus == "Manta Trawl") %>% 
  dplyr::select(c(particle.L.master.50,
                  conc.combined.05, conc.combined.95, #combined
                  conc.plastic.05, conc.plastic.95, #proportions only
                  conc.fiber.05, conc.fiber.95, #fiber corrections only
                  conc.CF.05, conc.CF.95, #alignment only
                  sampleID)) %>% 
  pivot_longer(-c(sampleID), names_to = "factor", values_to = "conc") %>% 
  mutate(variable = case_when(
    grepl("plastic", factor) ~ "plastic proportion",
    grepl("combined", factor) ~ "combined alignments and corrections",
    grepl("fiber", factor) ~ "fiber correction",
    grepl("CF", factor) ~ "size alignment",
    factor == "particle.L.master.50" ~ "median")) %>% 
  mutate(interval = case_when(
    grepl("05", factor) ~ "lower",
    grepl("95", factor) ~ "upper",
    variable == "median" ~ "median"
  )) %>% 
  ## compare to thresholds
    group_by(variable, interval) %>% 
  summarize(n = n(),
            belowThreshold1 = sum(conc < Threshold1_food),
            aboveThreshold1 = sum(conc > Threshold1_food),
            aboveThreshold2 = sum(conc > Threshold2_food),
            aboveThreshold3 = sum(conc > Threshold3_food),
            aboveThreshold4 = sum(conc > Threshold4_food)) %>% 
  mutate(percent.above.threshold1 = aboveThreshold1 / n) %>% 
  pivot_wider(c(variable, interval, percent.above.threshold1), names_from = interval, values_from = percent.above.threshold1)

#get median
median <- wide.sensitivity.exceedances$median[3]


wide.sensitivity.exceedances.prep <- wide.sensitivity.exceedances %>% 
  filter(variable != "median") %>% 
  #arrange(desc(lower)) %>% 
  mutate(name = factor(factor(variable), 
                           levels = c("combined alignments and corrections", "fiber correction", "size alignment", "plastic proportion")))
  ####plot####
## Break axis ##
#ide.sensitivity.exceedances.prep$facet <- wide.sensitivity.exceedances.prep$upper < 0.5

sensitivity.figure <- wide.sensitivity.exceedances.prep %>% 
  ggplot() +
  geom_errorbarh(aes(y = name, xmin = lower, xmax = upper),
                 na.rm = TRUE) +
  geom_vline(xintercept = median, linetype = "dashed", color = "red", size = 1.2) +
  scale_y_discrete(labels = c("combined alignments \n and corrections", "fiber correction", "size alignment",  "plastic proportion")) +
#  facet_grid(. ~ facet, scales = "free", space = "free") +
  scale_x_continuous(name = "Percentage of All SF Bay Manta Trawl Samples \n Exceeding Food Dilution Threshold One (+- 95% CI)",
                       labels = scales::percent_format(scale = 100, accuracy= 1),
                     limits = c(0,1.0)) +
  ylab("Corrections/Alignments") +
  theme.type

sensitivity.figure  

ggsave(plot = sensitivity.figure,
       filename = "sensitivity.figure.jpeg",
       path = "output/figures/", 
       width = 8, height = 6, units = "in",
       bg = "white",
       dpi = 300)

6.0.2.2 Compare to thresholds

6.0.2.2.1 All surface water samples
#count samples
surface.count <- sensitivity %>% 
  filter(!str_detect(sampleID, "DUP")) %>% 
  filter(!str_detect(sampleID, "blank")) %>% 
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  summarize(n())

sensitivity.analysis <- sensitivity %>% 
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  #just select concentrations
  dplyr::select(c(particle.L.master.50,
                  particle.L.master.05,
                  particle.L.master.95,
                  particle.L.master.25,
                  particle.L.master.75
                  #Conc, 
                  #conc.upper.68, 
                  #conc.upper.95, 
                  #conc.upper.99, conc.lower.68,
                  #conc.lower.95#,
                  #conc.lower.99
                  )) %>% 
  #make long data
  pivot_longer(everything()) %>% 
  mutate(aboveThreshold = factor(case_when(
    value < Threshold1_food ~ "below Threshold 1",
    value >= Threshold1_food & value < Threshold2_food ~ "above Threshold 1",
    value >= Threshold2_food & value < Threshold3_food ~ "above Threshold 2",
    value >= Threshold3_food & value < Threshold4_food ~ "above Threshold 3",
    value >= Threshold4_food ~ "above Threshold 4"
  ))) %>% 
 group_by(aboveThreshold, name) %>%
  dplyr::summarize(n = n()) %>% 
  mutate(rel.freq = paste0(round(100 *(n/surface.count[1,]),1),"%")) %>% 
  pivot_wider(names_from = "name", values_from = c("n", "rel.freq")) %>% 
  mutate(aboveThreshold = factor(aboveThreshold, levels = c("below Threshold 1", "above Threshold 1", "above Threshold 2", "above Threshold 3", "above Threshold 4"))) %>% 
  arrange(aboveThreshold)

sensitivity.analysis 
## # A tibble: 6 x 11
## # Groups:   aboveThreshold [6]
##   aboveThreshold    n_particle.L.master.05 n_particle.L.mast~ n_particle.L.mast~
##   <fct>                              <int>              <int>              <int>
## 1 below Threshold 1                     52                 43                 31
## 2 above Threshold 1                      5                 13                 21
## 3 above Threshold 2                     NA                  1                  3
## 4 above Threshold 3                      1                 NA                  5
## 5 above Threshold 4                     NA                  1                 47
## 6 <NA>                                  49                 49                 NA
## # ... with 7 more variables: n_particle.L.master.75 <int>,
## #   n_particle.L.master.95 <int>, rel.freq_particle.L.master.05 <chr>,
## #   rel.freq_particle.L.master.25 <chr>, rel.freq_particle.L.master.50 <chr>,
## #   rel.freq_particle.L.master.75 <chr>, rel.freq_particle.L.master.95 <chr>
6.0.2.2.1.1 EXPORT EXCEEDANCES
write.csv(sensitivity.analysis ,
          "output/data/surface_water_exceedances_sensitivity_analysis.csv"
          )
6.0.2.2.1.2 Sensitivity Plot
#ECDF by System
sfBayECDF_sensitivity <- sfBay_aligned %>% 
  # remove non-bay samples
  filter(!locationNew %in% c("National Marine Sanctuary")) %>% 
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  filter(Sampling.apparatus == "Manta Trawl") %>% 
  filter(particle.L.master > 0) %>% 
  #just select concentrations
  #dplyr::select(c(Conc, conc.combined.upper.95, conc.combined.lower.95)) %>% 
  dplyr::select(c(particle.L.master.50,
                  particle.L.master.05,
                  particle.L.master.95,
                  particle.L.master.25,
                  particle.L.master.75)) %>% 
  #make long data
  pivot_longer(everything()) %>% 
  mutate(name = as.factor(name)) %>% 
  mutate(percentile = case_when(grepl("50", name) ~ "50th Percentile",
                                grepl("95", name) ~ "95th Percentile",
                                grepl("25", name) ~ "25th Percentile",
                                grepl("05", name) ~ "5th Percentile",
                                grepl("75", name) ~ "75th Percentile",
                                name == "Conc" ~ "Mean")) %>% 
  ggplot() +
 # stat_ecdf(aes(x = value, color = name),
  #          geom = "point", size = 1, alpha = 0.5) +
  stat_ecdf(aes(x = value, color = percentile),geom = "step", linetype = 'solid', alpha = 1, size = 1) +
  #color
  scale_color_manual(name = "Probabilistic Uncertainty",
                     values = c("5th Percentile" = "#8cd3ff",
                                "25th Percentile" = "#05619c",
                                "50th Percentile" = "#012740",
                                "75th Percentile" = "#05619c",
                                "95th Percentile" = "#8cd3ff"
                              ),
                     labels = c("5th Percentile",
                                "25th Percentile",
                                "50th Percentile",
                                "75th Percentile",
                                "95th Percentile"
                                )) +
  # ##Food Dilution thresholds #
   geom_vline(xintercept = Threshold1_food, linetype = 'dashed', color = "#fcc523", size = 1.5) +
   geom_text(label = "Threshold One", color = "#fcc523" , x = Threshold1_food, y = 0.10, size = 6)+
  geom_vline(xintercept = Threshold2_food, linetype = 'dashed', color = "#bf8345", size = 1.5) +
  geom_text(label = "Threshold Two", color = "#bf8345" , x = Threshold2_food, y = 0.20, size = 6)+
   geom_vline(xintercept = Threshold3_food, linetype = 'dashed', color = "#e06665", size = 1.5) +
   geom_text(label = "Threshold Three", color = "#e06665" , x = Threshold3_food, y = 0.30, size = 6)+
   geom_vline(xintercept = Threshold4_food, linetype = 'dashed', color = "#ac5784", size = 1.5) +
  geom_text(label = "Threshold Four", color = "#ac5784",  x = Threshold4_food, y = 0.40, size = 6)+
  ## Food dilution 95% CI's ##
  # geom_vline(xintercept = Threshold2_food_lcl, linetype = 'dashed', color = "#ebbb38", size = 1) +
  # geom_vline(xintercept = Threshold2_food_hcl, linetype = 'dashed', color = "#ebbb38", size = 1) +
  # geom_vline(xintercept = Threshold3_food_lcl, linetype = 'dashed', color = "#fd8060", size = 1.5) +
  # geom_vline(xintercept = Threshold3_food_hcl, linetype = 'dashed', color = "#fd8060", size = 1.5) +
  # geom_vline(xintercept = Threshold4_food_lcl, linetype = 'dashed', color = "#E84258", size = 1.5) +
  # geom_vline(xintercept = Threshold4_food_hcl, linetype = 'dashed', color = "#E84258", size = 1.5) +
  
  #### Tissue Translocation Thresholds ####
# geom_vline(xintercept = Threshold1_oxidative.stress, linetype = 'dashed', color = "#85a17d", size = 1.5) +
#    geom_text(label = "oxidative.stress Dilution T1", color = "#85a17d" , x = Threshold1_oxidative.stress, y = 0.10, size = 6)+
#   geom_vline(xintercept = Threshold2_oxidative.stress, linetype = 'dashed', color = "#ebbb38", size = 1.5) +
#   geom_text(label = "oxidative.stress Dilution T2", color = "#ebbb38" , x = Threshold2_oxidative.stress, y = 0.15, size = 6)+
#    geom_vline(xintercept = Threshold3_oxidative.stress, linetype = 'dashed', color = "#fd8060", size = 1.5) +
#    geom_text(label = "oxidative.stress Dilution T3", color = "#fd8060" , x = Threshold3_oxidative.stress, y = 0.20, size = 6)+
#    geom_vline(xintercept = Threshold4_oxidative.stress, linetype = 'dashed', color = "#E84258", size = 1.5) +
#   geom_text(label = "oxidative.stress Dilution T4", color = "#E84258",  x = Threshold4_oxidative.stress, y = 0.25, size = 6)+
  
  ## Food dilution 95% CI's ribbons ##
  #annotate("rect", xmin = Threshold2_food_lcl, xmax = Threshold2_food_hcl, ymin = 0, ymax = 1, fill = "#fd8060", alpha = 0.2, color = "#fd8060", linetype = "dotted")+
  #annotate("rect", xmin = Threshold3_food_lcl, xmax = Threshold3_food_hcl, ymin = 0, ymax = 1, fill = "#fd8060", alpha = 0.2)+
#  annotate("rect", xmin = Threshold4_food_lcl, xmax = Threshold4_food_hcl, ymin = 0, ymax = 1, fill = "#E84258", alpha = 0.2,
 #          color = "#fd8060", linetype = "dotted")+
  
    ylab("Cumulative Density") +
  xlab("Surface Water Particles/L (aligned to 1 to 5,000 µm)") +
  #xlab(paste0("Particles/L (" ,x1D_set, " to ", x2D_set, "um)"))+
  scale_y_continuous(labels = scales::percent)+
  coord_trans(x = "log10") +
  scale_x_continuous(#breaks = scales::trans_breaks("log10", function(x) 10^x,n = 10),
                     breaks = c(0.001, 0.005, 0.01, 0.05, 0.1, 0.5, 1, 5, 10, 50, 100),
                     labels = comma_signif,
                     limits = c(1e-3,100))+
  annotation_logticks(scaled = FALSE)+ #log scale rick marks on bottom
  theme.type +
  theme(legend.title = element_blank(),
        legend.position = c(0.1,0.6),
        legend.key.size = unit(0.6, 'cm'))
  #labs(title = "Global Surface Water Marine Microplastics Concentrations",
   #    subtitle = paste("Particles/L corrected to:",x1D_set, "to", x2D_set, "um"),
    #   caption = paste("Concentration data from Adams et al (2019): 23 studies, 57 sampling locations, n = 377; corrected for size ranges. Alpha = ",alpha))
 
sfBayECDF_sensitivity

ggsave(plot = sfBayECDF_sensitivity,
       filename = "sfBayECDF_sensitivity.jpeg",
       path = "output/figures/", 
       width = 10, height = 6, units = "in",
       bg = "white",
       dpi = 300)
6.0.2.2.2 MANTA only

#####Food Dilution

#count samples
manta.count <- sfBay_aligned %>% 
  filter(!str_detect(sampleID, "DUP")) %>% 
  filter(!str_detect(sampleID, "blank")) %>% 
   # remove non-bay samples
  filter(!locationNew %in% c("National Marine Sanctuary")) %>% 
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  filter(Sampling.apparatus == "Manta Trawl") %>%
  summarize(n())


sensitivity.analysis.manta_inter <- sfBay_aligned %>% 
  filter(!str_detect(sampleID, "DUP")) %>% 
  filter(!str_detect(sampleID, "blank")) %>% 
   # remove non-bay samples
  filter(!locationNew %in% c("National Marine Sanctuary")) %>% 
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  filter(Sampling.apparatus == "Manta Trawl") %>%
  #just select concentrations
  dplyr::select(c(particle.L.master.50,
                  particle.L.master.05,
                  particle.L.master.95,
                  particle.L.master.25,
                  particle.L.master.75
                  )) %>% 
  #make long data
  pivot_longer(everything(),names_to = "alignment", values_to = "conc") %>% 
  #mutate(alignment = factor(alignment)) %>% 
  group_by(alignment) %>% 
  summarize(n = n(),
            belowThreshold1 = sum(conc < Threshold1_food),
            aboveThreshold1 = sum(conc > Threshold1_food),
            aboveThreshold2 = sum(conc > Threshold2_food),
            aboveThreshold3 = sum(conc > Threshold3_food),
            aboveThreshold4 = sum(conc > Threshold4_food))

  #transpose
t_sensitivity.analysis.manta <- data.table::transpose(sensitivity.analysis.manta_inter)
# get row and colnames in order
colnames(t_sensitivity.analysis.manta) <- rownames(sensitivity.analysis.manta_inter)
rownames(t_sensitivity.analysis.manta) <- colnames(sensitivity.analysis.manta_inter)

t_2 <- t_sensitivity.analysis.manta %>% janitor::row_to_names(row_number = 1)
rownames(t_2) <- colnames(sensitivity.analysis.manta_inter[-1])

sensitivity.analysis.manta_t2 <- t_2 %>% tibble::rownames_to_column("aboveThreshold")

sensitivity.analysis.manta <- sensitivity.analysis.manta_t2 %>% 
  filter(!aboveThreshold == "n") %>% 
  mutate_at(c(2:6), as.numeric) %>% 
  mutate(particle.L.master.05.percent = particle.L.master.05 / manta.count[1,],
         particle.L.master.25.percent = particle.L.master.25 / manta.count[1,],
         particle.L.master.50.percent = particle.L.master.50 / manta.count[1,],
         particle.L.master.75.percent = particle.L.master.75 / manta.count[1,],
         particle.L.master.95.percent = particle.L.master.95 / manta.count[1,]) %>% 
  #pretty formatting
  mutate(percentages = paste0( round(100 * particle.L.master.50.percent,0),
                              "% (",
                              round( 100 * particle.L.master.05.percent, 0),
                              "% to ",
                               round(100 * particle.L.master.95.percent, 0),
                              "%)")) %>% 
  #pretty formatting
  mutate(numbers = paste0(round(particle.L.master.50),
                              " (",
                              round(particle.L.master.05, 2),
                              " to ",
                              round(particle.L.master.95, 2),
                              ")"))

sensitivity.analysis.manta
##    aboveThreshold particle.L.master.05 particle.L.master.25
## 1 belowThreshold1                   27                   19
## 2 aboveThreshold1                    6                   14
## 3 aboveThreshold2                    1                    2
## 4 aboveThreshold3                    1                    1
## 5 aboveThreshold4                    0                    1
##   particle.L.master.50 particle.L.master.75 particle.L.master.95
## 1                   10                    2                    0
## 2                   23                   31                   33
## 3                    7                   12                   24
## 4                    4                    9                   20
## 5                    1                    1                    7
##   particle.L.master.05.percent particle.L.master.25.percent
## 1                   0.81818182                   0.57575758
## 2                   0.18181818                   0.42424242
## 3                   0.03030303                   0.06060606
## 4                   0.03030303                   0.03030303
## 5                   0.00000000                   0.03030303
##   particle.L.master.50.percent particle.L.master.75.percent
## 1                   0.30303030                   0.06060606
## 2                   0.69696970                   0.93939394
## 3                   0.21212121                   0.36363636
## 4                   0.12121212                   0.27272727
## 5                   0.03030303                   0.03030303
##   particle.L.master.95.percent       percentages      numbers
## 1                    0.0000000   30% (82% to 0%) 10 (27 to 0)
## 2                    1.0000000 70% (18% to 100%) 23 (6 to 33)
## 3                    0.7272727   21% (3% to 73%)  7 (1 to 24)
## 4                    0.6060606   12% (3% to 61%)  4 (1 to 20)
## 5                    0.2121212    3% (0% to 21%)   1 (0 to 7)
6.0.2.2.2.1 EXPORT EXCEEDANCES
write.csv(sensitivity.analysis.manta,
          "output/data/surface_water_exceedances_sensitivity_analysis_manta.csv"
          )

#####Tissue Translocation

#count samples
manta.count <- sfBay_aligned %>% 
  filter(!str_detect(sampleID, "DUP")) %>% 
    filter(!str_detect(sampleID, "blank")) %>% 
  # remove non-bay samples
  filter(!locationNew %in% c("National Marine Sanctuary")) %>% 
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  filter(Sampling.apparatus == "Manta Trawl") %>%
  summarize(n())


sensitivity.analysis.manta.oxidative_inter <- sfBay_aligned %>% 
   # remove non-bay samples
  filter(!locationNew %in% c("National Marine Sanctuary")) %>% 
  filter(!str_detect(sampleID, "DUP")) %>% 
    filter(!str_detect(sampleID, "blank")) %>% 
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  filter(Sampling.apparatus == "Manta Trawl") %>%
  dplyr::select(c(particle.L.master.50,
                  particle.L.master.05,
                  particle.L.master.95,
                  particle.L.master.25,
                  particle.L.master.75
                  )) %>% 
  #make long data
  pivot_longer(everything(),names_to = "alignment", values_to = "conc") %>% 
  #mutate(alignment = factor(alignment)) %>% 
  group_by(alignment) %>% 
  summarize(n = n(),
            belowThreshold1 = sum(conc < Threshold1_oxidative.stress),
            aboveThreshold1 = sum(conc > Threshold1_oxidative.stress),
            aboveThreshold2 = sum(conc > Threshold2_oxidative.stress),
            aboveThreshold3 = sum(conc > Threshold3_oxidative.stress),
            aboveThreshold4 = sum(conc > Threshold4_oxidative.stress))

  #transpose
t_sensitivity.analysis.manta.oxidative <- data.table::transpose(sensitivity.analysis.manta.oxidative_inter)
# get row and colnames in order
colnames(t_sensitivity.analysis.manta.oxidative) <- rownames(sensitivity.analysis.manta.oxidative_inter)
rownames(t_sensitivity.analysis.manta.oxidative) <- colnames(sensitivity.analysis.manta.oxidative_inter)

t_2 <- t_sensitivity.analysis.manta.oxidative %>% janitor::row_to_names(row_number = 1)
rownames(t_2) <- colnames(sensitivity.analysis.manta.oxidative_inter[-1])

sensitivity.analysis.manta.oxidative_t2 <- t_2 %>% tibble::rownames_to_column("aboveThreshold")

sensitivity.analysis.manta.oxidative <- sensitivity.analysis.manta.oxidative_t2 %>% 
  filter(!aboveThreshold == "n") %>% 
mutate_at(c(2:6), as.numeric) %>% 
  mutate(particle.L.master.50.percent = particle.L.master.50 / manta.count[1,],
         particle.L.master.05.percent = particle.L.master.05 / manta.count[1,],
         particle.L.master.95.percent = particle.L.master.95 / manta.count[1,]) %>% 
    #pretty formatting
  mutate(percentages = paste0( round(100 * particle.L.master.50.percent,0),
                              "% (",
                              round( 100 * particle.L.master.05.percent, 0),
                              "% to ",
                               round(100 * particle.L.master.95.percent, 0),
                              "%)")) %>% 
  #pretty formatting
  mutate(numbers = paste0(round(particle.L.master.50),
                              " (",
                              round(particle.L.master.05, 2),
                              " to ",
                              round(particle.L.master.95, 2),
                              ")"))

sensitivity.analysis.manta.oxidative
##    aboveThreshold particle.L.master.05 particle.L.master.25
## 1 belowThreshold1                   33                   33
## 2 aboveThreshold1                    0                    0
## 3 aboveThreshold2                    0                    0
## 4 aboveThreshold3                    0                    0
## 5 aboveThreshold4                    0                    0
##   particle.L.master.50 particle.L.master.75 particle.L.master.95
## 1                   32                   32                   30
## 2                    1                    1                    3
## 3                    0                    0                    1
## 4                    0                    0                    1
## 5                    0                    0                    0
##   particle.L.master.50.percent particle.L.master.05.percent
## 1                   0.96969697                            1
## 2                   0.03030303                            0
## 3                   0.00000000                            0
## 4                   0.00000000                            0
## 5                   0.00000000                            0
##   particle.L.master.95.percent       percentages       numbers
## 1                   0.90909091 97% (100% to 91%) 32 (33 to 30)
## 2                   0.09090909     3% (0% to 9%)    1 (0 to 3)
## 3                   0.03030303     0% (0% to 3%)    0 (0 to 1)
## 4                   0.03030303     0% (0% to 3%)    0 (0 to 1)
## 5                   0.00000000     0% (0% to 0%)    0 (0 to 0)
6.0.2.2.2.2 EXPORT EXCEEDANCES
write.csv(sensitivity.analysis.manta.oxidative ,
          "output/data/surface_water_exceedances_sensitivity_analysis_manta_oxidative.csv"
          )
6.0.2.2.3 Bar Plots
barplot <- sensitivity.analysis.manta %>% 
  # replace_na(list(rel.freq_Conc = 0,
  #                 rel.freq_conc.lower.95 = 0,
  #                 rel.freq_conc.upper.95 = 0)) %>% 
  mutate(frequency = as.numeric(particle.L.master.50.percent)) %>% 
  mutate(frequency_lower = as.numeric(particle.L.master.05.percent)) %>%
  mutate(frequency.25 = as.numeric(particle.L.master.25.percent)) %>% 
  mutate(frequency.75 = as.numeric(particle.L.master.75.percent)) %>% 
  mutate(frequency_upper = as.numeric(particle.L.master.95.percent)) %>% 
  mutate(threshold = case_when(aboveThreshold == "belowThreshold1" ~ "< Threshold One",
                               aboveThreshold == "aboveThreshold1" ~ "> Threshold One",
                               aboveThreshold == "aboveThreshold2" ~ "> Threshold Two",
                               aboveThreshold == "aboveThreshold3" ~ "> Threshold Three",
                               aboveThreshold == "aboveThreshold4" ~ "> Threshold Four")) %>% 
  ggplot(aes(x = factor(threshold, level = c("< Threshold One",
                                             "> Threshold One",
                                             "> Threshold Two",
                                             "> Threshold Three",
                                             "> Threshold Four")))) +
  geom_col(aes(y = frequency, fill = threshold)) +
  #95th
  geom_errorbar(aes(ymin = frequency_lower, ymax = frequency_upper),
                linetype = "dashed", width = 1.0, alpha = 0.7) +
  #25th and 75th percetnile
  geom_errorbar(aes(ymin = frequency.25, ymax = frequency.75),
                linetype = "solid", width = 0.5, alpha = 1) +
  scale_y_continuous(limits = c(0,1),
                     labels = scales::percent) +
  scale_fill_manual(values = c("< Threshold One" = "#b6d7a8", #green
                                "> Threshold One" = "#fcc523", #yellow
                               "> Threshold Two" = "#bf8345", #orange
                                "> Threshold Three" = "#e06665", # red
                               "> Threshold Four" = "#ac5784" #purple
                               )) +

  coord_flip() +
  ylab("Percentage of Samples Exceeding Threshold") +
  theme.type +
  theme(axis.title.y = element_blank(),
        axis.text.y = element_text(color = c("#90ab85", #green
                               "#fcc523", #yellow
                               "#bf8345", #orange
                                "#e06665", # red
                               "#ac5784" #purple
                               ),
                               face = "bold",
                               size = 18),
        legend.position = "none"
        )

barplot

6.0.2.2.3.1 ARRANGE
bar_cdf <- ggarrange(barplot, sfBayECDF_sensitivity,
          nrow = 2,
          labels = c("A", "B"))

bar_cdf

ggsave(plot = bar_cdf,
       filename = "bar_cdf.jpeg",
       path = "output/figures/", 
       width = 10, height = , units = "in",
       bg = "white",
       dpi = 300)

6.0.2.3 Group-by Location

6.0.2.3.1 Food Dilution
6.0.2.3.1.1 MANTA only
#count samples
manta.count.location <- sensitivity %>% 
    filter(!str_detect(sampleID, "DUP")) %>% 
    filter(!str_detect(sampleID, "blank")) %>% 
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  filter(Sampling.apparatus == "Manta Trawl") %>%
  group_by(locationNew) %>% 
  summarize(total = n())

manta.count.location
## # A tibble: 5 x 2
##   locationNew               total
##   <fct>                     <int>
## 1 Central Bay                  12
## 2 general                       7
## 3 Lower South Bay               6
## 4 National Marine Sanctuary    23
## 5 South Bay                     8
sensitivity.analysis.location_inter <- sfBay_aligned %>% 
  filter(!str_detect(sampleID, "DUP")) %>% 
    filter(!str_detect(sampleID, "blank")) %>% 
    # remove non-bay samples
    #filter(!locationNew %in% c("National Marine Sanctuary")) %>% 
  #fix-up names to match probabilistic values
  dplyr::select(-Conc) %>% 
  rename(Conc = particle.L.master.50,
         conc.combined.upper.95 = particle.L.master.95,
         conc.combined.lower.95 = particle.L.master.05) %>% 
  
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  filter(Sampling.apparatus == "Manta Trawl") %>%
  #just select concentrations
  dplyr::select(c(Conc, #conc.upper.68,
                  conc.combined.upper.95, 
                  #conc.upper.99, conc.lower.68, 
                  conc.combined.lower.95, 
                  #conc.lower.99,
                  locationNew)) %>% 
  #make long data
  pivot_longer(starts_with("conc"), names_to = "alignment", values_to = "conc") %>% 

  #pivot_longer(-c(locationNew),names_to = "alignment", values_to = "conc") %>% 
  #mutate(alignment = factor(alignment)) %>% 
  group_by(alignment, locationNew) %>% 
  summarize(n = n(),
            belowThreshold1 = sum(conc < Threshold1_food),
            aboveThreshold1 = sum(conc > Threshold1_food),
            aboveThreshold2 = sum(conc > Threshold2_food),
            aboveThreshold3 = sum(conc > Threshold3_food),
            aboveThreshold4 = sum(conc > Threshold4_food))

  #transpose
t_sensitivity.analysis.location <- data.table::transpose(sensitivity.analysis.location_inter)
# get row and colnames in order
colnames(t_sensitivity.analysis.location) <- rownames(sensitivity.analysis.location_inter)
rownames(t_sensitivity.analysis.location) <- colnames(sensitivity.analysis.location_inter)

t_2 <- t_sensitivity.analysis.location %>% janitor::row_to_names(row_number = 1)
rownames(t_2) <- colnames(sensitivity.analysis.location_inter[-1])

sensitivity.analysis.location_t2 <- t_2 %>% tibble::rownames_to_column("aboveThreshold")

sensitivity.analysis.location <- sensitivity.analysis.location_t2# %>% 
  #filter(!aboveThreshold == "n") %>% 
 # mutate_at(c(2:4), as.numeric) %>% 
  #mutate(Conc.percent = Conc / manta.count[1,],
   #      conc.lower.95.percent = conc.lower.95 / manta.count[1,],
    #     conc.upper.95.percent = conc.upper.95 / manta.count[1,])
  

sensitivity.analysis.location
##    aboveThreshold        Conc  Conc.1          Conc.2                    Conc.3
## 1     locationNew Central Bay general Lower South Bay National Marine Sanctuary
## 2               n          12       7               6                        23
## 3 belowThreshold1           2       4               1                        19
## 4 aboveThreshold1          10       3               5                         4
## 5 aboveThreshold2           5       0               0                         0
## 6 aboveThreshold3           3       0               0                         0
## 7 aboveThreshold4           1       0               0                         0
##      Conc.4 conc.combined.lower.95 conc.combined.lower.95.1
## 1 South Bay            Central Bay                  general
## 2         8                     12                        7
## 3         3                      8                        7
## 4         5                      4                        0
## 5         2                      1                        0
## 6         1                      1                        0
## 7         0                      0                        0
##   conc.combined.lower.95.2  conc.combined.lower.95.3 conc.combined.lower.95.4
## 1          Lower South Bay National Marine Sanctuary                South Bay
## 2                        6                        23                        8
## 3                        6                        23                        6
## 4                        0                         0                        2
## 5                        0                         0                        0
## 6                        0                         0                        0
## 7                        0                         0                        0
##   conc.combined.upper.95 conc.combined.upper.95.1 conc.combined.upper.95.2
## 1            Central Bay                  general          Lower South Bay
## 2                     12                        7                        6
## 3                      0                        0                        0
## 4                     12                        7                        6
## 5                     10                        3                        5
## 6                      9                        3                        4
## 7                      5                        0                        0
##    conc.combined.upper.95.3 conc.combined.upper.95.4
## 1 National Marine Sanctuary                South Bay
## 2                        23                        8
## 3                         2                        0
## 4                        21                        8
## 5                         5                        6
## 6                         3                        4
## 7                         0                        2
6.0.2.3.1.2 EXPORT EXCEEDANCES
write.csv(sensitivity.analysis.location ,
          "output/data/sensitivity.analysis.location.csv"
          )
6.0.2.3.2 Oxidative Stress
6.0.2.3.2.1 MANTA only
#count samples
manta.count.location <- sensitivity %>% 
    filter(!str_detect(sampleID, "DUP")) %>% 
    filter(!str_detect(sampleID, "blank")) %>% 
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  filter(Sampling.apparatus == "Manta Trawl") %>%
  group_by(locationNew) %>% 
  summarize(total = n())

manta.count.location
## # A tibble: 5 x 2
##   locationNew               total
##   <fct>                     <int>
## 1 Central Bay                  12
## 2 general                       7
## 3 Lower South Bay               6
## 4 National Marine Sanctuary    23
## 5 South Bay                     8
sensitivity.analysis.location_inter <- sfBay_aligned %>% 
    filter(!str_detect(sampleID, "DUP")) %>% 
    filter(!str_detect(sampleID, "blank")) %>% 
  #fix-up names to match probabilistic values
  dplyr::select(-Conc) %>% 
  rename(Conc = particle.L.master.50,
         conc.combined.upper.95 = particle.L.master.95,
         conc.combined.lower.95 = particle.L.master.05) %>% 
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  filter(Sampling.apparatus == "Manta Trawl") %>%
  #just select concentrations
  dplyr::select(c(Conc, #conc.upper.68,
                  conc.combined.upper.95, 
                  #conc.upper.99, conc.lower.68, 
                  conc.combined.lower.95, 
                  #conc.lower.99,
                  locationNew)) %>% 
  #make long data
  pivot_longer(starts_with("conc"), names_to = "alignment", values_to = "conc") %>% 

  #pivot_longer(-c(locationNew),names_to = "alignment", values_to = "conc") %>% 
  #mutate(alignment = factor(alignment)) %>% 
  group_by(alignment, locationNew) %>% 
  summarize(n = n(),
            belowThreshold1 = sum(conc < Threshold1_oxidative.stress),
            aboveThreshold1 = sum(conc > Threshold1_oxidative.stress),
            aboveThreshold2 = sum(conc > Threshold2_oxidative.stress),
            aboveThreshold3 = sum(conc > Threshold3_oxidative.stress),
            aboveThreshold4 = sum(conc > Threshold4_oxidative.stress))

  #transpose
t_sensitivity.analysis.location <- data.table::transpose(sensitivity.analysis.location_inter)
# get row and colnames in order
colnames(t_sensitivity.analysis.location) <- rownames(sensitivity.analysis.location_inter)
rownames(t_sensitivity.analysis.location) <- colnames(sensitivity.analysis.location_inter)

t_2 <- t_sensitivity.analysis.location %>% janitor::row_to_names(row_number = 1)
rownames(t_2) <- colnames(sensitivity.analysis.location_inter[-1])

sensitivity.analysis.location_t2 <- t_2 %>% tibble::rownames_to_column("aboveThreshold")

sensitivity.analysis.manta.location.oxidative <- sensitivity.analysis.location_t2 %>% 
  filter(!aboveThreshold == "n")# %>% 
 # mutate_at(c(2:4), as.numeric) %>% 
  #mutate(Conc.percent = Conc / manta.count[1,],
   #      conc.lower.95.percent = conc.lower.95 / manta.count[1,],
    #     conc.upper.95.percent = conc.upper.95 / manta.count[1,])
  

sensitivity.analysis.manta.location.oxidative
##    aboveThreshold        Conc  Conc.1          Conc.2                    Conc.3
## 1     locationNew Central Bay general Lower South Bay National Marine Sanctuary
## 2 belowThreshold1          11       7               6                        23
## 3 aboveThreshold1           1       0               0                         0
## 4 aboveThreshold2           0       0               0                         0
## 5 aboveThreshold3           0       0               0                         0
## 6 aboveThreshold4           0       0               0                         0
##      Conc.4 conc.combined.lower.95 conc.combined.lower.95.1
## 1 South Bay            Central Bay                  general
## 2         8                     12                        7
## 3         0                      0                        0
## 4         0                      0                        0
## 5         0                      0                        0
## 6         0                      0                        0
##   conc.combined.lower.95.2  conc.combined.lower.95.3 conc.combined.lower.95.4
## 1          Lower South Bay National Marine Sanctuary                South Bay
## 2                        6                        23                        8
## 3                        0                         0                        0
## 4                        0                         0                        0
## 5                        0                         0                        0
## 6                        0                         0                        0
##   conc.combined.upper.95 conc.combined.upper.95.1 conc.combined.upper.95.2
## 1            Central Bay                  general          Lower South Bay
## 2                      9                        7                        6
## 3                      3                        0                        0
## 4                      1                        0                        0
## 5                      1                        0                        0
## 6                      0                        0                        0
##    conc.combined.upper.95.3 conc.combined.upper.95.4
## 1 National Marine Sanctuary                South Bay
## 2                        23                        8
## 3                         0                        0
## 4                         0                        0
## 5                         0                        0
## 6                         0                        0
6.0.2.3.2.2 EXPORT EXCEEDANCES
write.csv(sensitivity.analysis.manta.location.oxidative ,
          "output/data/sensitivity.analysis.manta.location.oxidative.csv"
          )
6.0.2.3.3 Manta vs. Grab
#ECDF by System
sfBayECDF_sensitivity_grab_manta <- sensitivity %>% 
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  filter(particle.L.master > 0) %>% 
  #just select concentrations
  #dplyr::select(c(Conc, conc.plus1, conc.plus2, conc.plus3, conc.minus1, conc.minus2, conc.minus3)) %>% 
  #make long data
 # pivot_longer(everything()) %>% 
  #mutate(name = as.factor(name)) %>% 
  ggplot() +
 # stat_ecdf(aes(x = value, color = name),
  #          geom = "point", size = 1, alpha = 0.5) +
  stat_ecdf(aes(x = Conc, color = Sampling.apparatus),geom = "step", linetype = 'solid', alpha = 0.7, size = 2.5) +
  #color
  # scale_color_manual(name = "Alignment Uncertanties",
  #                    values = c("Conc" = "#e8ffff",
  #                               "conc.minus1" = "#bfe6ff",
  #                               "conc.plus1" = "#bfe6ff",
  #                               "conc.minus2" = "#8cd3ff",
  #                               "conc.plus2" = "#8cd3ff",
  #                               "conc.minus3" = "#009dff",
  #                               "conc.plus3" = "#009dff"),
  #                    labels = c("Mean", 
  #                               "68th Percentile",
  #                               "68th Percentile",
  #                               "95th Percentile",
  #                               "95th Percentile",
  #                               "99.7th Percentile",
  #                               "99.7th Percentile")) +
  # ##Food Dilution thresholds
  geom_vline(xintercept = Threshold1_food, linetype = 'dashed', color = "#66a182", size = 1.3) +
  geom_vline(xintercept = Threshold4_food, linetype = 'dashed', 
             color = "#d1495b",
             size = 1.3) +
  geom_text(label = "Food Dilution T1", color = "#66a182" , x = Threshold1_food, y = 0.15, size = 6)+
   geom_text(label = "Food Dilution T4", color = "#d1495b", 
            x = Threshold4_food,
            y = 0.25, size = 6)+
  ###Oxidative Stress thresholds
  geom_vline(xintercept = Threshold1_oxidative.stress, linetype = 'dashed',
             color = "#66a182",#"#00798c",
             size = 1.3) +
  geom_vline(xintercept = Threshold4_oxidative.stress, linetype = 'dashed',
             color = "#d1495b",
             size = 1.3) +
  geom_text(label = "Oxidative Stress T1", color = "#66a182",#'#edae49',
            x = Threshold1_oxidative.stress - 0.8 * Threshold1_oxidative.stress, 
            y = 0.45, size = 6) +
  geom_text(label = "Oxidative Stress T4", color = "#d1495b", x =
              Threshold4_oxidative.stress - 0.8 * Threshold4_oxidative.stress, 
            y = 0.55, size = 6)+
    ylab("Cumulative Density") +
  xlab("Particles/L") +
  #xlab(paste0("Particles/L (" ,x1D_set, " to ", x2D_set, "um)"))+
  scale_y_continuous(labels = scales::percent)+
  coord_trans(x = "log10") +
  scale_x_continuous(breaks = scales::trans_breaks("log10", function(x) 10^x),labels = comma_signif)+
  #annotation_logticks(sides = "b")+ #log scale rick marks on bottom
  theme.type #+
 # theme(legend.title = element_blank(),
  #      legend.position = "none")
  #labs(title = "Global Surface Water Marine Microplastics Concentrations",
   #    subtitle = paste("Particles/L corrected to:",x1D_set, "to", x2D_set, "um"),
    #   caption = paste("Concentration data from Adams et al (2019): 23 studies, 57 sampling locations, n = 377; corrected for size ranges. Alpha = ",alpha))
 
sfBayECDF_sensitivity_grab_manta

##### Wet Vs Dry

#ECDF by System
sfBayECDF_wetDry <- sfBay_new %>% 
  filter(!str_detect(sampleID, "DUP")) %>% 
    filter(!str_detect(sampleID, "blank")) %>% 
    # remove non-bay samples
    filter(!locationNew %in% c("National Marine Sanctuary")) %>% 
  filter(source == "SFEI") %>% 
  filter(particle.L.master > 0) %>% 
  filter(sample.matrix.specific == "surface water",
         Sampling.apparatus == "Manta Trawl"
         ) %>% 
  #ggplot(aes(color = interaction(season, Sampling.apparatus, sep = "-"))) +
  ggplot(aes(color = season)) +
  #aligned
  stat_ecdf(aes(x = particle.L.master.50),geom = "step", linetype = 'solid', alpha = 0.7, size = 2.5) +
  #unaligned
  #stat_ecdf(aes(x = unaligned.particle.L.master),geom = "step", linetype = 'solid', alpha = 0.2, size = 2.5) +
  #color
  scale_color_manual(values = hcl(h = c(65,245),c = 100, l = 65)) +
  
  geom_vline(xintercept = Threshold1_food, linetype = 'dashed', color = "#85a17d", size = 1) +
  geom_text(label = "Threshold One", color = "#85a17d" , x = Threshold1_food, y = 0.10, size = 6)+
  geom_vline(xintercept = Threshold2_food, linetype = 'dashed', color = "#ebbb38", size = 1) +
  geom_text(label = "Threshold Two", color = "#ebbb38" , x = Threshold2_food, y = 0.20, size = 6)+
  geom_vline(xintercept = Threshold3_food, linetype = 'dashed', color = "#fd8060", size = 1) +
  geom_text(label = "Threshold Three", color = "#fd8060" , x = Threshold3_food, y = 0.30, size = 6)+
  geom_vline(xintercept = Threshold4_food, linetype = 'dashed', color = "#E84258", size = 1) +
  geom_text(label = "Threshold Four", color = "#E84258",  x = Threshold4_food, y = 0.40, size = 6)+
  #Aesthetics  
  ylab("Cumulative Density") +
  labs(color = "Season") +
  xlab("Particles/L (1 to 5,000 µm)") +
  #xlab(paste0("Particles/L (" ,x1D_set, " to ", x2D_set, "um)"))+
  scale_y_continuous(labels = scales::percent)+
  coord_trans(x = "log10") +
  scale_x_continuous(breaks = scales::trans_breaks("log10", function(x) 10^x),labels = comma_signif,
                     limits = c(0.001, 100))+
  #annotation_logticks(sides = "b")+ #log scale rick marks on bottom
  theme.type +
  theme(legend.position = c(0.2, 0.6),
        legend.background = element_rect(fill = "white", color = "black"),
        legend.text = element_text(size = 18))

sfBayECDF_wetDry

ggsave(plot = sfBayECDF_wetDry,
       filename = "sfBayECDF_wetDry.jpeg",
       path = "output/figures/", 
       width = 10, height = 6, units = "in",
       bg = "white",
       dpi = 300)
sensitivity.analysis.manta_season <- sfBay_aligned %>% 
   # remove non-bay samples
  filter(!locationNew %in% c("National Marine Sanctuary")) %>% 
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  filter(Sampling.apparatus == "Manta Trawl") %>%
  #just select concentrations
  dplyr::select(c(particle.L.master.50,
                  particle.L.master.05,
                  particle.L.master.95,
                  particle.L.master.25,
                  particle.L.master.75,
                  season
                  )) %>% 
  #make long data
  pivot_longer(cols = starts_with("particle"),
               names_to = "confidence", 
               values_to = "conc") %>% 
  #mutate(alignment = factor(alignment)) %>% 
  group_by(season, confidence) %>% 
  summarize(n = n(),
            belowThreshold1 = sum(conc < Threshold1_food),
            aboveThreshold1 = sum(conc > Threshold1_food),
            aboveThreshold2 = sum(conc > Threshold2_food),
            aboveThreshold3 = sum(conc > Threshold3_food),
            aboveThreshold4 = sum(conc > Threshold4_food)) %>% 
  #percentages
  mutate(belowThreshold1_percent = belowThreshold1 / n,
         aboveThreshold2_percent = aboveThreshold2 / n,
         aboveThreshold3_percent = aboveThreshold3 / n,
         aboveThreshold4_percent = aboveThreshold4 / n)
write.csv(sensitivity.analysis.manta_season,
          "output/data/sensitivity_analysis_manta_season.csv")

sensitivity.analysis.manta_season
## # A tibble: 10 x 12
## # Groups:   season [2]
##    season confidence           n belowThreshold1 aboveThreshold1 aboveThreshold2
##    <fct>  <chr>            <int>           <int>           <int>           <int>
##  1 dry    particle.L.mast~    17              15               2               0
##  2 dry    particle.L.mast~    17              12               5               0
##  3 dry    particle.L.mast~    17               8               9               2
##  4 dry    particle.L.mast~    17               2              15               5
##  5 dry    particle.L.mast~    17               0              17              10
##  6 wet    particle.L.mast~    17              13               4               1
##  7 wet    particle.L.mast~    17               7              10               2
##  8 wet    particle.L.mast~    17               2              15               5
##  9 wet    particle.L.mast~    17               0              17               8
## 10 wet    particle.L.mast~    17               0              17              15
## # ... with 6 more variables: aboveThreshold3 <int>, aboveThreshold4 <int>,
## #   belowThreshold1_percent <dbl>, aboveThreshold2_percent <dbl>,
## #   aboveThreshold3_percent <dbl>, aboveThreshold4_percent <dbl>

6.1 Comparison to other studies

 sfBay_aligned %>% 
   # remove non-bay samples
  filter(!locationNew %in% c("National Marine Sanctuary")) %>% 
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  filter(Sampling.apparatus == "Manta Trawl") %>%
  #just select concentrations
  dplyr::select(c(particle.L.master.50,
                  particle.L.master.05,
                  particle.L.master.95,
                  particle.L.master.25,
                  particle.L.master.75,
                  season
                  )) %>% 
  #make long data
  pivot_longer(cols = starts_with("particle"),
               names_to = "confidence", 
               values_to = "conc") %>% 
  #mutate(alignment = factor(alignment)) %>% 
  group_by(confidence) %>% 
  summarize(n = n(),
            above50 = sum(conc > 50), #values from Everaert et al (2020)
            above0.255 = sum(conc > 0.255),
            above56 = sum(conc > 56),
            above1e6 = sum(conc > 1E-6),
            above0.0679 = sum(conc > 0.0679)) %>% 
  mutate(above50_percent = above50 / n,
         above0.255_percent = above0.255 / n,
         above56_percent = above56 / n,
         above1e6_percent = above1e6 / n,
         above0.0679_percent = above0.0679 / n) 
## # A tibble: 5 x 12
##   confidence               n above50 above0.255 above56 above1e6 above0.0679
##   <chr>                <int>   <int>      <int>   <int>    <int>       <int>
## 1 particle.L.master.05    34       0          7       0       34          18
## 2 particle.L.master.25    34       0         19       0       34          29
## 3 particle.L.master.50    34       1         26       1       34          33
## 4 particle.L.master.75    34       1         33       1       34          34
## 5 particle.L.master.95    34       5         34       3       34          34
## # ... with 5 more variables: above50_percent <dbl>, above0.255_percent <dbl>,
## #   above56_percent <dbl>, above1e6_percent <dbl>, above0.0679_percent <dbl>

6.2 No Fiber Correction

#ECDF by System
sfBayECDF_sensitivity.noFiberCorrection <- sfBay_aligned %>% 
  # remove non-bay samples
  filter(!locationNew %in% c("National Marine Sanctuary")) %>% 
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  filter(Sampling.apparatus == "Manta Trawl") %>% 
  filter(particle.L.master > 0) %>% 
  #just select concentrations
  #dplyr::select(c(Conc, conc.combined.upper.95, conc.combined.lower.95)) %>% 
  dplyr::select(c(particle.L.master.50.noFiberCorrection,
                  particle.L.master.05.noFiberCorrection,
                  particle.L.master.95.noFiberCorrection,
                  particle.L.master.25.noFiberCorrection,
                  particle.L.master.75.noFiberCorrection)) %>% 
  #make long data
  pivot_longer(everything()) %>% 
  mutate(name = as.factor(name)) %>% 
  mutate(percentile = case_when(grepl("50", name) ~ "50th Percentile",
                                grepl("95", name) ~ "95th Percentile",
                                grepl("25", name) ~ "25th Percentile",
                                grepl("05", name) ~ "5th Percentile",
                                grepl("75", name) ~ "75th Percentile",
                                name == "Conc" ~ "Mean")) %>% 
  ggplot() +
 # stat_ecdf(aes(x = value, color = name),
  #          geom = "point", size = 1, alpha = 0.5) +
  stat_ecdf(aes(x = value, color = percentile),geom = "step", linetype = 'solid', alpha = 1, size = 1) +
  #color
  scale_color_manual(name = "Probabilistic Uncertainty",
                     values = c("5th Percentile" = "#8cd3ff",
                                "25th Percentile" = "#05619c",
                                "50th Percentile" = "#012740",
                                "75th Percentile" = "#05619c",
                                "95th Percentile" = "#8cd3ff"
                              ),
                     labels = c("5th Percentile",
                                "25th Percentile",
                                "50th Percentile",
                                "75th Percentile",
                                "95th Percentile"
                                )) +
  # ##Food Dilution thresholds #
   geom_vline(xintercept = Threshold1_food, linetype = 'dashed', color = "#fcc523", size = 1.5) +
   geom_text(label = "Threshold One", color = "#fcc523" , x = Threshold1_food, y = 0.10, size = 6)+
  geom_vline(xintercept = Threshold2_food, linetype = 'dashed', color = "#bf8345", size = 1.5) +
  geom_text(label = "Threshold Two", color = "#bf8345" , x = Threshold2_food, y = 0.20, size = 6)+
   geom_vline(xintercept = Threshold3_food, linetype = 'dashed', color = "#e06665", size = 1.5) +
   geom_text(label = "Threshold Three", color = "#e06665" , x = Threshold3_food, y = 0.30, size = 6)+
   geom_vline(xintercept = Threshold4_food, linetype = 'dashed', color = "#ac5784", size = 1.5) +
  geom_text(label = "Threshold Four", color = "#ac5784",  x = Threshold4_food, y = 0.40, size = 6)+
    ylab("Cumulative Density") +
  xlab("Surface Water Particles/L (aligned to 1 to 5,000 µm)") +
  #xlab(paste0("Particles/L (" ,x1D_set, " to ", x2D_set, "um)"))+
  scale_y_continuous(labels = scales::percent)+
  coord_trans(x = "log10") +
  scale_x_continuous(#breaks = scales::trans_breaks("log10", function(x) 10^x,n = 10),
                     breaks = c(0.001, 0.005, 0.01, 0.05, 0.1, 0.5, 1, 5, 10, 50, 100),
                     labels = comma_signif,
                     limits = c(1e-3,100))+
  annotation_logticks(scaled = FALSE)+ #log scale rick marks on bottom
  theme.type +
  theme(legend.title = element_blank(),
        legend.position = c(0.1,0.6),
        legend.key.size = unit(0.6, 'cm'))
 
sfBayECDF_sensitivity.noFiberCorrection

sensitivity.analysis.manta_inter.noFiberCorrection <- sfBay_aligned %>% 
   # remove non-bay samples
  filter(!locationNew %in% c("National Marine Sanctuary")) %>% 
  filter(source == "SFEI") %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  filter(Sampling.apparatus == "Manta Trawl") %>%
  #just select concentrations
  dplyr::select(c(particle.L.master.50.noFiberCorrection,
                  particle.L.master.05.noFiberCorrection,
                  particle.L.master.95.noFiberCorrection,
                  particle.L.master.25.noFiberCorrection,
                  particle.L.master.75.noFiberCorrection
                  )) %>% 
  #make long data
  pivot_longer(everything(),names_to = "alignment", values_to = "conc") %>% 
  #mutate(alignment = factor(alignment)) %>% 
  group_by(alignment) %>% 
  summarize(n = n(),
            belowThreshold1 = sum(conc < Threshold1_food),
            aboveThreshold1 = sum(conc > Threshold1_food),
            aboveThreshold2 = sum(conc > Threshold2_food),
            aboveThreshold3 = sum(conc > Threshold3_food),
            aboveThreshold4 = sum(conc > Threshold4_food))

  #transpose
t_sensitivity.analysis.manta.noFiberCorrection <- data.table::transpose(sensitivity.analysis.manta_inter.noFiberCorrection)
# get row and colnames in order
colnames(t_sensitivity.analysis.manta.noFiberCorrection) <- rownames(sensitivity.analysis.manta_inter.noFiberCorrection)
rownames(t_sensitivity.analysis.manta.noFiberCorrection) <- colnames(sensitivity.analysis.manta_inter.noFiberCorrection)

t_2.noFiberCorrection <- t_sensitivity.analysis.manta.noFiberCorrection %>% janitor::row_to_names(row_number = 1)
rownames(t_2.noFiberCorrection) <- colnames(sensitivity.analysis.manta_inter.noFiberCorrection[-1])

sensitivity.analysis.manta_t2.noFiberCorrection <- t_2.noFiberCorrection %>% tibble::rownames_to_column("aboveThreshold")

sensitivity.analysis.manta.noFiberCorrection <- sensitivity.analysis.manta_t2.noFiberCorrection %>% 
  filter(!aboveThreshold == "n") %>% 
  mutate_at(c(2:6), as.numeric) %>% 
  mutate(particle.L.master.05.percent = particle.L.master.05.noFiberCorrection / manta.count[1,],
         particle.L.master.25.percent = particle.L.master.25.noFiberCorrection / manta.count[1,],
         particle.L.master.50.percent = particle.L.master.50.noFiberCorrection / manta.count[1,],
         particle.L.master.75.percent = particle.L.master.75.noFiberCorrection / manta.count[1,],
         particle.L.master.95.percent = particle.L.master.95.noFiberCorrection / manta.count[1,])

sensitivity.analysis.manta.noFiberCorrection
##    aboveThreshold particle.L.master.05.noFiberCorrection
## 1 belowThreshold1                                     33
## 2 aboveThreshold1                                      1
## 3 aboveThreshold2                                      0
## 4 aboveThreshold3                                      0
## 5 aboveThreshold4                                      0
##   particle.L.master.25.noFiberCorrection particle.L.master.50.noFiberCorrection
## 1                                     31                                     27
## 2                                      3                                      7
## 3                                      1                                      1
## 4                                      1                                      1
## 5                                      0                                      0
##   particle.L.master.75.noFiberCorrection particle.L.master.95.noFiberCorrection
## 1                                     24                                     14
## 2                                     10                                     20
## 3                                      1                                      3
## 4                                      1                                      2
## 5                                      0                                      1
##   particle.L.master.05.percent particle.L.master.25.percent
## 1                   1.00000000                   0.93939394
## 2                   0.03030303                   0.09090909
## 3                   0.00000000                   0.03030303
## 4                   0.00000000                   0.03030303
## 5                   0.00000000                   0.00000000
##   particle.L.master.50.percent particle.L.master.75.percent
## 1                   0.81818182                   0.72727273
## 2                   0.21212121                   0.30303030
## 3                   0.03030303                   0.03030303
## 4                   0.03030303                   0.03030303
## 5                   0.00000000                   0.00000000
##   particle.L.master.95.percent
## 1                   0.42424242
## 2                   0.60606061
## 3                   0.09090909
## 4                   0.06060606
## 5                   0.03030303
6.2.0.0.1 Bar Plots
barplot.noFiberCorrection <- sensitivity.analysis.manta.noFiberCorrection %>% 
  # replace_na(list(rel.freq_Conc = 0,
  #                 rel.freq_conc.lower.95 = 0,
  #                 rel.freq_conc.upper.95 = 0)) %>% 
  mutate(frequency = as.numeric(particle.L.master.50.percent)) %>% 
  mutate(frequency_lower = as.numeric(particle.L.master.05.percent)) %>%
  mutate(frequency.25 = as.numeric(particle.L.master.25.percent)) %>% 
  mutate(frequency.75 = as.numeric(particle.L.master.75.percent)) %>% 
  mutate(frequency_upper = as.numeric(particle.L.master.95.percent)) %>% 
  mutate(threshold = case_when(aboveThreshold == "belowThreshold1" ~ "< Threshold One",
                               aboveThreshold == "aboveThreshold1" ~ "> Threshold One",
                               aboveThreshold == "aboveThreshold2" ~ "> Threshold Two",
                               aboveThreshold == "aboveThreshold3" ~ "> Threshold Three",
                               aboveThreshold == "aboveThreshold4" ~ "> Threshold Four")) %>% 
  ggplot(aes(x = factor(threshold, level = c("< Threshold One",
                                             "> Threshold One",
                                             "> Threshold Two",
                                             "> Threshold Three",
                                             "> Threshold Four")))) +
  geom_col(aes(y = frequency, fill = threshold)) +
  #95th
  geom_errorbar(aes(ymin = frequency_lower, ymax = frequency_upper),
                linetype = "dashed", width = 1.0, alpha = 0.7) +
  #25th and 75th percetnile
  geom_errorbar(aes(ymin = frequency.25, ymax = frequency.75),
                linetype = "solid", width = 0.5, alpha = 1) +
  scale_y_continuous(limits = c(0,1),
                     labels = scales::percent) +
  scale_fill_manual(values = c("< Threshold One" = "#b6d7a8", #green
                                "> Threshold One" = "#fcc523", #yellow
                               "> Threshold Two" = "#bf8345", #orange
                                "> Threshold Three" = "#e06665", # red
                               "> Threshold Four" = "#ac5784" #purple
                               )) +

  coord_flip() +
  ylab("Percentage of Samples Exceeding Threshold") +
  theme.type +
  theme(axis.title.y = element_blank(),
        axis.text.y = element_text(color = c("#90ab85", #green
                               "#fcc523", #yellow
                               "#bf8345", #orange
                                "#e06665", # red
                               "#ac5784" #purple
                               ),
                               face = "bold",
                               size = 18),
        legend.position = "none"
        )

barplot.noFiberCorrection

6.2.0.0.1.1 ARRANGE
bar_cdf.noFiberCorrection <- ggarrange(barplot.noFiberCorrection, sfBayECDF_sensitivity.noFiberCorrection,
          nrow = 2,
          labels = c("A", "B"))

bar_cdf.noFiberCorrection

ggsave(plot = bar_cdf.noFiberCorrection,
       filename = "bar_cdf_noFiberCorrection.jpeg",
       path = "output/figures/", 
       width = 10, height = , units = "in",
       bg = "white",
       dpi = 300)

6.2.1 Risk Characterization Histogram (SFBay)

#generate plot
dfSFEI_exceedance %>% 
 # filter(Conc > 0) %>% 
  filter(Sample.Type == "sample") %>% 
  ggplot(aes(x = Conc, fill = aboveThreshold))+
  geom_histogram(aes(y = ..count../sum(..count..)),bins = 38, alpha = 0.9, position = "identity") +
  #geom_text(aes(x = Threshold1- 0.5*Threshold1, y = 0.045), label = paste(Threshold1,"particles/L"),  color = "goldenrod2") +
  #geom_text(aes(x = Threshold1- 0.5*Threshold1, y = 0.055), label = ("Threshold1"),  color = "goldenrod2") +
  geom_vline(xintercept = Threshold1, linetype = 'dashed', color = 'goldenrod2', size = 1.3) +
  geom_vline(xintercept = Threshold2, linetype = 'dashed', color = 'tomato1', size = 1.3) +
  geom_vline(xintercept = Threshold3, linetype = 'dashed', color =  'mediumvioletred', size = 1.3) +
  geom_vline(xintercept = Threshold4, linetype = 'dashed', color =  'gray33', size = 1.3) +
  #geom_text(label = "Threshold 1", color = 'goldenrod2', x = log10(Threshold1) - 0.8*log10(Threshold1), y = 0.055, size = 6)+
#   geom_text(label = "Threshold 2", color = 'tomato1', x = log10(Threshold2) - 0.8*log10(Threshold2), y = 0.055, size = 6)+
 #  geom_text(label = "Threshold 3", color = 'mediumvioletred', x = log10(Threshold3) - 0.8*log10(Threshold3), y = 0.055, size = 6)+
  # geom_text(label = "Threshold 4", color = 'gray33', x = Threshold4 - 0.8*log10(Threshold4), y = 0.055, size = 6)+
  scale_x_continuous(breaks = scales::trans_breaks("log10", function(x) 10^x),labels = comma_signif, trans = "log10")+
  annotation_logticks(sides = "b")+ #log scale rick marks on bottom
  #coord_cartesian(xlim = c(0,100000000)) +
  #scale_x_continuous(labels = scales::scientific) +
   xlab(paste0("Particles/L (" ,x1D_set, " to ", x2D_set, "μm)")) +
  scale_y_continuous(name = "Relative Density", labels = scales::percent)+
  scale_fill_manual(values = c("below Threshold 1"= "cyan3", 
                               "above Threshold 1" = "goldenrod2", 
                               "above Threshold 2" = "tomato1",
                               "above Threshold 3" = "violetred4", 
                               "above Threshold 4" = "gray33")) +
  labs(title = "San Francisco Bay Surface Water Marine Microplastics Concentrations",
       subtitle = paste("Particles/L corrected to:",x1D_set, "to", x2D_set, "um"),
       caption = paste("n = 107; corrected for size, blanks. Alpha = ",alpha.marine))+
  theme.type +
  theme(#legend.position = "none",
    plot.title = element_text(hjust = 0.5, size = 20),
        axis.title = element_text(size = 16),
        axis.text =  element_text(size = 16),
        legend.text = element_text(size =14),
        legend.title = element_blank(),
        plot.subtitle = element_text(hjust = 0.5, size = 14))

### ECDF (SF Bay) ##### All: Aligned vs. Unaligned

vals <- c("Unaligned" = "black", "Aligned" = "deepskyblue")

#ECDF by System
sfBayECDF <- sfBay_new %>% 
  # remove non-bay samples
  filter(!locationNew %in% c("National Marine Sanctuary")) %>% 
  filter(source == "SFEI") %>% 
  drop_na(particle.L.master) %>% 
  filter(particle.L.master > 0.0) %>% 
    filter(System %in% c("Ocean", "Estuary")) %>% 
  ggplot() +
     #unaligned
  stat_ecdf(aes(x = unaligned.particle.L.master, color = "Unaligned"),
            geom = "point", size = 1, alpha = 0.5) +
  stat_ecdf(aes(x = unaligned.particle.L.master, color = "Unaligned"),geom = "step", linetype = 'solid', alpha = 0.3, size = 1) +
  #aligned
  stat_ecdf(aes(x = particle.L.master.50, color = "Aligned"),
            geom = "point", size = 1, alpha = 0.5) +
  stat_ecdf(aes(x = particle.L.master.50, color = "Aligned"),geom = "step", linetype = 'solid', alpha = 0.3, size = 1) +
  #color
  scale_color_manual(name = "alignment",
                     values = vals) +
  # ##Food Dilution thresholds
  geom_vline(xintercept = Threshold1_food, linetype = 'dashed', color = "#66a182", size = 1.3) +
  #geom_vline(xintercept = Threshold2, linetype = 'dashed', color = "#66a182" , size = 1.3) +
  #geom_vline(xintercept = Threshold3, linetype = 'dashed', color =     '#edae49', size = 1.3) +
  geom_vline(xintercept = Threshold4_food, linetype = 'dashed', 
             color = "#d1495b",
             size = 1.3) +
  geom_text(label = "Food Dilution T1", color = "#66a182" , x = Threshold1_food, y = 0.15, size = 6)+
 # geom_text(label = "Threshold 2", color = "#66a182" , x = Threshold2, y = 0.22, size = 6)+
  #geom_text(label = "Threshold 3", color = '#edae49', x = Threshold3, y = 0.35, size = 6)+
  geom_text(label = "Food Dilution T4", color = "#d1495b", 
            x = Threshold4_food,
            y = 0.25, size = 6)+
  ###Oxidative Stress thresholds
  geom_vline(xintercept = Threshold1_oxidative.stress, linetype = 'dashed',
             color = "#66a182",#"#00798c",
             size = 1.3) +
  geom_vline(xintercept = Threshold4_oxidative.stress, linetype = 'dashed',
             color = "#d1495b",
             size = 1.3) +
  geom_text(label = "Oxidative Stress T1", color = "#66a182",#'#edae49',
            x = Threshold1_oxidative.stress - 0.8 * Threshold1_oxidative.stress, 
            y = 0.45, size = 6) +
  geom_text(label = "Oxidative Stress T4", color = "#d1495b", x =
              Threshold4_oxidative.stress - 0.8 * Threshold4_oxidative.stress, 
            y = 0.55, size = 6)+
    ylab("Cumulative Density") +
  xlab("Particles/L") +
  #xlab(paste0("Particles/L (" ,x1D_set, " to ", x2D_set, "um)"))+
  scale_y_continuous(labels = scales::percent)+
  coord_trans(x = "log10") +
  scale_x_continuous(breaks = scales::trans_breaks("log10", function(x) 10^x),labels = comma_signif)+
  #annotation_logticks(sides = "b")+ #log scale rick marks on bottom
  theme.type +
  theme(legend.title = element_blank(),
        legend.position = c(0.2,0.8),
        legend.text = element_text(size = 12, face = "bold"),
        legend.background = element_rect(fill = "white", color = "black"),
        legend.key.size = unit(1.3, 'cm'))
  #labs(title = "Global Surface Water Marine Microplastics Concentrations",
   #    subtitle = paste("Particles/L corrected to:",x1D_set, "to", x2D_set, "um"),
    #   caption = paste("Concentration data from Adams et al (2019): 23 studies, 57 sampling locations, n = 377; corrected for size ranges. Alpha = ",alpha))
 
sfBayECDF

ggsave(plot =sfBayECDF,
       filename = "sfBayECDF.jpeg",
       path = "output/figures/", 
       width = 10, height = 6, units = "in",
       bg = "white",
       dpi = 300)
6.2.1.0.1 Sampling Technique x Alignment
# need to pivot wide data into long format to easily plot
sfBayECDF_alignedXtechnique <- sfBay_new %>% 
  filter(source == "SFEI") %>% 
  filter(particle.L.master > 0) %>% 
  filter(sample.matrix.specific == "surface water") %>% 
  dplyr::select(c(sampleID, unaligned.particle.L.master, particle.L.master, Sampling.apparatus)) %>% 
  pivot_longer(-c(sampleID, Sampling.apparatus), names_to = "alignment", values_to = "concentration") %>% 
  #rename for easy plotting
  mutate(alignment_pretty = case_when(alignment == "particle.L.master" ~ "Aligned",
                                      alignment == "unaligned.particle.L.master" ~ "Unaligned")) %>% 
## PLOTTING ##
  ggplot(aes(x = concentration, color = interaction(Sampling.apparatus, alignment_pretty, sep = " x "))) +
  #aligned
  stat_ecdf(geom = "step", linetype = 'solid', size = 1) +
  #unaligned
  #color
  scale_color_manual(values = hcl(c(15,195,15,195),100,65, alpha=c(1,1, 0.3,0.3))) +
  #scale_alpha_manual(name = "alignment",
   #                 values = c(0.2,1)) +
  # ##Food Dilution thresholds
  geom_vline(xintercept = Threshold1_food, linetype = 'dashed', color = "#85a17d", size = 1) +
  geom_text(label = "Food Dilution T1", color = "#85a17d" , x = Threshold1_food, y = 0.10, size = 5)+
  geom_vline(xintercept = Threshold2_food, linetype = 'dashed', color = "#ebbb38", size = 1) +
  geom_text(label = "Food Dilution T2", color = "#ebbb38" , x = Threshold2_food, y = 0.15, size = 5)+
  geom_vline(xintercept = Threshold3_food, linetype = 'dashed', color = "#fd8060", size = 1) +
  geom_text(label = "Food Dilution T3", color = "#fd8060" , x = Threshold3_food, y = 0.20, size = 5)+
  geom_vline(xintercept = Threshold4_food, linetype = 'dashed', color = "#E84258", size = 1) +
  geom_text(label = "Food Dilution T4", color = "#E84258",  x = Threshold4_food, y = 0.25, size = 5)+
  #aesthetics
    ylab("Cumulative Density") +
  labs(color = "Sampling technique x Alignment") +
  xlab("Particles/L") +
  #xlab(paste0("Particles/L (" ,x1D_set, " to ", x2D_set, "um)"))+
  scale_y_continuous(labels = scales::percent)+
  coord_trans(x = "log10") +
  scale_x_continuous(breaks = scales::trans_breaks("log10", function(x) 10^x),labels = comma_signif)+
  #annotation_logticks(sides = "b")+ #log scale rick marks on bottom
  theme.type +
  theme(legend.position = "bottom")
  #labs(title = "Global Surface Water Marine Microplastics Concentrations",
   #    subtitle = paste("Particles/L corrected to:",x1D_set, "to", x2D_set, "um"),
    #   caption = paste("Concentration data from Adams et al (2019): 23 studies, 57 sampling locations, n = 377; corrected for size ranges. Alpha = ",alpha))
 
sfBayECDF_alignedXtechnique

ggsave(plot = sfBayECDF_alignedXtechnique,
       filename = "sfBayECDF_alignedXtechnique.jpeg",
       path = "output/figures/", 
       width = 10, height = 6, units = "in",
       scale = 1.2,
       bg = "white",
       dpi = 300)

#Compare fish concentrations and ambient Two-Way ANOVA needed!!

#group by location name and compare averages/sds by ambient and fish
all_data <- sfBay_aligned %>%
  filter(!Sampling.apparatus == "1-L grab") %>% 
  mutate(particles.any = case_when(
    sample.matrix == "water" ~ particle.L.master,
    sample.matrix == "fish" ~ particle.fish.master,
    sample.matrix == "sediment" ~ particles.kg.master
    ))
  
all_data_summary <- all_data %>% 
  group_by(Sampling.location, sample.matrix) %>% 
  summarize(mean = mean(particles.any),
            sd = sd(particles.any),
            n = n())


all_data_summary %>% 
  drop_na() %>% 
  ggplot(aes(x = Sampling.location,y = mean, color = sample.matrix))+
  geom_point() +
  scale_y_log10()

##

ANOVA <- aov(data = all_data, particles.any ~ sample.matrix * Sampling.location)

anova_table <- summary(ANOVA)

anova_table

new <- all_data %>%  filter(Sampling.location %in% c("South Bay", "Lower South Bay", "Central Bay"))

# library(apaTables)
# apa.aov.table(dv = particles.any,
#                iv1 = sample.matrix,
#                iv2 = Sampling.location,
#                data = new,
#                filename = "output/ANOVA.doc",
#              #  show.marginal.means = TRUE
#                )

6.3 Boxplots by matrix

violin_matrix <- all_data %>% 
  drop_na(Sampling.location) %>% 
   filter(!Sampling.apparatus == "1-L grab") %>% 
  filter(Sampling.location %in% c("South Bay", "Lower South Bay", "Central Bay")) %>% 
  mutate(location = fct_reorder(Sampling.location, desc(particles.any))) %>%
  ggplot(aes(y = location, x = particles.any, fill = sample.matrix)) +
  geom_violin(position = "identity", trim = FALSE) +
  geom_boxplot(width=0.1, color = "white", position = "identity") +
  scale_fill_futurama(name = "Sample Matrix",
                       labels = c("Fish (particles/fish)",
                                  "Sediment (particles/kg)",
                                  "Surface Water (particles/L)")) +
  scale_x_log10(name = "Aligned Particle Concentrations (matrix-dependent)",
                  breaks = scales::trans_breaks("log10", function(x) 10^x),
        labels = scales::trans_format("log10", scales::math_format(10^.x))) +
  theme.type +
  theme(legend.position = "bottom",
        axis.title.y = element_blank())


ggsave(plot = violin_matrix,
       filename = "violin_matrix.jpeg",
       path = "output/figures/", 
       width = 11, height = 9, units = "in",
       bg = "white",
       dpi = 300)

violin_matrix

sfBay_aligned %>% 
  filter(!sampleID == "CB9 Jan 11 Total") %>% 
  filter(!Sampling.apparatus == "1-L grab") %>% 
  mutate(scaled.particle.L.master = scale(particle.L.master),
         scaled.fish.master = scale(particle.fish.master),
         scaled.particles.kg.master = scale(particles.kg.master)) %>% 
  mutate(particles.any.scaled = case_when(
    sample.matrix == "water" ~ scaled.particle.L.master,
    sample.matrix == "fish" ~ scaled.fish.master,
    sample.matrix == "sediment" ~ scaled.particles.kg.master
    )) %>% 
  drop_na(Sampling.location) %>% 
 ggplot(aes(y = particles.any.scaled, x = Sampling.location, color = sample.matrix)) +
  geom_boxplot() +
  #scale_y_log10()+
  theme.type 

7 Map

7.1 Libraries

# code as we would normally do in R script
library(sf)
library(readr)
library(viridis)
library(USAboundaries)
library(rnaturalearth)
library(GSODR)
library(cowplot)
library(mapview)      # interactive maps!
library(ggspatial)
library(basemaps)
library(mapedit)

mapviewOptions(fgb = FALSE)

7.2 Basemap

7.3 Data Prep

# get CA county boundary
ca_co <- USAboundaries::us_counties(resolution = "high", states = "CA")

# convert point data
spatial_risk <- sfBay_aligned %>% 
  filter(!sampleID == "CB9 Jan 11 Total") %>% 
  filter(Sampling.apparatus == "Manta Trawl") %>% 
  drop_na(c(particle.L.master.50, latitude, longitude)) %>% 
   mutate(latitude = case_when(
    sampleID == "SPB3 Aug 21" ~ 38.03, #probably a typo...
    TRUE ~ as.numeric(as.character(latitude))
  )) %>%
  mutate(longitude_num = as.numeric(as.character(longitude)),
         latitude_num = as.numeric(as.character(latitude))) %>% 
  drop_na(c(latitude_num, longitude_num)) %>% 
  droplevels() %>% 
  st_as_sf(coords = c("longitude_num", "latitude_num"), 
           crs = 4326) # WGS 84

#inspect
st_crs(spatial_risk)
## Coordinate Reference System:
##   User input: EPSG:4326 
##   wkt:
## GEOGCRS["WGS 84",
##     DATUM["World Geodetic System 1984",
##         ELLIPSOID["WGS 84",6378137,298.257223563,
##             LENGTHUNIT["metre",1]]],
##     PRIMEM["Greenwich",0,
##         ANGLEUNIT["degree",0.0174532925199433]],
##     CS[ellipsoidal,2],
##         AXIS["geodetic latitude (Lat)",north,
##             ORDER[1],
##             ANGLEUNIT["degree",0.0174532925199433]],
##         AXIS["geodetic longitude (Lon)",east,
##             ORDER[2],
##             ANGLEUNIT["degree",0.0174532925199433]],
##     USAGE[
##         SCOPE["Horizontal component of 3D system."],
##         AREA["World."],
##         BBOX[-90,-180,90,180]],
##     ID["EPSG",4326]]
st_crs(ca_co) # need to transform to CA Albers
## Coordinate Reference System:
##   User input: EPSG:4326 
##   wkt:
## GEOGCRS["WGS 84",
##     DATUM["World Geodetic System 1984",
##         ELLIPSOID["WGS 84",6378137,298.257223563,
##             LENGTHUNIT["metre",1]]],
##     PRIMEM["Greenwich",0,
##         ANGLEUNIT["degree",0.0174532925199433]],
##     CS[ellipsoidal,2],
##         AXIS["geodetic latitude (Lat)",north,
##             ORDER[1],
##             ANGLEUNIT["degree",0.0174532925199433]],
##         AXIS["geodetic longitude (Lon)",east,
##             ORDER[2],
##             ANGLEUNIT["degree",0.0174532925199433]],
##     USAGE[
##         SCOPE["Horizontal component of 3D system."],
##         AREA["World."],
##         BBOX[-90,-180,90,180]],
##     ID["EPSG",4326]]

##Interactive Map

mapping_data <- spatial_risk_thresholds %>% 
  dplyr::select(c(sampleID,
                  Sampling.location,
                  season,
                  particle.L.master.05,
                  particle.L.master.50,
                  particle.L.master.95,
                  threshold
                  ))

interactive <- mapview(mapping_data, zcol="threshold") # this may take a minute because of duplication
#tmlwidgets::saveWidget(widget = interactive, file = "output/map.html", selfcontained = T)
interactive

7.4 Basemap with ggmap

7.5 Ggplot

## assign labels ##
labels <- data.frame(name = c("San \n Francisco \n Bay",
                              "San \n Pablo \n Bay",
                              "Drakes \n Bay",
                              "Gulf \n of the \n Farallones"),
                     lat = c(37.65, #SF Bay
                                  38.058, #San Pablo Bay
                                  37.987,
                                  37.77 #Gulf of the Farallones
                     ),
                     long = c(-122.286, #SF Bay
                                   -122.387, #San Pablo Bay
                                   -122.899, #drakes bay
                                   -122.925 #Gulf of the Farallones
                                   ))
labels <- labels %>% 
  st_as_sf(coords = c("long", "lat"), 
           crs = 4326)
# add points
risk_smc <- ggmap(sf_basemap) + 
 
#geom_sf(data = sf)# +
   geom_sf(data = #sfBay_aligned, 
           spatial_risk_thresholds,
           aes(#color = threshold, 
               fill= threshold,
               shape = threshold), alpha = 0.65,
           size = 4,
           inherit.aes = FALSE,
           #shape = 21,
           color = "gray40") +
  coord_sf(crs = st_crs(4326)) +
  scale_color_manual(name = "Threshold", values = color_scale) +
  scale_fill_manual(name = "Threshold", values = color_scale) +
  scale_shape_manual(name = "Threshold", values = shape_scale) +
   #add labels for bay
  geom_sf_text(aes(label = name),
                data = labels,
                inherit.aes = FALSE,
               color = "gray10",
               fontface = "italic") +
  annotation_scale(location = "bl") + #add scale
  annotation_north_arrow(location = "bl", #north arrow
                         pad_x =  unit(0.5, "in"), pad_y = unit(0.5, "in"), #shift it so it doesn't plot on top of scale bar
                         style = north_arrow_fancy_orienteering()) + #change style of north arrow
  labs(legend = "Threshold") +
  xlab("Longitude (NAD83)") +
  ylab("Latitude (NAD83)") +
  #ggtitle("Microplastics Risk Exceedances in San Francisco Bay") +
  theme.type +
  theme(
        legend.background = element_rect(fill = "white", color = "black"),
        legend.position = c(0.85, 0.87),
        legend.key.size = unit(0.5, 'cm'))

ggsave(plot = risk_smc,
       filename = "risk_smc.jpeg",
       path = "output/figures/", 
       width = 9, height = 8, units = "in",
       bg = "white",
       dpi = 300)

#plot
risk_smc